Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:23:33 (2773996): wrapper (7.7.26015): starting
12:23:33 (2773996): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 12:23:33] Arguments: --nthreads 4
[2025-12-16 12:23:33] Threads: 4
[2025-12-16 12:23:33] Checking for CVMFS
[2025-12-16 12:23:33] No cvmfs_config command found, will try listing directly
[2025-12-16 12:23:33] CVMFS is ok
[2025-12-16 12:23:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 12:23:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 12:23:33] Further information can be found at the LHC@home message board.
[2025-12-16 12:23:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 12:23:33] Checking for apptainer binary...
[2025-12-16 12:23:33] which: no apptainer in ((null))
[2025-12-16 12:23:33] apptainer is not installed, using version from CVMFS
[2025-12-16 12:23:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 12:23:33] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-12-16 12:23:33] apptainer works
[2025-12-16 12:23:33] Set ATHENA_PROC_NUMBER=4
[2025-12-16 12:23:33] Set ATHENA_CORE_NUMBER=4
[2025-12-16 12:23:33] Starting ATLAS job with PandaID=6929467298
[2025-12-16 12:23:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 16:57:23]  *** The last 200 lines of the pilot log: ***
[2025-12-16 16:57:23] 2025-12-16 15:17:04,350 | INFO     | number of running child processes to parent process 2786862: 1
[2025-12-16 16:57:23] 2025-12-16 15:17:04,350 | INFO     | maximum number of monitored processes: 6
[2025-12-16 16:57:23] 2025-12-16 15:17:04,397 | INFO     | time since job start (13995s) is within the limit (174528.0s)
[2025-12-16 16:57:23] 2025-12-16 15:17:06,403 | INFO     | time since job start (13997s) is within the limit (174528.0s)
[2025-12-16 16:57:23] 2025-12-16 15:17:06,854 | INFO     | monitor loop #946: job 0:6929467298 is in state 'finished'
[2025-12-16 16:57:23] 2025-12-16 15:17:06,854 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 16:57:23] 2025-12-16 15:17:08,409 | INFO     | time since job start (13999s) is within the limit (174528.0s)
[2025-12-16 16:57:23] 2025-12-16 15:17:09,358 | INFO     | monitor loop #947: job 0:6929467298 is in state 'finished'
[2025-12-16 16:57:23] 2025-12-16 15:17:09,358 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 16:57:23] 2025-12-16 15:17:09,964 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 16:57:23] 2025-12-16 15:17:09,985 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2669.7476640624977
[2025-12-16 16:57:23] 2025-12-16 15:17:10,011 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6929467298/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 16:57:23] 2025-12-16 15:17:10,011 | INFO     | extracted standard info from prmon json
[2025-12-16 16:57:23] 2025-12-16 15:17:10,011 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 16:57:23] 2025-12-16 15:17:10,011 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 16:57:23] 2025-12-16 15:17:10,012 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 16:57:23] 2025-12-16 15:17:10,012 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 16:57:23] 2025-12-16 15:17:10,017 | INFO     | fitting pss+swap vs Time
[2025-12-16 16:57:23] 2025-12-16 15:17:10,018 | INFO     | sum of square deviations: 3723716330.0
[2025-12-16 16:57:23] 2025-12-16 15:17:10,019 | INFO     | sum of deviations: -26670540291.999992
