Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:16:40 (1824153): wrapper (7.7.26015): starting
20:16:40 (1824153): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 20:16:40] Arguments: --nthreads 4
[2025-12-16 20:16:40] Threads: 4
[2025-12-16 20:16:40] Checking for CVMFS
[2025-12-16 20:16:40] No cvmfs_config command found, will try listing directly
[2025-12-16 20:16:40] CVMFS is ok
[2025-12-16 20:16:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 20:16:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 20:16:40] Further information can be found at the LHC@home message board.
[2025-12-16 20:16:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 20:16:40] Checking for apptainer binary...
[2025-12-16 20:16:40] which: no apptainer in ((null))
[2025-12-16 20:16:40] apptainer is not installed, using version from CVMFS
[2025-12-16 20:16:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 20:16:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-12-16 20:16:40] apptainer works
[2025-12-16 20:16:40] Set ATHENA_PROC_NUMBER=4
[2025-12-16 20:16:40] Set ATHENA_CORE_NUMBER=4
[2025-12-16 20:16:40] Starting ATLAS job with PandaID=6931295850
[2025-12-16 20:16:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 23:02:57]  *** The last 200 lines of the pilot log: ***
[2025-12-16 23:02:57] 2025-12-16 21:54:03,984 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 23:02:57] 2025-12-16 21:54:05,247 | INFO     | time since job start (9430s) is within the limit (174528.0s)
[2025-12-16 23:02:57] 2025-12-16 21:54:06,487 | INFO     | monitor loop #643: job 0:6931295850 is in state 'finished'
[2025-12-16 23:02:57] 2025-12-16 21:54:06,487 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 23:02:57] 2025-12-16 21:54:07,252 | INFO     | time since job start (9432s) is within the limit (174528.0s)
[2025-12-16 23:02:57] 2025-12-16 21:54:08,991 | INFO     | monitor loop #644: job 0:6931295850 is in state 'finished'
[2025-12-16 23:02:57] 2025-12-16 21:54:08,992 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 23:02:57] 2025-12-16 21:54:09,312 | INFO     | PID=1828140 has CPU usage=17.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-16 23:02:57] 2025-12-16 21:54:09,312 | INFO     | .. there are 10 such processes running
[2025-12-16 23:02:57] 2025-12-16 21:54:09,421 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 23:02:57] 2025-12-16 21:54:09,440 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2719.408578125
[2025-12-16 23:02:57] 2025-12-16 21:54:09,463 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6931295850/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 23:02:57] 2025-12-16 21:54:09,464 | INFO     | extracted standard info from prmon json
[2025-12-16 23:02:57] 2025-12-16 21:54:09,464 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 23:02:57] 2025-12-16 21:54:09,464 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 23:02:57] 2025-12-16 21:54:09,465 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 23:02:57] 2025-12-16 21:54:09,465 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 23:02:57] 2025-12-16 21:54:09,468 | INFO     | fitting pss+swap vs Time
[2025-12-16 23:02:57] 2025-12-16 21:54:09,468 | INFO     | sum of square deviations: 1132458442.5
[2025-12-16 23:02:57] 2025-12-16 21:54:09,469 | INFO     | sum of deviations: 7016791478.499998
[2025-12-16 23:02:57] 2025-12-16 21:54:09,469 | INFO     | mean x: 1765917317.5
[2025-12-16 23:02:57] 2025-12-16 21:54:09,469 | INFO     | mean y: 2325060.2922077924
[2025-12-16 23:02:57] 2025-12-16 21:54:09,469 | INFO     | intersect: -10939421780.161566
[2025-12-16 23:02:57] 2025-12-16 21:54:09,469 | INFO     | chi2: 1.3370953585904213
