Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:49:13 (23779): wrapper (7.7.26015): starting
06:49:13 (23779): wrapper: running run_atlas (--nthreads 8)
[2025-12-15 06:49:13] Arguments: --nthreads 8
[2025-12-15 06:49:13] Threads: 8
[2025-12-15 06:49:13] Checking for CVMFS
[2025-12-15 06:49:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 06:49:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 06:49:13] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 06:49:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 06:49:13] 2.11.4.0 31920 9884 66216 154031 0 59 18036247 18432001 1833 130560 0 6726992 99.993 299576 38585 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-15 06:49:13] CVMFS is ok
[2025-12-15 06:49:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 06:49:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 06:49:13] Further information can be found at the LHC@home message board.
[2025-12-15 06:49:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 06:49:13] Checking for apptainer binary...
[2025-12-15 06:49:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 06:49:13] Running /usr/bin/apptainer --version
[2025-12-15 06:49:13] apptainer version 1.3.2-1.el7
[2025-12-15 06:49:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 06:49:14] c-206-22.aglt2.org
[2025-12-15 06:49:14] apptainer works
[2025-12-15 06:49:14] Set ATHENA_PROC_NUMBER=8
[2025-12-15 06:49:14] Set ATHENA_CORE_NUMBER=8
[2025-12-15 06:49:14] Starting ATLAS job with PandaID=6929482464
[2025-12-15 06:49:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 11:16:58]  *** The last 200 lines of the pilot log: ***
[2025-12-15 11:16:58] 2025-12-15 16:16:14,038 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-15 11:16:58] 2025-12-15 16:16:14,077 | INFO     | monitor loop #1148: job 0:6929482464 is in state 'finished'
[2025-12-15 11:16:58] 2025-12-15 16:16:14,077 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 11:16:58] 2025-12-15 16:16:14,277 | INFO     | PID=27779 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-15 11:16:58] 2025-12-15 16:16:14,278 | INFO     | .. there are 3 such processes running
[2025-12-15 11:16:58] 2025-12-15 16:16:15,279 | INFO     | time since job start (16009s) is within the limit (174528.0s)
[2025-12-15 11:16:58] 2025-12-15 16:16:16,580 | INFO     | monitor loop #1149: job 0:6929482464 is in state 'finished'
[2025-12-15 11:16:58] 2025-12-15 16:16:16,580 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 11:16:58] 2025-12-15 16:16:17,285 | INFO     | time since job start (16011s) is within the limit (174528.0s)
[2025-12-15 11:16:58] 2025-12-15 16:16:18,349 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-15 11:16:58] 2025-12-15 16:16:18,353 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2461.2916666666665
[2025-12-15 11:16:58] 2025-12-15 16:16:18,355 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929482464/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 11:16:58] 2025-12-15 16:16:18,356 | INFO     | extracted standard info from prmon json
[2025-12-15 11:16:58] 2025-12-15 16:16:18,356 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 11:16:58] 2025-12-15 16:16:18,356 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 11:16:58] 2025-12-15 16:16:18,356 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 11:16:58] 2025-12-15 16:16:18,356 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 11:16:58] 2025-12-15 16:16:18,360 | INFO     | fitting pss+swap vs Time
