Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:21:00 (707065): wrapper (7.7.26015): starting
22:21:00 (707065): wrapper: running run_atlas (--nthreads 4)
[2025-12-15 22:21:00] Arguments: --nthreads 4
[2025-12-15 22:21:00] Threads: 4
[2025-12-15 22:21:00] Checking for CVMFS
[2025-12-15 22:21:00] No cvmfs_config command found, will try listing directly
[2025-12-15 22:21:00] CVMFS is ok
[2025-12-15 22:21:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 22:21:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 22:21:00] Further information can be found at the LHC@home message board.
[2025-12-15 22:21:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 22:21:00] Checking for apptainer binary...
[2025-12-15 22:21:00] which: no apptainer in ((null))
[2025-12-15 22:21:00] apptainer is not installed, using version from CVMFS
[2025-12-15 22:21:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 22:21:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-12-15 22:21:00] apptainer works
[2025-12-15 22:21:01] Set ATHENA_PROC_NUMBER=4
[2025-12-15 22:21:01] Set ATHENA_CORE_NUMBER=4
[2025-12-15 22:21:01] Starting ATLAS job with PandaID=6931151642
[2025-12-15 22:21:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 00:58:39]  *** The last 200 lines of the pilot log: ***
[2025-12-16 00:58:39] 2025-12-15 23:57:56,714 | INFO     | using path: /scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6931151642/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 00:58:39] 2025-12-15 23:57:56,715 | INFO     | extracted standard info from prmon json
[2025-12-16 00:58:39] 2025-12-15 23:57:56,715 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 00:58:39] 2025-12-15 23:57:56,715 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 00:58:39] 2025-12-15 23:57:56,715 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 00:58:39] 2025-12-15 23:57:56,716 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 00:58:39] 2025-12-15 23:57:56,719 | INFO     | fitting pss+swap vs Time
[2025-12-16 00:58:39] 2025-12-15 23:57:56,719 | INFO     | sum of square deviations: 1132458442.5
[2025-12-16 00:58:39] 2025-12-15 23:57:56,720 | INFO     | sum of deviations: -26920037703.499996
[2025-12-16 00:58:39] 2025-12-15 23:57:56,720 | INFO     | mean x: 1765838376.5
[2025-12-16 00:58:39] 2025-12-15 23:57:56,720 | INFO     | mean y: 2384986.448051948
[2025-12-16 00:58:39] 2025-12-15 23:57:56,721 | INFO     | intersect: 41978702959.51771
[2025-12-16 00:58:39] 2025-12-15 23:57:56,721 | INFO     | chi2: 2.066495710254033
[2025-12-16 00:58:39] 2025-12-15 23:57:56,721 | INFO     | sum of square deviations: 1025693650.0
[2025-12-16 00:58:39] 2025-12-15 23:57:56,722 | INFO     | sum of deviations: -17059391577.000002
[2025-12-16 00:58:39] 2025-12-15 23:57:56,723 | INFO     | mean x: 1765838224.0
[2025-12-16 00:58:39] 2025-12-15 23:57:56,723 | INFO     | mean y: 2398739.053691275
[2025-12-16 00:58:39] 2025-12-15 23:57:56,723 | INFO     | intersect: 29371914407.64562
[2025-12-16 00:58:39] 2025-12-15 23:57:56,723 | INFO     | chi2: 1.4075187202032513
