Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:03:27 (16298): wrapper (7.7.26015): starting
06:03:27 (16298): wrapper: running run_atlas (--nthreads 12)
[2025-12-15 06:03:27] Arguments: --nthreads 12
[2025-12-15 06:03:27] Threads: 12
[2025-12-15 06:03:27] Checking for CVMFS
[2025-12-15 06:03:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 06:03:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 06:03:28] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 06:03:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 06:03:28] 2.11.2.0 2937 314957 93676 154029 0 57 14378999 20275200 1 130560 1 139553440 99.966 18889878 15825 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-15 06:03:28] CVMFS is ok
[2025-12-15 06:03:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 06:03:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 06:03:28] Further information can be found at the LHC@home message board.
[2025-12-15 06:03:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 06:03:28] Checking for apptainer binary...
[2025-12-15 06:03:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 06:03:28] Running /usr/bin/apptainer --version
[2025-12-15 06:03:28] apptainer version 1.3.2-1.el7
[2025-12-15 06:03:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 06:03:29] c-205-8.aglt2.org
[2025-12-15 06:03:29] apptainer works
[2025-12-15 06:03:29] Set ATHENA_PROC_NUMBER=12
[2025-12-15 06:03:29] Set ATHENA_CORE_NUMBER=12
[2025-12-15 06:03:29] Starting ATLAS job with PandaID=6929524763
[2025-12-15 06:03:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 07:47:59]  *** The last 200 lines of the pilot log: ***
[2025-12-15 07:47:59] 2025-12-15 12:47:06,153 | INFO     | mean y: 2616822.1979166665
[2025-12-15 07:47:59] 2025-12-15 12:47:06,153 | INFO     | intersect: -118567546370.24374
[2025-12-15 07:47:59] 2025-12-15 12:47:06,153 | INFO     | chi2: 1.3459075898719668
[2025-12-15 07:47:59] 2025-12-15 12:47:06,153 | INFO     | current chi2=1.3459075898719668 (change=-0.02029915942678046 %)
[2025-12-15 07:47:59] 2025-12-15 12:47:06,154 | INFO     | right removable region: 95
[2025-12-15 07:47:59] 2025-12-15 12:47:06,154 | INFO     | sum of square deviations: 274312120.0
[2025-12-15 07:47:59] 2025-12-15 12:47:06,154 | INFO     | sum of deviations: 4185213172.0000005
[2025-12-15 07:47:59] 2025-12-15 12:47:06,154 | INFO     | mean x: 1765799855.5
[2025-12-15 07:47:59] 2025-12-15 12:47:06,154 | INFO     | mean y: 2671249.5833333335
[2025-12-15 07:47:59] 2025-12-15 12:47:06,155 | INFO     | intersect: -26938350584.793865
[2025-12-15 07:47:59] 2025-12-15 12:47:06,155 | INFO     | chi2: 0.0216479220587438
[2025-12-15 07:47:59] 2025-12-15 12:47:06,155 | INFO     | current chi2=0.0216479220587438 (change=98.39124791568975 %)
[2025-12-15 07:47:59] 2025-12-15 12:47:06,155 | INFO     | sum of square deviations: 233641590.0
[2025-12-15 07:47:59] 2025-12-15 12:47:06,156 | INFO     | sum of deviations: 2584119820.0
[2025-12-15 07:47:59] 2025-12-15 12:47:06,156 | INFO     | mean x: 1765800008.0
[2025-12-15 07:47:59] 2025-12-15 12:47:06,156 | INFO     | mean y: 2677142.1208791207
[2025-12-15 07:47:59] 2025-12-15 12:47:06,156 | INFO     | intersect: -19527402236.421947
[2025-12-15 07:47:59] 2025-12-15 12:47:06,156 | INFO     | chi2: 0.0010094936056863244
[2025-12-15 07:47:59] 2025-12-15 12:47:06,156 | INFO     | current chi2=0.0010094936056863244 (change=95.33676441116629 %)
[2025-12-15 07:47:59] 2025-12-15 12:47:06,156 | INFO     | sum of square deviations: 197203697.5