[2025-12-15 11:16:58] 2025-12-15 16:16:18,360 | INFO     | sum of square deviations: 5576683165.5
[2025-12-15 11:16:58] 2025-12-15 16:16:18,362 | INFO     | sum of deviations: -19816640743.00001
[2025-12-15 11:16:58] 2025-12-15 16:16:18,362 | INFO     | mean x: 1765807351.5
[2025-12-15 11:16:58] 2025-12-15 16:16:18,362 | INFO     | mean y: 2513434.748091603
[2025-12-15 11:16:58] 2025-12-15 16:16:18,362 | INFO     | intersect: 6277277280.487652
[2025-12-15 11:16:58] 2025-12-15 16:16:18,363 | INFO     | chi2: 1.6208111404300474
[2025-12-15 11:16:58] 2025-12-15 16:16:18,363 | INFO     | sum of square deviations: 5263458688.0
[2025-12-15 11:16:58] 2025-12-15 16:16:18,365 | INFO     | sum of deviations: -19153601486.999992
[2025-12-15 11:16:58] 2025-12-15 16:16:18,365 | INFO     | mean x: 1765807199.0
[2025-12-15 11:16:58] 2025-12-15 16:16:18,365 | INFO     | mean y: 2513757.2684824904
[2025-12-15 11:16:58] 2025-12-15 16:16:18,365 | INFO     | intersect: 6428244326.719033
[2025-12-15 11:16:58] 2025-12-15 16:16:18,365 | INFO     | chi2: 1.620166785133643
[2025-12-15 11:16:58] 2025-12-15 16:16:18,365 | INFO     | current chi2=1.620166785133643 (change=0.03975511275381662 %)
[2025-12-15 11:16:58] 2025-12-15 16:16:18,365 | INFO     | right removable region: 256
[2025-12-15 11:16:58] 2025-12-15 16:16:18,366 | INFO     | sum of square deviations: 5263458688.0
[2025-12-15 11:16:58] 2025-12-15 16:16:18,369 | INFO     | sum of deviations: -58013826923.0
[2025-12-15 11:16:58] 2025-12-15 16:16:18,369 | INFO     | mean x: 1765807504.0
[2025-12-15 11:16:58] 2025-12-15 16:16:18,369 | INFO     | mean y: 2531864.8754863814
[2025-12-15 11:16:58] 2025-12-15 16:16:18,369 | INFO     | intersect: 19465257230.221916
[2025-12-15 11:16:58] 2025-12-15 16:16:18,370 | INFO     | chi2: 0.23274760592206525
[2025-12-15 11:16:58] 2025-12-15 16:16:18,370 | INFO     | current chi2=0.23274760592206525 (change=85.64005391397356 %)
[2025-12-15 11:16:58] 2025-12-15 16:16:18,370 | INFO     | sum of square deviations: 4962187923.0
[2025-12-15 11:16:58] 2025-12-15 16:16:18,373 | INFO     | sum of deviations: -58682750208.49999
[2025-12-15 11:16:58] 2025-12-15 16:16:18,373 | INFO     | mean x: 1765807656.5
[2025-12-15 11:16:58] 2025-12-15 16:16:18,373 | INFO     | mean y: 2532178.027777778
[2025-12-15 11:16:58] 2025-12-15 16:16:18,373 | INFO     | intersect: 20884943572.07249
[2025-12-15 11:16:58] 2025-12-15 16:16:18,374 | INFO     | chi2: 0.21124559806196708
[2025-12-15 11:16:58] 2025-12-15 16:16:18,374 | INFO     | current chi2=0.21124559806196708 (change=9.238336856318966 %)
[2025-12-15 11:16:58] 2025-12-15 16:16:18,374 | INFO     | left removable region: 20
[2025-12-15 11:16:58] 2025-12-15 16:16:18,375 | INFO     | sum of square deviations: 4075741535.0
[2025-12-15 11:16:58] 2025-12-15 16:16:18,377 | INFO     | sum of deviations: -42868829974.49999
[2025-12-15 11:16:58] 2025-12-15 16:16:18,377 | INFO     | mean x: 1765807778.5
[2025-12-15 11:16:58] 2025-12-15 16:16:18,377 | INFO     | mean y: 2525002.563559322
[2025-12-15 11:16:58] 2025-12-15 16:16:18,378 | INFO     | intersect: 18575369422.19039
[2025-12-15 11:16:58] 2025-12-15 16:16:18,378 | INFO     | chi2: 0.19139108852766856
[2025-12-15 11:16:58] 2025-12-15 16:16:18,378 | INFO     | current memory leak: -10.52 B/s (using 236 data points, chi2=0.19)
[2025-12-15 11:16:58] 2025-12-15 16:16:18,379 | INFO     | could have reported an average CPU frequency of 2592 MHz (12 samples)
[2025-12-15 11:16:58] 2025-12-15 16:16:18,379 | INFO     | ..............................
