Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:21:02 (1473057): wrapper (7.7.26015): starting
17:21:02 (1473057): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 17:21:02] Arguments: --nthreads 4
[2025-12-16 17:21:02] Threads: 4
[2025-12-16 17:21:02] Checking for CVMFS
[2025-12-16 17:21:02] No cvmfs_config command found, will try listing directly
[2025-12-16 17:21:02] CVMFS is ok
[2025-12-16 17:21:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 17:21:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 17:21:02] Further information can be found at the LHC@home message board.
[2025-12-16 17:21:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 17:21:02] Checking for apptainer binary...
[2025-12-16 17:21:02] which: no apptainer in ((null))
[2025-12-16 17:21:02] apptainer is not installed, using version from CVMFS
[2025-12-16 17:21:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 17:21:02] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-12-16 17:21:02] apptainer works
[2025-12-16 17:21:02] Set ATHENA_PROC_NUMBER=4
[2025-12-16 17:21:02] Set ATHENA_CORE_NUMBER=4
[2025-12-16 17:21:03] Starting ATLAS job with PandaID=6929531997
[2025-12-16 17:21:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 20:16:30]  *** The last 200 lines of the pilot log: ***
[2025-12-16 20:16:30] 2025-12-16 19:14:30,557 | INFO     | time since job start (10393s) is within the limit (174528.0s)
[2025-12-16 20:16:30] 2025-12-16 19:14:32,562 | INFO     | time since job start (10395s) is within the limit (174528.0s)
[2025-12-16 20:16:30] 2025-12-16 19:14:32,874 | INFO     | monitor loop #708: job 0:6929531997 is in state 'finished'
[2025-12-16 20:16:30] 2025-12-16 19:14:32,874 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 20:16:30] 2025-12-16 19:14:34,568 | INFO     | time since job start (10397s) is within the limit (174528.0s)
[2025-12-16 20:16:30] 2025-12-16 19:14:35,378 | INFO     | monitor loop #709: job 0:6929531997 is in state 'finished'
[2025-12-16 20:16:30] 2025-12-16 19:14:35,378 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 20:16:30] 2025-12-16 19:14:36,570 | INFO     | time since job start (10399s) is within the limit (174528.0s)
[2025-12-16 20:16:30] 2025-12-16 19:14:36,571 | INFO     | 10400s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-16 20:16:30] 2025-12-16 19:14:36,931 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 20:16:30] 2025-12-16 19:14:36,952 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2736.1041171875
[2025-12-16 20:16:30] 2025-12-16 19:14:36,977 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6929531997/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 20:16:30] 2025-12-16 19:14:36,978 | INFO     | extracted standard info from prmon json
[2025-12-16 20:16:30] 2025-12-16 19:14:36,978 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 20:16:30] 2025-12-16 19:14:36,978 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 20:16:30] 2025-12-16 19:14:36,979 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 20:16:30] 2025-12-16 19:14:36,979 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 20:16:30] 2025-12-16 19:14:36,983 | INFO     | fitting pss+swap vs Time
[2025-12-16 20:16:30] 2025-12-16 19:14:36,983 | INFO     | sum of square deviations: 1523386702.5
[2025-12-16 20:16:30] 2025-12-16 19:14:36,984 | INFO     | sum of deviations: 9759212886.500004