[2025-12-16 16:57:23] 2025-12-16 15:17:10,019 | INFO     | mean x: 1765891219.0
[2025-12-16 16:57:23] 2025-12-16 15:17:10,020 | INFO     | mean y: 2355346.572052402
[2025-12-16 16:57:23] 2025-12-16 15:17:10,020 | INFO     | intersect: 12650277135.938988
[2025-12-16 16:57:23] 2025-12-16 15:17:10,020 | INFO     | chi2: 1.4350284376438769
[2025-12-16 16:57:23] 2025-12-16 15:17:10,020 | INFO     | sum of square deviations: 3485088600.0
[2025-12-16 16:57:23] 2025-12-16 15:17:10,022 | INFO     | sum of deviations: -26015553432.499996
[2025-12-16 16:57:23] 2025-12-16 15:17:10,022 | INFO     | mean x: 1765891066.5
[2025-12-16 16:57:23] 2025-12-16 15:17:10,022 | INFO     | mean y: 2355765.066964286
[2025-12-16 16:57:23] 2025-12-16 15:17:10,022 | INFO     | intersect: 13184411852.96819
[2025-12-16 16:57:23] 2025-12-16 15:17:10,023 | INFO     | chi2: 1.4325789432652172
[2025-12-16 16:57:23] 2025-12-16 15:17:10,023 | INFO     | current chi2=1.4325789432652172 (change=0.1706930897259047 %)
[2025-12-16 16:57:23] 2025-12-16 15:17:10,023 | INFO     | right removable region: 223
[2025-12-16 16:57:23] 2025-12-16 15:17:10,023 | INFO     | sum of square deviations: 3485088600.0
[2025-12-16 16:57:23] 2025-12-16 15:17:10,025 | INFO     | sum of deviations: -50278456145.99999
[2025-12-16 16:57:23] 2025-12-16 15:17:10,025 | INFO     | mean x: 1765891371.5
[2025-12-16 16:57:23] 2025-12-16 15:17:10,025 | INFO     | mean y: 2370205.5803571427
[2025-12-16 16:57:23] 2025-12-16 15:17:10,025 | INFO     | intersect: 25478420335.42857
[2025-12-16 16:57:23] 2025-12-16 15:17:10,025 | INFO     | chi2: 0.20989121012530015
[2025-12-16 16:57:23] 2025-12-16 15:17:10,026 | INFO     | current chi2=0.20989121012530015 (change=85.37372468590844 %)
[2025-12-16 16:57:23] 2025-12-16 15:17:10,026 | INFO     | sum of square deviations: 3256879670.0
[2025-12-16 16:57:23] 2025-12-16 15:17:10,027 | INFO     | sum of deviations: -42099758840.999985
[2025-12-16 16:57:23] 2025-12-16 15:17:10,027 | INFO     | mean x: 1765891524.0
[2025-12-16 16:57:23] 2025-12-16 15:17:10,028 | INFO     | mean y: 2364736.694063927
[2025-12-16 16:57:23] 2025-12-16 15:17:10,028 | INFO     | intersect: 22829000913.819374
[2025-12-16 16:57:23] 2025-12-16 15:17:10,028 | INFO     | chi2: 0.1918235601594597
[2025-12-16 16:57:23] 2025-12-16 15:17:10,028 | INFO     | current chi2=0.1918235601594597 (change=8.608102242611535 %)
[2025-12-16 16:57:23] 2025-12-16 15:17:10,028 | INFO     | left removable region: 20
[2025-12-16 16:57:23] 2025-12-16 15:17:10,029 | INFO     | sum of square deviations: 2593916542.0
[2025-12-16 16:57:23] 2025-12-16 15:17:10,030 | INFO     | sum of deviations: -22969732573.000004
[2025-12-16 16:57:23] 2025-12-16 15:17:10,030 | INFO     | mean x: 1765891646.0
[2025-12-16 16:57:23] 2025-12-16 15:17:10,030 | INFO     | mean y: 2351871.0837438423
[2025-12-16 16:57:23] 2025-12-16 15:17:10,030 | INFO     | intersect: 15639731950.490627
[2025-12-16 16:57:23] 2025-12-16 15:17:10,031 | INFO     | chi2: 0.11381802137893345
[2025-12-16 16:57:23] 2025-12-16 15:17:10,031 | INFO     | current memory leak: -8.86 B/s (using 203 data points, chi2=0.11)
[2025-12-16 16:57:23] 2025-12-16 15:17:10,031 | INFO     | could have reported an average CPU frequency of 2670 MHz (11 samples)
[2025-12-16 16:57:23] 2025-12-16 15:17:10,031 | INFO     | ..............................