[2025-12-15 11:16:58] 2025-12-15 16:16:18,379 | INFO     | . Timing measurements:
[2025-12-15 11:16:58] 2025-12-15 16:16:18,380 | INFO     | . get job = 0 s
[2025-12-15 11:16:58] 2025-12-15 16:16:18,380 | INFO     | . initial setup = 2 s
[2025-12-15 11:16:58] 2025-12-15 16:16:18,380 | INFO     | . payload setup = 4 s
[2025-12-15 11:16:58] 2025-12-15 16:16:18,380 | INFO     | . stage-in = 0 s
[2025-12-15 11:16:58] 2025-12-15 16:16:18,380 | INFO     | . payload execution = 15979 s
[2025-12-15 11:16:58] 2025-12-15 16:16:18,380 | INFO     | . stage-out = 2 s
[2025-12-15 11:16:58] 2025-12-15 16:16:18,381 | INFO     | . log creation = 0 s
[2025-12-15 11:16:58] 2025-12-15 16:16:18,381 | INFO     | ..............................
[2025-12-15 11:16:58] 2025-12-15 16:16:18,486 | INFO     | 
[2025-12-15 11:16:58] 2025-12-15 16:16:18,486 | INFO     | job summary report
[2025-12-15 11:16:58] 2025-12-15 16:16:18,486 | INFO     | --------------------------------------------------
[2025-12-15 11:16:58] 2025-12-15 16:16:18,486 | INFO     | PanDA job id: 6929482464
[2025-12-15 11:16:58] 2025-12-15 16:16:18,487 | INFO     | task id: 47898782
[2025-12-15 11:16:58] 2025-12-15 16:16:18,487 | INFO     | errors: (none)
[2025-12-15 11:16:58] 2025-12-15 16:16:18,487 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 11:16:58] 2025-12-15 16:16:18,487 | INFO     | pilot state: finished 
[2025-12-15 11:16:58] 2025-12-15 16:16:18,487 | INFO     | transexitcode: 0
[2025-12-15 11:16:58] 2025-12-15 16:16:18,487 | INFO     | exeerrorcode: 0
[2025-12-15 11:16:58] 2025-12-15 16:16:18,487 | INFO     | exeerrordiag: 
[2025-12-15 11:16:58] 2025-12-15 16:16:18,487 | INFO     | exitcode: 0
[2025-12-15 11:16:58] 2025-12-15 16:16:18,487 | INFO     | exitmsg: OK
[2025-12-15 11:16:58] 2025-12-15 16:16:18,487 | INFO     | cpuconsumptiontime: 120794 s
[2025-12-15 11:16:58] 2025-12-15 16:16:18,488 | INFO     | nevents: 400
[2025-12-15 11:16:58] 2025-12-15 16:16:18,488 | INFO     | neventsw: 0
[2025-12-15 11:16:58] 2025-12-15 16:16:18,488 | INFO     | pid: 1792
[2025-12-15 11:16:58] 2025-12-15 16:16:18,488 | INFO     | pgrp: 1792
[2025-12-15 11:16:58] 2025-12-15 16:16:18,488 | INFO     | corecount: 8
[2025-12-15 11:16:58] 2025-12-15 16:16:18,488 | INFO     | event service: False
[2025-12-15 11:16:58] 2025-12-15 16:16:18,488 | INFO     | sizes: {0: 2283152, 1: 2284008, 2: 2284008, 5: 2284298, 12: 2284354, 15987: 2315836, 15990: 2324834, 15991: 2324890, 15997: 2325084}
[2025-12-15 11:16:58] 2025-12-15 16:16:18,488 | INFO     | --------------------------------------------------
[2025-12-15 11:16:58] 2025-12-15 16:16:18,488 | INFO     | 
[2025-12-15 11:16:58] 2025-12-15 16:16:18,488 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-15 11:16:58] 2025-12-15 16:16:18,514 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 11:16:58] 2025-12-15 16:16:18,514 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 11:16:58] 2025-12-15 16:16:18,515 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 11:16:58] 2025-12-15 16:16:18,515 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 11:16:58] 2025-12-15 16:16:18,515 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 11:16:58] 2025-12-15 16:16:18,515 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 11:16:58] 2025-12-15 16:16:18,515 