Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:04:44 (3169749): wrapper (7.7.26015): starting
07:04:44 (3169749): wrapper: running run_atlas (--nthreads 9)
[2025-12-15 07:04:44] Arguments: --nthreads 9
[2025-12-15 07:04:44] Threads: 9
[2025-12-15 07:04:44] Checking for CVMFS
[2025-12-15 07:04:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 07:04:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 07:04:44] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 07:04:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 07:04:45] 2.13.2.0 7154 61060 173752 154031 1 382 37316865 40960000 10347 16776704 0 57129599 99.705 49387696 37197 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-15 07:04:45] CVMFS is ok
[2025-12-15 07:04:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 07:04:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 07:04:45] Further information can be found at the LHC@home message board.
[2025-12-15 07:04:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 07:04:45] Checking for apptainer binary...
[2025-12-15 07:04:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 07:04:45] Running /usr/bin/apptainer --version
[2025-12-15 07:04:45] apptainer version 1.4.4-1.el9
[2025-12-15 07:04:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 07:04:45] c-211-7.aglt2.org
[2025-12-15 07:04:45] apptainer works
[2025-12-15 07:04:45] Set ATHENA_PROC_NUMBER=9
[2025-12-15 07:04:45] Set ATHENA_CORE_NUMBER=9
[2025-12-15 07:04:45] Starting ATLAS job with PandaID=6931153401
[2025-12-15 07:04:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 13:06:13]  *** The last 200 lines of the pilot log: ***
[2025-12-15 13:06:13] 2025-12-15 18:05:35,827 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-15 13:06:13] 2025-12-15 18:05:36,856 | INFO     | monitor loop #1326: job 0:6931153401 is in state 'finished'
[2025-12-15 13:06:13] 2025-12-15 18:05:36,856 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 13:06:13] 2025-12-15 18:05:37,606 | INFO     | time since job start (21620s) is within the limit (174528.0s)
[2025-12-15 13:06:13] 2025-12-15 18:05:39,359 | INFO     | monitor loop #1327: job 0:6931153401 is in state 'finished'
[2025-12-15 13:06:13] 2025-12-15 18:05:39,359 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 13:06:13] 2025-12-15 18:05:39,594 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-15 13:06:13] 2025-12-15 18:05:39,603 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2677.3811250000003
[2025-12-15 13:06:13] 2025-12-15 18:05:39,611 | INFO     | time since job start (21622s) is within the limit (174528.0s)
[2025-12-15 13:06:13] 2025-12-15 18:05:39,612 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6931153401/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 13:06:13] 2025-12-15 18:05:39,613 | INFO     | extracted standard info from prmon json
[2025-12-15 13:06:13] 2025-12-15 18:05:39,613 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 13:06:13] 2025-12-15 18:05:39,613 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 13:06:13] 2025-12-15 18:05:39,614 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 13:06:13] 2025-12-15 18:05:39,614 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 13:06:13] 2025-12-15 18:05:39,620 | INFO     | fitting pss+swap vs Time
[2025-12-15 13:06:13] 2025-12-15 18:05:39,620 | INFO     | sum of square deviations: 13756184887.457638
