Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:32:16 (1099953): wrapper (7.7.26015): starting
14:32:16 (1099953): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 14:32:16] Arguments: --nthreads 4
[2025-12-16 14:32:16] Threads: 4
[2025-12-16 14:32:16] Checking for CVMFS
[2025-12-16 14:32:16] No cvmfs_config command found, will try listing directly
[2025-12-16 14:32:16] CVMFS is ok
[2025-12-16 14:32:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 14:32:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 14:32:16] Further information can be found at the LHC@home message board.
[2025-12-16 14:32:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 14:32:16] Checking for apptainer binary...
[2025-12-16 14:32:16] which: no apptainer in ((null))
[2025-12-16 14:32:16] apptainer is not installed, using version from CVMFS
[2025-12-16 14:32:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 14:32:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-12-16 14:32:16] apptainer works
[2025-12-16 14:32:16] Set ATHENA_PROC_NUMBER=4
[2025-12-16 14:32:16] Set ATHENA_CORE_NUMBER=4
[2025-12-16 14:32:16] Starting ATLAS job with PandaID=6931295305
[2025-12-16 14:32:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 17:20:51]  *** The last 200 lines of the pilot log: ***
[2025-12-16 17:20:51] 2025-12-16 16:11:14,832 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2689.86221875
[2025-12-16 17:20:51] 2025-12-16 16:11:14,857 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6931295305/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 17:20:51] 2025-12-16 16:11:14,858 | INFO     | extracted standard info from prmon json
[2025-12-16 17:20:51] 2025-12-16 16:11:14,859 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 17:20:51] 2025-12-16 16:11:14,859 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 17:20:51] 2025-12-16 16:11:14,859 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 17:20:51] 2025-12-16 16:11:14,859 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 17:20:51] 2025-12-16 16:11:14,862 | INFO     | fitting pss+swap vs Time
[2025-12-16 17:20:51] 2025-12-16 16:11:14,863 | INFO     | sum of square deviations: 1177156955.0
[2025-12-16 17:20:51] 2025-12-16 16:11:14,864 | INFO     | sum of deviations: -663331018.9999981
[2025-12-16 17:20:51] 2025-12-16 16:11:14,864 | INFO     | mean x: 1765896716.5
[2025-12-16 17:20:51] 2025-12-16 16:11:14,864 | INFO     | mean y: 2320619.423076923
[2025-12-16 17:20:51] 2025-12-16 16:11:14,864 | INFO     | intersect: 997408031.8783648
[2025-12-16 17:20:51] 2025-12-16 16:11:14,864 | INFO     | chi2: 2.039021549704867
[2025-12-16 17:20:51] 2025-12-16 16:11:14,865 | INFO     | sum of square deviations: 1067554900.0
[2025-12-16 17:20:51] 2025-12-16 16:11:14,866 | INFO     | sum of deviations: 8228503927.000001
[2025-12-16 17:20:51] 2025-12-16 16:11:14,866 | INFO     | mean x: 1765896564.0
[2025-12-16 17:20:51] 2025-12-16 16:11:14,866 | INFO     | mean y: 2332669.3973509935
[2025-12-16 17:20:51] 2025-12-16 16:11:14,866 | INFO     | intersect: -13608851927.806791
[2025-12-16 17:20:51] 2025-12-16 16:11:14,866 | INFO     | chi2: 1.3793982312097575
