Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:11:00 (9458): wrapper (7.7.26015): starting
05:11:00 (9458): wrapper: running run_atlas (--nthreads 8)
[2025-12-15 05:11:00] Arguments: --nthreads 8
[2025-12-15 05:11:00] Threads: 8
[2025-12-15 05:11:00] Checking for CVMFS
[2025-12-15 05:11:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 05:11:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 05:11:00] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 05:11:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 05:11:00] 2.11.2.0 2934 204046 81196 154027 1 56 11304981 20275201 1 130560 1 74557581 99.940 9871804 24437 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-15 05:11:00] CVMFS is ok
[2025-12-15 05:11:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 05:11:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 05:11:00] Further information can be found at the LHC@home message board.
[2025-12-15 05:11:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 05:11:00] Checking for apptainer binary...
[2025-12-15 05:11:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 05:11:00] Running /usr/bin/apptainer --version
[2025-12-15 05:11:00] apptainer version 1.3.2-1.el7
[2025-12-15 05:11:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 05:11:02] c-204-33.aglt2.org
[2025-12-15 05:11:02] apptainer works
[2025-12-15 05:11:02] Set ATHENA_PROC_NUMBER=8
[2025-12-15 05:11:02] Set ATHENA_CORE_NUMBER=8
[2025-12-15 05:11:02] Starting ATLAS job with PandaID=6929524751
[2025-12-15 05:11:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:48:26 (24675): wrapper (7.7.26015): starting
07:48:26 (24675): wrapper: running run_atlas (--nthreads 8)
[2025-12-15 07:48:26] Arguments: --nthreads 8
[2025-12-15 07:48:26] Threads: 8
[2025-12-15 07:48:26] This job has been restarted, cleaning up previous attempt
[2025-12-15 07:48:26] Checking for CVMFS
[2025-12-15 07:48:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 07:48:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 07:48:27] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 07:48:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 07:48:27] 2.11.2.0 2934 204204 81812 154033 1 1 11471820 20275200 1 130560 1 74641399 99.940 9878670 24443 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-15 07:48:27] CVMFS is ok
[2025-12-15 07:48:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 07:48:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 07:48:27] Further information can be found at the LHC@home message board.
[2025-12-15 07:48:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 07:48:27] Checking for apptainer binary...
[2025-12-15 07:48:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 07:48:27] Running /usr/bin/apptainer --version
[2025-12-15 07:48:27] apptainer version 1.3.2-1.el7
[2025-12-15 07:48:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 07:48:28] c-204-33.aglt2.org
[2025-12-15 07:48:28] apptainer works
[2025-12-15 07:48:28] Set ATHENA_PROC_NUMBER=8
[2025-12-15 07:48:28] Set ATHENA_CORE_NUMBER=8
[2025-12-15 07:48:28] Starting ATLAS job with PandaID=6929524751
[2025-12-15 07:48:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 10:56:10]  *** The last 200 lines of the pilot log: ***
[2025-12-15 10:56:10] 2025-12-15 15:54:59,380 | INFO     | executing command: lscpu
[2025-12-15 10:56:10] 2025-12-15 15:54:59,410 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-15 10:56:10] 2025-12-15 15:55:00,967 | INFO     | time since job start (11174s) is within the limit (174528.0s)
[2025-12-15 10:56:10] 2025-12-15 15:55:01,650 | INFO     | monitor loop #818: job 0:6929524751 is in state 'finished'
