Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:39:44 (994): wrapper (7.7.26015): starting
03:39:44 (994): wrapper: running run_atlas (--nthreads 12)
[2025-12-15 03:39:44] Arguments: --nthreads 12
[2025-12-15 03:39:44] Threads: 12
[2025-12-15 03:39:44] Checking for CVMFS
[2025-12-15 03:39:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 03:39:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 03:39:44] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 03:39:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 03:39:44] 2.11.2.0 2937 314813 93420 154025 4 1 14220686 20275201 1 130560 1 139397589 99.966 18885689 15822 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-15 03:39:44] CVMFS is ok
[2025-12-15 03:39:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 03:39:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 03:39:44] Further information can be found at the LHC@home message board.
[2025-12-15 03:39:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 03:39:44] Checking for apptainer binary...
[2025-12-15 03:39:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 03:39:44] Running /usr/bin/apptainer --version
[2025-12-15 03:39:44] apptainer version 1.3.2-1.el7
[2025-12-15 03:39:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 03:39:46] c-205-8.aglt2.org
[2025-12-15 03:39:46] apptainer works
[2025-12-15 03:39:46] Set ATHENA_PROC_NUMBER=12
[2025-12-15 03:39:46] Set ATHENA_CORE_NUMBER=12
[2025-12-15 03:39:46] Starting ATLAS job with PandaID=6931296015
[2025-12-15 03:39:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 04:50:38]  *** The last 200 lines of the pilot log: ***
[2025-12-15 04:50:38]  mtime=0
[2025-12-15 04:50:38]  protocol_id=None
[2025-12-15 04:50:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-15 04:50:38]  replicas=None
[2025-12-15 04:50:38]  scope=mc23_13p6TeV
[2025-12-15 04:50:38]  status=None
[2025-12-15 04:50:38]  status_code=0
[2025-12-15 04:50:38]  storage_token=
[2025-12-15 04:50:38]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6931296015/log.47898878._003151.job.log.tgz.1
[2025-12-15 04:50:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/db/log.47898878._003151.job.log.tgz.1
[2025-12-15 04:50:38]  workdir=None
[2025-12-15 04:50:38] ]
[2025-12-15 04:50:38] 2025-12-15 09:49:57,599 | INFO     | transferring file log.47898878._003151.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6931296015/log.47898878._003151.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-15 04:50:38] 2025-12-15 09:49:57,600 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6931296015/log.47898878._003151.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898878._003151.job
[2025-12-15 04:50:38] 2025-12-15 09:49:57,622 | INFO     | adding to output.list: log.47898878._003151.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/db/log.47898878._003151.job.log.tg
[2025-12-15 04:50:38] 2025-12-15 09:49:57,623 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-15 04:50:38] 2025-12-15 09:49:57,623 | INFO     | summary of transferred files:
[2025-12-15 04:50:38] 2025-12-15 09:49:57,624 | INFO     |  -- lfn=log.47898878._003151.job.log.tgz.1, status_code=0, status=transferred
[2025-12-15 04:50:38] 2025-12-15 09:49:57,624 | INFO     | stage-out finished correctly
[2025-12-15 04:50:38] 2025-12-15 09:49:58,643 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-15 04:50:38] 2025-12-15 09:49:58,849 | INFO     | monitor loop #313: job 0:6931296015 is in state 'finished'
[2025-12-15 04:50:38] 2025-12-15 09:49:58,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 04:50:38] 2025-12-15 09:49:59,371 | INFO     | time since job start (4197s) is within the limit (174528.0s)
[2025-12-15 04:50:38] 2025-12-15 09:50:00,174 | INFO     | job 6931296015 has state=finished
[2025-12-15 04:50:38] 2025-12-15 09:50:00,174 | INFO     | preparing for final server update for job 6931296015 in state='finished'