[2025-12-16 17:20:51] 2025-12-16 16:11:14,867 | INFO     | current chi2=1.3793982312097575 (change=32.349992504521836 %)
[2025-12-16 17:20:51] 2025-12-16 16:11:14,867 | INFO     | sum of square deviations: 964976232.5
[2025-12-16 17:20:51] 2025-12-16 16:11:14,868 | INFO     | sum of deviations: 8035309149.500003
[2025-12-16 17:20:51] 2025-12-16 16:11:14,868 | INFO     | mean x: 1765896411.5
[2025-12-16 17:20:51] 2025-12-16 16:11:14,868 | INFO     | mean y: 2332382.0890410957
[2025-12-16 17:20:51] 2025-12-16 16:11:14,868 | INFO     | intersect: -14702199309.467594
[2025-12-16 17:20:51] 2025-12-16 16:11:14,868 | INFO     | chi2: 1.3807610248025048
[2025-12-16 17:20:51] 2025-12-16 16:11:14,868 | INFO     | current chi2=1.3807610248025048 (change=-0.09879624041218213 %)
[2025-12-16 17:20:51] 2025-12-16 16:11:14,869 | INFO     | right removable region: 145
[2025-12-16 17:20:51] 2025-12-16 16:11:14,869 | INFO     | sum of square deviations: 1067554900.0
[2025-12-16 17:20:51] 2025-12-16 16:11:14,870 | INFO     | sum of deviations: -19620039756.0
[2025-12-16 17:20:51] 2025-12-16 16:11:14,870 | INFO     | mean x: 1765896869.0
[2025-12-16 17:20:51] 2025-12-16 16:11:14,870 | INFO     | mean y: 2346527.4834437086
[2025-12-16 17:20:51] 2025-12-16 16:11:14,870 | INFO     | intersect: 32456852403.27112
[2025-12-16 17:20:51] 2025-12-16 16:11:14,870 | INFO     | chi2: 0.7220528827796113
[2025-12-16 17:20:51] 2025-12-16 16:11:14,870 | INFO     | current chi2=0.7220528827796113 (change=64.58826622582174 %)
[2025-12-16 17:20:51] 2025-12-16 16:11:14,871 | INFO     | sum of square deviations: 964976232.5
[2025-12-16 17:20:51] 2025-12-16 16:11:14,872 | INFO     | sum of deviations: -18748858923.0
[2025-12-16 17:20:51] 2025-12-16 16:11:14,872 | INFO     | mean x: 1765897021.5
[2025-12-16 17:20:51] 2025-12-16 16:11:14,872 | INFO     | mean y: 2345201.684931507
[2025-12-16 17:20:51] 2025-12-16 16:11:14,872 | INFO     | intersect: 34312572763.325314
[2025-12-16 17:20:51] 2025-12-16 16:11:14,872 | INFO     | chi2: 0.7191855144692819
[2025-12-16 17:20:51] 2025-12-16 16:11:14,872 | INFO     | current chi2=0.7191855144692819 (change=0.3971133387476002 %)
[2025-12-16 17:20:51] 2025-12-16 16:11:14,872 | INFO     | left removable region: 20
[2025-12-16 17:20:51] 2025-12-16 16:11:14,873 | INFO     | sum of square deviations: 605592750.0
[2025-12-16 17:20:51] 2025-12-16 16:11:14,873 | INFO     | sum of deviations: -6050793923.0
[2025-12-16 17:20:51] 2025-12-16 16:11:14,874 | INFO     | mean x: 1765896991.0
[2025-12-16 17:20:51] 2025-12-16 16:11:14,874 | INFO     | mean y: 2353247.992
[2025-12-16 17:20:51] 2025-12-16 16:11:14,874 | INFO     | intersect: 17646353744.673615
[2025-12-16 17:20:51] 2025-12-16 16:11:14,874 | INFO     | chi2: 0.0326338690142722
[2025-12-16 17:20:51] 2025-12-16 16:11:14,874 | INFO     | current memory leak: -9.99 B/s (using 125 data points, chi2=0.03)
[2025-12-16 17:20:51] 2025-12-16 16:11:14,874 | INFO     | could have reported an average CPU frequency of 2701 MHz (9 samples)
[2025-12-16 17:20:51] 2025-12-16 16:11:14,875 | INFO     | ..............................