[2025-12-15 13:06:13] 2025-12-15 18:05:39,623 | INFO     | sum of deviations: -28033348361.627106
[2025-12-15 13:06:13] 2025-12-15 18:05:39,623 | INFO     | mean x: 1765811145.0847456
[2025-12-15 13:06:13] 2025-12-15 18:05:39,623 | INFO     | mean y: 2576668.9209039547
[2025-12-15 13:06:13] 2025-12-15 18:05:39,623 | INFO     | intersect: 3601074317.504997
[2025-12-15 13:06:13] 2025-12-15 18:05:39,624 | INFO     | chi2: 2.8532527463874926
[2025-12-15 13:06:13] 2025-12-15 18:05:39,625 | INFO     | sum of square deviations: 13181546006.40681
[2025-12-15 13:06:13] 2025-12-15 18:05:39,628 | INFO     | sum of deviations: -4583988571.060139
[2025-12-15 13:06:13] 2025-12-15 18:05:39,628 | INFO     | mean x: 1765810992.590258
[2025-12-15 13:06:13] 2025-12-15 18:05:39,628 | INFO     | mean y: 2582822.335243553
[2025-12-15 13:06:13] 2025-12-15 18:05:39,628 | INFO     | intersect: 616657787.8022563
[2025-12-15 13:06:13] 2025-12-15 18:05:39,628 | INFO     | chi2: 2.1654437735859355
[2025-12-15 13:06:13] 2025-12-15 18:05:39,629 | INFO     | current chi2=2.1654437735859355 (change=24.106135485977994 %)
[2025-12-15 13:06:13] 2025-12-15 18:05:39,629 | INFO     | right removable region: 348
[2025-12-15 13:06:13] 2025-12-15 18:05:39,629 | INFO     | sum of square deviations: 13181441208.223442
[2025-12-15 13:06:13] 2025-12-15 18:05:39,632 | INFO     | sum of deviations: -96274821645.97137
[2025-12-15 13:06:13] 2025-12-15 18:05:39,632 | INFO     | mean x: 1765811297.5931232
[2025-12-15 13:06:13] 2025-12-15 18:05:39,632 | INFO     | mean y: 2594686.8452722062
[2025-12-15 13:06:13] 2025-12-15 18:05:39,632 | INFO     | intersect: 12899755554.972511
[2025-12-15 13:06:13] 2025-12-15 18:05:39,633 | INFO     | chi2: 1.0744213238053506
[2025-12-15 13:06:13] 2025-12-15 18:05:39,633 | INFO     | current chi2=1.0744213238053506 (change=62.34398354069134 %)
[2025-12-15 13:06:13] 2025-12-15 18:05:39,633 | INFO     | sum of square deviations: 12622951436.639515
[2025-12-15 13:06:13] 2025-12-15 18:05:39,636 | INFO     | sum of deviations: -92994282071.3779
[2025-12-15 13:06:13] 2025-12-15 18:05:39,636 | INFO     | mean x: 1765811450.0988371
[2025-12-15 13:06:13] 2025-12-15 18:05:39,636 | INFO     | mean y: 2593768.305232558
[2025-12-15 13:06:13] 2025-12-15 18:05:39,636 | INFO     | intersect: 13011466447.536282
[2025-12-15 13:06:13] 2025-12-15 18:05:39,637 | INFO     | chi2: 1.0459750111295822
[2025-12-15 13:06:13] 2025-12-15 18:05:39,637 | INFO     | current chi2=1.0459750111295822 (change=2.647593829859792 %)
[2025-12-15 13:06:13] 2025-12-15 18:05:39,637 | INFO     | left removable region: 20
[2025-12-15 13:06:13] 2025-12-15 18:05:39,637 | INFO     | sum of square deviations: 10942224225.875
[2025-12-15 13:06:13] 2025-12-15 18:05:39,639 | INFO     | sum of deviations: -34843222722.87501
[2025-12-15 13:06:13] 2025-12-15 18:05:39,639 | INFO     | mean x: 1765811572.125
[2025-12-15 13:06:13] 2025-12-15 18:05:39,639 | INFO     | mean y: 2590288.948170732
[2025-12-15 13:06:13] 2025-12-15 18:05:39,639 | INFO     | intersect: 5625447637.154398
[2025-12-15 13:06:13] 2025-12-15 18:05:39,639 | INFO     | chi2: 0.22668960310451494
[2025-12-15 13:06:13] 2025-12-15 18:05:39,639 | INFO     | current memory leak: -3.18 B/s (using 328 data points, chi2=0.23)
[2025-12-15 13:06:13] 2025-12-15 18:05:39,640 | INFO     | could have reported an average CPU frequency of 2568 MHz (15 samples)
[2025-12-15 13:06:13] 2025-12-15 18:05:39,640 | INFO     | ..............................