[2025-12-16 16:57:23] 2025-12-16 15:17:10,031 | INFO     | . Timing measurements:
[2025-12-16 16:57:23] 2025-12-16 15:17:10,032 | INFO     | . get job = 0 s
[2025-12-16 16:57:23] 2025-12-16 15:17:10,032 | INFO     | . initial setup = 1 s
[2025-12-16 16:57:23] 2025-12-16 15:17:10,032 | INFO     | . payload setup = 9 s
[2025-12-16 16:57:23] 2025-12-16 15:17:10,032 | INFO     | . stage-in = 0 s
[2025-12-16 16:57:23] 2025-12-16 15:17:10,032 | INFO     | . payload execution = 13957 s
[2025-12-16 16:57:23] 2025-12-16 15:17:10,032 | INFO     | . stage-out = 1 s
[2025-12-16 16:57:23] 2025-12-16 15:17:10,032 | INFO     | . log creation = 0 s
[2025-12-16 16:57:23] 2025-12-16 15:17:10,032 | INFO     | ..............................
[2025-12-16 16:57:23] 2025-12-16 15:17:10,129 | INFO     | 
[2025-12-16 16:57:23] 2025-12-16 15:17:10,129 | INFO     | job summary report
[2025-12-16 16:57:23] 2025-12-16 15:17:10,129 | INFO     | --------------------------------------------------
[2025-12-16 16:57:23] 2025-12-16 15:17:10,129 | INFO     | PanDA job id: 6929467298
[2025-12-16 16:57:23] 2025-12-16 15:17:10,129 | INFO     | task id: 47898763
[2025-12-16 16:57:23] 2025-12-16 15:17:10,129 | INFO     | errors: (none)
[2025-12-16 16:57:23] 2025-12-16 15:17:10,129 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 16:57:23] 2025-12-16 15:17:10,130 | INFO     | pilot state: finished 
[2025-12-16 16:57:23] 2025-12-16 15:17:10,130 | INFO     | transexitcode: 0
[2025-12-16 16:57:23] 2025-12-16 15:17:10,130 | INFO     | exeerrorcode: 0
[2025-12-16 16:57:23] 2025-12-16 15:17:10,130 | INFO     | exeerrordiag: 
[2025-12-16 16:57:23] 2025-12-16 15:17:10,130 | INFO     | exitcode: 0
[2025-12-16 16:57:23] 2025-12-16 15:17:10,130 | INFO     | exitmsg: OK
[2025-12-16 16:57:23] 2025-12-16 15:17:10,130 | INFO     | cpuconsumptiontime: 53885 s
[2025-12-16 16:57:23] 2025-12-16 15:17:10,130 | INFO     | nevents: 400
[2025-12-16 16:57:23] 2025-12-16 15:17:10,130 | INFO     | neventsw: 0
[2025-12-16 16:57:23] 2025-12-16 15:17:10,130 | INFO     | pid: 2786862
[2025-12-16 16:57:23] 2025-12-16 15:17:10,130 | INFO     | pgrp: 2786862
[2025-12-16 16:57:23] 2025-12-16 15:17:10,130 | INFO     | corecount: 4
[2025-12-16 16:57:23] 2025-12-16 15:17:10,130 | INFO     | event service: False
[2025-12-16 16:57:23] 2025-12-16 15:17:10,130 | INFO     | sizes: {0: 2283797, 1: 2283996, 8: 2284258, 11: 2284286, 13969: 2315369, 13970: 2315368, 13971: 2324574, 13974: 2324630, 13981: 2324824}
[2025-12-16 16:57:23] 2025-12-16 15:17:10,130 | INFO     | --------------------------------------------------
[2025-12-16 16:57:23] 2025-12-16 15:17:10,131 | INFO     | 
[2025-12-16 16:57:23] 2025-12-16 15:17:10,131 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2025-12-16 16:57:23] 2025-12-16 15:17:10,161 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 16:57:23] 2025-12-16 15:17:10,161 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 16:57:23] 2025-12-16 15:17:10,161 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 16:57:23] 2025-12-16 15:17:10,161 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 16:57:23] 2025-12-16 15:17:10,161 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 16:57:23] 2025-12-16 15:17:10,161 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 