[2025-12-16 17:20:51] 2025-12-16 16:11:14,875 | INFO     | . Timing measurements:
[2025-12-16 17:20:51] 2025-12-16 16:11:14,875 | INFO     | . get job = 0 s
[2025-12-16 17:20:51] 2025-12-16 16:11:14,875 | INFO     | . initial setup = 1 s
[2025-12-16 17:20:51] 2025-12-16 16:11:14,875 | INFO     | . payload setup = 9 s
[2025-12-16 17:20:51] 2025-12-16 16:11:14,875 | INFO     | . stage-in = 0 s
[2025-12-16 17:20:51] 2025-12-16 16:11:14,875 | INFO     | . payload execution = 9476 s
[2025-12-16 17:20:51] 2025-12-16 16:11:14,875 | INFO     | . stage-out = 0 s
[2025-12-16 17:20:51] 2025-12-16 16:11:14,875 | INFO     | . log creation = 0 s
[2025-12-16 17:20:51] 2025-12-16 16:11:14,875 | INFO     | ..............................
[2025-12-16 17:20:51] 2025-12-16 16:11:14,976 | INFO     | 
[2025-12-16 17:20:51] 2025-12-16 16:11:14,977 | INFO     | job summary report
[2025-12-16 17:20:51] 2025-12-16 16:11:14,977 | INFO     | --------------------------------------------------
[2025-12-16 17:20:51] 2025-12-16 16:11:14,977 | INFO     | PanDA job id: 6931295305
[2025-12-16 17:20:51] 2025-12-16 16:11:14,977 | INFO     | task id: 47898878
[2025-12-16 17:20:51] 2025-12-16 16:11:14,977 | INFO     | errors: (none)
[2025-12-16 17:20:51] 2025-12-16 16:11:14,977 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 17:20:51] 2025-12-16 16:11:14,977 | INFO     | pilot state: finished 
[2025-12-16 17:20:51] 2025-12-16 16:11:14,978 | INFO     | transexitcode: 0
[2025-12-16 17:20:51] 2025-12-16 16:11:14,978 | INFO     | exeerrorcode: 0
[2025-12-16 17:20:51] 2025-12-16 16:11:14,978 | INFO     | exeerrordiag: 
[2025-12-16 17:20:51] 2025-12-16 16:11:14,978 | INFO     | exitcode: 0
[2025-12-16 17:20:51] 2025-12-16 16:11:14,978 | INFO     | exitmsg: OK
[2025-12-16 17:20:51] 2025-12-16 16:11:14,978 | INFO     | cpuconsumptiontime: 36659 s
[2025-12-16 17:20:51] 2025-12-16 16:11:14,978 | INFO     | nevents: 400
[2025-12-16 17:20:51] 2025-12-16 16:11:14,978 | INFO     | neventsw: 0
[2025-12-16 17:20:51] 2025-12-16 16:11:14,978 | INFO     | pid: 1133223
[2025-12-16 17:20:51] 2025-12-16 16:11:14,978 | INFO     | pgrp: 1133223
[2025-12-16 17:20:51] 2025-12-16 16:11:14,978 | INFO     | corecount: 4
[2025-12-16 17:20:51] 2025-12-16 16:11:14,979 | INFO     | event service: False
[2025-12-16 17:20:51] 2025-12-16 16:11:14,979 | INFO     | sizes: {0: 2283906, 7: 2284168, 11: 2284196, 9490: 2312906, 9491: 2321928, 9495: 2321984, 9504: 2322370}
[2025-12-16 17:20:51] 2025-12-16 16:11:14,979 | INFO     | --------------------------------------------------
[2025-12-16 17:20:51] 2025-12-16 16:11:14,979 | INFO     | 
[2025-12-16 17:20:51] 2025-12-16 16:11:14,979 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-12-16 17:20:51] 2025-12-16 16:11:15,021 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 17:20:51] 2025-12-16 16:11:15,022 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 17:20:51] 2025-12-16 16:11:15,022 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 17:20:51] 2025-12-16 16:11:15,022 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 17:20:51] 2025-12-16 16:11:15,022 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 17:20:51] 2025-12-16 16:11:15,022 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 17:20:51] 2025-12-16 16:11:15,022 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 