[2025-12-15 13:06:13] 2025-12-15 18:05:39,640 | INFO     | . Timing measurements:
[2025-12-15 13:06:13] 2025-12-15 18:05:39,640 | INFO     | . get job = 0 s
[2025-12-15 13:06:13] 2025-12-15 18:05:39,641 | INFO     | . initial setup = 4 s
[2025-12-15 13:06:13] 2025-12-15 18:05:39,641 | INFO     | . payload setup = 14 s
[2025-12-15 13:06:13] 2025-12-15 18:05:39,641 | INFO     | . stage-in = 0 s
[2025-12-15 13:06:13] 2025-12-15 18:05:39,641 | INFO     | . payload execution = 21563 s
[2025-12-15 13:06:13] 2025-12-15 18:05:39,641 | INFO     | . stage-out = 2 s
[2025-12-15 13:06:13] 2025-12-15 18:05:39,641 | INFO     | . log creation = 0 s
[2025-12-15 13:06:13] 2025-12-15 18:05:39,641 | INFO     | ..............................
[2025-12-15 13:06:13] 2025-12-15 18:05:39,751 | INFO     | 
[2025-12-15 13:06:13] 2025-12-15 18:05:39,751 | INFO     | job summary report
[2025-12-15 13:06:13] 2025-12-15 18:05:39,752 | INFO     | --------------------------------------------------
[2025-12-15 13:06:13] 2025-12-15 18:05:39,752 | INFO     | PanDA job id: 6931153401
[2025-12-15 13:06:13] 2025-12-15 18:05:39,752 | INFO     | task id: 47898878
[2025-12-15 13:06:13] 2025-12-15 18:05:39,752 | INFO     | errors: (none)
[2025-12-15 13:06:13] 2025-12-15 18:05:39,752 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 13:06:13] 2025-12-15 18:05:39,752 | INFO     | pilot state: finished 
[2025-12-15 13:06:13] 2025-12-15 18:05:39,752 | INFO     | transexitcode: 0
[2025-12-15 13:06:13] 2025-12-15 18:05:39,752 | INFO     | exeerrorcode: 0
[2025-12-15 13:06:13] 2025-12-15 18:05:39,752 | INFO     | exeerrordiag: 
[2025-12-15 13:06:13] 2025-12-15 18:05:39,753 | INFO     | exitcode: 0
[2025-12-15 13:06:13] 2025-12-15 18:05:39,753 | INFO     | exitmsg: OK
[2025-12-15 13:06:13] 2025-12-15 18:05:39,753 | INFO     | cpuconsumptiontime: 55228 s
[2025-12-15 13:06:13] 2025-12-15 18:05:39,753 | INFO     | nevents: 400
[2025-12-15 13:06:13] 2025-12-15 18:05:39,753 | INFO     | neventsw: 0
[2025-12-15 13:06:13] 2025-12-15 18:05:39,753 | INFO     | pid: 3180038
[2025-12-15 13:06:13] 2025-12-15 18:05:39,753 | INFO     | pgrp: 3180038
[2025-12-15 13:06:13] 2025-12-15 18:05:39,753 | INFO     | corecount: 9
[2025-12-15 13:06:13] 2025-12-15 18:05:39,753 | INFO     | event service: False
[2025-12-15 13:06:13] 2025-12-15 18:05:39,753 | INFO     | sizes: {0: 2283667, 1: 2283922, 2: 2283922, 13: 2283950, 19: 2284268, 23: 2284296, 21581: 2318321, 21584: 2327375, 21589: 2327513}
[2025-12-15 13:06:13] 2025-12-15 18:05:39,754 | INFO     | --------------------------------------------------
[2025-12-15 13:06:13] 2025-12-15 18:05:39,754 | INFO     | 
[2025-12-15 13:06:13] 2025-12-15 18:05:39,754 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-15 13:06:13] 2025-12-15 18:05:39,778 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 13:06:13] 2025-12-15 18:05:39,778 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 13:06:13] 2025-12-15 18:05:39,779 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 13:06:13] 2025-12-15 18:05:39,779 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 13:06:13] 2025-12-15 18:05:39,779 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 13:06:13] 2025-12-15 18:05:39,779 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 13:06:13] 2025-12-15 18:05:39,779 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 