16:57:23] 2025-12-16 15:17:10,161 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 16:57:23] 2025-12-16 15:17:10,162 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 16:57:23] 2025-12-16 15:17:10,162 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 16:57:23] 2025-12-16 15:17:10,162 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 16:57:23] 2025-12-16 15:17:10,162 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 16:57:23] 2025-12-16 15:17:10,162 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 16:57:23] 2025-12-16 15:17:10,162 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 16:57:23] 2025-12-16 15:17:10,165 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 16:57:23] 2025-12-16 15:17:10,165 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 16:57:23] 2025-12-16 15:17:10,165 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 16:57:23] 2025-12-16 15:17:10,165 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 16:57:23] 2025-12-16 15:17:10,165 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 16:57:23] 2025-12-16 15:17:10,166 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 16:57:23] 2025-12-16 15:17:10,166 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 16:57:23] 2025-12-16 15:17:10,166 | INFO     | job 6929467298 has completed (purged errors)
[2025-12-16 16:57:23] 2025-12-16 15:17:10,166 | INFO     | overall cleanup function is called
[2025-12-16 16:57:23] 2025-12-16 15:17:11,175 | INFO     | --- collectZombieJob: --- 10, [2786862]
[2025-12-16 16:57:23] 2025-12-16 15:17:11,175 | INFO     | zombie collector waiting for pid 2786862
[2025-12-16 16:57:23] 2025-12-16 15:17:11,175 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 16:57:23] 2025-12-16 15:17:11,175 | INFO     | collected zombie processes
[2025-12-16 16:57:23] 2025-12-16 15:17:11,175 | INFO     | will attempt to kill all subprocesses of pid=2786862
[2025-12-16 16:57:23] 2025-12-16 15:17:12,024 | INFO     | process IDs to be killed: [2786862] (in reverse order)
[2025-12-16 16:57:23] 2025-12-16 15:17:12,278 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 16:57:23] 2025-12-16 15:17:12,279 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 16:57:23] 2025-12-16 15:17:12,314 | INFO     | did not find any defunct processes belonging to 2786862
[2025-12-16 16:57:23] 2025-12-16 15:17:12,349 | INFO     | did not find any defunct processes belonging to 2786862
[2025-12-16 16:57:23] 2025-12-16 15:17:12,350 | INFO     | ready for new job
[2025-12-16 16:57:23] 2025-12-16 15:17:12,350 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 16:57:23] 2025-12-16 15:17:12,353 | INFO     | ***************************************
[2025-12-16 16:57:23] 2025-12-16 15:17:12,353 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 16:57:23] 2025-12-16 15:17:12,353 | INFO     | ***************************************
[2025-12-16 16:57:23] 2025-12-16 15:17:12,353 | INFO     | 
[2025-12-16 16:57:23] 2025-12-16 15:17:12,361 | INFO     | architecture information:
[2025-12-16 16:57:23] 2025-12-16 15:17:12,362 | INFO     | executing command: cat /etc/os-release
[2025-12-16 16:57:23] 2025-12-16 15:17:12,384 | INFO     | cat /etc/os-release:
[2025-12-16 16:57:23] NAME="CentOS Linux"