17:20:51] 2025-12-16 16:11:15,022 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 17:20:51] 2025-12-16 16:11:15,022 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 17:20:51] 2025-12-16 16:11:15,022 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 17:20:51] 2025-12-16 16:11:15,023 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 17:20:51] 2025-12-16 16:11:15,023 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 17:20:51] 2025-12-16 16:11:15,023 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 17:20:51] 2025-12-16 16:11:15,023 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 17:20:51] 2025-12-16 16:11:15,023 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 17:20:51] 2025-12-16 16:11:15,023 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 17:20:51] 2025-12-16 16:11:15,023 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 17:20:51] 2025-12-16 16:11:15,023 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 17:20:51] 2025-12-16 16:11:15,023 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 17:20:51] 2025-12-16 16:11:15,023 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 17:20:51] 2025-12-16 16:11:15,024 | INFO     | job 6931295305 has completed (purged errors)
[2025-12-16 17:20:51] 2025-12-16 16:11:15,024 | INFO     | overall cleanup function is called
[2025-12-16 17:20:51] 2025-12-16 16:11:16,033 | INFO     | --- collectZombieJob: --- 10, [1133223]
[2025-12-16 17:20:51] 2025-12-16 16:11:16,033 | INFO     | zombie collector waiting for pid 1133223
[2025-12-16 17:20:51] 2025-12-16 16:11:16,033 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 17:20:51] 2025-12-16 16:11:16,033 | INFO     | collected zombie processes
[2025-12-16 17:20:51] 2025-12-16 16:11:16,033 | INFO     | will attempt to kill all subprocesses of pid=1133223
[2025-12-16 17:20:51] 2025-12-16 16:11:16,846 | INFO     | process IDs to be killed: [1133223] (in reverse order)
[2025-12-16 17:20:51] 2025-12-16 16:11:17,121 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 17:20:51] 2025-12-16 16:11:17,121 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 17:20:51] 2025-12-16 16:11:17,154 | INFO     | did not find any defunct processes belonging to 1133223
[2025-12-16 17:20:51] 2025-12-16 16:11:17,189 | INFO     | did not find any defunct processes belonging to 1133223
[2025-12-16 17:20:51] 2025-12-16 16:11:17,189 | INFO     | ready for new job
[2025-12-16 17:20:51] 2025-12-16 16:11:17,189 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 17:20:51] 2025-12-16 16:11:17,192 | INFO     | ***************************************
[2025-12-16 17:20:51] 2025-12-16 16:11:17,192 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 17:20:51] 2025-12-16 16:11:17,192 | INFO     | ***************************************
[2025-12-16 17:20:51] 2025-12-16 16:11:17,193 | INFO     | 
[2025-12-16 17:20:51] 2025-12-16 16:11:17,201 | INFO     | architecture information:
[2025-12-16 17:20:51] 2025-12-16 16:11:17,201 | INFO     | executing command: cat /etc/os-release
[2025-12-16 17:20:51] 2025-12-16 16:11:17,227 | INFO     | cat /etc/os-release:
[2025-12-16 17:20:51] NAME="CentOS Linux"
[2025-12-16 17:20:51] VERSION="7 (Core)"
[2025-12-16 17:20:51] ID="centos"
[2025-12-16 17:20:51] ID_LIKE="rhel fedora"
[2025-12-16 17:20:51] VERSION_ID="7"
