Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-16 01:55:53 (7972): vboxwrapper version 26210
2025-12-16 01:55:53 (7972): BOINC client version: 8.2.8
2025-12-16 01:55:55 (7972): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-12-16 01:55:55 (7972): Successfully copied 'init_data.xml' to the shared directory.
2025-12-16 01:55:55 (7972): Create VM. (boinc_044a53dadf002df9, slot#0)
2025-12-16 01:55:56 (7972): Setting Memory Size for VM. (4300MB)
2025-12-16 01:55:56 (7972): Setting CPU Count for VM. (3)
2025-12-16 01:55:56 (7972): Setting Chipset Options for VM.
2025-12-16 01:55:57 (7972): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-16 01:55:57 (7972): Setting Boot Options for VM.
2025-12-16 01:55:57 (7972): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-16 01:55:58 (7972): Enabling VM Network Access.
2025-12-16 01:55:58 (7972): Disabling USB Support for VM.
2025-12-16 01:55:58 (7972): Disabling COM Port Support for VM.
2025-12-16 01:55:58 (7972): Disabling LPT Port Support for VM.
2025-12-16 01:55:59 (7972): Disabling Audio Support for VM.
2025-12-16 01:55:59 (7972): Disabling Clipboard Support for VM.
2025-12-16 01:55:59 (7972): Disabling Drag and Drop Support for VM.
2025-12-16 01:55:59 (7972): Adding storage controller(s) to VM.
2025-12-16 01:56:00 (7972): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-16 01:56:02 (7972): Adding VirtualBox Guest Additions to VM.
2025-12-16 01:56:02 (7972): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-16 01:56:02 (7972): forwarding host port 50146 to guest port 80
2025-12-16 01:56:03 (7972): Enabling remote desktop for VM.
2025-12-16 01:56:03 (7972): Enabling shared directory for VM.
2025-12-16 01:56:04 (7972): Starting VM using VBoxManage interface. (boinc_044a53dadf002df9, slot#0)
2025-12-16 01:56:13 (7972): Successfully started VM. (PID = '348')
2025-12-16 01:56:13 (7972): Reporting VM Process ID to BOINC.
2025-12-16 01:56:13 (7972): Guest Log: BIOS: VirtualBox 7.1.6
2025-12-16 01:56:13 (7972): Guest Log: CPUID EDX: 0x178bfbff
2025-12-16 01:56:13 (7972): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-16 01:56:13 (7972): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-16 01:56:13 (7972): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-16 01:56:13 (7972): Detected: Web Application Enabled (http://localhost:50146)
2025-12-16 01:56:13 (7972): Detected: Remote Desktop Enabled (localhost:50147)
2025-12-16 01:56:13 (7972): Preference change detected
2025-12-16 01:56:13 (7972): Setting CPU throttle for VM. (100%)
2025-12-16 01:56:13 (7972): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-16 01:56:15 (7972): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-16 01:56:15 (7972): Guest Log: BIOS: Booting from Hard Disk...
2025-12-16 01:56:19 (7972): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-16 01:56:19 (7972): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-16 01:56:19 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-16 01:56:28 (7972): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-16 01:56:28 (7972): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-12-16 01:56:44 (7972): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-16 01:56:44 (7972): Guest Log: 00:00:00.000565 main     Log opened 2025-12-16T01:56:42.686622000Z
2025-12-16 01:56:44 (7972): Guest Log: 00:00:00.000747 main     OS Product: Linux
2025-12-16 01:56:44 (7972): Guest Log: 00:00:00.000823 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-16 01:56:44 (7972): Guest Log: 00:00:00.000942 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-16 01:56:44 (7972): Guest Log: 00:00:00.001010 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-16 01:56:44 (7972): Guest Log: 00:00:00.001013 main     Process ID: 1298
2025-12-16 01:56:44 (7972): Guest Log: 00:00:00.001015 main     Package type: LINUX_64BITS_GENERIC
2025-12-16 01:56:44 (7972): Guest Log: 00:00:00.003853 main     5.2.32 r132073 started. Verbose level = 0
2025-12-16 01:56:45 (7972): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-16 01:56:45 (7972): Guest Log: [INFO] Mounting shared directory
2025-12-16 01:56:45 (7972): Guest Log: [INFO] Checking for init_data.xml
2025-12-16 01:56:54 (7972): Guest Log: 00:00:10.007612 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 580 857 000ns (GuestNow=1 765 846 614 112 379 000 ns GuestLast=1 765 850 202 693 236 000 ns fSetTimeLastLoop=true )
2025-12-16 01:56:55 (7972): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-16 01:56:55 (7972): Guest Log: [INFO] Detected branch: prod
2025-12-16 01:56:55 (7972): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-16 01:56:55 (7972): Guest Log: Copying input files
2025-12-16 01:56:57 (7972): Guest Log: Copied input files into RunAtlas.
2025-12-16 01:56:57 (7972): Guest Log: Detected user-configured HTTP proxy at http://10.10.35.150:3128 - will set in /etc/cvmfs/default.local
2025-12-16 01:57:06 (7972): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-16 01:57:07 (7972): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-16 01:57:07 (7972): Guest Log: 2.6.3.0 1577 0 31648 154052 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.10.35.150:3128 1
2025-12-16 01:57:08 (7972): Guest Log: copied the webapp to /var/www
2025-12-16 01:57:08 (7972): Guest Log: ATHENA_PROC_NUMBER=3
2025-12-16 01:57:08 (7972): Guest Log: ATHENA_CORE_NUMBER=3
2025-12-16 01:57:08 (7972): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-16 01:57:08 (7972): Guest Log:  *** Starting ATLAS job. (PandaID=6931297509 taskID=47899050) ***
2025-12-16 03:36:20 (7972): Status Report: Elapsed Time: '6000.000000'
2025-12-16 03:36:20 (7972): Status Report: CPU Time: '10204.890625'
2025-12-16 05:16:27 (7972): Status Report: Elapsed Time: '12000.000000'
2025-12-16 05:16:27 (7972): Status Report: CPU Time: '21718.531250'
2025-12-16 06:56:34 (7972): Status Report: Elapsed Time: '18000.000000'
2025-12-16 06:56:34 (7972): Status Report: CPU Time: '33229.343750'
2025-12-16 08:36:41 (7972): Status Report: Elapsed Time: '24000.000000'
2025-12-16 08:36:41 (7972): Status Report: CPU Time: '44727.015625'
2025-12-16 10:16:49 (7972): Status Report: Elapsed Time: '30000.000000'
2025-12-16 10:16:49 (7972): Status Report: CPU Time: '56232.578125'
2025-12-16 11:56:56 (7972): Status Report: Elapsed Time: '36000.000000'
2025-12-16 11:56:56 (7972): Status Report: CPU Time: '67757.078125'
2025-12-16 13:37:03 (7972): Status Report: Elapsed Time: '42000.000000'
2025-12-16 13:37:03 (7972): Status Report: CPU Time: '79244.359375'
2025-12-16 13:41:58 (7972): Guest Log:  *** Job finished ***
2025-12-16 13:41:58 (7972): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-16 13:41:58 (7972): Guest Log: 2025-12-16 12:41:37,305 | INFO     | all workflow threads have been joined
2025-12-16 13:41:58 (7972): Guest Log: 2025-12-16 12:41:37,306 | INFO     | end of generic workflow (traces error code: 0)
2025-12-16 13:41:58 (7972): Guest Log: 2025-12-16 12:41:37,306 | INFO     | traces error code: 0
2025-12-16 13:41:58 (7972): Guest Log: 2025-12-16 12:41:37,306 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-16 13:41:58 (7972): Guest Log: 2025-12-16 12:41:53,915 | INFO     | PID=5964 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-12-16 13:41:58 (7972): Guest Log: 2025-12-16 12:41:53,917 | INFO     | found 0 job(s) in 20 queues
2025-12-16 13:41:58 (7972): Guest Log: 2025-12-16 12:41:53,917 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-12-16 13:41:58 (7972): Guest Log: 2025-12-16 12:41:53,917 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-12-16 13:41:58 (7972): Guest Log: 2025-12-16 12:41:53,917 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-16 13:41:58 (7972): Guest Log: 2025-12-16 12:41:53,918 | INFO     | [monitor] control thread has ended