[2025-12-15 04:50:38] 2025-12-15 09:50:00,175 | INFO     | this job has now completed (state=finished)
[2025-12-15 04:50:38] 2025-12-15 09:50:00,175 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-15 04:50:38] 2025-12-15 09:50:00,175 | INFO     | log transfer has been attempted: DONE
[2025-12-15 04:50:38] 2025-12-15 09:50:00,176 | INFO     | job 6931296015 has finished - writing final server update
[2025-12-15 04:50:38] 2025-12-15 09:50:00,176 | INFO     | total number of processed events: 400 (read)
[2025-12-15 04:50:38] 2025-12-15 09:50:00,177 | INFO     | executing command: lscpu
[2025-12-15 04:50:38] 2025-12-15 09:50:00,202 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-15 04:50:38] 2025-12-15 09:50:01,357 | INFO     | monitor loop #314: job 0:6931296015 is in state 'finished'
[2025-12-15 04:50:38] 2025-12-15 09:50:01,357 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 04:50:38] 2025-12-15 09:50:01,375 | INFO     | time since job start (4199s) is within the limit (174528.0s)
[2025-12-15 04:50:38] 2025-12-15 09:50:03,376 | INFO     | time since job start (4201s) is within the limit (174528.0s)
[2025-12-15 04:50:38] 2025-12-15 09:50:03,861 | INFO     | monitor loop #315: job 0:6931296015 is in state 'finished'
[2025-12-15 04:50:38] 2025-12-15 09:50:03,861 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 04:50:38] 2025-12-15 09:50:05,381 | INFO     | time since job start (4203s) is within the limit (174528.0s)
[2025-12-15 04:50:38] 2025-12-15 09:50:05,694 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-15 04:50:38] 2025-12-15 09:50:05,698 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1773.4166666666667
[2025-12-15 04:50:38] 2025-12-15 09:50:05,701 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6931296015/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 04:50:38] 2025-12-15 09:50:05,701 | INFO     | extracted standard info from prmon json
[2025-12-15 04:50:38] 2025-12-15 09:50:05,701 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 04:50:38] 2025-12-15 09:50:05,701 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 04:50:38] 2025-12-15 09:50:05,702 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 04:50:38] 2025-12-15 09:50:05,702 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 04:50:38] 2025-12-15 09:50:05,704 | INFO     | fitting pss+swap vs Time
[2025-12-15 04:50:38] 2025-12-15 09:50:05,704 | INFO     | sum of square deviations: 73882315.5
[2025-12-15 04:50:38] 2025-12-15 09:50:05,704 | INFO     | sum of deviations: -4400132184.5
[2025-12-15 04:50:38] 2025-12-15 09:50:05,705 | INFO     | mean x: 1765790196.5
[2025-12-15 04:50:38] 2025-12-15 09:50:05,705 | INFO     | mean y: 2880189.564516129
[2025-12-15 04:50:38] 2025-12-15 09:50:05,705 | INFO     | intersect: 105166209493.91245
[2025-12-15 04:50:38] 2025-12-15 09:50:05,705 | INFO     | chi2: 0.10222185440174007
[2025-12-15 04:50:38] 2025-12-15 09:50:05,705 | INFO     | current memory leak: -59.56 B/s (using 62 data points, chi2=0.10)
[2025-12-15 04:50:38] 2025-12-15 09:50:05,706 | INFO     | could have reported an average CPU frequency of 2052 MHz (6 samples)
[2025-12-15 04:50:38] 2025-12-15 09:50:05,706 | INFO     | ..............................
[2025-12-15 04:50:38] 2025-12-15 09:50:05,706 | INFO     | . Timing measurements:
[2025-12-15 04:50:38] 2025-12-15 09:50:05,706 | INFO     | . get job = 0 s
[2025-12-15 04:50:38] 2025-12-15 09:50:05,706 | INFO     | . initial setup = 2 s
[2025-12-15 04:50:38] 2025-12-15 09:50:05,706 | INFO     | . payload setup = 7 s
[2025-12-15 04:50:38] 2025-12-15 09:50:05,707 | INFO     | . stage-in = 0 s
[2025-12-15 04:50:38] 2025-12-15 09:50:05,707 | INFO     | . payload execution = 4166 s
[2025-12-15 04:50:38] 2025-12-15 09:50:05,707 | INFO     | . stage-out = 0 s
[2025-12-15 04:50:38] 2025-12-15 09:50:05,707 | INFO     | . log creation = 0 s
[2025-12-15 04:50:38] 2025-12-15 09:50:05,707 | INFO     | ..............................