[2025-12-16 17:20:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 17:20:51] ANSI_COLOR="0;31"
[2025-12-16 17:20:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 17:20:51] HOME_URL="https://www.centos.org/"
[2025-12-16 17:20:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 17:20:51] 
[2025-12-16 17:20:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 17:20:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 17:20:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 17:20:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 17:20:51] 
[2025-12-16 17:20:51] 2025-12-16 16:11:17,228 | INFO     | ***************************************
[2025-12-16 17:20:51] 2025-12-16 16:11:17,731 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-12-16 17:20:51] 2025-12-16 16:11:17,761 | INFO     | sufficient remaining disk space (3341879869440 B)
[2025-12-16 17:20:51] 2025-12-16 16:11:17,762 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 17:20:51] 2025-12-16 16:11:17,762 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 17:20:51] 2025-12-16 16:11:17,762 | INFO     | update_server=False
[2025-12-16 17:20:51] 2025-12-16 16:11:17,762 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 17:20:51] 2025-12-16 16:11:17,763 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 17:20:51] 2025-12-16 16:11:17,925 | INFO     | all payload control threads have been joined
[2025-12-16 17:20:51] 2025-12-16 16:11:17,984 | INFO     | all data control threads have been joined
[2025-12-16 17:20:51] 2025-12-16 16:11:18,183 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-16 17:20:51] 2025-12-16 16:11:18,183 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-16 17:20:51] 2025-12-16 16:11:18,183 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 17:20:51] 2025-12-16 16:11:18,183 | INFO     | will abort loop
[2025-12-16 17:20:51] 2025-12-16 16:11:18,587 | INFO     | all job control threads have been joined
[2025-12-16 17:20:51] 2025-12-16 16:11:18,768 | INFO     | [job] retrieve thread has finished
[2025-12-16 17:20:51] 2025-12-16 16:11:18,930 | INFO     | [payload] control thread has finished
[2025-12-16 17:20:51] 2025-12-16 16:11:18,968 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 17:20:51] 2025-12-16 16:11:18,990 | INFO     | [data] control thread has finished
[2025-12-16 17:20:51] 2025-12-16 16:11:19,189 | INFO     | [job] job monitor thread has finished
[2025-12-16 17:20:51] 2025-12-16 16:11:19,216 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 17:20:51] 2025-12-16 16:11:19,282 | INFO     | [payload] validate_post thread has finished
[2025-12-16 17:20:51] 2025-12-16 16:11:19,587 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 17:20:51] 2025-12-16 16:11:19,593 | INFO     | [job] control thread has finished
[2025-12-16 17:20:51] 2025-12-16 16:11:19,767 | INFO     | [data] copytool_out thread has finished
[2025-12-16 17:20:51] 2025-12-16 16:11:19,805 | INFO     | [job] validate thread has finished
[2025-12-16 17:20:51] 2025-12-16 16:11:19,987 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 17:20:51] 2025-12-16 16:11:20,161 | INFO     | [payload] failed_post thread has finished
[2025-12-16 17:20:51] 2025-12-16 16:11:20,181 | INFO     | [data] copytool_in thread has finished