13:06:13] 2025-12-15 18:05:39,779 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 13:06:13] 2025-12-15 18:05:39,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 13:06:13] 2025-12-15 18:05:39,780 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 13:06:13] 2025-12-15 18:05:39,780 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 13:06:13] 2025-12-15 18:05:39,780 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 13:06:13] 2025-12-15 18:05:39,780 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 13:06:13] 2025-12-15 18:05:39,780 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 13:06:13] 2025-12-15 18:05:39,780 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 13:06:13] 2025-12-15 18:05:39,780 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 13:06:13] 2025-12-15 18:05:39,780 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 13:06:13] 2025-12-15 18:05:39,781 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 13:06:13] 2025-12-15 18:05:39,781 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 13:06:13] 2025-12-15 18:05:39,781 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 13:06:13] 2025-12-15 18:05:39,781 | INFO     | job 6931153401 has completed (purged errors)
[2025-12-15 13:06:13] 2025-12-15 18:05:39,781 | INFO     | overall cleanup function is called
[2025-12-15 13:06:13] 2025-12-15 18:05:40,790 | INFO     | --- collectZombieJob: --- 10, [3180038]
[2025-12-15 13:06:13] 2025-12-15 18:05:40,790 | INFO     | zombie collector waiting for pid 3180038
[2025-12-15 13:06:13] 2025-12-15 18:05:40,790 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 13:06:13] 2025-12-15 18:05:40,790 | INFO     | collected zombie processes
[2025-12-15 13:06:13] 2025-12-15 18:05:40,790 | INFO     | will attempt to kill all subprocesses of pid=3180038
[2025-12-15 13:06:13] 2025-12-15 18:05:41,053 | INFO     | process IDs to be killed: [3180038] (in reverse order)
[2025-12-15 13:06:13] 2025-12-15 18:05:41,132 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 13:06:13] 2025-12-15 18:05:41,132 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 13:06:13] 2025-12-15 18:05:41,141 | INFO     | did not find any defunct processes belonging to 3180038
[2025-12-15 13:06:13] 2025-12-15 18:05:41,150 | INFO     | did not find any defunct processes belonging to 3180038
[2025-12-15 13:06:13] 2025-12-15 18:05:41,150 | INFO     | ready for new job
[2025-12-15 13:06:13] 2025-12-15 18:05:41,150 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 13:06:13] 2025-12-15 18:05:41,175 | INFO     | ***************************************
[2025-12-15 13:06:13] 2025-12-15 18:05:41,176 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 13:06:13] 2025-12-15 18:05:41,176 | INFO     | ***************************************
[2025-12-15 13:06:13] 2025-12-15 18:05:41,176 | INFO     | 
[2025-12-15 13:06:13] 2025-12-15 18:05:41,179 | INFO     | architecture information:
[2025-12-15 13:06:13] 2025-12-15 18:05:41,179 | INFO     | executing command: cat /etc/os-release
[2025-12-15 13:06:13] 2025-12-15 18:05:41,189 | INFO     | cat /etc/os-release:
[2025-12-15 13:06:13] NAME="CentOS Linux"
[2025-12-15 13:06:13] VERSION="7 (Core)"
[2025-12-15 13:06:13] ID="centos"
[2025-12-15 13:06:13] ID_LIKE="rhel fedora"
[2025-12-15 13:06:13] VERSION_ID="7"