[2025-12-16 23:02:57] 2025-12-16 21:54:09,470 | INFO     | sum of square deviations: 1025693650.0
[2025-12-16 23:02:57] 2025-12-16 21:54:09,470 | INFO     | sum of deviations: 6847712319.000001
[2025-12-16 23:02:57] 2025-12-16 21:54:09,470 | INFO     | mean x: 1765917165.0
[2025-12-16 23:02:57] 2025-12-16 21:54:09,471 | INFO     | mean y: 2324818.7181208055
[2025-12-16 23:02:57] 2025-12-16 21:54:09,471 | INFO     | intersect: -11787250679.87647
[2025-12-16 23:02:57] 2025-12-16 21:54:09,471 | INFO     | chi2: 1.3382606925766434
[2025-12-16 23:02:57] 2025-12-16 21:54:09,471 | INFO     | current chi2=1.3382606925766434 (change=-0.08715414190432916 %)
[2025-12-16 23:02:57] 2025-12-16 21:54:09,471 | INFO     | right removable region: 148
[2025-12-16 23:02:57] 2025-12-16 21:54:09,471 | INFO     | sum of square deviations: 1025693650.0
[2025-12-16 23:02:57] 2025-12-16 21:54:09,472 | INFO     | sum of deviations: -10376616486.999998
[2025-12-16 23:02:57] 2025-12-16 21:54:09,472 | INFO     | mean x: 1765917470.0
[2025-12-16 23:02:57] 2025-12-16 21:54:09,472 | INFO     | mean y: 2349412.2953020134
[2025-12-16 23:02:57] 2025-12-16 21:54:09,472 | INFO     | intersect: 17867574895.443535
[2025-12-16 23:02:57] 2025-12-16 21:54:09,473 | INFO     | chi2: 0.055348309968958675
[2025-12-16 23:02:57] 2025-12-16 21:54:09,473 | INFO     | current chi2=0.055348309968958675 (change=95.86055627122157 %)
[2025-12-16 23:02:57] 2025-12-16 21:54:09,473 | INFO     | sum of square deviations: 925859220.0
[2025-12-16 23:02:57] 2025-12-16 21:54:09,474 | INFO     | sum of deviations: -8040710730.0
[2025-12-16 23:02:57] 2025-12-16 21:54:09,474 | INFO     | mean x: 1765917622.5
[2025-12-16 23:02:57] 2025-12-16 21:54:09,474 | INFO     | mean y: 2345813.138888889
[2025-12-16 23:02:57] 2025-12-16 21:54:09,474 | INFO     | intersect: 15338622072.86209
[2025-12-16 23:02:57] 2025-12-16 21:54:09,474 | INFO     | chi2: 0.049279436130811524
[2025-12-16 23:02:57] 2025-12-16 21:54:09,474 | INFO     | current chi2=0.049279436130811524 (change=10.9648765094197 %)
[2025-12-16 23:02:57] 2025-12-16 21:54:09,474 | INFO     | left removable region: 20
[2025-12-16 23:02:57] 2025-12-16 21:54:09,475 | INFO     | sum of square deviations: 650252192.0
[2025-12-16 23:02:57] 2025-12-16 21:54:09,475 | INFO     | sum of deviations: -924405102.0
[2025-12-16 23:02:57] 2025-12-16 21:54:09,475 | INFO     | mean x: 1765917744.5
[2025-12-16 23:02:57] 2025-12-16 21:54:09,475 | INFO     | mean y: 2333857.828125
[2025-12-16 23:02:57] 2025-12-16 21:54:09,476 | INFO     | intersect: 2512780408.892012
[2025-12-16 23:02:57] 2025-12-16 21:54:09,476 | INFO     | chi2: 0.011416166387026853
[2025-12-16 23:02:57] 2025-12-16 21:54:09,476 | INFO     | current memory leak: -1.42 B/s (using 128 data points, chi2=0.01)
[2025-12-16 23:02:57] 2025-12-16 21:54:09,476 | INFO     | could have reported an average CPU frequency of 2708 MHz (9 samples)
[2025-12-16 23:02:57] 2025-12-16 21:54:09,476 | INFO     | ..............................
[2025-12-16 23:02:57] 2025-12-16 21:54:09,476 | INFO     | . Timing measurements:
[2025-12-16 23:02:57] 2025-12-16 21:54:09,477 | INFO     | . get job = 0 s
[2025-12-16 23:02:57] 2025-12-16 21:54:09,477 | INFO     | . initial setup = 1 s
[2025-12-16 23:02:57] 2025-12-16 21:54:09,477 | INFO     | . payload setup = 9 s
[2025-12-16 23:02:57] 2025-12-16 21:54:09,477 | INFO     | . stage-in = 0 s
[2025-12-16 23:02:57] 2025-12-16 21:54:09,477 | INFO     | . payload execution = 9390 s
[2025-12-16 23:02:57] 2025-12-16 21:54:09,477 | INFO     | . stage-out = 0 s
[2025-12-16 23:02:57] 2025-12-16 21:54:09,477 | INFO     | . log creation = 0 s
[2025-12-16 23:02:57] 2025-12-16 21:54:09,477 | INFO     | ..............................