[2025-12-16 00:58:39] 2025-12-15 23:57:56,723 | INFO     | current chi2=1.4075187202032513 (change=31.88862124324343 %)
[2025-12-16 00:58:39] 2025-12-15 23:57:56,724 | INFO     | sum of square deviations: 925859220.0
[2025-12-16 00:58:39] 2025-12-15 23:57:56,724 | INFO     | sum of deviations: -16154001638.999998
[2025-12-16 00:58:39] 2025-12-15 23:57:56,724 | INFO     | mean x: 1765838071.5
[2025-12-16 00:58:39] 2025-12-15 23:57:56,725 | INFO     | mean y: 2400122.6666666665
[2025-12-16 00:58:39] 2025-12-15 23:57:56,725 | INFO     | intersect: 30811998909.423466
[2025-12-16 00:58:39] 2025-12-15 23:57:56,725 | INFO     | chi2: 1.4038355708304358
[2025-12-16 00:58:39] 2025-12-15 23:57:56,725 | INFO     | current chi2=1.4038355708304358 (change=0.261676759246491 %)
[2025-12-16 00:58:39] 2025-12-15 23:57:56,725 | INFO     | right removable region: 143
[2025-12-16 00:58:39] 2025-12-15 23:57:56,725 | INFO     | sum of square deviations: 1025693650.0
[2025-12-16 00:58:39] 2025-12-15 23:57:56,726 | INFO     | sum of deviations: -44075878607.00001
[2025-12-16 00:58:39] 2025-12-15 23:57:56,726 | INFO     | mean x: 1765838529.0
[2025-12-16 00:58:39] 2025-12-15 23:57:56,726 | INFO     | mean y: 2408989.4563758387
[2025-12-16 00:58:39] 2025-12-15 23:57:56,727 | INFO     | intersect: 75883628146.62622
[2025-12-16 00:58:39] 2025-12-15 23:57:56,727 | INFO     | chi2: 0.8117035938735209
[2025-12-16 00:58:39] 2025-12-15 23:57:56,727 | INFO     | current chi2=0.8117035938735209 (change=60.72077044022808 %)
[2025-12-16 00:58:39] 2025-12-15 23:57:56,727 | INFO     | sum of square deviations: 925859220.0
[2025-12-16 00:58:39] 2025-12-15 23:57:56,728 | INFO     | sum of deviations: -39696783065.50001
[2025-12-16 00:58:39] 2025-12-15 23:57:56,728 | INFO     | mean x: 1765838681.5
[2025-12-16 00:58:39] 2025-12-15 23:57:56,728 | INFO     | mean y: 2402289.3680555555
[2025-12-16 00:58:39] 2025-12-15 23:57:56,728 | INFO     | intersect: 75713820995.30702
[2025-12-16 00:58:39] 2025-12-15 23:57:56,729 | INFO     | chi2: 0.8112972372212783
[2025-12-16 00:58:39] 2025-12-15 23:57:56,729 | INFO     | current chi2=0.8112972372212783 (change=0.050062197002647815 %)
[2025-12-16 00:58:39] 2025-12-15 23:57:56,729 | INFO     | left removable region: 20
[2025-12-16 00:58:39] 2025-12-15 23:57:56,729 | INFO     | sum of square deviations: 576985702.0
[2025-12-16 00:58:39] 2025-12-15 23:57:56,730 | INFO     | sum of deviations: -20269435996.0
[2025-12-16 00:58:39] 2025-12-15 23:57:56,730 | INFO     | mean x: 1765838651.0
[2025-12-16 00:58:39] 2025-12-15 23:57:56,730 | INFO     | mean y: 2403658.62601626
[2025-12-16 00:58:39] 2025-12-15 23:57:56,730 | INFO     | intersect: 62036095986.94559
[2025-12-16 00:58:39] 2025-12-15 23:57:56,730 | INFO     | chi2: 0.10863012465133025
[2025-12-16 00:58:39] 2025-12-15 23:57:56,730 | INFO     | current memory leak: -35.13 B/s (using 123 data points, chi2=0.11)
[2025-12-16 00:58:39] 2025-12-15 23:57:56,731 | INFO     | could have reported an average CPU frequency of 2679 MHz (9 samples)
[2025-12-16 00:58:39] 2025-12-15 23:57:56,731 | INFO     | ..............................