[2025-12-15 04:50:38] 2025-12-15 09:50:05,790 | INFO     | 
[2025-12-15 04:50:38] 2025-12-15 09:50:05,790 | INFO     | job summary report
[2025-12-15 04:50:38] 2025-12-15 09:50:05,790 | INFO     | --------------------------------------------------
[2025-12-15 04:50:38] 2025-12-15 09:50:05,790 | INFO     | PanDA job id: 6931296015
[2025-12-15 04:50:38] 2025-12-15 09:50:05,790 | INFO     | task id: 47898878
[2025-12-15 04:50:38] 2025-12-15 09:50:05,791 | INFO     | errors: (none)
[2025-12-15 04:50:38] 2025-12-15 09:50:05,791 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 04:50:38] 2025-12-15 09:50:05,791 | INFO     | pilot state: finished 
[2025-12-15 04:50:38] 2025-12-15 09:50:05,791 | INFO     | transexitcode: 0
[2025-12-15 04:50:38] 2025-12-15 09:50:05,791 | INFO     | exeerrorcode: 0
[2025-12-15 04:50:38] 2025-12-15 09:50:05,791 | INFO     | exeerrordiag: 
[2025-12-15 04:50:38] 2025-12-15 09:50:05,791 | INFO     | exitcode: 0
[2025-12-15 04:50:38] 2025-12-15 09:50:05,792 | INFO     | exitmsg: OK
[2025-12-15 04:50:38] 2025-12-15 09:50:05,792 | INFO     | cpuconsumptiontime: 45180 s
[2025-12-15 04:50:38] 2025-12-15 09:50:05,792 | INFO     | nevents: 400
[2025-12-15 04:50:38] 2025-12-15 09:50:05,792 | INFO     | neventsw: 0
[2025-12-15 04:50:38] 2025-12-15 09:50:05,792 | INFO     | pid: 11355
[2025-12-15 04:50:38] 2025-12-15 09:50:05,792 | INFO     | pgrp: 11355
[2025-12-15 04:50:38] 2025-12-15 09:50:05,792 | INFO     | corecount: 12
[2025-12-15 04:50:38] 2025-12-15 09:50:05,793 | INFO     | event service: False
[2025-12-15 04:50:38] 2025-12-15 09:50:05,793 | INFO     | sizes: {0: 2283066, 1: 2283922, 6: 2284184, 12: 2284212, 4176: 2310095, 4177: 2310094, 4179: 2319276, 4180: 2319332, 4187: 2319526}
[2025-12-15 04:50:38] 2025-12-15 09:50:05,793 | INFO     | --------------------------------------------------
[2025-12-15 04:50:38] 2025-12-15 09:50:05,793 | INFO     | 
[2025-12-15 04:50:38] 2025-12-15 09:50:05,793 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-15 04:50:38] 2025-12-15 09:50:05,818 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 04:50:38] 2025-12-15 09:50:05,818 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 04:50:38] 2025-12-15 09:50:05,818 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 04:50:38] 2025-12-15 09:50:05,819 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 04:50:38] 2025-12-15 09:50:05,819 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 04:50:38] 2025-12-15 09:50:05,819 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 04:50:38] 2025-12-15 09:50:05,819 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 04:50:38] 2025-12-15 09:50:05,819 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 04:50:38] 2025-12-15 09:50:05,819 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 04:50:38] 2025-12-15 09:50:05,820 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 04:50:38] 2025-12-15 09:50:05,820 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 04:50:38] 2025-12-15 09:50:05,820 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 04:50:38] 2025-12-15 09:50:05,820 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 04:50:38] 2025-12-15 09:50:05,820 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 04:50:38] 2025-12-15 09:50:05,821 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 04:50:38] 2025-12-15 09:50:05,821 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 04:50:38] 2025-12-15 09:50:05,821 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 04:50:38] 2025-12-15 09:50:05,821 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 04:50:38] 2025-12-15 09:50:05,821 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 04:50:38] 2025-12-15 09:50:05,821 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 04:50:38] 2025-12-15 09:50:05,822 | INFO     | job 6931296015 has completed (purged errors)
[2025-12-15 04:50:38] 2025-12-15 09:50:05,822 | INFO     | overall cleanup function is called