[2025-12-16 16:57:23] VERSION="7 (Core)"
[2025-12-16 16:57:23] ID="centos"
[2025-12-16 16:57:23] ID_LIKE="rhel fedora"
[2025-12-16 16:57:23] VERSION_ID="7"
[2025-12-16 16:57:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 16:57:23] ANSI_COLOR="0;31"
[2025-12-16 16:57:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 16:57:23] HOME_URL="https://www.centos.org/"
[2025-12-16 16:57:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 16:57:23] 
[2025-12-16 16:57:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 16:57:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 16:57:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 16:57:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 16:57:23] 
[2025-12-16 16:57:23] 2025-12-16 15:17:12,385 | INFO     | ***************************************
[2025-12-16 16:57:23] 2025-12-16 15:17:12,888 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2025-12-16 16:57:23] 2025-12-16 15:17:12,942 | INFO     | sufficient remaining disk space (3341346144256 B)
[2025-12-16 16:57:23] 2025-12-16 15:17:12,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 16:57:23] 2025-12-16 15:17:12,946 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 16:57:23] 2025-12-16 15:17:12,946 | INFO     | update_server=False
[2025-12-16 16:57:23] 2025-12-16 15:17:12,946 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 16:57:23] 2025-12-16 15:17:12,946 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 16:57:23] 2025-12-16 15:17:12,946 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 16:57:23] 2025-12-16 15:17:12,947 | INFO     | aborting loop
[2025-12-16 16:57:23] 2025-12-16 15:17:12,947 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 16:57:23] 2025-12-16 15:17:13,608 | INFO     | all data control threads have been joined
[2025-12-16 16:57:23] 2025-12-16 15:17:13,804 | INFO     | all payload control threads have been joined
[2025-12-16 16:57:23] 2025-12-16 15:17:13,948 | INFO     | [job] job monitor thread has finished
[2025-12-16 16:57:23] 2025-12-16 15:17:13,951 | INFO     | [job] retrieve thread has finished
[2025-12-16 16:57:23] 2025-12-16 15:17:14,021 | INFO     | [payload] validate_post thread has finished
[2025-12-16 16:57:23] 2025-12-16 15:17:14,083 | INFO     | all job control threads have been joined
[2025-12-16 16:57:23] 2025-12-16 15:17:14,096 | INFO     | [job] validate thread has finished
[2025-12-16 16:57:23] 2025-12-16 15:17:14,119 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 16:57:23] 2025-12-16 15:17:14,362 | INFO     | [data] copytool_in thread has finished
[2025-12-16 16:57:23] 2025-12-16 15:17:14,429 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 16:57:23] 2025-12-16 15:17:14,514 | INFO     | [payload] failed_post thread has finished
[2025-12-16 16:57:23] 2025-12-16 15:17:14,610 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 16:57:23] 2025-12-16 15:17:14,614 | INFO     | [data] control thread has finished
[2025-12-16 16:57:23] 2025-12-16 15:17:14,779 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 16:57:23] 2025-12-16 15:17:14,809 | INFO     | [payload] control thread has finished
[2025-12-16 16:57:23] 2025-12-16 15:17:14,954 | INFO     | [data] copytool_out thread has finished