[2025-12-16 00:58:39] 2025-12-15 23:57:56,731 | INFO     | . Timing measurements:
[2025-12-16 00:58:39] 2025-12-15 23:57:56,731 | INFO     | . get job = 0 s
[2025-12-16 00:58:39] 2025-12-15 23:57:56,731 | INFO     | . initial setup = 1 s
[2025-12-16 00:58:39] 2025-12-15 23:57:56,732 | INFO     | . payload setup = 9 s
[2025-12-16 00:58:39] 2025-12-15 23:57:56,732 | INFO     | . stage-in = 0 s
[2025-12-16 00:58:39] 2025-12-15 23:57:56,732 | INFO     | . payload execution = 9360 s
[2025-12-16 00:58:39] 2025-12-15 23:57:56,732 | INFO     | . stage-out = 0 s
[2025-12-16 00:58:39] 2025-12-15 23:57:56,732 | INFO     | . log creation = 0 s
[2025-12-16 00:58:39] 2025-12-15 23:57:56,732 | INFO     | ..............................
[2025-12-16 00:58:39] 2025-12-15 23:57:56,837 | INFO     | 
[2025-12-16 00:58:39] 2025-12-15 23:57:56,837 | INFO     | job summary report
[2025-12-16 00:58:39] 2025-12-15 23:57:56,838 | INFO     | --------------------------------------------------
[2025-12-16 00:58:39] 2025-12-15 23:57:56,838 | INFO     | PanDA job id: 6931151642
[2025-12-16 00:58:39] 2025-12-15 23:57:56,838 | INFO     | task id: 47898896
[2025-12-16 00:58:39] 2025-12-15 23:57:56,838 | INFO     | errors: (none)
[2025-12-16 00:58:39] 2025-12-15 23:57:56,838 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 00:58:39] 2025-12-15 23:57:56,838 | INFO     | pilot state: finished 
[2025-12-16 00:58:39] 2025-12-15 23:57:56,838 | INFO     | transexitcode: 0
[2025-12-16 00:58:39] 2025-12-15 23:57:56,838 | INFO     | exeerrorcode: 0
[2025-12-16 00:58:39] 2025-12-15 23:57:56,838 | INFO     | exeerrordiag: 
[2025-12-16 00:58:39] 2025-12-15 23:57:56,839 | INFO     | exitcode: 0
[2025-12-16 00:58:39] 2025-12-15 23:57:56,839 | INFO     | exitmsg: OK
[2025-12-16 00:58:39] 2025-12-15 23:57:56,839 | INFO     | cpuconsumptiontime: 35859 s
[2025-12-16 00:58:39] 2025-12-15 23:57:56,839 | INFO     | nevents: 400
[2025-12-16 00:58:39] 2025-12-15 23:57:56,839 | INFO     | neventsw: 0
[2025-12-16 00:58:39] 2025-12-15 23:57:56,839 | INFO     | pid: 718606
[2025-12-16 00:58:39] 2025-12-15 23:57:56,839 | INFO     | pgrp: 718606
[2025-12-16 00:58:39] 2025-12-15 23:57:56,839 | INFO     | corecount: 4
[2025-12-16 00:58:39] 2025-12-15 23:57:56,840 | INFO     | event service: False
[2025-12-16 00:58:39] 2025-12-15 23:57:56,840 | INFO     | sizes: {0: 2283961, 7: 2284223, 11: 2284251, 9372: 2312903, 9373: 2321925, 9374: 2321981, 9383: 2322395}
[2025-12-16 00:58:39] 2025-12-15 23:57:56,840 | INFO     | --------------------------------------------------
[2025-12-16 00:58:39] 2025-12-15 23:57:56,840 | INFO     | 
[2025-12-16 00:58:39] 2025-12-15 23:57:56,840 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2025-12-16 00:58:39] 2025-12-15 23:57:56,870 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 00:58:39] 2025-12-15 23:57:56,870 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 00:58:39] 2025-12-15 23:57:56,870 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 00:58:39] 2025-12-15 23:57:56,870 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 00:58:39] 2025-12-15 23:57:56,870 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 00:58:39] 2025-12-15 23:57:56,870 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 00:58:39] 2025-12-15 23:57:56,870 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 00:58:39] 