[2025-12-16 23:02:57] 2025-12-16 21:54:09,851 | INFO     | 
[2025-12-16 23:02:57] 2025-12-16 21:54:09,851 | INFO     | job summary report
[2025-12-16 23:02:57] 2025-12-16 21:54:09,851 | INFO     | --------------------------------------------------
[2025-12-16 23:02:57] 2025-12-16 21:54:09,851 | INFO     | PanDA job id: 6931295850
[2025-12-16 23:02:57] 2025-12-16 21:54:09,851 | INFO     | task id: 47898878
[2025-12-16 23:02:57] 2025-12-16 21:54:09,851 | INFO     | errors: (none)
[2025-12-16 23:02:57] 2025-12-16 21:54:09,852 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 23:02:57] 2025-12-16 21:54:09,852 | INFO     | pilot state: finished 
[2025-12-16 23:02:57] 2025-12-16 21:54:09,852 | INFO     | transexitcode: 0
[2025-12-16 23:02:57] 2025-12-16 21:54:09,852 | INFO     | exeerrorcode: 0
[2025-12-16 23:02:57] 2025-12-16 21:54:09,852 | INFO     | exeerrordiag: 
[2025-12-16 23:02:57] 2025-12-16 21:54:09,852 | INFO     | exitcode: 0
[2025-12-16 23:02:57] 2025-12-16 21:54:09,852 | INFO     | exitmsg: OK
[2025-12-16 23:02:57] 2025-12-16 21:54:09,852 | INFO     | cpuconsumptiontime: 36218 s
[2025-12-16 23:02:57] 2025-12-16 21:54:09,852 | INFO     | nevents: 400
[2025-12-16 23:02:57] 2025-12-16 21:54:09,852 | INFO     | neventsw: 0
[2025-12-16 23:02:57] 2025-12-16 21:54:09,853 | INFO     | pid: 1835497
[2025-12-16 23:02:57] 2025-12-16 21:54:09,853 | INFO     | pgrp: 1835497
[2025-12-16 23:02:57] 2025-12-16 21:54:09,853 | INFO     | corecount: 4
[2025-12-16 23:02:57] 2025-12-16 21:54:09,853 | INFO     | event service: False
[2025-12-16 23:02:57] 2025-12-16 21:54:09,853 | INFO     | sizes: {0: 2283906, 1: 2283906, 7: 2284196, 11: 2284224, 9404: 2312906, 9406: 2321928, 9409: 2322112, 9416: 2322370}
[2025-12-16 23:02:57] 2025-12-16 21:54:09,853 | INFO     | --------------------------------------------------
[2025-12-16 23:02:57] 2025-12-16 21:54:09,853 | INFO     | 
[2025-12-16 23:02:57] 2025-12-16 21:54:09,853 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-12-16 23:02:57] 2025-12-16 21:54:09,886 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 23:02:57] 2025-12-16 21:54:09,887 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 23:02:57] 2025-12-16 21:54:09,887 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 23:02:57] 2025-12-16 21:54:09,887 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 23:02:57] 2025-12-16 21:54:09,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 23:02:57] 2025-12-16 21:54:09,887 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 23:02:57] 2025-12-16 21:54:09,887 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 23:02:57] 2025-12-16 21:54:09,887 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 23:02:57] 2025-12-16 21:54:09,888 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 23:02:57] 2025-12-16 21:54:09,888 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 23:02:57] 2025-12-16 21:54:09,888 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 23:02:57] 2025-12-16 21:54:09,888 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 23:02:57] 2025-12-16 21:54:09,888 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 23:02:57] 2025-12-16 21:54:09,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 23:02:57] 2025-12-16 21:54:09,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 23:02:57] 2025-12-16 21:54:09,888 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 23:02:57] 2025-12-16 21:54:09,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 23:02:57] 2025-12-16 21:54:09,888 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 23:02:57] 2025-12-16 21:54:09,889 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 23:02:57] 2025-12-16 21:54:09,889 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 23:02:57] 2025-12-16 21:54:09,889 | INFO     | job 6931295850 has completed (purged errors)
[2025-12-16 23:02:57] 2025-12-16 21:54:09,889 | INFO     | overall cleanup function is called