[2025-12-16 20:16:30] 2025-12-16 19:14:36,984 | INFO     | mean x: 1765907267.5
[2025-12-16 20:16:30] 2025-12-16 19:14:36,984 | INFO     | mean y: 2312940.4529411765
[2025-12-16 20:16:30] 2025-12-16 19:14:36,984 | INFO     | intersect: -11310549993.868235
[2025-12-16 20:16:30] 2025-12-16 19:14:36,985 | INFO     | chi2: 1.2821347327277037
[2025-12-16 20:16:30] 2025-12-16 19:14:36,985 | INFO     | sum of square deviations: 1392881930.0
[2025-12-16 20:16:30] 2025-12-16 19:14:36,986 | INFO     | sum of deviations: 9379875754.999998
[2025-12-16 20:16:30] 2025-12-16 19:14:36,986 | INFO     | mean x: 1765907115.0
[2025-12-16 20:16:30] 2025-12-16 19:14:36,986 | INFO     | mean y: 2312497.090909091
[2025-12-16 20:16:30] 2025-12-16 19:14:36,986 | INFO     | intersect: -11889570782.327105
[2025-12-16 20:16:30] 2025-12-16 19:14:36,987 | INFO     | chi2: 1.283003294332197
[2025-12-16 20:16:30] 2025-12-16 19:14:36,987 | INFO     | current chi2=1.283003294332197 (change=-0.06774339562936449 %)
[2025-12-16 20:16:30] 2025-12-16 19:14:36,987 | INFO     | right removable region: 164
[2025-12-16 20:16:30] 2025-12-16 19:14:36,987 | INFO     | sum of square deviations: 1392881930.0
[2025-12-16 20:16:30] 2025-12-16 19:14:36,988 | INFO     | sum of deviations: -8677104210.0
[2025-12-16 20:16:30] 2025-12-16 19:14:36,989 | INFO     | mean x: 1765907420.0
[2025-12-16 20:16:30] 2025-12-16 19:14:36,989 | INFO     | mean y: 2334086.6363636362
[2025-12-16 20:16:30] 2025-12-16 19:14:36,989 | INFO     | intersect: 11003239747.428617
[2025-12-16 20:16:30] 2025-12-16 19:14:36,989 | INFO     | chi2: 0.056938334532294105
[2025-12-16 20:16:30] 2025-12-16 19:14:36,989 | INFO     | current chi2=0.056938334532294105 (change=95.55909897151297 %)
[2025-12-16 20:16:30] 2025-12-16 19:14:36,989 | INFO     | sum of square deviations: 1270051720.0
[2025-12-16 20:16:30] 2025-12-16 19:14:36,990 | INFO     | sum of deviations: -5665166898.5
[2025-12-16 20:16:30] 2025-12-16 19:14:36,991 | INFO     | mean x: 1765907572.5
[2025-12-16 20:16:30] 2025-12-16 19:14:36,991 | INFO     | mean y: 2330324.30625
[2025-12-16 20:16:30] 2025-12-16 19:14:36,991 | INFO     | intersect: 7879301764.128785
[2025-12-16 20:16:30] 2025-12-16 19:14:36,991 | INFO     | chi2: 0.04650000461904144
[2025-12-16 20:16:30] 2025-12-16 19:14:36,991 | INFO     | current chi2=0.04650000461904144 (change=18.332692726255075 %)
[2025-12-16 20:16:30] 2025-12-16 19:14:36,991 | INFO     | left removable region: 20
[2025-12-16 20:16:30] 2025-12-16 19:14:36,992 | INFO     | sum of square deviations: 925859220.0
[2025-12-16 20:16:30] 2025-12-16 19:14:36,993 | INFO     | sum of deviations: 1499725778.5
[2025-12-16 20:16:30] 2025-12-16 19:14:36,993 | INFO     | mean x: 1765907694.5
[2025-12-16 20:16:30] 2025-12-16 19:14:36,993 | INFO     | mean y: 2320034.4375
[2025-12-16 20:16:30] 2025-12-16 19:14:36,993 | INFO     | intersect: -2858133514.7458763
[2025-12-16 20:16:30] 2025-12-16 19:14:36,993 | INFO     | chi2: 0.00021650109551781988
[2025-12-16 20:16:30] 2025-12-16 19:14:36,993 | INFO     | current memory leak: 1.62 B/s (using 144 data points, chi2=0.00)
[2025-12-16 20:16:30] 2025-12-16 19:14:36,994 | INFO     | could have reported an average CPU frequency of 2706 MHz (9 samples)
[2025-12-16 20:16:30] 2025-12-16 19:14:36,994 | INFO     | ..............................