2025-12-15 23:57:56,871 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 00:58:39] 2025-12-15 23:57:56,871 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 00:58:39] 2025-12-15 23:57:56,871 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 00:58:39] 2025-12-15 23:57:56,871 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 00:58:39] 2025-12-15 23:57:56,871 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 00:58:39] 2025-12-15 23:57:56,871 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 00:58:39] 2025-12-15 23:57:56,871 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 00:58:39] 2025-12-15 23:57:56,871 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 00:58:39] 2025-12-15 23:57:56,871 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 00:58:39] 2025-12-15 23:57:56,871 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 00:58:39] 2025-12-15 23:57:56,871 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 00:58:39] 2025-12-15 23:57:56,871 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 00:58:39] 2025-12-15 23:57:56,872 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 00:58:39] 2025-12-15 23:57:56,872 | INFO     | job 6931151642 has completed (purged errors)
[2025-12-16 00:58:39] 2025-12-15 23:57:56,872 | INFO     | overall cleanup function is called
[2025-12-16 00:58:39] 2025-12-15 23:57:57,646 | INFO     | number of running child processes to parent process 718606: 1
[2025-12-16 00:58:39] 2025-12-15 23:57:57,646 | INFO     | maximum number of monitored processes: 6
[2025-12-16 00:58:39] 2025-12-15 23:57:57,646 | INFO     | aborting job monitoring since job object (job id=6931151642) has expired
[2025-12-16 00:58:39] 2025-12-15 23:57:57,883 | INFO     | --- collectZombieJob: --- 10, [718606]
[2025-12-16 00:58:39] 2025-12-15 23:57:57,883 | INFO     | zombie collector waiting for pid 718606
[2025-12-16 00:58:39] 2025-12-15 23:57:57,884 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 00:58:39] 2025-12-15 23:57:57,884 | INFO     | collected zombie processes
[2025-12-16 00:58:39] 2025-12-15 23:57:57,884 | INFO     | will attempt to kill all subprocesses of pid=718606
[2025-12-16 00:58:39] 2025-12-15 23:57:58,653 | INFO     | process IDs to be killed: [718606] (in reverse order)
[2025-12-16 00:58:39] 2025-12-15 23:57:58,895 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 00:58:39] 2025-12-15 23:57:58,896 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 00:58:39] 2025-12-15 23:57:58,924 | INFO     | did not find any defunct processes belonging to 718606
[2025-12-16 00:58:39] 2025-12-15 23:57:58,954 | INFO     | did not find any defunct processes belonging to 718606
[2025-12-16 00:58:39] 2025-12-15 23:57:58,954 | INFO     | ready for new job
[2025-12-16 00:58:39] 2025-12-15 23:57:58,954 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 00:58:39] 2025-12-15 23:57:58,956 | INFO     | ***************************************
[2025-12-16 00:58:39] 2025-12-15 23:57:58,957 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 00:58:39] 2025-12-15 23:57:58,957 | INFO     | ***************************************
[2025-12-16 00:58:39] 2025-12-15 23:57:58,957 | INFO     | 
[2025-12-16 00:58:39] 2025-12-15 23:57:58,964 | INFO     | architecture information:
[2025-12-16 00:58:39] 2025-12-15 23:57:58,964 | INFO     | executing command: cat /etc/os-release