[2025-12-15 07:47:59] 2025-12-15 12:47:06,157 | INFO     | sum of deviations: 1884602320.0
[2025-12-15 07:47:59] 2025-12-15 12:47:06,157 | INFO     | mean x: 1765800160.5
[2025-12-15 07:47:59] 2025-12-15 12:47:06,157 | INFO     | mean y: 2680055.3720930233
[2025-12-15 07:47:59] 2025-12-15 12:47:06,157 | INFO     | intersect: -16872414688.400003
[2025-12-15 07:47:59] 2025-12-15 12:47:06,157 | INFO     | chi2: 0.00055548023325393
[2025-12-15 07:47:59] 2025-12-15 12:47:06,158 | INFO     | current chi2=0.00055548023325393 (change=44.97436832437629 %)
[2025-12-15 07:47:59] 2025-12-15 12:47:06,158 | INFO     | sum of square deviations: 164765880.0
[2025-12-15 07:47:59] 2025-12-15 12:47:06,158 | INFO     | sum of deviations: 1380213816.0000002
[2025-12-15 07:47:59] 2025-12-15 12:47:06,158 | INFO     | mean x: 1765800313.0
[2025-12-15 07:47:59] 2025-12-15 12:47:06,158 | INFO     | mean y: 2682424.185185185
[2025-12-15 07:47:59] 2025-12-15 12:47:06,158 | INFO     | intersect: -14789105707.554985
[2025-12-15 07:47:59] 2025-12-15 12:47:06,159 | INFO     | chi2: 0.0003577929217115382
[2025-12-15 07:47:59] 2025-12-15 12:47:06,159 | INFO     | current chi2=0.0003577929217115382 (change=35.58854117712984 %)
[2025-12-15 07:47:59] 2025-12-15 12:47:06,159 | INFO     | sum of square deviations: 136095575.0
[2025-12-15 07:47:59] 2025-12-15 12:47:06,159 | INFO     | sum of deviations: 973966992.0
[2025-12-15 07:47:59] 2025-12-15 12:47:06,159 | INFO     | mean x: 1765800465.5
[2025-12-15 07:47:59] 2025-12-15 12:47:06,159 | INFO     | mean y: 2684585.210526316
[2025-12-15 07:47:59] 2025-12-15 12:47:06,160 | INFO     | intersect: -12634253594.853262
[2025-12-15 07:47:59] 2025-12-15 12:47:06,160 | INFO     | chi2: 0.00019425017585891188
[2025-12-15 07:47:59] 2025-12-15 12:47:06,160 | INFO     | current chi2=0.00019425017585891188 (change=45.70877061242666 %)
[2025-12-15 07:47:59] 2025-12-15 12:47:06,160 | INFO     | sum of square deviations: 110960220.0
[2025-12-15 07:47:59] 2025-12-15 12:47:06,160 | INFO     | sum of deviations: 730305664.0
[2025-12-15 07:47:59] 2025-12-15 12:47:06,161 | INFO     | mean x: 1765800618.0
[2025-12-15 07:47:59] 2025-12-15 12:47:06,161 | INFO     | mean y: 2686053.3098591547
[2025-12-15 07:47:59] 2025-12-15 12:47:06,161 | INFO     | intersect: -11619264523.393219
[2025-12-15 07:47:59] 2025-12-15 12:47:06,161 | INFO     | chi2: 0.00014751878842255708
[2025-12-15 07:47:59] 2025-12-15 12:47:06,161 | INFO     | current chi2=0.00014751878842255708 (change=24.05732052994218 %)
[2025-12-15 07:47:59] 2025-12-15 12:47:06,161 | INFO     | left removable region: 60
[2025-12-15 07:47:59] 2025-12-15 12:47:06,161 | INFO     | sum of square deviations: 13283970.0
[2025-12-15 07:47:59] 2025-12-15 12:47:06,162 | INFO     | sum of deviations: 74751352.00000003
[2025-12-15 07:47:59] 2025-12-15 12:47:06,162 | INFO     | mean x: 1765801350.0
[2025-12-15 07:47:59] 2025-12-15 12:47:06,162 | INFO     | mean y: 2692960.657142857
[2025-12-15 07:47:59] 2025-12-15 12:47:06,162 | INFO     | intersect: -9933797281.034554
[2025-12-15 07:47:59] 2025-12-15 12:47:06,162 | INFO     | chi2: 7.288760167372413e-05
[2025-12-15 07:47:59] 2025-12-15 12:47:06,162 | INFO     | current memory leak: 5.63 B/s (using 35 data points, chi2=0.00)
[2025-12-15 07:47:59] 2025-12-15 12:47:06,163 | INFO     | could have reported an average CPU frequency of 2144 MHz (7 samples)
[2025-12-15 07:47:59] 2025-12-15 12:47:06,163 | INFO     | ..............................