[2025-12-16 17:20:51] 2025-12-16 16:11:20,472 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 17:20:51] 2025-12-16 16:11:20,992 | INFO     | [job] queue monitor thread has finished
[2025-12-16 17:20:51] 2025-12-16 16:11:24,478 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 17:20:51] 2025-12-16 16:11:28,353 | INFO     | job.realtimelogging is not enabled
[2025-12-16 17:20:51] 2025-12-16 16:11:29,358 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 17:20:51] 2025-12-16 16:11:47,167 | INFO     | [monitor] cgroup control has ended
[2025-12-16 17:20:51] 2025-12-16 16:11:47,614 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22940501362496)>', '<ExcThread(monitor, started 22940261250816)>']
[2025-12-16 17:20:51] 2025-12-16 16:11:48,456 | INFO     | PID=1111093 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 17:20:51] 2025-12-16 16:11:48,457 | INFO     | .. there are 9 such processes running
[2025-12-16 17:20:51] 2025-12-16 16:11:48,457 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 17:20:51] 2025-12-16 16:11:48,457 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 17:20:51] 2025-12-16 16:11:48,457 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 17:20:51] 2025-12-16 16:11:48,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 17:20:51] 2025-12-16 16:11:48,457 | INFO     | [monitor] control thread has ended
[2025-12-16 17:20:51] 2025-12-16 16:11:52,639 | INFO     | all workflow threads have been joined
[2025-12-16 17:20:51] 2025-12-16 16:11:52,639 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 17:20:51] 2025-12-16 16:11:52,639 | INFO     | traces error code: 0
[2025-12-16 17:20:51] 2025-12-16 16:11:52,640 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 17:20:51] 2025-12-16 16:11:52,877 [wrapper] ==== pilot stdout END ====
[2025-12-16 17:20:51] 2025-12-16 16:11:52,881 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 17:20:51] 2025-12-16 16:11:52,885 [wrapper] pilotpid: 1111093
[2025-12-16 17:20:51] 2025-12-16 16:11:52,889 [wrapper] Pilot exit status: 0
[2025-12-16 17:20:51] 2025-12-16 16:11:52,904 [wrapper] pandaids: 6931295305
[2025-12-16 17:20:51] 2025-12-16 16:11:53,082 [wrapper] cleanup supervisor_pilot 1445897 1111094
[2025-12-16 17:20:51] 2025-12-16 16:11:53,086 [wrapper] Test setup, not cleaning
[2025-12-16 17:20:51] 2025-12-16 16:11:53,090 [wrapper] apfmon messages muted
[2025-12-16 17:20:51] 2025-12-16 16:11:53,094 [wrapper] ==== wrapper stdout END ====
[2025-12-16 17:20:51] 2025-12-16 16:11:53,098 [wrapper] ==== wrapper stderr END ====
[2025-12-16 17:20:51]  *** Error codes and diagnostics ***
[2025-12-16 17:20:51]     "exeErrorCode": 0,
[2025-12-16 17:20:51]     "exeErrorDiag": "",
[2025-12-16 17:20:51]     "pilotErrorCode": 0,
[2025-12-16 17:20:51]     "pilotErrorDiag": "",
[2025-12-16 17:20:51]  *** Listing of results directory ***
[2025-12-16 17:20:51] total 379568
[2025-12-16 17:20:51] -rw-r--r-- 1 boinc boinc    579449 Dec 15 04:37 pilot3.tar.gz
[2025-12-16 17:20:51] -rwx------ 1 boinc boinc     36322 Dec 15 04:37 runpilot2-wrapper.sh
[2025-12-16 17:20:51] -rw-r--r-- 1 boinc boinc      5112 Dec 15 04:37 queuedata.json
[2025-12-16 17:20:51] -rw-r--r-- 1 boinc boinc       100 Dec 16 14:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 17:20:51] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 14:32 run_atlas