[2025-12-15 13:06:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 13:06:13] ANSI_COLOR="0;31"
[2025-12-15 13:06:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 13:06:13] HOME_URL="https://www.centos.org/"
[2025-12-15 13:06:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 13:06:13] 
[2025-12-15 13:06:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 13:06:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 13:06:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 13:06:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 13:06:13] 
[2025-12-15 13:06:13] 2025-12-15 18:05:41,190 | INFO     | ***************************************
[2025-12-15 13:06:13] 2025-12-15 18:05:41,692 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-15 13:06:13] 2025-12-15 18:05:41,707 | INFO     | sufficient remaining disk space (63702040576 B)
[2025-12-15 13:06:13] 2025-12-15 18:05:41,707 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 13:06:13] 2025-12-15 18:05:41,707 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 13:06:13] 2025-12-15 18:05:41,707 | INFO     | update_server=False
[2025-12-15 13:06:13] 2025-12-15 18:05:41,707 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 13:06:13] 2025-12-15 18:05:41,708 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 13:06:13] 2025-12-15 18:05:41,712 | INFO     | all data control threads have been joined
[2025-12-15 13:06:13] 2025-12-15 18:05:41,862 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-15 13:06:13] 2025-12-15 18:05:41,862 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-15 13:06:13] 2025-12-15 18:05:41,862 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 13:06:13] 2025-12-15 18:05:41,862 | INFO     | will abort loop
[2025-12-15 13:06:13] 2025-12-15 18:05:42,071 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 13:06:13] 2025-12-15 18:05:42,464 | INFO     | all job control threads have been joined
[2025-12-15 13:06:13] 2025-12-15 18:05:42,712 | INFO     | [job] retrieve thread has finished
[2025-12-15 13:06:13] 2025-12-15 18:05:42,713 | INFO     | [job] queue monitor thread has finished
[2025-12-15 13:06:13] 2025-12-15 18:05:42,718 | INFO     | [data] control thread has finished
[2025-12-15 13:06:13] 2025-12-15 18:05:42,770 | INFO     | [data] copytool_in thread has finished
[2025-12-15 13:06:13] 2025-12-15 18:05:42,868 | INFO     | [job] job monitor thread has finished
[2025-12-15 13:06:13] 2025-12-15 18:05:43,174 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 13:06:13] 2025-12-15 18:05:43,207 | INFO     | all payload control threads have been joined
[2025-12-15 13:06:13] 2025-12-15 18:05:43,369 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 13:06:13] 2025-12-15 18:05:43,419 | INFO     | [payload] validate_post thread has finished
[2025-12-15 13:06:13] 2025-12-15 18:05:43,456 | INFO     | [payload] failed_post thread has finished
[2025-12-15 13:06:13] 2025-12-15 18:05:43,469 | INFO     | [job] control thread has finished
[2025-12-15 13:06:13] 2025-12-15 18:05:43,782 | INFO     | [job] validate thread has finished
[2025-12-15 13:06:13] 2025-12-15 18:05:44,076 | INFO     | [data] copytool_out thread has finished
[2025-12-15 13:06:13] 2025-12-15 18:05:44,092 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 13:06:13] 2025-12-15 18:05:44,099 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 13:06:13] 2025-12-15 18:05:44,212 | INFO     | [payload] control thread has finished