[2025-12-15 10:56:10] 2025-12-15 15:55:01,650 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 10:56:10] 2025-12-15 15:55:02,104 | INFO     | PID=29463 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-15 10:56:10] 2025-12-15 15:55:03,104 | INFO     | time since job start (11177s) is within the limit (174528.0s)
[2025-12-15 10:56:10] 2025-12-15 15:55:04,153 | INFO     | monitor loop #819: job 0:6929524751 is in state 'finished'
[2025-12-15 10:56:10] 2025-12-15 15:55:04,153 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 10:56:10] 2025-12-15 15:55:04,899 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-15 10:56:10] 2025-12-15 15:55:04,902 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-12-15 10:56:10] 2025-12-15 15:55:04,905 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929524751/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 10:56:10] 2025-12-15 15:55:04,905 | INFO     | extracted standard info from prmon json
[2025-12-15 10:56:10] 2025-12-15 15:55:04,906 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 10:56:10] 2025-12-15 15:55:04,906 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 10:56:10] 2025-12-15 15:55:04,906 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 10:56:10] 2025-12-15 15:55:04,907 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 10:56:10] 2025-12-15 15:55:04,911 | INFO     | fitting pss+swap vs Time
[2025-12-15 10:56:10] 2025-12-15 15:55:04,911 | INFO     | sum of square deviations: 1900270052.9508126
[2025-12-15 10:56:10] 2025-12-15 15:55:04,912 | INFO     | sum of deviations: 14059924538.90164
[2025-12-15 10:56:10] 2025-12-15 15:55:04,912 | INFO     | mean x: 1765808508.0163934
[2025-12-15 10:56:10] 2025-12-15 15:55:04,913 | INFO     | mean y: 2501724.3661202188
[2025-12-15 10:56:10] 2025-12-15 15:55:04,913 | INFO     | intersect: -13062554126.147575
[2025-12-15 10:56:10] 2025-12-15 15:55:04,913 | INFO     | chi2: 1.495114802761548
[2025-12-15 10:56:10] 2025-12-15 15:55:04,914 | INFO     | sum of square deviations: 1748723940.449437
[2025-12-15 10:56:10] 2025-12-15 15:55:04,915 | INFO     | sum of deviations: 13522284631.921352
[2025-12-15 10:56:10] 2025-12-15 15:55:04,915 | INFO     | mean x: 1765808355.516854
[2025-12-15 10:56:10] 2025-12-15 15:55:04,915 | INFO     | mean y: 2501184.8595505618
[2025-12-15 10:56:10] 2025-12-15 15:55:04,915 | INFO     | intersect: -13651891390.441433
[2025-12-15 10:56:10] 2025-12-15 15:55:04,916 | INFO     | chi2: 1.4960833917321017
[2025-12-15 10:56:10] 2025-12-15 15:55:04,916 | INFO     | current chi2=1.4960833917321017 (change=-0.06478358509759326 %)
[2025-12-15 10:56:10] 2025-12-15 15:55:04,916 | INFO     | right removable region: 177
[2025-12-15 10:56:10] 2025-12-15 15:55:04,916 | INFO     | sum of square deviations: 1748722110.449437
[2025-12-15 10:56:10] 2025-12-15 15:55:04,917 | INFO     | sum of deviations: -12177831693.247198
[2025-12-15 10:56:10] 2025-12-15 15:55:04,917 | INFO     | mean x: 1765808660.516854
[2025-12-15 10:56:10] 2025-12-15 15:55:04,917 | INFO     | mean y: 2527778.415730337
[2025-12-15 10:56:10] 2025-12-15 15:55:04,918 | INFO     | intersect: 12299347577.14629
[2025-12-15 10:56:10] 2025-12-15 15:55:04,918 | INFO     | chi2: 0.12328833656194191
[2025-12-15 10:56:10] 2025-12-15 15:55:04,918 | INFO     | current chi2=0.12328833656194191 (change=91.75392175007414 %)
[2025-12-15 10:56:10] 2025-12-15 15:55:04,918 | INFO     | sum of square deviations: 1605453392.9479809
[2025-12-15 10:56:10] 2025-12-15 15:55:04,919 | INFO     | sum of deviations: -13595665515.04624