[2025-12-15 07:47:59] 2025-12-15 12:47:06,163 | INFO     | . Timing measurements:
[2025-12-15 07:47:59] 2025-12-15 12:47:06,163 | INFO     | . get job = 0 s
[2025-12-15 07:47:59] 2025-12-15 12:47:06,163 | INFO     | . initial setup = 2 s
[2025-12-15 07:47:59] 2025-12-15 12:47:06,163 | INFO     | . payload setup = 7 s
[2025-12-15 07:47:59] 2025-12-15 12:47:06,163 | INFO     | . stage-in = 0 s
[2025-12-15 07:47:59] 2025-12-15 12:47:06,163 | INFO     | . payload execution = 6165 s
[2025-12-15 07:47:59] 2025-12-15 12:47:06,163 | INFO     | . stage-out = 0 s
[2025-12-15 07:47:59] 2025-12-15 12:47:06,164 | INFO     | . log creation = 0 s
[2025-12-15 07:47:59] 2025-12-15 12:47:06,164 | INFO     | ..............................
[2025-12-15 07:47:59] 2025-12-15 12:47:06,244 | INFO     | 
[2025-12-15 07:47:59] 2025-12-15 12:47:06,244 | INFO     | job summary report
[2025-12-15 07:47:59] 2025-12-15 12:47:06,244 | INFO     | --------------------------------------------------
[2025-12-15 07:47:59] 2025-12-15 12:47:06,245 | INFO     | PanDA job id: 6929524763
[2025-12-15 07:47:59] 2025-12-15 12:47:06,245 | INFO     | task id: 47898763
[2025-12-15 07:47:59] 2025-12-15 12:47:06,245 | INFO     | errors: (none)
[2025-12-15 07:47:59] 2025-12-15 12:47:06,245 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 07:47:59] 2025-12-15 12:47:06,245 | INFO     | pilot state: finished 
[2025-12-15 07:47:59] 2025-12-15 12:47:06,245 | INFO     | transexitcode: 0
[2025-12-15 07:47:59] 2025-12-15 12:47:06,246 | INFO     | exeerrorcode: 0
[2025-12-15 07:47:59] 2025-12-15 12:47:06,246 | INFO     | exeerrordiag: 
[2025-12-15 07:47:59] 2025-12-15 12:47:06,246 | INFO     | exitcode: 0
[2025-12-15 07:47:59] 2025-12-15 12:47:06,246 | INFO     | exitmsg: OK
[2025-12-15 07:47:59] 2025-12-15 12:47:06,246 | INFO     | cpuconsumptiontime: 67143 s
[2025-12-15 07:47:59] 2025-12-15 12:47:06,246 | INFO     | nevents: 400
[2025-12-15 07:47:59] 2025-12-15 12:47:06,247 | INFO     | neventsw: 0
[2025-12-15 07:47:59] 2025-12-15 12:47:06,247 | INFO     | pid: 26422
[2025-12-15 07:47:59] 2025-12-15 12:47:06,247 | INFO     | pgrp: 26422
[2025-12-15 07:47:59] 2025-12-15 12:47:06,247 | INFO     | corecount: 12
[2025-12-15 07:47:59] 2025-12-15 12:47:06,247 | INFO     | event service: False
[2025-12-15 07:47:59] 2025-12-15 12:47:06,247 | INFO     | sizes: {0: 2283958, 5: 2284220, 11: 2284276, 6176: 2311054, 6177: 2320052, 6178: 2320108, 6185: 2320430}
[2025-12-15 07:47:59] 2025-12-15 12:47:06,248 | INFO     | --------------------------------------------------
[2025-12-15 07:47:59] 2025-12-15 12:47:06,248 | INFO     | 
[2025-12-15 07:47:59] 2025-12-15 12:47:06,248 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-15 07:47:59] 2025-12-15 12:47:06,273 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 07:47:59] 2025-12-15 12:47:06,273 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 07:47:59] 2025-12-15 12:47:06,274 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 07:47:59] 2025-12-15 12:47:06,274 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 07:47:59] 2025-12-15 12:47:06,274 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 07:47:59] 2025-12-15 12:47:06,274 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 07:47:59] 2025-12-15 12:47:06,274 