[2025-12-15 13:06:13] 2025-12-15 18:05:44,683 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 13:06:13] 2025-12-15 18:05:48,688 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 13:06:13] 2025-12-15 18:05:56,454 | INFO     | [monitor] cgroup control has ended
[2025-12-15 13:06:13] 2025-12-15 18:05:56,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139894929528640)>', '<ExcThread(monitor, started 139894416447232)>']
[2025-12-15 13:06:13] 2025-12-15 18:06:01,795 | INFO     | all workflow threads have been joined
[2025-12-15 13:06:13] 2025-12-15 18:06:01,795 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 13:06:13] 2025-12-15 18:06:01,796 | INFO     | traces error code: 0
[2025-12-15 13:06:13] 2025-12-15 18:06:01,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 13:06:13] 2025-12-15 18:06:13,056 | INFO     | PID=3173563 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-15 13:06:13] 2025-12-15 18:06:13,056 | INFO     | .. there are 8 such processes running
[2025-12-15 13:06:13] 2025-12-15 18:06:13,058 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 13:06:13] 2025-12-15 18:06:13,058 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 13:06:13] 2025-12-15 18:06:13,058 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 13:06:13] 2025-12-15 18:06:13,058 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 13:06:13] 2025-12-15 18:06:13,058 | INFO     | [monitor] control thread has ended
[2025-12-15 13:06:13] 2025-12-15 18:06:13,741 [wrapper] ==== pilot stdout END ====
[2025-12-15 13:06:13] 2025-12-15 18:06:13,744 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 13:06:13] 2025-12-15 18:06:13,747 [wrapper] pilotpid: 3173563
[2025-12-15 13:06:13] 2025-12-15 18:06:13,750 [wrapper] Pilot exit status: 0
[2025-12-15 13:06:13] 2025-12-15 18:06:13,833 [wrapper] pandaids: 6931153401
[2025-12-15 13:06:13] 2025-12-15 18:06:13,865 [wrapper] cleanup supervisor_pilot 3609393 3173564
[2025-12-15 13:06:13] 2025-12-15 18:06:13,868 [wrapper] Test setup, not cleaning
[2025-12-15 13:06:13] 2025-12-15 18:06:13,871 [wrapper] apfmon messages muted
[2025-12-15 13:06:13] 2025-12-15 18:06:13,873 [wrapper] ==== wrapper stdout END ====
[2025-12-15 13:06:13] 2025-12-15 18:06:13,876 [wrapper] ==== wrapper stderr END ====
[2025-12-15 13:06:13]  *** Error codes and diagnostics ***
[2025-12-15 13:06:13]     "exeErrorCode": 0,
[2025-12-15 13:06:13]     "exeErrorDiag": "",
[2025-12-15 13:06:13]     "pilotErrorCode": 0,
[2025-12-15 13:06:13]     "pilotErrorDiag": "",
[2025-12-15 13:06:13]  *** Listing of results directory ***
[2025-12-15 13:06:13] total 380936
[2025-12-15 13:06:13] -rw-r--r--. 1 boincer umatlas    579449 Dec 14 20:16 pilot3.tar.gz
[2025-12-15 13:06:13] -rwx------. 1 boincer umatlas     36322 Dec 14 20:20 runpilot2-wrapper.sh
[2025-12-15 13:06:13] -rw-r--r--. 1 boincer umatlas      5112 Dec 14 20:22 queuedata.json
[2025-12-15 13:06:13] -rw-r--r--. 1 boincer umatlas       100 Dec 15 07:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 13:06:13] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 15 07:04 run_atlas
[2025-12-15 13:06:13] -rw-r--r--. 1 boincer umatlas       105 Dec 15 07:04 job.xml
[2025-12-15 13:06:13] -rw-r--r--. 2 boincer umatlas 196747148 Dec 15 07:04 EVNT.47898875._000102.pool.root.1