[2025-12-16 23:02:57] 2025-12-16 21:54:10,898 | INFO     | --- collectZombieJob: --- 10, [1835497]
[2025-12-16 23:02:57] 2025-12-16 21:54:10,899 | INFO     | zombie collector waiting for pid 1835497
[2025-12-16 23:02:57] 2025-12-16 21:54:10,899 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 23:02:57] 2025-12-16 21:54:10,899 | INFO     | collected zombie processes
[2025-12-16 23:02:57] 2025-12-16 21:54:10,899 | INFO     | will attempt to kill all subprocesses of pid=1835497
[2025-12-16 23:02:57] 2025-12-16 21:54:11,742 | INFO     | process IDs to be killed: [1835497] (in reverse order)
[2025-12-16 23:02:57] 2025-12-16 21:54:12,019 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 23:02:57] 2025-12-16 21:54:12,020 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 23:02:57] 2025-12-16 21:54:12,056 | INFO     | did not find any defunct processes belonging to 1835497
[2025-12-16 23:02:57] 2025-12-16 21:54:12,093 | INFO     | did not find any defunct processes belonging to 1835497
[2025-12-16 23:02:57] 2025-12-16 21:54:12,094 | INFO     | ready for new job
[2025-12-16 23:02:57] 2025-12-16 21:54:12,094 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 23:02:57] 2025-12-16 21:54:12,097 | INFO     | ***************************************
[2025-12-16 23:02:57] 2025-12-16 21:54:12,097 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 23:02:57] 2025-12-16 21:54:12,098 | INFO     | ***************************************
[2025-12-16 23:02:57] 2025-12-16 21:54:12,098 | INFO     | 
[2025-12-16 23:02:57] 2025-12-16 21:54:12,107 | INFO     | architecture information:
[2025-12-16 23:02:57] 2025-12-16 21:54:12,107 | INFO     | executing command: cat /etc/os-release
[2025-12-16 23:02:57] 2025-12-16 21:54:12,135 | INFO     | cat /etc/os-release:
[2025-12-16 23:02:57] NAME="CentOS Linux"
[2025-12-16 23:02:57] VERSION="7 (Core)"
[2025-12-16 23:02:57] ID="centos"
[2025-12-16 23:02:57] ID_LIKE="rhel fedora"
[2025-12-16 23:02:57] VERSION_ID="7"
[2025-12-16 23:02:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 23:02:57] ANSI_COLOR="0;31"
[2025-12-16 23:02:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 23:02:57] HOME_URL="https://www.centos.org/"
[2025-12-16 23:02:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 23:02:57] 
[2025-12-16 23:02:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 23:02:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 23:02:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 23:02:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 23:02:57] 
[2025-12-16 23:02:57] 2025-12-16 21:54:12,135 | INFO     | ***************************************
[2025-12-16 23:02:57] 2025-12-16 21:54:12,639 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-12-16 23:02:57] 2025-12-16 21:54:12,670 | INFO     | sufficient remaining disk space (3343070003200 B)
[2025-12-16 23:02:57] 2025-12-16 21:54:12,671 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 23:02:57] 2025-12-16 21:54:12,671 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 23:02:57] 2025-12-16 21:54:12,671 | INFO     | update_server=False
[2025-12-16 23:02:57] 2025-12-16 21:54:12,671 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 23:02:57] 2025-12-16 21:54:12,672 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 23:02:57] 2025-12-16 21:54:12,672 | INFO     | aborting loop
[2025-12-16 23:02:57] 2025-12-16 21:54:12,710 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 23:02:57] 2025-12-16 21:54:13,032 | INFO     | all data control threads have been joined
[2025-12-16 23:02:57] 2025-12-16 21:54:13,073 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 23:02:57] 2025-12-16 21:54:13,636 | INFO     | all payload control threads have been joined
[2025-12-16 23:02:57] 2025-12-16 21:54:13,676 | INFO     | [job] job monitor thread has finished