[2025-12-16 00:58:39] 2025-12-15 23:57:58,983 | INFO     | cat /etc/os-release:
[2025-12-16 00:58:39] NAME="CentOS Linux"
[2025-12-16 00:58:39] VERSION="7 (Core)"
[2025-12-16 00:58:39] ID="centos"
[2025-12-16 00:58:39] ID_LIKE="rhel fedora"
[2025-12-16 00:58:39] VERSION_ID="7"
[2025-12-16 00:58:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 00:58:39] ANSI_COLOR="0;31"
[2025-12-16 00:58:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 00:58:39] HOME_URL="https://www.centos.org/"
[2025-12-16 00:58:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 00:58:39] 
[2025-12-16 00:58:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 00:58:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 00:58:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 00:58:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 00:58:39] 
[2025-12-16 00:58:39] 2025-12-15 23:57:58,984 | INFO     | ***************************************
[2025-12-16 00:58:39] 2025-12-15 23:57:59,486 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2025-12-16 00:58:39] 2025-12-15 23:57:59,510 | INFO     | sufficient remaining disk space (3283336822784 B)
[2025-12-16 00:58:39] 2025-12-15 23:57:59,510 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 00:58:39] 2025-12-15 23:57:59,511 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 00:58:39] 2025-12-15 23:57:59,511 | INFO     | update_server=False
[2025-12-16 00:58:39] 2025-12-15 23:57:59,511 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 00:58:39] 2025-12-15 23:57:59,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 00:58:39] 2025-12-15 23:57:59,512 | INFO     | aborting loop
[2025-12-16 00:58:39] 2025-12-15 23:57:59,549 | INFO     | all payload control threads have been joined
[2025-12-16 00:58:39] 2025-12-15 23:57:59,878 | INFO     | all job control threads have been joined
[2025-12-16 00:58:39] 2025-12-15 23:58:00,152 | INFO     | all data control threads have been joined
[2025-12-16 00:58:39] 2025-12-15 23:58:00,249 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 00:58:39] 2025-12-15 23:58:00,516 | INFO     | [job] retrieve thread has finished
[2025-12-16 00:58:39] 2025-12-15 23:58:00,517 | INFO     | [job] job monitor thread has finished
[2025-12-16 00:58:39] 2025-12-15 23:58:00,518 | INFO     | [payload] failed_post thread has finished
[2025-12-16 00:58:39] 2025-12-15 23:58:00,526 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 00:58:39] 2025-12-15 23:58:00,554 | INFO     | [payload] control thread has finished
[2025-12-16 00:58:39] 2025-12-15 23:58:00,774 | INFO     | [job] validate thread has finished
[2025-12-16 00:58:39] 2025-12-15 23:58:00,883 | INFO     | [job] control thread has finished
[2025-12-16 00:58:39] 2025-12-15 23:58:01,042 | INFO     | [data] copytool_in thread has finished
[2025-12-16 00:58:39] 2025-12-15 23:58:01,158 | INFO     | [data] control thread has finished
[2025-12-16 00:58:39] 2025-12-15 23:58:01,278 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 00:58:39] 2025-12-15 23:58:01,364 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 00:58:39] 2025-12-15 23:58:01,599 | INFO     | [payload] validate_post thread has finished
[2025-12-16 00:58:39] 2025-12-15 23:58:01,847 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 00:58:39] 2025-12-15 23:58:02,254 | INFO     | [data] copytool_out thread has finished