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 11:16:58] 2025-12-15 16:16:18,515 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 11:16:58] 2025-12-15 16:16:18,515 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 11:16:58] 2025-12-15 16:16:18,515 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 11:16:58] 2025-12-15 16:16:18,515 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 11:16:58] 2025-12-15 16:16:18,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 11:16:58] 2025-12-15 16:16:18,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 11:16:58] 2025-12-15 16:16:18,516 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 11:16:58] 2025-12-15 16:16:18,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 11:16:58] 2025-12-15 16:16:18,516 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 11:16:58] 2025-12-15 16:16:18,516 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 11:16:58] 2025-12-15 16:16:18,516 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 11:16:58] 2025-12-15 16:16:18,516 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 11:16:58] 2025-12-15 16:16:18,516 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 11:16:58] 2025-12-15 16:16:18,517 | INFO     | job 6929482464 has completed (purged errors)
[2025-12-15 11:16:58] 2025-12-15 16:16:18,517 | INFO     | overall cleanup function is called
[2025-12-15 11:16:58] 2025-12-15 16:16:19,524 | INFO     | --- collectZombieJob: --- 10, [1792]
[2025-12-15 11:16:58] 2025-12-15 16:16:19,524 | INFO     | zombie collector waiting for pid 1792
[2025-12-15 11:16:58] 2025-12-15 16:16:19,524 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 11:16:58] 2025-12-15 16:16:19,524 | INFO     | collected zombie processes
[2025-12-15 11:16:58] 2025-12-15 16:16:19,524 | INFO     | will attempt to kill all subprocesses of pid=1792
[2025-12-15 11:16:58] 2025-12-15 16:16:19,696 | INFO     | process IDs to be killed: [1792] (in reverse order)
[2025-12-15 11:16:58] 2025-12-15 16:16:19,741 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 11:16:58] 2025-12-15 16:16:19,742 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 11:16:58] 2025-12-15 16:16:19,747 | INFO     | did not find any defunct processes belonging to 1792
[2025-12-15 11:16:58] 2025-12-15 16:16:19,752 | INFO     | did not find any defunct processes belonging to 1792
[2025-12-15 11:16:58] 2025-12-15 16:16:19,753 | INFO     | ready for new job
[2025-12-15 11:16:58] 2025-12-15 16:16:19,753 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 11:16:58] 2025-12-15 16:16:19,754 | INFO     | ***************************************
[2025-12-15 11:16:58] 2025-12-15 16:16:19,754 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 11:16:58] 2025-12-15 16:16:19,755 | INFO     | ***************************************
[2025-12-15 11:16:59] 2025-12-15 16:16:19,755 | INFO     | 
[2025-12-15 11:16:59] 2025-12-15 16:16:19,756 | INFO     | architecture information:
[2025-12-15 11:16:59] 2025-12-15 16:16:19,756 | INFO     | executing command: cat /etc/os-release
[2025-12-15 11:16:59] 2025-12-15 16:16:19,768 | INFO     | cat /etc/os-release:
[2025-12-15 11:16:59] NAME="CentOS Linux"
[2025-12-15 11:16:59] VERSION="7 (Core)"
[2025-12-15 11:16:59] ID="centos"
[2025-12-15 11:16:59] ID_LIKE="rhel fedora"