[2025-12-16 16:57:23] 2025-12-16 15:17:15,084 | INFO     | [job] control thread has finished
[2025-12-16 16:57:23] 2025-12-16 15:17:15,135 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 16:57:23] 2025-12-16 15:17:16,141 | INFO     | [job] queue monitor thread has finished
[2025-12-16 16:57:23] 2025-12-16 15:17:16,953 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 16:57:23] 2025-12-16 15:17:42,499 | INFO     | PID=2778308 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-16 16:57:23] 2025-12-16 15:17:42,499 | INFO     | .. there are 9 such processes running
[2025-12-16 16:57:23] 2025-12-16 15:17:42,500 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 16:57:23] 2025-12-16 15:17:42,500 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 16:57:23] 2025-12-16 15:17:42,500 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 16:57:23] 2025-12-16 15:18:12,617 | INFO     | [monitor] cgroup control has ended
[2025-12-16 16:57:23] 2025-12-16 15:18:13,569 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23383477499712)>', '<ExcThread(monitor, started 23383232169728)>']
[2025-12-16 16:57:23] 2025-12-16 15:18:13,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 16:57:23] 2025-12-16 15:18:13,651 | INFO     | [monitor] control thread has ended
[2025-12-16 16:57:23] 2025-12-16 15:18:18,594 | INFO     | all workflow threads have been joined
[2025-12-16 16:57:23] 2025-12-16 15:18:18,594 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 16:57:23] 2025-12-16 15:18:18,594 | INFO     | traces error code: 0
[2025-12-16 16:57:23] 2025-12-16 15:18:18,594 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 16:57:23] 2025-12-16 15:18:18,845 [wrapper] ==== pilot stdout END ====
[2025-12-16 16:57:23] 2025-12-16 15:18:18,849 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 16:57:23] 2025-12-16 15:18:18,853 [wrapper] pilotpid: 2778308
[2025-12-16 16:57:23] 2025-12-16 15:18:18,858 [wrapper] Pilot exit status: 0
[2025-12-16 16:57:23] 2025-12-16 15:18:18,874 [wrapper] pandaids: 6929467298
[2025-12-16 16:57:23] 2025-12-16 15:18:19,054 [wrapper] cleanup supervisor_pilot 3271530 2778309
[2025-12-16 16:57:23] 2025-12-16 15:18:19,059 [wrapper] Test setup, not cleaning
[2025-12-16 16:57:23] 2025-12-16 15:18:19,063 [wrapper] apfmon messages muted
[2025-12-16 16:57:23] 2025-12-16 15:18:19,067 [wrapper] ==== wrapper stdout END ====
[2025-12-16 16:57:23] 2025-12-16 15:18:19,071 [wrapper] ==== wrapper stderr END ====
[2025-12-16 16:57:23]  *** Error codes and diagnostics ***
[2025-12-16 16:57:23]     "exeErrorCode": 0,
[2025-12-16 16:57:23]     "exeErrorDiag": "",
[2025-12-16 16:57:23]     "pilotErrorCode": 0,
[2025-12-16 16:57:23]     "pilotErrorDiag": "",
[2025-12-16 16:57:23]  *** Listing of results directory ***
[2025-12-16 16:57:23] total 438652
[2025-12-16 16:57:23] -rw-r--r-- 1 boinc boinc      5112 Dec 14 21:38 queuedata.json
[2025-12-16 16:57:23] -rw-r--r-- 1 boinc boinc    579449 Dec 14 21:38 pilot3.tar.gz
[2025-12-16 16:57:23] -rwx------ 1 boinc boinc     36322 Dec 14 21:38 runpilot2-wrapper.sh
[2025-12-16 16:57:23] -rw-r--r-- 1 boinc boinc       100 Dec 16 12:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 16:57:23] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 12:23 run_atlas
[2025-12-16 16:57:23] -rw-r--r-- 1 boinc boinc       105 Dec 16 12:23 job.xml