[2025-12-15 13:06:13] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 07:04 start_atlas.sh
[2025-12-15 13:06:13] drwxrwx--x. 2 boincer umatlas      4096 Dec 15 07:04 shared
[2025-12-15 13:06:13] -rw-r--r--. 2 boincer umatlas    592395 Dec 15 07:04 input.tar.gz
[2025-12-15 13:06:13] -rw-r--r--. 1 boincer umatlas         0 Dec 15 07:04 boinc_lockfile
[2025-12-15 13:06:13] -rw-r--r--. 1 boincer umatlas      2500 Dec 15 07:04 pandaJob.out
[2025-12-15 13:06:13] -rw-------. 1 boincer umatlas        57 Dec 15 07:04 setup.sh.local
[2025-12-15 13:06:13] -rw-------. 1 boincer umatlas    991012 Dec 15 07:05 agis_schedconf.cvmfs.json
[2025-12-15 13:06:13] drwx------. 5 boincer umatlas      4096 Dec 15 07:05 pilot3
[2025-12-15 13:06:13] -rw-r--r--. 1 boincer umatlas      6612 Dec 15 13:03 init_data.xml
[2025-12-15 13:06:13] -rw-------. 1 boincer umatlas 182823643 Dec 15 13:04 HITS.47898878._002572.pool.root.1
[2025-12-15 13:06:13] -rw-r--r--. 1 boincer umatlas       531 Dec 15 13:04 boinc_task_state.xml
[2025-12-15 13:06:13] -rw-------. 1 boincer umatlas      1042 Dec 15 13:05 memory_monitor_summary.json
[2025-12-15 13:06:13] -rw-------. 1 boincer umatlas   1516240 Dec 15 13:05 agis_ddmendpoints.agis.ALL.json
[2025-12-15 13:06:13] -rw-------. 1 boincer umatlas    564446 Dec 15 13:05 log.47898878._002572.job.log.tgz.1
[2025-12-15 13:06:13] -rw-------. 1 boincer umatlas      7820 Dec 15 13:05 heartbeat.json
[2025-12-15 13:06:13] -rw-r--r--. 1 boincer umatlas      8192 Dec 15 13:06 boinc_mmap_file
[2025-12-15 13:06:13] -rw-r--r--. 1 boincer umatlas        28 Dec 15 13:06 wrapper_checkpoint.txt
[2025-12-15 13:06:13] -rw-------. 1 boincer umatlas        95 Dec 15 13:06 pilot_heartbeat.json
[2025-12-15 13:06:13] -rw-------. 1 boincer umatlas       822 Dec 15 13:06 pilotlog.txt
[2025-12-15 13:06:13] -rw-------. 1 boincer umatlas   2736343 Dec 15 13:06 log.47898878._002572.job.log.1
[2025-12-15 13:06:13] -rw-------. 1 boincer umatlas       357 Dec 15 13:06 output.list
[2025-12-15 13:06:13] -rw-r--r--. 1 boincer umatlas       620 Dec 15 13:06 runtime_log
[2025-12-15 13:06:13] -rw-------. 1 boincer umatlas   3317760 Dec 15 13:06 result.tar.gz
[2025-12-15 13:06:13] -rw-r--r--. 1 boincer umatlas      9338 Dec 15 13:06 runtime_log.err
[2025-12-15 13:06:13] -rw-------. 1 boincer umatlas       655 Dec 15 13:06 2ClLDm4QCp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmoaSKDmGEgNNn.diag
[2025-12-15 13:06:13] -rw-r--r--. 1 boincer umatlas     21492 Dec 15 13:06 stderr.txt
[2025-12-15 13:06:13] HITS file was successfully produced:
[2025-12-15 13:06:13] -rw-------. 1 boincer umatlas 182823643 Dec 15 13:04 shared/HITS.pool.root.1
[2025-12-15 13:06:13]  *** Contents of shared directory: ***
[2025-12-15 13:06:13] total 374516
[2025-12-15 13:06:13] -rw-r--r--. 2 boincer umatlas 196747148 Dec 15 07:04 ATLAS.root_0
[2025-12-15 13:06:13] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 07:04 start_atlas.sh
[2025-12-15 13:06:13] -rw-r--r--. 2 boincer umatlas    592395 Dec 15 07:04 input.tar.gz
[2025-12-15 13:06:13] -rw-------. 1 boincer umatlas 182823643 Dec 15 13:04 HITS.pool.root.1
[2025-12-15 13:06:13] -rw-------. 1 boincer umatlas   3317760 Dec 15 13:06 result.tar.gz
13:06:15 (3169749): run_atlas exited; CPU time 55859.918279
13:06:15 (3169749): called boinc_finish(0)

</stderr_txt>
]]>

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