[2025-12-15 11:16:59] VERSION_ID="7"
[2025-12-15 11:16:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 11:16:59] ANSI_COLOR="0;31"
[2025-12-15 11:16:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 11:16:59] HOME_URL="https://www.centos.org/"
[2025-12-15 11:16:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 11:16:59] 
[2025-12-15 11:16:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 11:16:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 11:16:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 11:16:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 11:16:59] 
[2025-12-15 11:16:59] 2025-12-15 16:16:19,769 | INFO     | ***************************************
[2025-12-15 11:16:59] 2025-12-15 16:16:20,271 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-15 11:16:59] 2025-12-15 16:16:20,291 | INFO     | sufficient remaining disk space (28356640768 B)
[2025-12-15 11:16:59] 2025-12-15 16:16:20,292 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 11:16:59] 2025-12-15 16:16:20,292 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 11:16:59] 2025-12-15 16:16:20,292 | INFO     | update_server=False
[2025-12-15 11:16:59] 2025-12-15 16:16:20,292 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 11:16:59] 2025-12-15 16:16:20,293 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 11:16:59] 2025-12-15 16:16:20,293 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 11:16:59] 2025-12-15 16:16:20,293 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 11:16:59] 2025-12-15 16:16:20,293 | INFO     | aborting loop
[2025-12-15 11:16:59] 2025-12-15 16:16:20,827 | INFO     | all data control threads have been joined
[2025-12-15 11:16:59] 2025-12-15 16:16:21,064 | INFO     | all job control threads have been joined
[2025-12-15 11:16:59] 2025-12-15 16:16:21,241 | INFO     | all payload control threads have been joined
[2025-12-15 11:16:59] 2025-12-15 16:16:21,298 | INFO     | [job] retrieve thread has finished
[2025-12-15 11:16:59] 2025-12-15 16:16:21,299 | INFO     | [job] queue monitor thread has finished
[2025-12-15 11:16:59] 2025-12-15 16:16:21,299 | INFO     | [job] job monitor thread has finished
[2025-12-15 11:16:59] 2025-12-15 16:16:21,580 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 11:16:59] 2025-12-15 16:16:21,594 | INFO     | [job] validate thread has finished
[2025-12-15 11:16:59] 2025-12-15 16:16:21,605 | INFO     | [payload] validate_post thread has finished
[2025-12-15 11:16:59] 2025-12-15 16:16:21,696 | INFO     | [payload] failed_post thread has finished
[2025-12-15 11:16:59] 2025-12-15 16:16:21,832 | INFO     | [data] control thread has finished
[2025-12-15 11:16:59] 2025-12-15 16:16:22,069 | INFO     | [job] control thread has finished
[2025-12-15 11:16:59] 2025-12-15 16:16:22,135 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 11:16:59] 2025-12-15 16:16:22,179 | INFO     | [data] copytool_in thread has finished
[2025-12-15 11:16:59] 2025-12-15 16:16:22,246 | INFO     | [payload] control thread has finished
[2025-12-15 11:16:59] 2025-12-15 16:16:22,253 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 11:16:59] 2025-12-15 16:16:22,300 | INFO     | [data] copytool_out thread has finished