[2025-12-16 17:20:51] -rw-r--r-- 1 boinc boinc       105 Dec 16 14:32 job.xml
[2025-12-16 17:20:51] -rw-r--r-- 1 boinc boinc      6692 Dec 16 14:32 init_data.xml
[2025-12-16 17:20:51] -rw-r--r-- 2 boinc boinc 199232986 Dec 16 14:32 EVNT.47898875._000109.pool.root.1
[2025-12-16 17:20:51] -rw-r--r-- 2 boinc boinc     15847 Dec 16 14:32 start_atlas.sh
[2025-12-16 17:20:51] drwxrwx--x 2 boinc boinc      4096 Dec 16 14:32 shared
[2025-12-16 17:20:51] -rw-r--r-- 2 boinc boinc    592389 Dec 16 14:32 input.tar.gz
[2025-12-16 17:20:51] -rw-r--r-- 1 boinc boinc         0 Dec 16 14:32 boinc_lockfile
[2025-12-16 17:20:51] -rw-r--r-- 1 boinc boinc      2500 Dec 16 14:32 pandaJob.out
[2025-12-16 17:20:51] -rw------- 1 boinc boinc    987355 Dec 16 14:32 agis_schedconf.cvmfs.json
[2025-12-16 17:20:51] -rw------- 1 boinc boinc   1516240 Dec 16 14:32 agis_ddmendpoints.agis.ALL.json
[2025-12-16 17:20:51] drwx------ 5 boinc boinc      4096 Dec 16 14:32 pilot3
[2025-12-16 17:20:51] -rw-r--r-- 1 boinc boinc       529 Dec 16 17:10 boinc_task_state.xml
[2025-12-16 17:20:51] -rw------- 1 boinc boinc 182207267 Dec 16 17:10 HITS.47898878._002741.pool.root.1
[2025-12-16 17:20:51] -rw------- 1 boinc boinc      1027 Dec 16 17:10 memory_monitor_summary.json
[2025-12-16 17:20:51] -rw------- 1 boinc boinc    328175 Dec 16 17:11 log.47898878._002741.job.log.tgz.1
[2025-12-16 17:20:51] -rw------- 1 boinc boinc        95 Dec 16 17:11 pilot_heartbeat.json
[2025-12-16 17:20:51] -rw------- 1 boinc boinc      7780 Dec 16 17:11 heartbeat.json
[2025-12-16 17:20:51] -rw------- 1 boinc boinc      5093 Dec 16 17:11 pilotlog.txt
[2025-12-16 17:20:51] -rw------- 1 boinc boinc   1333036 Dec 16 17:11 log.47898878._002741.job.log.1
[2025-12-16 17:20:51] -rw------- 1 boinc boinc       357 Dec 16 17:11 output.list
[2025-12-16 17:20:51] -rw-r--r-- 1 boinc boinc       620 Dec 16 17:11 runtime_log
[2025-12-16 17:20:51] -rw------- 1 boinc boinc   1679360 Dec 16 17:11 result.tar.gz
[2025-12-16 17:20:51] -rw-r--r-- 1 boinc boinc      9222 Dec 16 17:11 runtime_log.err
[2025-12-16 17:20:51] -rw------- 1 boinc boinc       664 Dec 16 17:11 A2NNDmsZEp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkxWKDm4v9yXo.diag
[2025-12-16 17:20:51] -rw-r--r-- 1 boinc boinc      8192 Dec 16 17:20 boinc_mmap_file
[2025-12-16 17:20:51] -rw-r--r-- 1 boinc boinc        26 Dec 16 17:20 wrapper_checkpoint.txt
[2025-12-16 17:20:51] -rw-r--r-- 1 boinc boinc     20851 Dec 16 17:20 stderr.txt
[2025-12-16 17:20:51] HITS file was successfully produced:
[2025-12-16 17:20:51] -rw------- 1 boinc boinc 182207267 Dec 16 17:10 shared/HITS.pool.root.1
[2025-12-16 17:20:51]  *** Contents of shared directory: ***
[2025-12-16 17:20:51] total 374748
[2025-12-16 17:20:51] -rw-r--r-- 2 boinc boinc 199232986 Dec 16 14:32 ATLAS.root_0
[2025-12-16 17:20:51] -rw-r--r-- 2 boinc boinc     15847 Dec 16 14:32 start_atlas.sh
[2025-12-16 17:20:51] -rw-r--r-- 2 boinc boinc    592389 Dec 16 14:32 input.tar.gz
[2025-12-16 17:20:51] -rw------- 1 boinc boinc 182207267 Dec 16 17:10 HITS.pool.root.1
[2025-12-16 17:20:51] -rw------- 1 boinc boinc   1679360 Dec 16 17:11 result.tar.gz
17:20:53 (1099953): run_atlas exited; CPU time 37324.880646
17:20:53 (1099953): called boinc_finish(0)

</stderr_txt>
]]>

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