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 07:47:59] 2025-12-15 12:47:06,274 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 07:47:59] 2025-12-15 12:47:06,275 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 07:47:59] 2025-12-15 12:47:06,275 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 07:47:59] 2025-12-15 12:47:06,275 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 07:47:59] 2025-12-15 12:47:06,275 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 07:47:59] 2025-12-15 12:47:06,275 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 07:47:59] 2025-12-15 12:47:06,275 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 07:47:59] 2025-12-15 12:47:06,276 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 07:47:59] 2025-12-15 12:47:06,276 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 07:47:59] 2025-12-15 12:47:06,276 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 07:47:59] 2025-12-15 12:47:06,276 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 07:47:59] 2025-12-15 12:47:06,276 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 07:47:59] 2025-12-15 12:47:06,277 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 07:47:59] 2025-12-15 12:47:06,277 | INFO     | job 6929524763 has completed (purged errors)
[2025-12-15 07:47:59] 2025-12-15 12:47:06,277 | INFO     | overall cleanup function is called
[2025-12-15 07:47:59] 2025-12-15 12:47:07,285 | INFO     | --- collectZombieJob: --- 10, [26422]
[2025-12-15 07:47:59] 2025-12-15 12:47:07,285 | INFO     | zombie collector waiting for pid 26422
[2025-12-15 07:47:59] 2025-12-15 12:47:07,285 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 07:47:59] 2025-12-15 12:47:07,286 | INFO     | collected zombie processes
[2025-12-15 07:47:59] 2025-12-15 12:47:07,286 | INFO     | will attempt to kill all subprocesses of pid=26422
[2025-12-15 07:47:59] 2025-12-15 12:47:07,379 | INFO     | process IDs to be killed: [26422] (in reverse order)
[2025-12-15 07:47:59] 2025-12-15 12:47:07,434 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 07:47:59] 2025-12-15 12:47:07,434 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 07:47:59] 2025-12-15 12:47:07,436 | INFO     | did not find any defunct processes belonging to 26422
[2025-12-15 07:47:59] 2025-12-15 12:47:07,438 | INFO     | did not find any defunct processes belonging to 26422
[2025-12-15 07:47:59] 2025-12-15 12:47:07,438 | INFO     | ready for new job
[2025-12-15 07:47:59] 2025-12-15 12:47:07,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 07:47:59] 2025-12-15 12:47:07,440 | INFO     | ***************************************
[2025-12-15 07:47:59] 2025-12-15 12:47:07,440 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 07:47:59] 2025-12-15 12:47:07,440 | INFO     | ***************************************
[2025-12-15 07:47:59] 2025-12-15 12:47:07,440 | INFO     | 
[2025-12-15 07:47:59] 2025-12-15 12:47:07,441 | INFO     | architecture information:
[2025-12-15 07:47:59] 2025-12-15 12:47:07,441 | INFO     | executing command: cat /etc/os-release
[2025-12-15 07:47:59] 2025-12-15 12:47:07,455 | INFO     | cat /etc/os-release:
[2025-12-15 07:47:59] NAME="CentOS Linux"
[2025-12-15 07:47:59] VERSION="7 (Core)"
[2025-12-15 07:47:59] ID="centos"
[2025-12-15 07:47:59] ID_LIKE="rhel fedora"