[2025-12-16 23:02:57] 2025-12-16 21:54:13,677 | INFO     | [job] retrieve thread has finished
[2025-12-16 23:02:57] 2025-12-16 21:54:13,748 | INFO     | all job control threads have been joined
[2025-12-16 23:02:57] 2025-12-16 21:54:13,942 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 23:02:57] 2025-12-16 21:54:14,038 | INFO     | [data] control thread has finished
[2025-12-16 23:02:57] 2025-12-16 21:54:14,076 | INFO     | [job] validate thread has finished
[2025-12-16 23:02:57] 2025-12-16 21:54:14,259 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 23:02:57] 2025-12-16 21:54:14,402 | INFO     | [payload] failed_post thread has finished
[2025-12-16 23:02:57] 2025-12-16 21:54:14,585 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 23:02:57] 2025-12-16 21:54:14,597 | INFO     | [payload] validate_post thread has finished
[2025-12-16 23:02:57] 2025-12-16 21:54:14,634 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 23:02:57] 2025-12-16 21:54:14,641 | INFO     | [payload] control thread has finished
[2025-12-16 23:02:57] 2025-12-16 21:54:14,719 | INFO     | [data] copytool_out thread has finished
[2025-12-16 23:02:57] 2025-12-16 21:54:14,753 | INFO     | [job] control thread has finished
[2025-12-16 23:02:57] 2025-12-16 21:54:14,882 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 23:02:57] 2025-12-16 21:54:15,097 | INFO     | [data] copytool_in thread has finished
[2025-12-16 23:02:57] 2025-12-16 21:54:15,590 | INFO     | [job] queue monitor thread has finished
[2025-12-16 23:02:57] 2025-12-16 21:54:17,079 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 23:02:57] 2025-12-16 21:54:42,412 | INFO     | PID=1828140 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 23:02:57] 2025-12-16 21:54:42,412 | INFO     | .. there are 10 such processes running
[2025-12-16 23:02:57] 2025-12-16 21:54:42,413 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 23:02:57] 2025-12-16 21:54:42,413 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 23:02:57] 2025-12-16 21:54:42,413 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 23:02:57] 2025-12-16 21:55:10,404 | INFO     | [monitor] cgroup control has ended
[2025-12-16 23:02:57] 2025-12-16 21:55:11,205 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23185991554880)>', '<ExcThread(monitor, started 23185749665536)>']
[2025-12-16 23:02:57] 2025-12-16 21:55:11,557 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 23:02:57] 2025-12-16 21:55:11,558 | INFO     | [monitor] control thread has ended
[2025-12-16 23:02:57] 2025-12-16 21:55:16,230 | INFO     | all workflow threads have been joined
[2025-12-16 23:02:57] 2025-12-16 21:55:16,230 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 23:02:57] 2025-12-16 21:55:16,230 | INFO     | traces error code: 0
[2025-12-16 23:02:57] 2025-12-16 21:55:16,230 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 23:02:57] 2025-12-16 21:55:16,380 [wrapper] ==== pilot stdout END ====
[2025-12-16 23:02:57] 2025-12-16 21:55:16,384 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 23:02:57] 2025-12-16 21:55:16,389 [wrapper] pilotpid: 1828140
[2025-12-16 23:02:57] 2025-12-16 21:55:16,392 [wrapper] Pilot exit status: 0
[2025-12-16 23:02:57] 2025-12-16 21:55:16,407 [wrapper] pandaids: 6931295850
[2025-12-16 23:02:57] 2025-12-16 21:55:16,600 [wrapper] cleanup supervisor_pilot 2209867 1828141
[2025-12-16 23:02:57] 2025-12-16 21:55:16,604 [wrapper] Test setup, not cleaning
[2025-12-16 23:02:57] 2025-12-16 21:55:16,608 [wrapper] apfmon messages muted
[2025-12-16 23:02:57] 2025-12-16 21:55:16,612 [wrapper] ==== wrapper stdout END ====
[2025-12-16 23:02:57] 2025-12-16 21:55:16,616 [wrapper] ==== wrapper stderr END ====
[2025-12-16 23:02:57]  *** Error codes and diagnostics ***
[2025-12-16 23:02:57]     "exeErrorCode": 0,
[2025-12-16 23:02:57]     "exeErrorDiag": "",
[2025-12-16 23:02:57]     "pilotErrorCode": 0,