[2025-12-15 04:50:38] 2025-12-15 09:50:06,826 | INFO     | --- collectZombieJob: --- 10, [11355]
[2025-12-15 04:50:38] 2025-12-15 09:50:06,826 | INFO     | zombie collector waiting for pid 11355
[2025-12-15 04:50:38] 2025-12-15 09:50:06,826 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 04:50:38] 2025-12-15 09:50:06,827 | INFO     | collected zombie processes
[2025-12-15 04:50:38] 2025-12-15 09:50:06,827 | INFO     | will attempt to kill all subprocesses of pid=11355
[2025-12-15 04:50:38] 2025-12-15 09:50:06,920 | INFO     | process IDs to be killed: [11355] (in reverse order)
[2025-12-15 04:50:38] 2025-12-15 09:50:06,970 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 04:50:38] 2025-12-15 09:50:06,970 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 04:50:38] 2025-12-15 09:50:06,974 | INFO     | did not find any defunct processes belonging to 11355
[2025-12-15 04:50:38] 2025-12-15 09:50:06,976 | INFO     | did not find any defunct processes belonging to 11355
[2025-12-15 04:50:38] 2025-12-15 09:50:06,976 | INFO     | ready for new job
[2025-12-15 04:50:38] 2025-12-15 09:50:06,976 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 04:50:38] 2025-12-15 09:50:06,978 | INFO     | ***************************************
[2025-12-15 04:50:38] 2025-12-15 09:50:06,978 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 04:50:38] 2025-12-15 09:50:06,978 | INFO     | ***************************************
[2025-12-15 04:50:38] 2025-12-15 09:50:06,978 | INFO     | 
[2025-12-15 04:50:38] 2025-12-15 09:50:06,979 | INFO     | architecture information:
[2025-12-15 04:50:38] 2025-12-15 09:50:06,979 | INFO     | executing command: cat /etc/os-release
[2025-12-15 04:50:38] 2025-12-15 09:50:06,994 | INFO     | cat /etc/os-release:
[2025-12-15 04:50:38] NAME="CentOS Linux"
[2025-12-15 04:50:38] VERSION="7 (Core)"
[2025-12-15 04:50:38] ID="centos"
[2025-12-15 04:50:38] ID_LIKE="rhel fedora"
[2025-12-15 04:50:38] VERSION_ID="7"
[2025-12-15 04:50:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 04:50:38] ANSI_COLOR="0;31"
[2025-12-15 04:50:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 04:50:38] HOME_URL="https://www.centos.org/"
[2025-12-15 04:50:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 04:50:38] 
[2025-12-15 04:50:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 04:50:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 04:50:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 04:50:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 04:50:38] 
[2025-12-15 04:50:38] 2025-12-15 09:50:06,995 | INFO     | ***************************************
[2025-12-15 04:50:38] 2025-12-15 09:50:07,498 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-15 04:50:38] 2025-12-15 09:50:07,516 | INFO     | sufficient remaining disk space (29409411072 B)
[2025-12-15 04:50:38] 2025-12-15 09:50:07,517 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 04:50:38] 2025-12-15 09:50:07,517 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 04:50:38] 2025-12-15 09:50:07,517 | INFO     | update_server=False
[2025-12-15 04:50:38] 2025-12-15 09:50:07,517 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 04:50:38] 2025-12-15 09:50:07,518 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 04:50:38] 2025-12-15 09:50:07,518 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 04:50:38] 2025-12-15 09:50:07,518 | INFO     | aborting loop
[2025-12-15 04:50:38] 2025-12-15 09:50:07,696 | INFO     | all payload control threads have been joined
[2025-12-15 04:50:38] 2025-12-15 09:50:08,112 | INFO     | all data control threads have been joined
[2025-12-15 04:50:38] 2025-12-15 09:50:08,226 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 04:50:38] 2025-12-15 09:50:08,263 | INFO     | [monitor] cgroup control has ended
[2025-12-15 04:50:38] 2025-12-15 09:50:08,523 | INFO     | [job] retrieve thread has finished