[2025-12-15 10:56:10] 2025-12-15 15:55:04,919 | INFO     | mean x: 1765808813.0173411
[2025-12-15 10:56:10] 2025-12-15 15:55:04,920 | INFO     | mean y: 2529250.682080925
[2025-12-15 10:56:10] 2025-12-15 15:55:04,920 | INFO     | intersect: 14956153000.058949
[2025-12-15 10:56:10] 2025-12-15 15:55:04,920 | INFO     | chi2: 0.10644539811609635
[2025-12-15 10:56:10] 2025-12-15 15:55:04,920 | INFO     | current chi2=0.10644539811609635 (change=13.661420792536536 %)
[2025-12-15 10:56:10] 2025-12-15 15:55:04,920 | INFO     | left removable region: 20
[2025-12-15 10:56:10] 2025-12-15 15:55:04,920 | INFO     | sum of square deviations: 1199943688.9936268
[2025-12-15 10:56:10] 2025-12-15 15:55:04,921 | INFO     | sum of deviations: -2706797386.694267
[2025-12-15 10:56:10] 2025-12-15 15:55:04,921 | INFO     | mean x: 1765808935.0063694
[2025-12-15 10:56:10] 2025-12-15 15:55:04,922 | INFO     | mean y: 2516267.694267516
[2025-12-15 10:56:10] 2025-12-15 15:55:04,922 | INFO     | intersect: 3985775694.3805923
[2025-12-15 10:56:10] 2025-12-15 15:55:04,922 | INFO     | chi2: 0.05364698083588647
[2025-12-15 10:56:10] 2025-12-15 15:55:04,922 | INFO     | current memory leak: -2.26 B/s (using 157 data points, chi2=0.05)
[2025-12-15 10:56:10] 2025-12-15 15:55:04,922 | INFO     | could have reported an average CPU frequency of 2022 MHz (10 samples)
[2025-12-15 10:56:10] 2025-12-15 15:55:04,923 | INFO     | ..............................
[2025-12-15 10:56:10] 2025-12-15 15:55:04,923 | INFO     | . Timing measurements:
[2025-12-15 10:56:10] 2025-12-15 15:55:04,923 | INFO     | . get job = 0 s
[2025-12-15 10:56:10] 2025-12-15 15:55:04,923 | INFO     | . initial setup = 1 s
[2025-12-15 10:56:10] 2025-12-15 15:55:04,923 | INFO     | . payload setup = 8 s
[2025-12-15 10:56:10] 2025-12-15 15:55:04,923 | INFO     | . stage-in = 0 s
[2025-12-15 10:56:10] 2025-12-15 15:55:04,923 | INFO     | . payload execution = 11140 s
[2025-12-15 10:56:10] 2025-12-15 15:55:04,924 | INFO     | . stage-out = 2 s
[2025-12-15 10:56:10] 2025-12-15 15:55:04,924 | INFO     | . log creation = 0 s
[2025-12-15 10:56:10] 2025-12-15 15:55:04,924 | INFO     | ..............................
[2025-12-15 10:56:10] 2025-12-15 15:55:05,109 | INFO     | time since job start (11179s) is within the limit (174528.0s)
[2025-12-15 10:56:10] 2025-12-15 15:55:05,477 | INFO     | 
[2025-12-15 10:56:10] 2025-12-15 15:55:05,477 | INFO     | job summary report
[2025-12-15 10:56:10] 2025-12-15 15:55:05,477 | INFO     | --------------------------------------------------
[2025-12-15 10:56:10] 2025-12-15 15:55:05,477 | INFO     | PanDA job id: 6929524751
[2025-12-15 10:56:10] 2025-12-15 15:55:05,477 | INFO     | task id: 47898763
[2025-12-15 10:56:10] 2025-12-15 15:55:05,478 | INFO     | errors: (none)
[2025-12-15 10:56:10] 2025-12-15 15:55:05,478 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 10:56:10] 2025-12-15 15:55:05,478 | INFO     | pilot state: finished 
[2025-12-15 10:56:10] 2025-12-15 15:55:05,478 | INFO     | transexitcode: 0
[2025-12-15 10:56:10] 2025-12-15 15:55:05,478 | INFO     | exeerrorcode: 0
[2025-12-15 10:56:10] 2025-12-15 15:55:05,479 | INFO     | exeerrordiag: 
[2025-12-15 10:56:10] 2025-12-15 15:55:05,479 | INFO     | exitcode: 0
[2025-12-15 10:56:10] 2025-12-15 15:55:05,479 | INFO     | exitmsg: OK
[2025-12-15 10:56:10] 2025-12-15 15:55:05,479 | INFO     | cpuconsumptiontime: 79371 s
[2025-12-15 10:56:10] 2025-12-15 15:55:05,479 | INFO     | nevents: 400
[2025-12-15 10:56:10] 2025-12-15 15:55:05,479 | INFO     | neventsw: 0
[2025-12-15 10:56:10] 2025-12-15 15:55:05,480 | INFO     | pid: 3585