[2025-12-16 20:16:30] 2025-12-16 19:14:36,994 | INFO     | . Timing measurements:
[2025-12-16 20:16:30] 2025-12-16 19:14:36,994 | INFO     | . get job = 0 s
[2025-12-16 20:16:30] 2025-12-16 19:14:36,994 | INFO     | . initial setup = 1 s
[2025-12-16 20:16:30] 2025-12-16 19:14:36,995 | INFO     | . payload setup = 9 s
[2025-12-16 20:16:30] 2025-12-16 19:14:36,995 | INFO     | . stage-in = 0 s
[2025-12-16 20:16:30] 2025-12-16 19:14:36,995 | INFO     | . payload execution = 10357 s
[2025-12-16 20:16:30] 2025-12-16 19:14:36,995 | INFO     | . stage-out = 0 s
[2025-12-16 20:16:30] 2025-12-16 19:14:36,995 | INFO     | . log creation = 0 s
[2025-12-16 20:16:30] 2025-12-16 19:14:36,995 | INFO     | ..............................
[2025-12-16 20:16:30] 2025-12-16 19:14:37,097 | INFO     | 
[2025-12-16 20:16:30] 2025-12-16 19:14:37,097 | INFO     | job summary report
[2025-12-16 20:16:30] 2025-12-16 19:14:37,097 | INFO     | --------------------------------------------------
[2025-12-16 20:16:30] 2025-12-16 19:14:37,098 | INFO     | PanDA job id: 6929531997
[2025-12-16 20:16:30] 2025-12-16 19:14:37,098 | INFO     | task id: 47886831
[2025-12-16 20:16:30] 2025-12-16 19:14:37,098 | INFO     | errors: (none)
[2025-12-16 20:16:30] 2025-12-16 19:14:37,098 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 20:16:30] 2025-12-16 19:14:37,098 | INFO     | pilot state: finished 
[2025-12-16 20:16:30] 2025-12-16 19:14:37,098 | INFO     | transexitcode: 0
[2025-12-16 20:16:30] 2025-12-16 19:14:37,098 | INFO     | exeerrorcode: 0
[2025-12-16 20:16:30] 2025-12-16 19:14:37,098 | INFO     | exeerrordiag: 
[2025-12-16 20:16:30] 2025-12-16 19:14:37,098 | INFO     | exitcode: 0
[2025-12-16 20:16:30] 2025-12-16 19:14:37,098 | INFO     | exitmsg: OK
[2025-12-16 20:16:30] 2025-12-16 19:14:37,099 | INFO     | cpuconsumptiontime: 40355 s
[2025-12-16 20:16:30] 2025-12-16 19:14:37,099 | INFO     | nevents: 400
[2025-12-16 20:16:30] 2025-12-16 19:14:37,099 | INFO     | neventsw: 0
[2025-12-16 20:16:30] 2025-12-16 19:14:37,099 | INFO     | pid: 1497130
[2025-12-16 20:16:30] 2025-12-16 19:14:37,099 | INFO     | pgrp: 1497130
[2025-12-16 20:16:30] 2025-12-16 19:14:37,099 | INFO     | corecount: 4
[2025-12-16 20:16:30] 2025-12-16 19:14:37,099 | INFO     | event service: False
[2025-12-16 20:16:30] 2025-12-16 19:14:37,099 | INFO     | sizes: {0: 2283829, 1: 2284028, 7: 2284290, 11: 2284318, 10370: 2313528, 10371: 2313527, 10372: 2322733, 10373: 2322789, 10381: 2323047}
[2025-12-16 20:16:30] 2025-12-16 19:14:37,099 | INFO     | --------------------------------------------------
[2025-12-16 20:16:30] 2025-12-16 19:14:37,099 | INFO     | 
[2025-12-16 20:16:30] 2025-12-16 19:14:37,100 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-12-16 20:16:30] 2025-12-16 19:14:37,133 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 20:16:30] 2025-12-16 19:14:37,134 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 20:16:30] 2025-12-16 19:14:37,134 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 20:16:30] 2025-12-16 19:14:37,134 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 20:16:30] 2025-12-16 19:14:37,134 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 20:16:30] 2025-12-16 19:14:37,134 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 