[2025-12-15 04:50:38] 2025-12-15 09:50:08,524 | INFO     | [job] queue monitor thread has finished
[2025-12-15 04:50:38] 2025-12-15 09:50:08,524 | INFO     | [job] job monitor thread has finished
[2025-12-15 04:50:38] 2025-12-15 09:50:08,619 | INFO     | all job control threads have been joined
[2025-12-15 04:50:38] 2025-12-15 09:50:08,702 | INFO     | [payload] control thread has finished
[2025-12-15 04:50:38] 2025-12-15 09:50:08,724 | INFO     | [job] validate thread has finished
[2025-12-15 04:50:38] 2025-12-15 09:50:08,818 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 04:50:38] 2025-12-15 09:50:09,118 | INFO     | [data] control thread has finished
[2025-12-15 04:50:38] 2025-12-15 09:50:09,133 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 04:50:38] 2025-12-15 09:50:09,238 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 04:50:38] 2025-12-15 09:50:09,262 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 04:50:38] 2025-12-15 09:50:09,307 | INFO     | [payload] validate_post thread has finished
[2025-12-15 04:50:38] 2025-12-15 09:50:09,599 | INFO     | [payload] failed_post thread has finished
[2025-12-15 04:50:38] 2025-12-15 09:50:09,625 | INFO     | [job] control thread has finished
[2025-12-15 04:50:38] 2025-12-15 09:50:09,895 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 04:50:38] 2025-12-15 09:50:09,895 | INFO     | [data] copytool_in thread has finished
[2025-12-15 04:50:38] 2025-12-15 09:50:10,231 | INFO     | [data] copytool_out thread has finished
[2025-12-15 04:50:38] 2025-12-15 09:50:13,244 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 04:50:38] 2025-12-15 09:50:13,348 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140566350206784)>', '<ExcThread(monitor, started 140565622552320)>']
[2025-12-15 04:50:38] 2025-12-15 09:50:18,353 | INFO     | all workflow threads have been joined
[2025-12-15 04:50:38] 2025-12-15 09:50:18,354 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 04:50:38] 2025-12-15 09:50:18,356 | INFO     | traces error code: 0
[2025-12-15 04:50:38] 2025-12-15 09:50:18,357 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 04:50:38] 2025-12-15 09:50:38,587 | INFO     | PID=4866 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-15 04:50:38] 2025-12-15 09:50:38,587 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 04:50:38] 2025-12-15 09:50:38,587 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 04:50:38] 2025-12-15 09:50:38,587 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 04:50:38] 2025-12-15 09:50:38,588 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 04:50:38] 2025-12-15 09:50:38,588 | INFO     | [monitor] control thread has ended
[2025-12-15 04:50:38] 2025-12-15 09:50:38,678 [wrapper] ==== pilot stdout END ====
[2025-12-15 04:50:38] 2025-12-15 09:50:38,682 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 04:50:38] 2025-12-15 09:50:38,686 [wrapper] pilotpid: 4866
[2025-12-15 04:50:38] 2025-12-15 09:50:38,690 [wrapper] Pilot exit status: 0
[2025-12-15 04:50:38] 2025-12-15 09:50:38,706 [wrapper] pandaids: 6931296015
[2025-12-15 04:50:38] 2025-12-15 09:50:38,746 [wrapper] cleanup supervisor_pilot  1786 4867
[2025-12-15 04:50:38] 2025-12-15 09:50:38,750 [wrapper] Test setup, not cleaning
[2025-12-15 04:50:38] 2025-12-15 09:50:38,755 [wrapper] apfmon messages muted
[2025-12-15 04:50:38] 2025-12-15 09:50:38,758 [wrapper] ==== wrapper stdout END ====
[2025-12-15 04:50:38] 2025-12-15 09:50:38,762 [wrapper] ==== wrapper stderr END ====
[2025-12-15 04:50:38]  *** Error codes and diagnostics ***
[2025-12-15 04:50:38]     "exeErrorCode": 0,
[2025-12-15 04:50:38]     "exeErrorDiag": "",
[2025-12-15 04:50:38]     "pilotErrorCode": 0,
[2025-12-15 04:50:38]     "pilotErrorDiag": "",
[2025-12-15 04:50:38]  *** Listing of results directory ***
[2025-12-15 04:50:38] total 378284
[2025-12-15 04:50:38] -rw-r--r-- 1 boincer umatlas    579449 Dec 14 22:37 pilot3.tar.gz