[2025-12-15 10:56:10] 2025-12-15 15:55:05,480 | INFO     | pgrp: 3585
[2025-12-15 10:56:10] 2025-12-15 15:55:05,480 | INFO     | corecount: 8
[2025-12-15 10:56:10] 2025-12-15 15:55:05,480 | INFO     | event service: False
[2025-12-15 10:56:10] 2025-12-15 15:55:05,480 | INFO     | sizes: {0: 2283130, 1: 2283986, 7: 2284248, 12: 2284276, 11153: 2313447, 11156: 2322657, 11162: 2322795}
[2025-12-15 10:56:10] 2025-12-15 15:55:05,480 | INFO     | --------------------------------------------------
[2025-12-15 10:56:10] 2025-12-15 15:55:05,481 | INFO     | 
[2025-12-15 10:56:10] 2025-12-15 15:55:05,481 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-15 10:56:10] 2025-12-15 15:55:05,510 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 10:56:10] 2025-12-15 15:55:05,511 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 10:56:10] 2025-12-15 15:55:05,511 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 10:56:10] 2025-12-15 15:55:05,511 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 10:56:10] 2025-12-15 15:55:05,511 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 10:56:10] 2025-12-15 15:55:05,512 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 10:56:10] 2025-12-15 15:55:05,512 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 10:56:10] 2025-12-15 15:55:05,512 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 10:56:10] 2025-12-15 15:55:05,512 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 10:56:10] 2025-12-15 15:55:05,512 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 10:56:10] 2025-12-15 15:55:05,512 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 10:56:10] 2025-12-15 15:55:05,513 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 10:56:10] 2025-12-15 15:55:05,513 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 10:56:10] 2025-12-15 15:55:05,513 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 10:56:10] 2025-12-15 15:55:05,513 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 10:56:10] 2025-12-15 15:55:05,513 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 10:56:10] 2025-12-15 15:55:05,514 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 10:56:10] 2025-12-15 15:55:05,514 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 10:56:10] 2025-12-15 15:55:05,514 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 10:56:10] 2025-12-15 15:55:05,514 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 10:56:10] 2025-12-15 15:55:05,514 | INFO     | job 6929524751 has completed (purged errors)
[2025-12-15 10:56:10] 2025-12-15 15:55:05,515 | INFO     | overall cleanup function is called
[2025-12-15 10:56:10] 2025-12-15 15:55:06,523 | INFO     | --- collectZombieJob: --- 10, [3585]
[2025-12-15 10:56:10] 2025-12-15 15:55:06,523 | INFO     | zombie collector waiting for pid 3585
[2025-12-15 10:56:10] 2025-12-15 15:55:06,523 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 10:56:10] 2025-12-15 15:55:06,524 | INFO     | collected zombie processes
[2025-12-15 10:56:10] 2025-12-15 15:55:06,524 | INFO     | will attempt to kill all subprocesses of pid=3585
[2025-12-15 10:56:10] 2025-12-15 15:55:06,613 | INFO     | process IDs to be killed: [3585] (in reverse order)
[2025-12-15 10:56:10] 2025-12-15 15:55:06,670 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 10:56:10] 2025-12-15 15:55:06,671 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 10:56:10] 2025-12-15 15:55:06,675 | INFO     | did not find any defunct processes belonging to 3585
[2025-12-15 10:56:10] 2025-12-15 15:55:06,678 | INFO     | did not find any defunct processes belonging to 3585