[2025-12-16 23:02:57]     "pilotErrorDiag": "",
[2025-12-16 23:02:57]  *** Listing of results directory ***
[2025-12-16 23:02:57] total 381380
[2025-12-16 23:02:57] -rw-r--r-- 1 boinc boinc    579449 Dec 15 04:37 pilot3.tar.gz
[2025-12-16 23:02:57] -rwx------ 1 boinc boinc     36322 Dec 15 04:37 runpilot2-wrapper.sh
[2025-12-16 23:02:57] -rw-r--r-- 1 boinc boinc      5112 Dec 15 04:37 queuedata.json
[2025-12-16 23:02:57] -rw-r--r-- 1 boinc boinc       100 Dec 16 20:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 23:02:57] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 20:16 run_atlas
[2025-12-16 23:02:57] -rw-r--r-- 1 boinc boinc       105 Dec 16 20:16 job.xml
[2025-12-16 23:02:57] -rw-r--r-- 2 boinc boinc 200888285 Dec 16 20:16 EVNT.47898875._000119.pool.root.1
[2025-12-16 23:02:57] -rw-r--r-- 1 boinc boinc      6692 Dec 16 20:16 init_data.xml
[2025-12-16 23:02:57] -rw-r--r-- 2 boinc boinc     15847 Dec 16 20:16 start_atlas.sh
[2025-12-16 23:02:57] drwxrwx--x 2 boinc boinc      4096 Dec 16 20:16 shared
[2025-12-16 23:02:57] -rw-r--r-- 2 boinc boinc    592386 Dec 16 20:16 input.tar.gz
[2025-12-16 23:02:57] -rw-r--r-- 1 boinc boinc         0 Dec 16 20:16 boinc_lockfile
[2025-12-16 23:02:57] -rw-r--r-- 1 boinc boinc      2500 Dec 16 20:16 pandaJob.out
[2025-12-16 23:02:57] -rw------- 1 boinc boinc    987409 Dec 16 20:16 agis_schedconf.cvmfs.json
[2025-12-16 23:02:57] -rw------- 1 boinc boinc   1516240 Dec 16 20:16 agis_ddmendpoints.agis.ALL.json
[2025-12-16 23:02:57] drwx------ 5 boinc boinc      4096 Dec 16 20:16 pilot3
[2025-12-16 23:02:57] -rw------- 1 boinc boinc 182448615 Dec 16 22:53 HITS.47898878._002986.pool.root.1
[2025-12-16 23:02:57] -rw-r--r-- 1 boinc boinc       529 Dec 16 22:53 boinc_task_state.xml
[2025-12-16 23:02:57] -rw------- 1 boinc boinc      1028 Dec 16 22:53 memory_monitor_summary.json
[2025-12-16 23:02:57] -rw------- 1 boinc boinc    322251 Dec 16 22:53 log.47898878._002986.job.log.tgz.1
[2025-12-16 23:02:57] -rw------- 1 boinc boinc      7790 Dec 16 22:54 heartbeat.json
[2025-12-16 23:02:57] -rw------- 1 boinc boinc        95 Dec 16 22:54 pilot_heartbeat.json
[2025-12-16 23:02:57] -rw------- 1 boinc boinc      4836 Dec 16 22:55 pilotlog.txt
[2025-12-16 23:02:57] -rw------- 1 boinc boinc   1319716 Dec 16 22:55 log.47898878._002986.job.log.1
[2025-12-16 23:02:57] -rw------- 1 boinc boinc       357 Dec 16 22:55 output.list
[2025-12-16 23:02:57] -rw-r--r-- 1 boinc boinc       620 Dec 16 22:55 runtime_log
[2025-12-16 23:02:57] -rw------- 1 boinc boinc   1658880 Dec 16 22:55 result.tar.gz
[2025-12-16 23:02:57] -rw-r--r-- 1 boinc boinc      9222 Dec 16 22:55 runtime_log.err
[2025-12-16 23:02:57] -rw------- 1 boinc boinc       663 Dec 16 22:55 DwdKDm3ZEp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUdSKDmiCkIFm.diag
[2025-12-16 23:02:57] -rw-r--r-- 1 boinc boinc        26 Dec 16 23:02 wrapper_checkpoint.txt
[2025-12-16 23:02:57] -rw-r--r-- 1 boinc boinc      8192 Dec 16 23:02 boinc_mmap_file
[2025-12-16 23:02:57] -rw-r--r-- 1 boinc boinc     21211 Dec 16 23:02 stderr.txt
[2025-12-16 23:02:57] HITS file was successfully produced:
[2025-12-16 23:02:57] -rw------- 1 boinc boinc 182448615 Dec 16 22:53 shared/HITS.pool.root.1
[2025-12-16 23:02:57]  *** Contents of shared directory: ***
[2025-12-16 23:02:57] total 376580
[2025-12-16 23:02:57] -rw-r--r-- 2 boinc boinc 200888285 Dec 16 20:16 ATLAS.root_0
[2025-12-16 23:02:57] -rw-r--r-- 2 boinc boinc     15847 Dec 16 20:16 start_atlas.sh
[2025-12-16 23:02:57] -rw-r--r-- 2 boinc boinc    592386 Dec 16 20:16 input.tar.gz
[2025-12-16 23:02:57] -rw------- 1 boinc boinc 182448615 Dec 16 22:53 HITS.pool.root.1
[2025-12-16 23:02:57] -rw------- 1 boinc boinc   1658880 Dec 16 22:55 result.tar.gz
23:02:58 (1824153): run_atlas exited; CPU time 36880.444165
23:02:58 (1824153): called boinc_finish(0)

</stderr_txt>
]]>

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