[2025-12-15 04:50:38] -rwx------ 1 boincer umatlas     36322 Dec 14 22:40 runpilot2-wrapper.sh
[2025-12-15 04:50:38] -rw-r--r-- 1 boincer umatlas      5112 Dec 14 22:42 queuedata.json
[2025-12-15 04:50:38] -rw-r--r-- 1 boincer umatlas       100 Dec 15 03:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 04:50:38] -rwxr-xr-x 1 boincer umatlas      7986 Dec 15 03:39 run_atlas
[2025-12-15 04:50:38] -rw-r--r-- 1 boincer umatlas       105 Dec 15 03:39 job.xml
[2025-12-15 04:50:38] -rw-r--r-- 2 boincer umatlas 196515451 Dec 15 03:39 EVNT.47898875._000125.pool.root.1
[2025-12-15 04:50:38] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 03:39 start_atlas.sh
[2025-12-15 04:50:38] drwxrwx--x 2 boincer umatlas      4096 Dec 15 03:39 shared
[2025-12-15 04:50:38] -rw-r--r-- 2 boincer umatlas    592398 Dec 15 03:39 input.tar.gz
[2025-12-15 04:50:38] -rw-r--r-- 1 boincer umatlas         0 Dec 15 03:39 boinc_lockfile
[2025-12-15 04:50:38] -rw-r--r-- 1 boincer umatlas      2500 Dec 15 03:39 pandaJob.out
[2025-12-15 04:50:38] -rw------- 1 boincer umatlas        57 Dec 15 03:39 setup.sh.local
[2025-12-15 04:50:38] -rw------- 1 boincer umatlas    991016 Dec 15 03:39 agis_schedconf.cvmfs.json
[2025-12-15 04:50:38] -rw------- 1 boincer umatlas   1516240 Dec 15 03:40 agis_ddmendpoints.agis.ALL.json
[2025-12-15 04:50:38] drwx------ 5 boincer umatlas      4096 Dec 15 03:40 pilot3
[2025-12-15 04:50:38] -rw-r--r-- 1 boincer umatlas      5951 Dec 15 04:45 init_data.xml
[2025-12-15 04:50:38] -rw------- 1 boincer umatlas 184933487 Dec 15 04:49 HITS.47898878._003151.pool.root.1
[2025-12-15 04:50:38] -rw-r--r-- 1 boincer umatlas       529 Dec 15 04:49 boinc_task_state.xml
[2025-12-15 04:50:38] -rw------- 1 boincer umatlas      1046 Dec 15 04:49 memory_monitor_summary.json
[2025-12-15 04:50:38] -rw------- 1 boincer umatlas        95 Dec 15 04:49 pilot_heartbeat.json
[2025-12-15 04:50:38] -rw------- 1 boincer umatlas    388996 Dec 15 04:49 log.47898878._003151.job.log.tgz.1
[2025-12-15 04:50:38] -rw------- 1 boincer umatlas      7846 Dec 15 04:50 heartbeat.json
[2025-12-15 04:50:38] -rw-r--r-- 1 boincer umatlas      8192 Dec 15 04:50 boinc_mmap_file
[2025-12-15 04:50:38] -rw-r--r-- 1 boincer umatlas        27 Dec 15 04:50 wrapper_checkpoint.txt
[2025-12-15 04:50:38] -rw------- 1 boincer umatlas       744 Dec 15 04:50 pilotlog.txt
[2025-12-15 04:50:38] -rw------- 1 boincer umatlas    613480 Dec 15 04:50 log.47898878._003151.job.log.1
[2025-12-15 04:50:38] -rw------- 1 boincer umatlas       357 Dec 15 04:50 output.list
[2025-12-15 04:50:38] -rw-r--r-- 1 boincer umatlas       620 Dec 15 04:50 runtime_log
[2025-12-15 04:50:38] -rw------- 1 boincer umatlas   1024000 Dec 15 04:50 result.tar.gz
[2025-12-15 04:50:38] -rw-r--r-- 1 boincer umatlas      9339 Dec 15 04:50 runtime_log.err
[2025-12-15 04:50:38] -rw------- 1 boincer umatlas       658 Dec 15 04:50 E2PNDmDdEp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmW6WKDmv3oLLm.diag
[2025-12-15 04:50:38] -rw-r--r-- 1 boincer umatlas     21779 Dec 15 04:50 stderr.txt
[2025-12-15 04:50:38] HITS file was successfully produced:
[2025-12-15 04:50:38] -rw------- 1 boincer umatlas 184933487 Dec 15 04:49 shared/HITS.pool.root.1
[2025-12-15 04:50:38]  *** Contents of shared directory: ***
[2025-12-15 04:50:38] total 374112
[2025-12-15 04:50:38] -rw-r--r-- 2 boincer umatlas 196515451 Dec 15 03:39 ATLAS.root_0
[2025-12-15 04:50:38] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 03:39 start_atlas.sh
[2025-12-15 04:50:38] -rw-r--r-- 2 boincer umatlas    592398 Dec 15 03:39 input.tar.gz
[2025-12-15 04:50:38] -rw------- 1 boincer umatlas 184933487 Dec 15 04:49 HITS.pool.root.1
[2025-12-15 04:50:38] -rw------- 1 boincer umatlas   1024000 Dec 15 04:50 result.tar.gz
04:50:40 (994): run_atlas exited; CPU time 45162.606449
04:50:40 (994): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN