Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:41:57 (1319360): wrapper (7.7.26015): starting
03:41:57 (1319360): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 03:41:57] Arguments: --nthreads 4
[2025-12-16 03:41:57] Threads: 4
[2025-12-16 03:41:57] Checking for CVMFS
[2025-12-16 03:41:57] No cvmfs_config command found, will try listing directly
[2025-12-16 03:41:57] CVMFS is ok
[2025-12-16 03:41:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 03:41:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 03:41:57] Further information can be found at the LHC@home message board.
[2025-12-16 03:41:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 03:41:57] Checking for apptainer binary...
[2025-12-16 03:41:57] which: no apptainer in ((null))
[2025-12-16 03:41:57] apptainer is not installed, using version from CVMFS
[2025-12-16 03:41:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 03:41:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-12-16 03:41:57] apptainer works
[2025-12-16 03:41:57] Set ATHENA_PROC_NUMBER=4
[2025-12-16 03:41:57] Set ATHENA_CORE_NUMBER=4
[2025-12-16 03:41:57] Starting ATLAS job with PandaID=6931148753
[2025-12-16 03:41:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 06:16:41]  *** The last 200 lines of the pilot log: ***
[2025-12-16 06:16:41] 2025-12-16 05:09:28,276 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 06:16:41] 2025-12-16 05:09:29,220 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 06:16:41] 2025-12-16 05:09:29,241 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2735.4611171875003
[2025-12-16 06:16:41] 2025-12-16 05:09:29,265 | INFO     | using path: /scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6931148753/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 06:16:41] 2025-12-16 05:09:29,265 | INFO     | extracted standard info from prmon json
[2025-12-16 06:16:41] 2025-12-16 05:09:29,266 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 06:16:41] 2025-12-16 05:09:29,266 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 06:16:41] 2025-12-16 05:09:29,266 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 06:16:41] 2025-12-16 05:09:29,266 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 06:16:41] 2025-12-16 05:09:29,270 | INFO     | fitting pss+swap vs Time
[2025-12-16 06:16:41] 2025-12-16 05:09:29,270 | INFO     | sum of square deviations: 945282840.0
[2025-12-16 06:16:41] 2025-12-16 05:09:29,271 | INFO     | sum of deviations: -26493094830.0
[2025-12-16 06:16:41] 2025-12-16 05:09:29,271 | INFO     | mean x: 1765857357.0
[2025-12-16 06:16:41] 2025-12-16 05:09:29,271 | INFO     | mean y: 2367935.6137931035
[2025-12-16 06:16:41] 2025-12-16 05:09:29,271 | INFO     | intersect: 49493403248.65742
[2025-12-16 06:16:41] 2025-12-16 05:09:29,271 | INFO     | chi2: 2.297592771914475
[2025-12-16 06:16:41] 2025-12-16 05:09:29,272 | INFO     | sum of square deviations: 850825255.0
[2025-12-16 06:16:41] 2025-12-16 05:09:29,272 | INFO     | sum of deviations: -16454122645.5
[2025-12-16 06:16:41] 2025-12-16 05:09:29,273 | INFO     | mean x: 1765857204.5
[2025-12-16 06:16:41] 2025-12-16 05:09:29,273 | INFO     | mean y: 2383737.3785714284
[2025-12-16 06:16:41] 2025-12-16 05:09:29,273 | INFO     | intersect: 34152323277.293583
[2025-12-16 06:16:41] 2025-12-16 05:09:29,273 | INFO     | chi2: 1.513159266961393
[2025-12-16 06:16:41] 2025-12-16 05:09:29,273 | INFO     | current chi2=1.513159266961393 (change=34.14153781043848 %)
[2025-12-16 06:16:41] 2025-12-16 05:09:29,273 | INFO     | sum of square deviations: 762879420.0
[2025-12-16 06:16:41] 2025-12-16 05:09:29,274 | INFO     | sum of deviations: -15606943452.0
[2025-12-16 06:16:41] 2025-12-16 05:09:29,274 | INFO     | mean x: 1765857052.0
[2025-12-16 06:16:41] 2025-12-16 05:09:29,274 | INFO     | mean y: 2385206.9185185186
[2025-12-16 06:16:41] 2025-12-16 05:09:29,274 | INFO     | intersect: 36128187571.438225
[2025-12-16 06:16:41] 2025-12-16 05:09:29,275 | INFO     | chi2: 1.5080782669361799
[2025-12-16 06:16:41] 2025-12-16 05:09:29,275 | INFO     | current chi2=1.5080782669361799 (change=0.335787523240453 %)
[2025-12-16 06:16:41] 2025-12-16 05:09:29,275 | INFO     | right removable region: 134
[2025-12-16 06:16:41] 2025-12-16 05:09:29,275 | INFO     | sum of square deviations: 850825255.0
[2025-12-16 06:16:41] 2025-12-16 05:09:29,276 | INFO     | sum of deviations: -39962595018.5
[2025-12-16 06:16:41] 2025-12-16 05:09:29,276 | INFO     | mean x: 1765857509.5
[2025-12-16 06:16:41] 2025-12-16 05:09:29,276 | INFO     | mean y: 2389083.7357142856
[2025-12-16 06:16:41] 2025-12-16 05:09:29,276 | INFO     | intersect: 82943331536.7492
[2025-12-16 06:16:41] 2025-12-16 05:09:29,276 | INFO     | chi2: 1.0971074132812784
[2025-12-16 06:16:41] 2025-12-16 05:09:29,277 | INFO     | current chi2=1.0971074132812784 (change=52.2497012224185 %)
[2025-12-16 06:16:41] 2025-12-16 05:09:29,277 | INFO     | sum of square deviations: 762879420.0
[2025-12-16 06:16:41] 2025-12-16 05:09:29,278 | INFO     | sum of deviations: -33016463256.0
[2025-12-16 06:16:41] 2025-12-16 05:09:29,278 | INFO     | mean x: 1765857662.0
[2025-12-16 06:16:41] 2025-12-16 05:09:29,278 | INFO     | mean y: 2377023.6148148146
[2025-12-16 06:16:41] 2025-12-16 05:09:29,278 | INFO     | intersect: 76426479030.12729
[2025-12-16 06:16:41] 2025-12-16 05:09:29,278 | INFO     | chi2: 1.075339982137384
[2025-12-16 06:16:41] 2025-12-16 05:09:29,278 | INFO     | current chi2=1.075339982137384 (change=1.9840747478673433 %)
[2025-12-16 06:16:41] 2025-12-16 05:09:29,279 | INFO     | left removable region: 20
[2025-12-16 06:16:41] 2025-12-16 05:09:29,279 | INFO     | sum of square deviations: 459366752.5
[2025-12-16 06:16:41] 2025-12-16 05:09:29,279 | INFO     | sum of deviations: -9242584854.5
[2025-12-16 06:16:41] 2025-12-16 05:09:29,279 | INFO     | mean x: 1765857631.5
[2025-12-16 06:16:41] 2025-12-16 05:09:29,280 | INFO     | mean y: 2366579.201754386
[2025-12-16 06:16:41] 2025-12-16 05:09:29,280 | INFO     | intersect: 35531905692.081154
[2025-12-16 06:16:41] 2025-12-16 05:09:29,280 | INFO     | chi2: 0.1538640203728841
[2025-12-16 06:16:41] 2025-12-16 05:09:29,280 | INFO     | current memory leak: -20.12 B/s (using 114 data points, chi2=0.15)
[2025-12-16 06:16:41] 2025-12-16 05:09:29,280 | INFO     | could have reported an average CPU frequency of 2716 MHz (8 samples)
[2025-12-16 06:16:41] 2025-12-16 05:09:29,281 | INFO     | ..............................
[2025-12-16 06:16:41] 2025-12-16 05:09:29,281 | INFO     | . Timing measurements:
[2025-12-16 06:16:41] 2025-12-16 05:09:29,281 | INFO     | . get job = 0 s
[2025-12-16 06:16:41] 2025-12-16 05:09:29,281 | INFO     | . initial setup = 1 s
[2025-12-16 06:16:41] 2025-12-16 05:09:29,281 | INFO     | . payload setup = 8 s
[2025-12-16 06:16:41] 2025-12-16 05:09:29,281 | INFO     | . stage-in = 0 s
[2025-12-16 06:16:41] 2025-12-16 05:09:29,281 | INFO     | . payload execution = 8797 s
[2025-12-16 06:16:41] 2025-12-16 05:09:29,281 | INFO     | . stage-out = 1 s
[2025-12-16 06:16:41] 2025-12-16 05:09:29,281 | INFO     | . log creation = 0 s
[2025-12-16 06:16:41] 2025-12-16 05:09:29,281 | INFO     | ..............................
[2025-12-16 06:16:41] 2025-12-16 05:09:29,385 | INFO     | 
[2025-12-16 06:16:41] 2025-12-16 05:09:29,385 | INFO     | job summary report
[2025-12-16 06:16:41] 2025-12-16 05:09:29,385 | INFO     | --------------------------------------------------
[2025-12-16 06:16:41] 2025-12-16 05:09:29,385 | INFO     | PanDA job id: 6931148753
[2025-12-16 06:16:41] 2025-12-16 05:09:29,385 | INFO     | task id: 47898896
[2025-12-16 06:16:41] 2025-12-16 05:09:29,385 | INFO     | errors: (none)
[2025-12-16 06:16:41] 2025-12-16 05:09:29,386 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 06:16:41] 2025-12-16 05:09:29,386 | INFO     | pilot state: finished 
[2025-12-16 06:16:41] 2025-12-16 05:09:29,386 | INFO     | transexitcode: 0
[2025-12-16 06:16:41] 2025-12-16 05:09:29,386 | INFO     | exeerrorcode: 0
[2025-12-16 06:16:41] 2025-12-16 05:09:29,386 | INFO     | exeerrordiag: 
[2025-12-16 06:16:41] 2025-12-16 05:09:29,386 | INFO     | exitcode: 0
[2025-12-16 06:16:41] 2025-12-16 05:09:29,386 | INFO     | exitmsg: OK
[2025-12-16 06:16:41] 2025-12-16 05:09:29,386 | INFO     | cpuconsumptiontime: 33518 s
[2025-12-16 06:16:41] 2025-12-16 05:09:29,386 | INFO     | nevents: 400
[2025-12-16 06:16:41] 2025-12-16 05:09:29,386 | INFO     | neventsw: 0
[2025-12-16 06:16:41] 2025-12-16 05:09:29,386 | INFO     | pid: 1331088
[2025-12-16 06:16:41] 2025-12-16 05:09:29,386 | INFO     | pgrp: 1331088
[2025-12-16 06:16:41] 2025-12-16 05:09:29,386 | INFO     | corecount: 4
[2025-12-16 06:16:41] 2025-12-16 05:09:29,386 | INFO     | event service: False
[2025-12-16 06:16:41] 2025-12-16 05:09:29,386 | INFO     | sizes: {0: 2283790, 1: 2283989, 7: 2284251, 11: 2284279, 8807: 2312712, 8808: 2321734, 8809: 2321918, 8820: 2322112}
[2025-12-16 06:16:41] 2025-12-16 05:09:29,387 | INFO     | --------------------------------------------------
[2025-12-16 06:16:41] 2025-12-16 05:09:29,387 | INFO     | 
[2025-12-16 06:16:41] 2025-12-16 05:09:29,387 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2025-12-16 06:16:41] 2025-12-16 05:09:29,416 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 06:16:41] 2025-12-16 05:09:29,417 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 06:16:41] 2025-12-16 05:09:29,417 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 06:16:41] 2025-12-16 05:09:29,417 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 06:16:41] 2025-12-16 05:09:29,417 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 06:16:41] 2025-12-16 05:09:29,417 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 06:16:41] 2025-12-16 05:09:29,417 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 06:16:41] 2025-12-16 05:09:29,417 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 06:16:41] 2025-12-16 05:09:29,417 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 06:16:41] 2025-12-16 05:09:29,417 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 06:16:41] 2025-12-16 05:09:29,417 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 06:16:41] 2025-12-16 05:09:29,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 06:16:41] 2025-12-16 05:09:29,418 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 06:16:41] 2025-12-16 05:09:29,418 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 06:16:41] 2025-12-16 05:09:29,418 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 06:16:41] 2025-12-16 05:09:29,418 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 06:16:41] 2025-12-16 05:09:29,418 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 06:16:41] 2025-12-16 05:09:29,418 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 06:16:41] 2025-12-16 05:09:29,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 06:16:41] 2025-12-16 05:09:29,418 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 06:16:41] 2025-12-16 05:09:29,418 | INFO     | job 6931148753 has completed (purged errors)
[2025-12-16 06:16:41] 2025-12-16 05:09:29,419 | INFO     | overall cleanup function is called
[2025-12-16 06:16:41] 2025-12-16 05:09:30,427 | INFO     | --- collectZombieJob: --- 10, [1331088]
[2025-12-16 06:16:41] 2025-12-16 05:09:30,427 | INFO     | zombie collector waiting for pid 1331088
[2025-12-16 06:16:41] 2025-12-16 05:09:30,427 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 06:16:41] 2025-12-16 05:09:30,427 | INFO     | collected zombie processes
[2025-12-16 06:16:41] 2025-12-16 05:09:30,427 | INFO     | will attempt to kill all subprocesses of pid=1331088
[2025-12-16 06:16:41] 2025-12-16 05:09:31,198 | INFO     | process IDs to be killed: [1331088] (in reverse order)
[2025-12-16 06:16:41] 2025-12-16 05:09:31,445 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 06:16:41] 2025-12-16 05:09:31,445 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 06:16:41] 2025-12-16 05:09:31,474 | INFO     | did not find any defunct processes belonging to 1331088
[2025-12-16 06:16:41] 2025-12-16 05:09:31,503 | INFO     | did not find any defunct processes belonging to 1331088
[2025-12-16 06:16:41] 2025-12-16 05:09:31,503 | INFO     | ready for new job
[2025-12-16 06:16:41] 2025-12-16 05:09:31,504 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 06:16:41] 2025-12-16 05:09:31,506 | INFO     | ***************************************
[2025-12-16 06:16:41] 2025-12-16 05:09:31,506 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 06:16:41] 2025-12-16 05:09:31,506 | INFO     | ***************************************
[2025-12-16 06:16:41] 2025-12-16 05:09:31,506 | INFO     | 
[2025-12-16 06:16:41] 2025-12-16 05:09:31,514 | INFO     | architecture information:
[2025-12-16 06:16:41] 2025-12-16 05:09:31,515 | INFO     | executing command: cat /etc/os-release
[2025-12-16 06:16:41] 2025-12-16 05:09:31,539 | INFO     | cat /etc/os-release:
[2025-12-16 06:16:41] NAME="CentOS Linux"
[2025-12-16 06:16:41] VERSION="7 (Core)"
[2025-12-16 06:16:41] ID="centos"
[2025-12-16 06:16:41] ID_LIKE="rhel fedora"
[2025-12-16 06:16:41] VERSION_ID="7"
[2025-12-16 06:16:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 06:16:41] ANSI_COLOR="0;31"
[2025-12-16 06:16:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 06:16:41] HOME_URL="https://www.centos.org/"
[2025-12-16 06:16:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 06:16:41] 
[2025-12-16 06:16:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 06:16:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 06:16:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 06:16:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 06:16:41] 
[2025-12-16 06:16:41] 2025-12-16 05:09:31,540 | INFO     | ***************************************
[2025-12-16 06:16:41] 2025-12-16 05:09:32,042 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2025-12-16 06:16:41] 2025-12-16 05:09:32,067 | INFO     | sufficient remaining disk space (3287265837056 B)
[2025-12-16 06:16:41] 2025-12-16 05:09:32,067 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 06:16:41] 2025-12-16 05:09:32,067 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 06:16:41] 2025-12-16 05:09:32,068 | INFO     | update_server=False
[2025-12-16 06:16:41] 2025-12-16 05:09:32,068 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 06:16:41] 2025-12-16 05:09:32,068 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 06:16:41] 2025-12-16 05:09:32,068 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 06:16:41] 2025-12-16 05:09:32,069 | INFO     | aborting loop
[2025-12-16 06:16:41] 2025-12-16 05:09:32,117 | INFO     | all data control threads have been joined
[2025-12-16 06:16:41] 2025-12-16 05:09:32,809 | INFO     | all payload control threads have been joined
[2025-12-16 06:16:41] 2025-12-16 05:09:33,069 | INFO     | [job] retrieve thread has finished
[2025-12-16 06:16:41] 2025-12-16 05:09:33,074 | INFO     | [job] job monitor thread has finished
[2025-12-16 06:16:41] 2025-12-16 05:09:33,122 | INFO     | [data] control thread has finished
[2025-12-16 06:16:41] 2025-12-16 05:09:33,199 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 06:16:41] 2025-12-16 05:09:33,217 | INFO     | [payload] failed_post thread has finished
[2025-12-16 06:16:41] 2025-12-16 05:09:33,336 | INFO     | all job control threads have been joined
[2025-12-16 06:16:41] 2025-12-16 05:09:33,482 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 06:16:41] 2025-12-16 05:09:33,814 | INFO     | [payload] control thread has finished
[2025-12-16 06:16:41] 2025-12-16 05:09:33,833 | INFO     | [payload] validate_post thread has finished
[2025-12-16 06:16:41] 2025-12-16 05:09:34,069 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 06:16:41] 2025-12-16 05:09:34,075 | INFO     | [data] copytool_out thread has finished
[2025-12-16 06:16:41] 2025-12-16 05:09:34,144 | INFO     | [data] copytool_in thread has finished
[2025-12-16 06:16:41] 2025-12-16 05:09:34,146 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 06:16:41] 2025-12-16 05:09:34,326 | INFO     | [job] validate thread has finished
[2025-12-16 06:16:41] 2025-12-16 05:09:34,342 | INFO     | [job] control thread has finished
[2025-12-16 06:16:41] 2025-12-16 05:09:34,395 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 06:16:41] 2025-12-16 05:09:35,401 | INFO     | [job] queue monitor thread has finished
[2025-12-16 06:16:41] 2025-12-16 05:09:38,075 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 06:16:41] 2025-12-16 05:09:42,970 | INFO     | job.realtimelogging is not enabled
[2025-12-16 06:16:41] 2025-12-16 05:09:43,975 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 06:16:41] 2025-12-16 05:10:01,685 | INFO     | PID=1323390 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-16 06:16:41] 2025-12-16 05:10:01,685 | INFO     | .. there are 7 such processes running
[2025-12-16 06:16:41] 2025-12-16 05:10:01,685 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 06:16:41] 2025-12-16 05:10:01,685 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 06:16:41] 2025-12-16 05:10:01,686 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 06:16:41] 2025-12-16 05:10:25,362 | INFO     | [monitor] cgroup control has ended
[2025-12-16 06:16:41] 2025-12-16 05:10:25,836 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22962454136640)>', '<ExcThread(monitor, started 22962214237952)>']
[2025-12-16 06:16:41] 2025-12-16 05:10:26,810 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 06:16:41] 2025-12-16 05:10:26,810 | INFO     | [monitor] control thread has ended
[2025-12-16 06:16:41] 2025-12-16 05:10:30,861 | INFO     | all workflow threads have been joined
[2025-12-16 06:16:41] 2025-12-16 05:10:30,864 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 06:16:41] 2025-12-16 05:10:30,864 | INFO     | traces error code: 0
[2025-12-16 06:16:41] 2025-12-16 05:10:30,864 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 06:16:41] 2025-12-16 05:10:31,063 [wrapper] ==== pilot stdout END ====
[2025-12-16 06:16:41] 2025-12-16 05:10:31,067 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 06:16:41] 2025-12-16 05:10:31,071 [wrapper] pilotpid: 1323390
[2025-12-16 06:16:41] 2025-12-16 05:10:31,075 [wrapper] Pilot exit status: 0
[2025-12-16 06:16:41] 2025-12-16 05:10:31,091 [wrapper] pandaids: 6931148753
[2025-12-16 06:16:41] 2025-12-16 05:10:31,263 [wrapper] cleanup supervisor_pilot 1587955 1323391
[2025-12-16 06:16:41] 2025-12-16 05:10:31,268 [wrapper] Test setup, not cleaning
[2025-12-16 06:16:41] 2025-12-16 05:10:31,272 [wrapper] apfmon messages muted
[2025-12-16 06:16:41] 2025-12-16 05:10:31,275 [wrapper] ==== wrapper stdout END ====
[2025-12-16 06:16:41] 2025-12-16 05:10:31,279 [wrapper] ==== wrapper stderr END ====
[2025-12-16 06:16:41]  *** Error codes and diagnostics ***
[2025-12-16 06:16:41]     "exeErrorCode": 0,
[2025-12-16 06:16:41]     "exeErrorDiag": "",
[2025-12-16 06:16:41]     "pilotErrorCode": 0,
[2025-12-16 06:16:41]     "pilotErrorDiag": "",
[2025-12-16 06:16:41]  *** Listing of results directory ***
[2025-12-16 06:16:41] total 375844
[2025-12-16 06:16:41] -rw-r--r-- 1 boinc boinc    579449 Dec 15 02:16 pilot3.tar.gz
[2025-12-16 06:16:41] -rwx------ 1 boinc boinc     36322 Dec 15 02:19 runpilot2-wrapper.sh
[2025-12-16 06:16:41] -rw-r--r-- 1 boinc boinc      5112 Dec 15 02:22 queuedata.json
[2025-12-16 06:16:41] -rw-r--r-- 1 boinc boinc       100 Dec 16 03:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 06:16:41] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 03:41 run_atlas
[2025-12-16 06:16:41] -rw-r--r-- 1 boinc boinc       105 Dec 16 03:41 job.xml
[2025-12-16 06:16:41] -rw-r--r-- 1 boinc boinc      6691 Dec 16 03:41 init_data.xml
[2025-12-16 06:16:41] -rw-r--r-- 2 boinc boinc 199406772 Dec 16 03:41 EVNT.47898894._000041.pool.root.1
[2025-12-16 06:16:41] -rw-r--r-- 2 boinc boinc     15847 Dec 16 03:41 start_atlas.sh
[2025-12-16 06:16:41] drwxrwx--x 2 boinc boinc      4096 Dec 16 03:41 shared
[2025-12-16 06:16:41] -rw-r--r-- 2 boinc boinc    592396 Dec 16 03:41 input.tar.gz
[2025-12-16 06:16:41] -rw-r--r-- 1 boinc boinc         0 Dec 16 03:41 boinc_lockfile
[2025-12-16 06:16:41] -rw-r--r-- 1 boinc boinc      2506 Dec 16 03:41 pandaJob.out
[2025-12-16 06:16:41] -rw------- 1 boinc boinc    994523 Dec 16 03:42 agis_schedconf.cvmfs.json
[2025-12-16 06:16:41] -rw------- 1 boinc boinc   1516240 Dec 16 03:42 agis_ddmendpoints.agis.ALL.json
[2025-12-16 06:16:41] drwx------ 5 boinc boinc      4096 Dec 16 03:42 pilot3
[2025-12-16 06:16:41] -rw------- 1 boinc boinc 178423697 Dec 16 06:08 HITS.47898896._001010.pool.root.1
[2025-12-16 06:16:41] -rw-r--r-- 1 boinc boinc       528 Dec 16 06:09 boinc_task_state.xml
[2025-12-16 06:16:41] -rw------- 1 boinc boinc      1026 Dec 16 06:09 memory_monitor_summary.json
[2025-12-16 06:16:41] -rw------- 1 boinc boinc    316479 Dec 16 06:09 log.47898896._001010.job.log.tgz.1
[2025-12-16 06:16:41] -rw------- 1 boinc boinc        95 Dec 16 06:09 pilot_heartbeat.json
[2025-12-16 06:16:41] -rw------- 1 boinc boinc      7777 Dec 16 06:09 heartbeat.json
[2025-12-16 06:16:41] -rw------- 1 boinc boinc      4908 Dec 16 06:10 pilotlog.txt
[2025-12-16 06:16:41] -rw------- 1 boinc boinc   1241030 Dec 16 06:10 log.47898896._001010.job.log.1
[2025-12-16 06:16:41] -rw------- 1 boinc boinc       357 Dec 16 06:10 output.list
[2025-12-16 06:16:41] -rw-r--r-- 1 boinc boinc       620 Dec 16 06:10 runtime_log
[2025-12-16 06:16:41] -rw------- 1 boinc boinc   1576960 Dec 16 06:10 result.tar.gz
[2025-12-16 06:16:41] -rw------- 1 boinc boinc       663 Dec 16 06:10 uFvLDmtQCp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5sWKDmDH7vVn.diag
[2025-12-16 06:16:41] -rw-r--r-- 1 boinc boinc      9222 Dec 16 06:10 runtime_log.err
[2025-12-16 06:16:41] -rw-r--r-- 1 boinc boinc        26 Dec 16 06:16 wrapper_checkpoint.txt
[2025-12-16 06:16:41] -rw-r--r-- 1 boinc boinc      8192 Dec 16 06:16 boinc_mmap_file
[2025-12-16 06:16:41] -rw-r--r-- 1 boinc boinc     20855 Dec 16 06:16 stderr.txt
[2025-12-16 06:16:41] HITS file was successfully produced:
[2025-12-16 06:16:41] -rw------- 1 boinc boinc 178423697 Dec 16 06:08 shared/HITS.pool.root.1
[2025-12-16 06:16:41]  *** Contents of shared directory: ***
[2025-12-16 06:16:41] total 371124
[2025-12-16 06:16:41] -rw-r--r-- 2 boinc boinc 199406772 Dec 16 03:41 ATLAS.root_0
[2025-12-16 06:16:41] -rw-r--r-- 2 boinc boinc     15847 Dec 16 03:41 start_atlas.sh
[2025-12-16 06:16:41] -rw-r--r-- 2 boinc boinc    592396 Dec 16 03:41 input.tar.gz
[2025-12-16 06:16:41] -rw------- 1 boinc boinc 178423697 Dec 16 06:08 HITS.pool.root.1
[2025-12-16 06:16:41] -rw------- 1 boinc boinc   1576960 Dec 16 06:10 result.tar.gz
06:16:42 (1319360): run_atlas exited; CPU time 34064.768375
06:16:42 (1319360): called boinc_finish(0)

</stderr_txt>
]]>

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