[2025-12-16 00:58:39] 2025-12-15 23:58:02,340 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 00:58:39] 2025-12-15 23:58:02,852 | INFO     | [job] queue monitor thread has finished
[2025-12-16 00:58:39] 2025-12-15 23:58:06,346 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 00:58:39] 2025-12-15 23:58:10,313 | INFO     | job.realtimelogging is not enabled
[2025-12-16 00:58:39] 2025-12-15 23:58:11,319 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 00:58:39] 2025-12-15 23:58:29,850 | INFO     | PID=711104 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 00:58:39] 2025-12-15 23:58:29,850 | INFO     | .. there are 7 such processes running
[2025-12-16 00:58:39] 2025-12-15 23:58:29,851 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 00:58:39] 2025-12-15 23:58:29,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 00:58:39] 2025-12-15 23:58:29,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 00:58:39] 2025-12-15 23:58:30,260 | INFO     | [monitor] cgroup control has ended
[2025-12-16 00:58:39] 2025-12-15 23:58:31,169 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22382319429440)>', '<ExcThread(monitor, started 22381745665792)>']
[2025-12-16 00:58:39] 2025-12-15 23:58:31,862 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 00:58:39] 2025-12-15 23:58:31,862 | INFO     | [monitor] control thread has ended
[2025-12-16 00:58:39] 2025-12-15 23:58:36,194 | INFO     | all workflow threads have been joined
[2025-12-16 00:58:39] 2025-12-15 23:58:36,194 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 00:58:39] 2025-12-15 23:58:36,194 | INFO     | traces error code: 0
[2025-12-16 00:58:39] 2025-12-15 23:58:36,195 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 00:58:39] 2025-12-15 23:58:36,370 [wrapper] ==== pilot stdout END ====
[2025-12-16 00:58:39] 2025-12-15 23:58:36,374 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 00:58:39] 2025-12-15 23:58:36,376 [wrapper] pilotpid: 711104
[2025-12-16 00:58:39] 2025-12-15 23:58:36,379 [wrapper] Pilot exit status: 0
[2025-12-16 00:58:39] 2025-12-15 23:58:36,391 [wrapper] pandaids: 6931151642
[2025-12-16 00:58:39] 2025-12-15 23:58:36,563 [wrapper] cleanup supervisor_pilot  929633 711105
[2025-12-16 00:58:39] 2025-12-15 23:58:36,568 [wrapper] Test setup, not cleaning
[2025-12-16 00:58:39] 2025-12-15 23:58:36,572 [wrapper] apfmon messages muted
[2025-12-16 00:58:39] 2025-12-15 23:58:36,576 [wrapper] ==== wrapper stdout END ====
[2025-12-16 00:58:39] 2025-12-15 23:58:36,580 [wrapper] ==== wrapper stderr END ====
[2025-12-16 00:58:39]  *** Error codes and diagnostics ***
[2025-12-16 00:58:39]     "exeErrorCode": 0,
[2025-12-16 00:58:39]     "exeErrorDiag": "",
[2025-12-16 00:58:39]     "pilotErrorCode": 0,
[2025-12-16 00:58:39]     "pilotErrorDiag": "",
[2025-12-16 00:58:39]  *** Listing of results directory ***
[2025-12-16 00:58:39] total 379640
[2025-12-16 00:58:39] -rw-r--r-- 1 boinc boinc    579449 Dec 15 02:16 pilot3.tar.gz
[2025-12-16 00:58:39] -rwx------ 1 boinc boinc     36322 Dec 15 02:19 runpilot2-wrapper.sh
[2025-12-16 00:58:39] -rw-r--r-- 1 boinc boinc      5112 Dec 15 02:22 queuedata.json
[2025-12-16 00:58:39] -rw-r--r-- 1 boinc boinc       100 Dec 15 22:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 00:58:39] -rwxr-xr-x 1 boinc boinc      7986 Dec 15 22:20 run_atlas