2025-12-16 13:41:58 (7972): Guest Log: 2025-12-16 12:41:54,080 [wrapper] ==== pilot stdout END ====
2025-12-16 13:41:58 (7972): Guest Log: 2025-12-16 12:41:54,087 [wrapper] ==== wrapper stdout RESUME ====
2025-12-16 13:41:58 (7972): Guest Log: 2025-12-16 12:41:54,094 [wrapper] pilotpid: 5964
2025-12-16 13:41:58 (7972): Guest Log: 2025-12-16 12:41:54,102 [wrapper] Pilot exit status: 0
2025-12-16 13:41:58 (7972): Guest Log: 2025-12-16 12:41:54,170 [wrapper] pandaids: 6931297509
2025-12-16 13:41:58 (7972): Guest Log: 2025-12-16 12:41:54,225 [wrapper] cleanup supervisor_pilot 25376 5965
2025-12-16 13:41:58 (7972): Guest Log: 2025-12-16 12:41:54,233 [wrapper] Test setup, not cleaning
2025-12-16 13:41:58 (7972): Guest Log: 2025-12-16 12:41:54,241 [wrapper] apfmon messages muted
2025-12-16 13:41:58 (7972): Guest Log: 2025-12-16 12:41:54,248 [wrapper] ==== wrapper stdout END ====
2025-12-16 13:41:58 (7972): Guest Log: 2025-12-16 12:41:54,256 [wrapper] ==== wrapper stderr END ====
2025-12-16 13:41:58 (7972): Guest Log:  *** Error codes and diagnostics ***
2025-12-16 13:41:58 (7972): Guest Log:     "exeErrorCode": 0,
2025-12-16 13:41:58 (7972): Guest Log:     "exeErrorDiag": "",
2025-12-16 13:41:58 (7972): Guest Log:     "pilotErrorCode": 0,
2025-12-16 13:41:58 (7972): Guest Log:     "pilotErrorDiag": "",
2025-12-16 13:41:58 (7972): Guest Log:  *** Listing of results directory ***
2025-12-16 13:41:58 (7972): Guest Log: total 200916
2025-12-16 13:41:58 (7972): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Dec 15 05:25 pilot3.tar.gz
2025-12-16 13:41:58 (7972): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Dec 15 05:25 queuedata.json
2025-12-16 13:41:58 (7972): Guest Log: -rwx------. 1 atlas atlas     36322 Dec 15 05:25 runpilot2-wrapper.sh
2025-12-16 13:41:58 (7972): Guest Log: -rwxr-xr-x. 1 atlas atlas      8391 Dec 16 00:56 init_data.xml
2025-12-16 13:41:58 (7972): Guest Log: -rwxr-xr-x. 1 atlas atlas    592382 Dec 16 00:56 input.tar.gz
2025-12-16 13:41:58 (7972): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Dec 16 00:56 start_atlas.sh
2025-12-16 13:41:58 (7972): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec 16 00:56 EVNT.47899048._000045.pool.root.1 -> /data/./ATLAS.root_0
2025-12-16 13:41:58 (7972): Guest Log: -rw-r--r--. 1 atlas atlas      2489 Dec 16 00:57 pandaJob.out
2025-12-16 13:41:58 (7972): Guest Log: -rw-------. 1 atlas atlas        49 Dec 16 00:57 setup.sh.local
2025-12-16 13:41:58 (7972): Guest Log: -rw-------. 1 atlas atlas    994539 Dec 16 00:57 agis_schedconf.cvmfs.json
2025-12-16 13:41:58 (7972): Guest Log: drwx------. 5 atlas atlas      4096 Dec 16 00:57 pilot3
2025-12-16 13:41:58 (7972): Guest Log: -rw-------. 1 atlas atlas 189149219 Dec 16 12:39 HITS.47899050._001120.pool.root.1
2025-12-16 13:41:58 (7972): Guest Log: -rw-------. 1 atlas atlas      1030 Dec 16 12:40 memory_monitor_summary.json