[2025-12-15 10:56:10] 2025-12-15 15:55:06,678 | INFO     | ready for new job
[2025-12-15 10:56:10] 2025-12-15 15:55:06,678 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 10:56:10] 2025-12-15 15:55:06,680 | INFO     | ***************************************
[2025-12-15 10:56:10] 2025-12-15 15:55:06,681 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 10:56:10] 2025-12-15 15:55:06,681 | INFO     | ***************************************
[2025-12-15 10:56:10] 2025-12-15 15:55:06,681 | INFO     | 
[2025-12-15 10:56:10] 2025-12-15 15:55:06,681 | INFO     | architecture information:
[2025-12-15 10:56:10] 2025-12-15 15:55:06,682 | INFO     | executing command: cat /etc/os-release
[2025-12-15 10:56:10] 2025-12-15 15:55:06,700 | INFO     | cat /etc/os-release:
[2025-12-15 10:56:10] NAME="CentOS Linux"
[2025-12-15 10:56:10] VERSION="7 (Core)"
[2025-12-15 10:56:10] ID="centos"
[2025-12-15 10:56:10] ID_LIKE="rhel fedora"
[2025-12-15 10:56:10] VERSION_ID="7"
[2025-12-15 10:56:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 10:56:10] ANSI_COLOR="0;31"
[2025-12-15 10:56:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 10:56:10] HOME_URL="https://www.centos.org/"
[2025-12-15 10:56:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 10:56:10] 
[2025-12-15 10:56:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 10:56:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 10:56:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 10:56:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 10:56:10] 
[2025-12-15 10:56:10] 2025-12-15 15:55:06,701 | INFO     | ***************************************
[2025-12-15 10:56:10] 2025-12-15 15:55:07,204 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-15 10:56:10] 2025-12-15 15:55:07,225 | INFO     | sufficient remaining disk space (18540920832 B)
[2025-12-15 10:56:10] 2025-12-15 15:55:07,225 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 10:56:10] 2025-12-15 15:55:07,225 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 10:56:10] 2025-12-15 15:55:07,225 | INFO     | update_server=False
[2025-12-15 10:56:10] 2025-12-15 15:55:07,226 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 10:56:10] 2025-12-15 15:55:07,226 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 10:56:10] 2025-12-15 15:55:07,610 | INFO     | all data control threads have been joined
[2025-12-15 10:56:10] 2025-12-15 15:55:07,662 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 10:56:10] 2025-12-15 15:55:07,662 | INFO     | aborting loop
[2025-12-15 10:56:10] 2025-12-15 15:55:08,008 | INFO     | all payload control threads have been joined
[2025-12-15 10:56:10] 2025-12-15 15:55:08,231 | INFO     | [job] retrieve thread has finished
[2025-12-15 10:56:10] 2025-12-15 15:55:08,495 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 10:56:10] 2025-12-15 15:55:08,530 | INFO     | [job] validate thread has finished
[2025-12-15 10:56:10] 2025-12-15 15:55:08,530 | INFO     | [data] copytool_in thread has finished
[2025-12-15 10:56:10] 2025-12-15 15:55:08,611 | INFO     | [data] control thread has finished
[2025-12-15 10:56:10] 2025-12-15 15:55:08,633 | INFO     | all job control threads have been joined
[2025-12-15 10:56:10] 2025-12-15 15:55:08,663 | INFO     | [job] job monitor thread has finished
[2025-12-15 10:56:10] 2025-12-15 15:55:09,011 | INFO     | [payload] control thread has finished
[2025-12-15 10:56:10] 2025-12-15 15:55:09,232 | INFO     | [data] copytool_out thread has finished
[2025-12-15 10:56:10] 2025-12-15 15:55:09,239 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 10:56:10] 2025-12-15 15:55:09,394 | INFO     | [payload] validate_post thread has finished
[2025-12-15 10:56:10] 2025-12-15 15:55:09,456 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 10:56:10] 2025-12-15 15:55:09,638 | INFO     | [job] control thread has finished
[2025-12-15 10:56:10] 2025-12-15 15:55:09,685 | INFO     | [payload] failed_post thread has finished
[2025-12-15 10:56:10] 2025-12-15 15:55:09,725 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 10:56:10] 2025-12-15 15:55:09,886 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 10:56:10] 2025-12-15 15:55:10,027 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 10:56:10] 2025-12-15 15:55:11,031 | INFO     | [job] queue monitor thread has finished
[2025-12-15 10:56:10] 2025-12-15 15:55:13,892 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 10:56:10] 2025-12-15 15:55:38,318 | INFO     | PID=29463 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-15 10:56:10] 2025-12-15 15:55:38,319 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 10:56:10] 2025-12-15 15:55:38,319 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 10:56:10] 2025-12-15 15:55:38,319 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 10:56:10] 2025-12-15 15:56:03,822 | INFO     | [monitor] cgroup control has ended
[2025-12-15 10:56:10] 2025-12-15 15:56:05,304 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139957475235648)>', '<ExcThread(monitor, started 139957163235072)>']
[2025-12-15 10:56:10] 2025-12-15 15:56:05,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 10:56:10] 2025-12-15 15:56:05,433 | INFO     | [monitor] control thread has ended
[2025-12-15 10:56:10] 2025-12-15 15:56:10,307 | INFO     | all workflow threads have been joined
[2025-12-15 10:56:10] 2025-12-15 15:56:10,307 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 10:56:10] 2025-12-15 15:56:10,308 | INFO     | traces error code: 0
[2025-12-15 10:56:10] 2025-12-15 15:56:10,308 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 10:56:10] 2025-12-15 15:56:10,420 [wrapper] ==== pilot stdout END ====
[2025-12-15 10:56:10] 2025-12-15 15:56:10,425 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 10:56:10] 2025-12-15 15:56:10,429 [wrapper] pilotpid: 29463
[2025-12-15 10:56:10] 2025-12-15 15:56:10,434 [wrapper] Pilot exit status: 0
[2025-12-15 10:56:10] 2025-12-15 15:56:10,452 [wrapper] pandaids: 6929524751 6929524751
[2025-12-15 10:56:10] 2025-12-15 15:56:10,504 [wrapper] cleanup supervisor_pilot  6372 29464
[2025-12-15 10:56:10] 2025-12-15 15:56:10,509 [wrapper] Test setup, not cleaning
[2025-12-15 10:56:10] 2025-12-15 15:56:10,513 [wrapper] apfmon messages muted
[2025-12-15 10:56:10] 2025-12-15 15:56:10,518 [wrapper] ==== wrapper stdout END ====
[2025-12-15 10:56:10] 2025-12-15 15:56:10,522 [wrapper] ==== wrapper stderr END ====
[2025-12-15 10:56:10]  *** Error codes and diagnostics ***
[2025-12-15 10:56:10]     "exeErrorCode": 0,
[2025-12-15 10:56:10]     "exeErrorDiag": "",
[2025-12-15 10:56:10]     "pilotErrorCode": 0,
[2025-12-15 10:56:10]     "pilotErrorDiag": "",
[2025-12-15 10:56:10]  *** Listing of results directory ***
[2025-12-15 10:56:10] total 661588
[2025-12-15 10:56:10] drwx------ 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2025-12-15 10:56:10] -rw-r--r-- 1 boincer umatlas    579449 Dec 15 00:25 pilot3.tar.gz
[2025-12-15 10:56:10] -rw-r--r-- 1 boincer umatlas      5112 Dec 15 00:25 queuedata.json
[2025-12-15 10:56:10] -rwx------ 1 boincer umatlas     36322 Dec 15 00:25 runpilot2-wrapper.sh
[2025-12-15 10:56:10] -rw-r--r-- 1 boincer umatlas       100 Dec 15 05:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 10:56:10] -rwxr-xr-x 1 boincer umatlas      7986 Dec 15 05:10 run_atlas
[2025-12-15 10:56:10] -rw-r--r-- 1 boincer umatlas       105 Dec 15 05:10 job.xml
[2025-12-15 10:56:10] -rw-r--r-- 3 boincer umatlas 225568459 Dec 15 05:11 EVNT.47898761._000604.pool.root.1
[2025-12-15 10:56:10] -rw-r--r-- 3 boincer umatlas 225568459 Dec 15 05:11 ATLAS.root_0
[2025-12-15 10:56:10] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 05:11 start_atlas.sh
[2025-12-15 10:56:10] drwxrwx--x 2 boincer umatlas      4096 Dec 15 05:11 shared
[2025-12-15 10:56:10] -rw-r--r-- 2 boincer umatlas    592399 Dec 15 05:11 input.tar.gz
[2025-12-15 10:56:10] -rw-r--r-- 1 boincer umatlas         0 Dec 15 05:11 boinc_lockfile
[2025-12-15 10:56:10] -rw-r--r-- 1 boincer umatlas      2508 Dec 15 07:48 pandaJob.out
[2025-12-15 10:56:10] -rw------- 1 boincer umatlas        57 Dec 15 07:48 setup.sh.local
[2025-12-15 10:56:10] -rw------- 1 boincer umatlas    991012 Dec 15 07:48 agis_schedconf.cvmfs.json
[2025-12-15 10:56:10] -rw------- 1 boincer umatlas 218446876 Dec 15 10:54 HITS.47898763._013854.pool.root.1
[2025-12-15 10:56:10] -rw-r--r-- 1 boincer umatlas       532 Dec 15 10:54 boinc_task_state.xml
[2025-12-15 10:56:10] -rw------- 1 boincer umatlas      1052 Dec 15 10:54 memory_monitor_summary.json
[2025-12-15 10:56:10] -rw------- 1 boincer umatlas   1516240 Dec 15 10:54 agis_ddmendpoints.agis.ALL.json
[2025-12-15 10:56:10] -rw------- 1 boincer umatlas    430137 Dec 15 10:54 log.47898763._013854.job.log.tgz.1
[2025-12-15 10:56:10] -rw------- 1 boincer umatlas      7846 Dec 15 10:55 heartbeat.json
[2025-12-15 10:56:10] -rw------- 1 boincer umatlas        96 Dec 15 10:55 pilot_heartbeat.json
[2025-12-15 10:56:10] -rw-r--r-- 1 boincer umatlas      5912 Dec 15 10:55 init_data.xml
[2025-12-15 10:56:10] -rw-r--r-- 1 boincer umatlas      8192 Dec 15 10:55 boinc_mmap_file
[2025-12-15 10:56:10] -rw-r--r-- 1 boincer umatlas        29 Dec 15 10:55 wrapper_checkpoint.txt
[2025-12-15 10:56:10] -rw------- 1 boincer umatlas      4746 Dec 15 10:56 pilotlog.txt
[2025-12-15 10:56:10] -rw------- 1 boincer umatlas   1545966 Dec 15 10:56 log.47898763._013854.job.log.1
[2025-12-15 10:56:10] -rw------- 1 boincer umatlas       357 Dec 15 10:56 output.list
[2025-12-15 10:56:10] -rw-r--r-- 1 boincer umatlas       620 Dec 15 10:56 runtime_log
[2025-12-15 10:56:10] -rw------- 1 boincer umatlas   1996800 Dec 15 10:56 result.tar.gz
[2025-12-15 10:56:10] -rw------- 1 boincer umatlas       788 Dec 15 10:56 yaZNDmbGGp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAEXKDmn1xgMo.diag
[2025-12-15 10:56:10] -rw-r--r-- 1 boincer umatlas      9428 Dec 15 10:56 runtime_log.err
[2025-12-15 10:56:10] -rw-r--r-- 1 boincer umatlas     23673 Dec 15 10:56 stderr.txt
[2025-12-15 10:56:10] HITS file was successfully produced:
[2025-12-15 10:56:10] -rw------- 1 boincer umatlas 218446876 Dec 15 10:54 shared/HITS.pool.root.1
[2025-12-15 10:56:10]  *** Contents of shared directory: ***
[2025-12-15 10:56:10] total 436168
[2025-12-15 10:56:10] -rw-r--r-- 3 boincer umatlas 225568459 Dec 15 05:11 ATLAS.root_0
[2025-12-15 10:56:10] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 05:11 start_atlas.sh
[2025-12-15 10:56:10] -rw-r--r-- 2 boincer umatlas    592399 Dec 15 05:11 input.tar.gz
[2025-12-15 10:56:10] -rw------- 1 boincer umatlas 218446876 Dec 15 10:54 HITS.pool.root.1
[2025-12-15 10:56:10] -rw------- 1 boincer umatlas   1996800 Dec 15 10:56 result.tar.gz
10:56:12 (24675): run_atlas exited; CPU time 79272.682972
10:56:12 (24675): called boinc_finish(0)

</stderr_txt>
]]>

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