[2025-12-16 00:58:39] -rw-r--r-- 1 boinc boinc       105 Dec 15 22:20 job.xml
[2025-12-16 00:58:39] -rw-r--r-- 1 boinc boinc      6691 Dec 15 22:21 init_data.xml
[2025-12-16 00:58:39] -rw-r--r-- 2 boinc boinc 201072224 Dec 15 22:21 EVNT.47898894._000062.pool.root.1
[2025-12-16 00:58:39] -rw-r--r-- 2 boinc boinc     15847 Dec 15 22:21 start_atlas.sh
[2025-12-16 00:58:39] drwxrwx--x 2 boinc boinc      4096 Dec 15 22:21 shared
[2025-12-16 00:58:39] -rw-r--r-- 2 boinc boinc    592400 Dec 15 22:21 input.tar.gz
[2025-12-16 00:58:39] -rw-r--r-- 1 boinc boinc         0 Dec 15 22:21 boinc_lockfile
[2025-12-16 00:58:39] -rw-r--r-- 1 boinc boinc      2506 Dec 15 22:21 pandaJob.out
[2025-12-16 00:58:39] -rw------- 1 boinc boinc    994539 Dec 15 22:21 agis_schedconf.cvmfs.json
[2025-12-16 00:58:39] -rw------- 1 boinc boinc   1516240 Dec 15 22:21 agis_ddmendpoints.agis.ALL.json
[2025-12-16 00:58:39] drwx------ 5 boinc boinc      4096 Dec 15 22:21 pilot3
[2025-12-16 00:58:39] -rw------- 1 boinc boinc 180457502 Dec 16 00:57 HITS.47898896._001544.pool.root.1
[2025-12-16 00:58:39] -rw-r--r-- 1 boinc boinc       528 Dec 16 00:57 boinc_task_state.xml
[2025-12-16 00:58:39] -rw------- 1 boinc boinc      1035 Dec 16 00:57 memory_monitor_summary.json
[2025-12-16 00:58:39] -rw------- 1 boinc boinc    335791 Dec 16 00:57 log.47898896._001544.job.log.tgz.1
[2025-12-16 00:58:39] -rw------- 1 boinc boinc      7789 Dec 16 00:57 heartbeat.json
[2025-12-16 00:58:39] -rw------- 1 boinc boinc        95 Dec 16 00:58 pilot_heartbeat.json
[2025-12-16 00:58:39] -rw-r--r-- 1 boinc boinc        26 Dec 16 00:58 wrapper_checkpoint.txt
[2025-12-16 00:58:39] -rw------- 1 boinc boinc      4906 Dec 16 00:58 pilotlog.txt
[2025-12-16 00:58:39] -rw------- 1 boinc boinc   1316422 Dec 16 00:58 log.47898896._001544.job.log.1
[2025-12-16 00:58:39] -rw------- 1 boinc boinc       357 Dec 16 00:58 output.list
[2025-12-16 00:58:39] -rw-r--r-- 1 boinc boinc       620 Dec 16 00:58 runtime_log
[2025-12-16 00:58:39] -rw------- 1 boinc boinc   1669120 Dec 16 00:58 result.tar.gz
[2025-12-16 00:58:39] -rw-r--r-- 1 boinc boinc      9222 Dec 16 00:58 runtime_log.err
[2025-12-16 00:58:39] -rw------- 1 boinc boinc       662 Dec 16 00:58 lGUKDmvQCp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCaSKDmr3cKzn.diag
[2025-12-16 00:58:39] -rw-r--r-- 1 boinc boinc      8192 Dec 16 00:58 boinc_mmap_file
[2025-12-16 00:58:39] -rw-r--r-- 1 boinc boinc     20842 Dec 16 00:58 stderr.txt
[2025-12-16 00:58:39] HITS file was successfully produced:
[2025-12-16 00:58:39] -rw------- 1 boinc boinc 180457502 Dec 16 00:57 shared/HITS.pool.root.1
[2025-12-16 00:58:39]  *** Contents of shared directory: ***
[2025-12-16 00:58:39] total 374828
[2025-12-16 00:58:39] -rw-r--r-- 2 boinc boinc 201072224 Dec 15 22:21 ATLAS.root_0
[2025-12-16 00:58:39] -rw-r--r-- 2 boinc boinc     15847 Dec 15 22:21 start_atlas.sh
[2025-12-16 00:58:39] -rw-r--r-- 2 boinc boinc    592400 Dec 15 22:21 input.tar.gz
[2025-12-16 00:58:39] -rw------- 1 boinc boinc 180457502 Dec 16 00:57 HITS.pool.root.1
[2025-12-16 00:58:39] -rw------- 1 boinc boinc   1669120 Dec 16 00:58 result.tar.gz
00:58:40 (707065): run_atlas exited; CPU time 36481.387451
00:58:40 (707065): called boinc_finish(0)

</stderr_txt>
]]>

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