20:16:30] 2025-12-16 19:14:37,134 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 20:16:30] 2025-12-16 19:14:37,135 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 20:16:30] 2025-12-16 19:14:37,135 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 20:16:30] 2025-12-16 19:14:37,135 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 20:16:30] 2025-12-16 19:14:37,135 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 20:16:30] 2025-12-16 19:14:37,135 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 20:16:30] 2025-12-16 19:14:37,135 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 20:16:30] 2025-12-16 19:14:37,135 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 20:16:30] 2025-12-16 19:14:37,135 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 20:16:30] 2025-12-16 19:14:37,135 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 20:16:30] 2025-12-16 19:14:37,135 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 20:16:30] 2025-12-16 19:14:37,136 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 20:16:30] 2025-12-16 19:14:37,136 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 20:16:30] 2025-12-16 19:14:37,136 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 20:16:30] 2025-12-16 19:14:37,136 | INFO     | job 6929531997 has completed (purged errors)
[2025-12-16 20:16:30] 2025-12-16 19:14:37,136 | INFO     | overall cleanup function is called
[2025-12-16 20:16:30] 2025-12-16 19:14:38,146 | INFO     | --- collectZombieJob: --- 10, [1497130]
[2025-12-16 20:16:30] 2025-12-16 19:14:38,146 | INFO     | zombie collector waiting for pid 1497130
[2025-12-16 20:16:30] 2025-12-16 19:14:38,146 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 20:16:30] 2025-12-16 19:14:38,147 | INFO     | collected zombie processes
[2025-12-16 20:16:30] 2025-12-16 19:14:38,147 | INFO     | will attempt to kill all subprocesses of pid=1497130
[2025-12-16 20:16:30] 2025-12-16 19:14:38,957 | INFO     | process IDs to be killed: [1497130] (in reverse order)
[2025-12-16 20:16:30] 2025-12-16 19:14:39,219 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 20:16:30] 2025-12-16 19:14:39,219 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 20:16:30] 2025-12-16 19:14:39,258 | INFO     | did not find any defunct processes belonging to 1497130
[2025-12-16 20:16:30] 2025-12-16 19:14:39,296 | INFO     | did not find any defunct processes belonging to 1497130
[2025-12-16 20:16:30] 2025-12-16 19:14:39,297 | INFO     | ready for new job
[2025-12-16 20:16:30] 2025-12-16 19:14:39,297 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 20:16:30] 2025-12-16 19:14:39,300 | INFO     | ***************************************
[2025-12-16 20:16:30] 2025-12-16 19:14:39,300 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 20:16:30] 2025-12-16 19:14:39,300 | INFO     | ***************************************
[2025-12-16 20:16:30] 2025-12-16 19:14:39,300 | INFO     | 
[2025-12-16 20:16:30] 2025-12-16 19:14:39,309 | INFO     | architecture information:
[2025-12-16 20:16:30] 2025-12-16 19:14:39,309 | INFO     | executing command: cat /etc/os-release
[2025-12-16 20:16:30] 2025-12-16 19:14:39,336 | INFO     | cat /etc/os-release:
[2025-12-16 20:16:30] NAME="CentOS Linux"