[2025-12-15 07:47:59] VERSION_ID="7"
[2025-12-15 07:47:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 07:47:59] ANSI_COLOR="0;31"
[2025-12-15 07:47:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 07:47:59] HOME_URL="https://www.centos.org/"
[2025-12-15 07:47:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 07:47:59] 
[2025-12-15 07:47:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 07:47:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 07:47:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 07:47:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 07:47:59] 
[2025-12-15 07:47:59] 2025-12-15 12:47:07,456 | INFO     | ***************************************
[2025-12-15 07:47:59] 2025-12-15 12:47:07,959 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-15 07:47:59] 2025-12-15 12:47:07,974 | INFO     | sufficient remaining disk space (29319233536 B)
[2025-12-15 07:47:59] 2025-12-15 12:47:07,975 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 07:47:59] 2025-12-15 12:47:07,975 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 07:47:59] 2025-12-15 12:47:07,975 | INFO     | update_server=False
[2025-12-15 07:47:59] 2025-12-15 12:47:07,975 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 07:47:59] 2025-12-15 12:47:07,975 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 07:47:59] 2025-12-15 12:47:07,976 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 07:47:59] 2025-12-15 12:47:07,976 | INFO     | aborting loop
[2025-12-15 07:47:59] 2025-12-15 12:47:08,500 | INFO     | all payload control threads have been joined
[2025-12-15 07:47:59] 2025-12-15 12:47:08,642 | INFO     | all job control threads have been joined
[2025-12-15 07:47:59] 2025-12-15 12:47:08,818 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 07:47:59] 2025-12-15 12:47:08,981 | INFO     | [job] retrieve thread has finished
[2025-12-15 07:47:59] 2025-12-15 12:47:08,981 | INFO     | [job] queue monitor thread has finished
[2025-12-15 07:47:59] 2025-12-15 12:47:08,982 | INFO     | [job] job monitor thread has finished
[2025-12-15 07:47:59] 2025-12-15 12:47:09,054 | INFO     | all data control threads have been joined
[2025-12-15 07:47:59] 2025-12-15 12:47:09,076 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 07:47:59] 2025-12-15 12:47:09,077 | INFO     | [payload] validate_post thread has finished
[2025-12-15 07:47:59] 2025-12-15 12:47:09,235 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 07:47:59] 2025-12-15 12:47:09,314 | INFO     | [payload] failed_post thread has finished
[2025-12-15 07:47:59] 2025-12-15 12:47:09,387 | INFO     | [data] copytool_in thread has finished
[2025-12-15 07:47:59] 2025-12-15 12:47:09,505 | INFO     | [payload] control thread has finished
[2025-12-15 07:47:59] 2025-12-15 12:47:09,648 | INFO     | [job] control thread has finished
[2025-12-15 07:47:59] 2025-12-15 12:47:09,798 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 07:47:59] 2025-12-15 12:47:09,839 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 07:47:59] 2025-12-15 12:47:10,060 | INFO     | [data] control thread has finished
[2025-12-15 07:47:59] 2025-12-15 12:47:10,188 | INFO     | [job] validate thread has finished