[2025-12-15 11:16:59] 2025-12-15 16:16:22,751 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 11:16:59] 2025-12-15 16:16:23,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 11:16:59] 2025-12-15 16:16:27,469 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 11:16:59] 2025-12-15 16:16:50,574 | INFO     | PID=27779 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-15 11:16:59] 2025-12-15 16:16:50,574 | INFO     | .. there are 3 such processes running
[2025-12-15 11:16:59] 2025-12-15 16:16:50,575 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 11:16:59] 2025-12-15 16:16:50,575 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 11:16:59] 2025-12-15 16:16:50,575 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 11:16:59] 2025-12-15 16:16:51,995 | INFO     | [monitor] cgroup control has ended
[2025-12-15 11:16:59] 2025-12-15 16:16:53,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140365577566016)>', '<ExcThread(monitor, started 140365126412032)>']
[2025-12-15 11:16:59] 2025-12-15 16:16:54,588 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 11:16:59] 2025-12-15 16:16:54,588 | INFO     | [monitor] control thread has ended
[2025-12-15 11:16:59] 2025-12-15 16:16:58,716 | INFO     | all workflow threads have been joined
[2025-12-15 11:16:59] 2025-12-15 16:16:58,716 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 11:16:59] 2025-12-15 16:16:58,716 | INFO     | traces error code: 0
[2025-12-15 11:16:59] 2025-12-15 16:16:58,716 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 11:16:59] 2025-12-15 16:16:58,827 [wrapper] ==== pilot stdout END ====
[2025-12-15 11:16:59] 2025-12-15 16:16:58,830 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 11:16:59] 2025-12-15 16:16:58,833 [wrapper] pilotpid: 27779
[2025-12-15 11:16:59] 2025-12-15 16:16:58,835 [wrapper] Pilot exit status: 0
[2025-12-15 11:16:59] 2025-12-15 16:16:58,842 [wrapper] pandaids: 6929482464
[2025-12-15 11:16:59] 2025-12-15 16:16:58,868 [wrapper] cleanup supervisor_pilot 32440 27780
[2025-12-15 11:16:59] 2025-12-15 16:16:58,871 [wrapper] Test setup, not cleaning
[2025-12-15 11:16:59] 2025-12-15 16:16:58,873 [wrapper] apfmon messages muted
[2025-12-15 11:16:59] 2025-12-15 16:16:58,874 [wrapper] ==== wrapper stdout END ====
[2025-12-15 11:16:59] 2025-12-15 16:16:58,876 [wrapper] ==== wrapper stderr END ====
[2025-12-15 11:16:59]  *** Error codes and diagnostics ***
[2025-12-15 11:16:59]     "exeErrorCode": 0,
[2025-12-15 11:16:59]     "exeErrorDiag": "",
[2025-12-15 11:16:59]     "pilotErrorCode": 0,
[2025-12-15 11:16:59]     "pilotErrorDiag": "",
[2025-12-15 11:16:59]  *** Listing of results directory ***
[2025-12-15 11:16:59] total 417736
[2025-12-15 11:16:59] -rw-r--r-- 1 boincer umatlas      5112 Dec 14 15:38 queuedata.json
[2025-12-15 11:16:59] -rw-r--r-- 1 boincer umatlas    579449 Dec 14 15:38 pilot3.tar.gz
[2025-12-15 11:16:59] -rwx------ 1 boincer umatlas     36322 Dec 14 15:38 runpilot2-wrapper.sh
[2025-12-15 11:16:59] -rw-r--r-- 1 boincer umatlas       100 Dec 15 06:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 11:16:59] -rwxr-xr-x 1 boincer umatlas      7986 Dec 15 06:49 run_atlas
[2025-12-15 11:16:59] -rw-r--r-- 1 boincer umatlas       105 Dec 15 06:49 job.xml
[2025-12-15 11:16:59] -rw-r--r-- 2 boincer umatlas 215717379 Dec 15 06:49 EVNT.47898779._000153.pool.root.1
[2025-12-15 11:16:59] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 06:49 start_atlas.sh
[2025-12-15 11:16:59] drwxrwx--x 2 boincer umatlas      4096 Dec 15 06:49 shared
[2025-12-15 11:16:59] -rw-r--r-- 2 boincer umatlas    592396 Dec 15 06:49 input.tar.gz
[2025-12-15 11:16:59] -rw-r--r-- 1 boincer umatlas         0 Dec 15 06:49 boinc_lockfile
[2025-12-15 11:16:59] -rw-r--r-- 1 boincer umatlas      2522 Dec 15 06:49 pandaJob.out
[2025-12-15 11:16:59] -rw------- 1 boincer umatlas        57 Dec 15 06:49 setup.sh.local
[2025-12-15 11:16:59] -rw------- 1 boincer umatlas    991012 Dec 15 06:49 agis_schedconf.cvmfs.json
[2025-12-15 11:16:59] drwx------ 5 boincer umatlas      4096 Dec 15 06:49 pilot3
[2025-12-15 11:16:59] -rw-r--r-- 1 boincer umatlas      5951 Dec 15 11:09 init_data.xml
[2025-12-15 11:16:59] -rw------- 1 boincer umatlas 202727742 Dec 15 11:15 HITS.47898782._003650.pool.root.1
[2025-12-15 11:16:59] -rw-r--r-- 1 boincer umatlas       531 Dec 15 11:15 boinc_task_state.xml
[2025-12-15 11:16:59] -rw------- 1 boincer umatlas      1052 Dec 15 11:16 memory_monitor_summary.json
[2025-12-15 11:16:59] -rw------- 1 boincer umatlas        95 Dec 15 11:16 pilot_heartbeat.json
[2025-12-15 11:16:59] -rw------- 1 boincer umatlas   1516240 Dec 15 11:16 agis_ddmendpoints.agis.ALL.json
[2025-12-15 11:16:59] -rw------- 1 boincer umatlas    480421 Dec 15 11:16 log.47898782._003650.job.log.tgz.1
[2025-12-15 11:16:59] -rw------- 1 boincer umatlas      7855 Dec 15 11:16 heartbeat.json
[2025-12-15 11:16:59] -rw-r--r-- 1 boincer umatlas      8192 Dec 15 11:16 boinc_mmap_file
[2025-12-15 11:16:59] -rw-r--r-- 1 boincer umatlas        29 Dec 15 11:16 wrapper_checkpoint.txt
[2025-12-15 11:16:59] -rw------- 1 boincer umatlas      4821 Dec 15 11:16 pilotlog.txt
[2025-12-15 11:16:59] -rw------- 1 boincer umatlas   2217929 Dec 15 11:16 log.47898782._003650.job.log.1
[2025-12-15 11:16:59] -rw------- 1 boincer umatlas       357 Dec 15 11:16 output.list
[2025-12-15 11:16:59] -rw-r--r-- 1 boincer umatlas       620 Dec 15 11:16 runtime_log
[2025-12-15 11:16:59] -rw------- 1 boincer umatlas   2713600 Dec 15 11:16 result.tar.gz
[2025-12-15 11:16:59] -rw-r--r-- 1 boincer umatlas      9343 Dec 15 11:16 runtime_log.err
[2025-12-15 11:16:59] -rw------- 1 boincer umatlas       663 Dec 15 11:16 LZWLDmg27o8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmA3RKDmVXwR1m.diag
[2025-12-15 11:16:59] -rw-r--r-- 1 boincer umatlas     21491 Dec 15 11:16 stderr.txt
[2025-12-15 11:16:59] HITS file was successfully produced:
[2025-12-15 11:16:59] -rw------- 1 boincer umatlas 202727742 Dec 15 11:15 shared/HITS.pool.root.1
[2025-12-15 11:16:59]  *** Contents of shared directory: ***
[2025-12-15 11:16:59] total 411900
[2025-12-15 11:16:59] -rw-r--r-- 2 boincer umatlas 215717379 Dec 15 06:49 ATLAS.root_0
[2025-12-15 11:16:59] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 06:49 start_atlas.sh
[2025-12-15 11:16:59] -rw-r--r-- 2 boincer umatlas    592396 Dec 15 06:49 input.tar.gz
[2025-12-15 11:16:59] -rw------- 1 boincer umatlas 202727742 Dec 15 11:15 HITS.pool.root.1
[2025-12-15 11:16:59] -rw------- 1 boincer umatlas   2713600 Dec 15 11:16 result.tar.gz
11:17:00 (23779): run_atlas exited; CPU time 120988.334273
11:17:00 (23779): called boinc_finish(0)

</stderr_txt>
]]>

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