[2025-12-16 20:16:30] VERSION="7 (Core)"
[2025-12-16 20:16:30] ID="centos"
[2025-12-16 20:16:30] ID_LIKE="rhel fedora"
[2025-12-16 20:16:30] VERSION_ID="7"
[2025-12-16 20:16:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 20:16:30] ANSI_COLOR="0;31"
[2025-12-16 20:16:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 20:16:30] HOME_URL="https://www.centos.org/"
[2025-12-16 20:16:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 20:16:30] 
[2025-12-16 20:16:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 20:16:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 20:16:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 20:16:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 20:16:30] 
[2025-12-16 20:16:30] 2025-12-16 19:14:39,336 | INFO     | ***************************************
[2025-12-16 20:16:30] 2025-12-16 19:14:39,840 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-12-16 20:16:30] 2025-12-16 19:14:39,865 | INFO     | sufficient remaining disk space (3340061638656 B)
[2025-12-16 20:16:30] 2025-12-16 19:14:39,865 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 20:16:30] 2025-12-16 19:14:39,866 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 20:16:30] 2025-12-16 19:14:39,866 | INFO     | update_server=False
[2025-12-16 20:16:30] 2025-12-16 19:14:39,866 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 20:16:30] 2025-12-16 19:14:39,866 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 20:16:30] 2025-12-16 19:14:39,867 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 20:16:30] 2025-12-16 19:14:39,867 | INFO     | aborting loop
[2025-12-16 20:16:30] 2025-12-16 19:14:40,623 | INFO     | all job control threads have been joined
[2025-12-16 20:16:30] 2025-12-16 19:14:40,629 | INFO     | all payload control threads have been joined
[2025-12-16 20:16:30] 2025-12-16 19:14:40,838 | INFO     | all data control threads have been joined
[2025-12-16 20:16:30] 2025-12-16 19:14:40,868 | INFO     | [job] retrieve thread has finished
[2025-12-16 20:16:30] 2025-12-16 19:14:40,873 | INFO     | [job] job monitor thread has finished
[2025-12-16 20:16:30] 2025-12-16 19:14:40,897 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 20:16:30] 2025-12-16 19:14:41,068 | INFO     | [payload] failed_post thread has finished
[2025-12-16 20:16:30] 2025-12-16 19:14:41,132 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 20:16:30] 2025-12-16 19:14:41,264 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 20:16:30] 2025-12-16 19:14:41,629 | INFO     | [job] control thread has finished
[2025-12-16 20:16:30] 2025-12-16 19:14:41,631 | INFO     | [payload] control thread has finished
[2025-12-16 20:16:30] 2025-12-16 19:14:41,827 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 20:16:30] 2025-12-16 19:14:41,843 | INFO     | [data] control thread has finished
[2025-12-16 20:16:30] 2025-12-16 19:14:41,903 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 20:16:30] 2025-12-16 19:14:41,950 | INFO     | [data] copytool_in thread has finished
[2025-12-16 20:16:30] 2025-12-16 19:14:41,972 | INFO     | [payload] validate_post thread has finished
[2025-12-16 20:16:30] 2025-12-16 19:14:42,108 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 20:16:30] 2025-12-16 19:14:42,222 | INFO     | [job] validate thread has finished
[2025-12-16 20:16:30] 2025-12-16 19:14:42,900 | INFO     | [data] copytool_out thread has finished
[2025-12-16 20:16:30] 2025-12-16 19:14:43,114 | INFO     | [job] queue monitor thread has finished
[2025-12-16 20:16:30] 2025-12-16 19:14:43,874 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 20:16:30] 2025-12-16 19:15:10,675 | INFO     | PID=1479984 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 20:16:30] 2025-12-16 19:15:10,675 | INFO     | .. there are 8 such processes running
[2025-12-16 20:16:30] 2025-12-16 19:15:10,676 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 20:16:30] 2025-12-16 19:15:10,676 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 20:16:30] 2025-12-16 19:15:10,676 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 20:16:30] 2025-12-16 19:15:33,951 | INFO     | [monitor] cgroup control has ended
[2025-12-16 20:16:30] 2025-12-16 19:15:36,055 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22586560214848)>', '<ExcThread(monitor, started 22586308105984)>']
[2025-12-16 20:16:30] 2025-12-16 19:15:36,806 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 20:16:30] 2025-12-16 19:15:36,806 | INFO     | [monitor] control thread has ended
[2025-12-16 20:16:30] 2025-12-16 19:15:41,080 | INFO     | all workflow threads have been joined
[2025-12-16 20:16:30] 2025-12-16 19:15:41,080 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 20:16:30] 2025-12-16 19:15:41,080 | INFO     | traces error code: 0
[2025-12-16 20:16:30] 2025-12-16 19:15:41,080 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 20:16:30] 2025-12-16 19:15:41,271 [wrapper] ==== pilot stdout END ====
[2025-12-16 20:16:30] 2025-12-16 19:15:41,275 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 20:16:30] 2025-12-16 19:15:41,279 [wrapper] pilotpid: 1479984
[2025-12-16 20:16:30] 2025-12-16 19:15:41,283 [wrapper] Pilot exit status: 0
[2025-12-16 20:16:30] 2025-12-16 19:15:41,298 [wrapper] pandaids: 6929531997
[2025-12-16 20:16:30] 2025-12-16 19:15:41,490 [wrapper] cleanup supervisor_pilot 1789031 1479985
[2025-12-16 20:16:30] 2025-12-16 19:15:41,495 [wrapper] Test setup, not cleaning
[2025-12-16 20:16:30] 2025-12-16 19:15:41,499 [wrapper] apfmon messages muted
[2025-12-16 20:16:30] 2025-12-16 19:15:41,503 [wrapper] ==== wrapper stdout END ====
[2025-12-16 20:16:30] 2025-12-16 19:15:41,506 [wrapper] ==== wrapper stderr END ====
[2025-12-16 20:16:30]  *** Error codes and diagnostics ***
[2025-12-16 20:16:30]     "exeErrorCode": 0,
[2025-12-16 20:16:30]     "exeErrorDiag": "",
[2025-12-16 20:16:30]     "pilotErrorCode": 0,
[2025-12-16 20:16:30]     "pilotErrorDiag": "",
[2025-12-16 20:16:30]  *** Listing of results directory ***
[2025-12-16 20:16:30] total 339832
[2025-12-16 20:16:30] -rwx------ 1 boinc boinc     36322 Dec 15 09:08 runpilot2-wrapper.sh
[2025-12-16 20:16:30] -rw-r--r-- 1 boinc boinc      5112 Dec 15 09:08 queuedata.json
[2025-12-16 20:16:30] -rw-r--r-- 1 boinc boinc    579449 Dec 15 09:08 pilot3.tar.gz
[2025-12-16 20:16:30] -rw-r--r-- 1 boinc boinc       100 Dec 16 17:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 20:16:30] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 17:20 run_atlas
[2025-12-16 20:16:30] -rw-r--r-- 1 boinc boinc       105 Dec 16 17:20 job.xml
[2025-12-16 20:16:30] -rw-r--r-- 2 boinc boinc 190343191 Dec 16 17:21 EVNT.47886829._000299.pool.root.1
[2025-12-16 20:16:30] -rw-r--r-- 1 boinc boinc      6692 Dec 16 17:21 init_data.xml
[2025-12-16 20:16:30] drwxrwx--x 2 boinc boinc      4096 Dec 16 17:21 shared
[2025-12-16 20:16:30] -rw-r--r-- 2 boinc boinc    592399 Dec 16 17:21 input.tar.gz
[2025-12-16 20:16:30] -rw-r--r-- 2 boinc boinc     15847 Dec 16 17:21 start_atlas.sh
[2025-12-16 20:16:30] -rw-r--r-- 1 boinc boinc         0 Dec 16 17:21 boinc_lockfile
[2025-12-16 20:16:30] -rw-r--r-- 1 boinc boinc      2537 Dec 16 17:21 pandaJob.out
[2025-12-16 20:16:30] -rw------- 1 boinc boinc    987386 Dec 16 17:21 agis_schedconf.cvmfs.json
[2025-12-16 20:16:30] -rw------- 1 boinc boinc   1516240 Dec 16 17:21 agis_ddmendpoints.agis.ALL.json
[2025-12-16 20:16:30] drwx------ 5 boinc boinc      4096 Dec 16 17:21 pilot3
[2025-12-16 20:16:30] -rw------- 1 boinc boinc 150164844 Dec 16 20:13 HITS.47886831._007561.pool.root.1
[2025-12-16 20:16:30] -rw-r--r-- 1 boinc boinc       528 Dec 16 20:14 boinc_task_state.xml
[2025-12-16 20:16:30] -rw------- 1 boinc boinc      1030 Dec 16 20:14 memory_monitor_summary.json
[2025-12-16 20:16:30] -rw------- 1 boinc boinc    332874 Dec 16 20:14 log.47886831._007561.job.log.tgz.1
[2025-12-16 20:16:30] -rw------- 1 boinc boinc      7784 Dec 16 20:14 heartbeat.json
[2025-12-16 20:16:30] -rw------- 1 boinc boinc        95 Dec 16 20:15 pilot_heartbeat.json
[2025-12-16 20:16:30] -rw------- 1 boinc boinc      4835 Dec 16 20:15 pilotlog.txt
[2025-12-16 20:16:30] -rw------- 1 boinc boinc   1449031 Dec 16 20:15 log.47886831._007561.job.log.1
[2025-12-16 20:16:30] -rw------- 1 boinc boinc       357 Dec 16 20:15 output.list
[2025-12-16 20:16:30] -rw-r--r-- 1 boinc boinc       620 Dec 16 20:15 runtime_log
[2025-12-16 20:16:30] -rw------- 1 boinc boinc   1802240 Dec 16 20:15 result.tar.gz
[2025-12-16 20:16:30] -rw------- 1 boinc boinc       666 Dec 16 20:15 yODNDmEoIp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmPXKDmlaDFtn.diag
[2025-12-16 20:16:30] -rw-r--r-- 1 boinc boinc      9223 Dec 16 20:15 runtime_log.err
[2025-12-16 20:16:30] -rw-r--r-- 1 boinc boinc        26 Dec 16 20:16 wrapper_checkpoint.txt
[2025-12-16 20:16:30] -rw-r--r-- 1 boinc boinc      8192 Dec 16 20:16 boinc_mmap_file
[2025-12-16 20:16:30] -rw-r--r-- 1 boinc boinc     21144 Dec 16 20:16 stderr.txt
[2025-12-16 20:16:30] HITS file was successfully produced:
[2025-12-16 20:16:30] -rw------- 1 boinc boinc 150164844 Dec 16 20:13 shared/HITS.pool.root.1
[2025-12-16 20:16:30]  *** Contents of shared directory: ***
[2025-12-16 20:16:30] total 334896
[2025-12-16 20:16:30] -rw-r--r-- 2 boinc boinc 190343191 Dec 16 17:21 ATLAS.root_0
[2025-12-16 20:16:30] -rw-r--r-- 2 boinc boinc    592399 Dec 16 17:21 input.tar.gz
[2025-12-16 20:16:30] -rw-r--r-- 2 boinc boinc     15847 Dec 16 17:21 start_atlas.sh
[2025-12-16 20:16:30] -rw------- 1 boinc boinc 150164844 Dec 16 20:13 HITS.pool.root.1
[2025-12-16 20:16:30] -rw------- 1 boinc boinc   1802240 Dec 16 20:15 result.tar.gz
20:16:31 (1473057): run_atlas exited; CPU time 41092.268377
20:16:31 (1473057): called boinc_finish(0)

</stderr_txt>
]]>

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