[2025-12-15 07:47:59] 2025-12-15 12:47:10,460 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 07:47:59] 2025-12-15 12:47:10,823 | INFO     | [data] copytool_out thread has finished
[2025-12-15 07:47:59] 2025-12-15 12:47:13,841 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 07:47:59] 2025-12-15 12:47:37,841 | INFO     | PID=19977 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-15 07:47:59] 2025-12-15 12:47:37,841 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 07:47:59] 2025-12-15 12:47:37,842 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 07:47:59] 2025-12-15 12:47:37,842 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 07:47:59] 2025-12-15 12:47:53,940 | INFO     | [monitor] cgroup control has ended
[2025-12-15 07:47:59] 2025-12-15 12:47:54,323 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140024899548992)>', '<ExcThread(monitor, started 140024672560896)>']
[2025-12-15 07:47:59] 2025-12-15 12:47:54,924 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 07:47:59] 2025-12-15 12:47:54,925 | INFO     | [monitor] control thread has ended
[2025-12-15 07:47:59] 2025-12-15 12:47:59,348 | INFO     | all workflow threads have been joined
[2025-12-15 07:47:59] 2025-12-15 12:47:59,348 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 07:47:59] 2025-12-15 12:47:59,355 | INFO     | traces error code: 0
[2025-12-15 07:47:59] 2025-12-15 12:47:59,358 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 07:47:59] 2025-12-15 12:47:59,449 [wrapper] ==== pilot stdout END ====
[2025-12-15 07:47:59] 2025-12-15 12:47:59,452 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 07:47:59] 2025-12-15 12:47:59,456 [wrapper] pilotpid: 19977
[2025-12-15 07:47:59] 2025-12-15 12:47:59,460 [wrapper] Pilot exit status: 0
[2025-12-15 07:47:59] 2025-12-15 12:47:59,476 [wrapper] pandaids: 6929524763
[2025-12-15 07:47:59] 2025-12-15 12:47:59,518 [wrapper] cleanup supervisor_pilot 25528 19978
[2025-12-15 07:47:59] 2025-12-15 12:47:59,522 [wrapper] Test setup, not cleaning
[2025-12-15 07:47:59] 2025-12-15 12:47:59,525 [wrapper] apfmon messages muted
[2025-12-15 07:47:59] 2025-12-15 12:47:59,529 [wrapper] ==== wrapper stdout END ====
[2025-12-15 07:47:59] 2025-12-15 12:47:59,533 [wrapper] ==== wrapper stderr END ====
[2025-12-15 07:47:59]  *** Error codes and diagnostics ***
[2025-12-15 07:47:59]     "exeErrorCode": 0,
[2025-12-15 07:47:59]     "exeErrorDiag": "",
[2025-12-15 07:47:59]     "pilotErrorCode": 0,
[2025-12-15 07:47:59]     "pilotErrorDiag": "",
[2025-12-15 07:47:59]  *** Listing of results directory ***
[2025-12-15 07:47:59] total 440604
[2025-12-15 07:47:59] -rwx------ 1 boincer umatlas     36322 Dec 15 00:28 runpilot2-wrapper.sh
[2025-12-15 07:47:59] -rw-r--r-- 1 boincer umatlas      5112 Dec 15 00:30 queuedata.json
[2025-12-15 07:47:59] -rw-r--r-- 1 boincer umatlas    579449 Dec 15 00:30 pilot3.tar.gz
[2025-12-15 07:47:59] -rw-r--r-- 1 boincer umatlas       100 Dec 15 06:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 07:47:59] -rwxr-xr-x 1 boincer umatlas      7986 Dec 15 06:03 run_atlas
[2025-12-15 07:47:59] -rw-r--r-- 1 boincer umatlas       105 Dec 15 06:03 job.xml
[2025-12-15 07:47:59] -rw-r--r-- 2 boincer umatlas 223237198 Dec 15 06:03 EVNT.47898761._000605.pool.root.1
[2025-12-15 07:47:59] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 06:03 start_atlas.sh