[2025-12-16 16:57:23] -rw-r--r-- 1 boinc boinc      6692 Dec 16 12:23 init_data.xml
[2025-12-16 16:57:23] -rw-r--r-- 2 boinc boinc 222584230 Dec 16 12:23 EVNT.47898761._000551.pool.root.1
[2025-12-16 16:57:23] -rw-r--r-- 2 boinc boinc     15847 Dec 16 12:23 start_atlas.sh
[2025-12-16 16:57:23] drwxrwx--x 2 boinc boinc      4096 Dec 16 12:23 shared
[2025-12-16 16:57:23] -rw-r--r-- 2 boinc boinc    592395 Dec 16 12:23 input.tar.gz
[2025-12-16 16:57:23] -rw-r--r-- 1 boinc boinc         0 Dec 16 12:23 boinc_lockfile
[2025-12-16 16:57:23] -rw-r--r-- 1 boinc boinc      2506 Dec 16 12:23 pandaJob.out
[2025-12-16 16:57:23] -rw------- 1 boinc boinc    991017 Dec 16 12:23 agis_schedconf.cvmfs.json
[2025-12-16 16:57:23] drwx------ 5 boinc boinc      4096 Dec 16 12:23 pilot3
[2025-12-16 16:57:23] -rw------- 1 boinc boinc 218009506 Dec 16 16:16 HITS.47898763._012519.pool.root.1
[2025-12-16 16:57:23] -rw-r--r-- 1 boinc boinc       529 Dec 16 16:16 boinc_task_state.xml
[2025-12-16 16:57:23] -rw------- 1 boinc boinc      1029 Dec 16 16:16 memory_monitor_summary.json
[2025-12-16 16:57:23] -rw------- 1 boinc boinc   1516240 Dec 16 16:16 agis_ddmendpoints.agis.ALL.json
[2025-12-16 16:57:23] -rw------- 1 boinc boinc    405963 Dec 16 16:16 log.47898763._012519.job.log.tgz.1
[2025-12-16 16:57:23] -rw------- 1 boinc boinc      7785 Dec 16 16:17 heartbeat.json
[2025-12-16 16:57:23] -rw------- 1 boinc boinc        95 Dec 16 16:17 pilot_heartbeat.json
[2025-12-16 16:57:23] -rw------- 1 boinc boinc      4836 Dec 16 16:18 pilotlog.txt
[2025-12-16 16:57:23] -rw------- 1 boinc boinc   1932338 Dec 16 16:18 log.47898763._012519.job.log.1
[2025-12-16 16:57:23] -rw------- 1 boinc boinc       357 Dec 16 16:18 output.list
[2025-12-16 16:57:23] -rw-r--r-- 1 boinc boinc       620 Dec 16 16:18 runtime_log
[2025-12-16 16:57:23] -rw------- 1 boinc boinc   2355200 Dec 16 16:18 result.tar.gz
[2025-12-16 16:57:23] -rw-r--r-- 1 boinc boinc      9223 Dec 16 16:18 runtime_log.err
[2025-12-16 16:57:23] -rw------- 1 boinc boinc       667 Dec 16 16:18 hsHNDmE27o8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPIWKDm4FDurn.diag
[2025-12-16 16:57:23] -rw-r--r-- 1 boinc boinc        26 Dec 16 16:57 wrapper_checkpoint.txt
[2025-12-16 16:57:23] -rw-r--r-- 1 boinc boinc      8192 Dec 16 16:57 boinc_mmap_file
[2025-12-16 16:57:23] -rw-r--r-- 1 boinc boinc     21132 Dec 16 16:57 stderr.txt
[2025-12-16 16:57:23] HITS file was successfully produced:
[2025-12-16 16:57:23] -rw------- 1 boinc boinc 218009506 Dec 16 16:16 shared/HITS.pool.root.1
[2025-12-16 16:57:23]  *** Contents of shared directory: ***
[2025-12-16 16:57:23] total 433172
[2025-12-16 16:57:23] -rw-r--r-- 2 boinc boinc 222584230 Dec 16 12:23 ATLAS.root_0
[2025-12-16 16:57:23] -rw-r--r-- 2 boinc boinc     15847 Dec 16 12:23 start_atlas.sh
[2025-12-16 16:57:23] -rw-r--r-- 2 boinc boinc    592395 Dec 16 12:23 input.tar.gz
[2025-12-16 16:57:23] -rw------- 1 boinc boinc 218009506 Dec 16 16:16 HITS.pool.root.1
[2025-12-16 16:57:23] -rw------- 1 boinc boinc   2355200 Dec 16 16:18 result.tar.gz
16:57:24 (2773996): run_atlas exited; CPU time 54848.995141
16:57:24 (2773996): called boinc_finish(0)

</stderr_txt>
]]>

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