2025-12-16 13:41:58 (7972): Guest Log: -rw-------. 1 atlas atlas   1516240 Dec 16 12:41 agis_ddmendpoints.agis.ALL.json
2025-12-16 13:41:58 (7972): Guest Log: -rw-------. 1 atlas atlas    773356 Dec 16 12:41 log.47899050._001120.job.log.tgz.1
2025-12-16 13:41:58 (7972): Guest Log: -rw-------. 1 atlas atlas      7790 Dec 16 12:41 heartbeat.json
2025-12-16 13:41:58 (7972): Guest Log: -rw-------. 1 atlas atlas        95 Dec 16 12:41 pilot_heartbeat.json
2025-12-16 13:41:58 (7972): Guest Log: -rw-------. 1 atlas atlas       744 Dec 16 12:41 pilotlog.txt
2025-12-16 13:41:58 (7972): Guest Log: -rw-------. 1 atlas atlas   5592371 Dec 16 12:41 log.47899050._001120.job.log.1
2025-12-16 13:41:58 (7972): Guest Log: -rw-------. 1 atlas atlas       357 Dec 16 12:41 output.list
2025-12-16 13:41:58 (7972): Guest Log: -rw-r--r--. 1 atlas atlas       620 Dec 16 12:41 runtime_log
2025-12-16 13:41:58 (7972): Guest Log: -rw-------. 1 atlas atlas   6389760 Dec 16 12:41 result.tar.gz
2025-12-16 13:41:58 (7972): Guest Log: -rw-r--r--. 1 atlas atlas      9236 Dec 16 12:41 runtime_log.err
2025-12-16 13:41:58 (7972): Guest Log: -rw-------. 1 atlas atlas       666 Dec 16 12:41 iMBODmSGGp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkpSKDmMa1GGn.diag
2025-12-16 13:41:58 (7972): Guest Log: Looking for outputfile HITS.47899050._001120.pool.root.1
2025-12-16 13:41:58 (7972): Guest Log: HITS file was successfully produced
2025-12-16 13:41:58 (7972): Guest Log: -rw-------. 1 atlas atlas 189149219 Dec 16 12:39 /home/atlas/RunAtlas/HITS.47899050._001120.pool.root.1
2025-12-16 13:42:00 (7972): Guest Log: Successfully finished the ATLAS job!
2025-12-16 13:42:00 (7972): Guest Log: Copying the results back to the shared directory!
2025-12-16 13:42:00 (7972): Guest Log:  *** Contents of shared directory: ***
2025-12-16 13:42:00 (7972): Guest Log: total 387552
2025-12-16 13:42:00 (7972): Guest Log: -rwxrwxrwx. 1 root root 200686147 Dec 16 00:55 ATLAS.root_0
2025-12-16 13:42:00 (7972): Guest Log: -rwxrwxrwx. 1 root root 189149219 Dec 16 12:42 HITS.pool.root.1
2025-12-16 13:42:00 (7972): Guest Log: -rwxrwxrwx. 1 root root      8391 Dec 16 00:55 init_data.xml
2025-12-16 13:42:00 (7972): Guest Log: -rwxrwxrwx. 1 root root    592382 Dec 15 09:52 input.tar.gz
2025-12-16 13:42:00 (7972): Guest Log: -rwxrwxrwx. 1 root root   6389760 Dec 16 12:42 result.tar.gz
2025-12-16 13:42:00 (7972): Guest Log: -rwxrwxrwx. 1 root root     15847 Dec 15 09:52 start_atlas.sh
2025-12-16 13:42:00 (7972): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-16 13:42:00 (7972): VM Completion File Detected.
2025-12-16 13:42:00 (7972): Powering off VM.
2025-12-16 13:42:01 (7972): Successfully stopped VM.
2025-12-16 13:42:01 (7972): Deregistering VM. (boinc_044a53dadf002df9, slot#0)
2025-12-16 13:42:01 (7972): Removing network bandwidth throttle group from VM.
2025-12-16 13:42:02 (7972): Removing VM from VirtualBox.
2025-12-16 13:42:07 (7972): called boinc_finish(0)

</stderr_txt>
]]>

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