[2025-12-15 07:47:59] drwxrwx--x 2 boincer umatlas      4096 Dec 15 06:03 shared
[2025-12-15 07:47:59] -rw-r--r-- 2 boincer umatlas    592405 Dec 15 06:03 input.tar.gz
[2025-12-15 07:47:59] -rw-r--r-- 1 boincer umatlas         0 Dec 15 06:03 boinc_lockfile
[2025-12-15 07:47:59] -rw-r--r-- 1 boincer umatlas      2508 Dec 15 06:03 pandaJob.out
[2025-12-15 07:47:59] -rw------- 1 boincer umatlas        57 Dec 15 06:03 setup.sh.local
[2025-12-15 07:47:59] -rw------- 1 boincer umatlas    990996 Dec 15 06:03 agis_schedconf.cvmfs.json
[2025-12-15 07:47:59] -rw------- 1 boincer umatlas   1516240 Dec 15 06:03 agis_ddmendpoints.agis.ALL.json
[2025-12-15 07:47:59] drwx------ 5 boincer umatlas      4096 Dec 15 06:03 pilot3
[2025-12-15 07:47:59] -rw-r--r-- 1 boincer umatlas      5951 Dec 15 07:45 init_data.xml
[2025-12-15 07:47:59] -rw------- 1 boincer umatlas 221460650 Dec 15 07:46 HITS.47898763._013866.pool.root.1
[2025-12-15 07:47:59] -rw-r--r-- 1 boincer umatlas       529 Dec 15 07:46 boinc_task_state.xml
[2025-12-15 07:47:59] -rw------- 1 boincer umatlas      1045 Dec 15 07:46 memory_monitor_summary.json
[2025-12-15 07:47:59] -rw------- 1 boincer umatlas    400746 Dec 15 07:46 log.47898763._013866.job.log.tgz.1
[2025-12-15 07:47:59] -rw------- 1 boincer umatlas        95 Dec 15 07:47 pilot_heartbeat.json
[2025-12-15 07:47:59] -rw------- 1 boincer umatlas      7844 Dec 15 07:47 heartbeat.json
[2025-12-15 07:47:59] -rw-r--r-- 1 boincer umatlas      8192 Dec 15 07:47 boinc_mmap_file
[2025-12-15 07:47:59] -rw-r--r-- 1 boincer umatlas        27 Dec 15 07:47 wrapper_checkpoint.txt
[2025-12-15 07:47:59] -rw------- 1 boincer umatlas      4746 Dec 15 07:47 pilotlog.txt
[2025-12-15 07:47:59] -rw------- 1 boincer umatlas    881833 Dec 15 07:47 log.47898763._013866.job.log.1
[2025-12-15 07:47:59] -rw------- 1 boincer umatlas       357 Dec 15 07:47 output.list
[2025-12-15 07:47:59] -rw-r--r-- 1 boincer umatlas       620 Dec 15 07:47 runtime_log
[2025-12-15 07:47:59] -rw------- 1 boincer umatlas   1300480 Dec 15 07:47 result.tar.gz
[2025-12-15 07:47:59] -rw-r--r-- 1 boincer umatlas      9339 Dec 15 07:47 runtime_log.err
[2025-12-15 07:47:59] -rw------- 1 boincer umatlas       658 Dec 15 07:47 K40NDmjJGp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYNXKDmmWKXym.diag
[2025-12-15 07:47:59] -rw-r--r-- 1 boincer umatlas     20903 Dec 15 07:47 stderr.txt
[2025-12-15 07:47:59] HITS file was successfully produced:
[2025-12-15 07:47:59] -rw------- 1 boincer umatlas 221460650 Dec 15 07:46 shared/HITS.pool.root.1
[2025-12-15 07:47:59]  *** Contents of shared directory: ***
[2025-12-15 07:47:59] total 436152
[2025-12-15 07:47:59] -rw-r--r-- 2 boincer umatlas 223237198 Dec 15 06:03 ATLAS.root_0
[2025-12-15 07:47:59] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 06:03 start_atlas.sh
[2025-12-15 07:47:59] -rw-r--r-- 2 boincer umatlas    592405 Dec 15 06:03 input.tar.gz
[2025-12-15 07:47:59] -rw------- 1 boincer umatlas 221460650 Dec 15 07:46 HITS.pool.root.1
[2025-12-15 07:47:59] -rw------- 1 boincer umatlas   1300480 Dec 15 07:47 result.tar.gz
07:48:01 (16298): run_atlas exited; CPU time 67128.187705
07:48:01 (16298): called boinc_finish(0)

</stderr_txt>
]]>

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