Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:37:42 (1442831): wrapper (7.7.26015): starting
23:37:42 (1442831): wrapper: running run_atlas (--nthreads 12)
[2025-12-14 23:37:42] Arguments: --nthreads 12
[2025-12-14 23:37:42] Threads: 12
[2025-12-14 23:37:42] Checking for CVMFS
[2025-12-14 23:37:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 23:37:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 23:37:42] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 23:37:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 23:37:42] 2.11.5.0 3377194 55168 366444 154023 1 249 41338905 45568001 22356 130560 0 438682815 99.787 288055980 12571 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-14 23:37:42] CVMFS is ok
[2025-12-14 23:37:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 23:37:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 23:37:43] Further information can be found at the LHC@home message board.
[2025-12-14 23:37:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 23:37:43] Checking for apptainer binary...
[2025-12-14 23:37:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 23:37:43] Running /usr/bin/apptainer --version
[2025-12-14 23:37:43] apptainer version 1.4.1-1.el9
[2025-12-14 23:37:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 23:37:43] wns0027.triumf.lcg
[2025-12-14 23:37:43] apptainer works
[2025-12-14 23:37:43] Set ATHENA_PROC_NUMBER=12
[2025-12-14 23:37:43] Set ATHENA_CORE_NUMBER=12
[2025-12-14 23:37:43] Starting ATLAS job with PandaID=6931295816
[2025-12-14 23:37:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 23:43:22]  *** The last 200 lines of the pilot log: ***
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | could have reported an average CPU frequency of 2688 MHz (4 samples)
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | ..............................
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . Timing measurements:
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . get job = 0 s
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . initial setup = 4 s
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . payload setup = 21 s
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . stage-in = 0 s
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . payload execution = 47 s
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . stage-out = 1 s
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . log creation = 0 s
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | ..............................
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-14 23:43:22] 2025-12-15 07:42:25,889 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6931295816/pilotlog.txt
[2025-12-14 23:43:22] 2025-12-15 07:42:25,997 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-14 23:43:22] - Log from pilotlog.txt -
[2025-12-14 23:43:22] 2025-12-15 07:42:25,846 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6931295816/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 23:43:22] 2025-12-15 07:42:25,846 | INFO     | extracted standard info from prmon json
[2025-12-14 23:43:22] 2025-12-15 07:42:25,846 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 23:43:22] 2025-12-15 07:42:25,846 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 23:43:22] 2025-12-15 07:42:25,887 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 23:43:22] 2025-12-15 07:42:25,887 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | WARNING  | wrong length of table data, x=[1765784381.0], y=[2092.0] (must be same and length>=4)
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | could have reported an average CPU frequency of 2688 MHz (4 samples)
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | ..............................
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . Timing measurements:
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . get job = 0 s
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . initial setup = 4 s
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . payload setup = 21 s
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . stage-in = 0 s
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . payload execution = 47 s
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . stage-out = 1 s
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . log creation = 0 s
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | ..............................
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-14 23:43:22] 2025-12-15 07:42:25,889 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6931295816/pilotlog.txt
[2025-12-14 23:43:22] 2025-12-15 07:42:25,997 | WARNING  | 
[2025-12-14 23:43:22] [begin log extracts]
[2025-12-14 23:43:22] - Log from pilotlog.txt -
[2025-12-14 23:43:22] 2025-12-15 07:42:25,846 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6931295816/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 23:43:22] 2025-12-15 07:42:25,846 | INFO     | extracted standard info from prmon json
[2025-12-14 23:43:22] 2025-12-15 07:42:25,846 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 23:43:22] 2025-12-15 07:42:25,846 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 23:43:22] 2025-12-15 07:42:25,887 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 23:43:22] 2025-12-15 07:42:25,887 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | WARNING  | wrong length of table data, x=[1765784381.0], y=[2092.0] (must be same and length>=4)
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | could have reported an average CPU frequency of 2688 MHz (4 samples)
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | ..............................
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . Timing measurements:
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . get job = 0 s
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . initial setup = 4 s
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . payload setup = 21 s
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . stage-in = 0 s
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . payload execution = 47 s
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . stage-out = 1 s
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | . log creation = 0 s
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | ..............................
[2025-12-14 23:43:22] 2025-12-15 07:42:25,888 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-14 23:43:22] 2025-12-15 07:42:25,889 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6931295816/pilotlog.txt
[2025-12-14 23:43:22] [end log extracts]
[2025-12-14 23:43:22] 2025-12-15 07:42:25,998 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-14 23:43:22] 2025-12-15 07:42:25,998 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-14 23:43:22] 2025-12-15 07:42:26,066 | INFO     | time since job start (250s) is within the limit (174528.0s)
[2025-12-14 23:43:22] 2025-12-15 07:42:26,066 | INFO     | 253s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-14 23:43:22] 2025-12-15 07:42:26,385 | INFO     | 
[2025-12-14 23:43:22] 2025-12-15 07:42:26,385 | INFO     | job summary report
[2025-12-14 23:43:22] 2025-12-15 07:42:26,385 | INFO     | --------------------------------------------------
[2025-12-14 23:43:22] 2025-12-15 07:42:26,385 | INFO     | PanDA job id: 6931295816
[2025-12-14 23:43:22] 2025-12-15 07:42:26,385 | INFO     | task id: 47898878
[2025-12-14 23:43:22] 2025-12-15 07:42:26,385 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-14 23:40:02,761 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-14 23:43:22] 2025-12-15 07:42:26,385 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 23:43:22] 2025-12-15 07:42:26,385 | INFO     | pilot state: failed 
[2025-12-14 23:43:22] 2025-12-15 07:42:26,385 | INFO     | transexitcode: 65
[2025-12-14 23:43:22] 2025-12-15 07:42:26,385 | INFO     | exeerrorcode: 65
[2025-12-14 23:43:22] 2025-12-15 07:42:26,385 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-14 23:43:22] 2025-12-15 07:42:26,385 | INFO     | exitcode: 65
[2025-12-14 23:43:22] 2025-12-15 07:42:26,385 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-14 23:43:22] 2025-12-15 07:42:26,385 | INFO     | cpuconsumptiontime: 17 s
[2025-12-14 23:43:22] 2025-12-15 07:42:26,386 | INFO     | nevents: 0
[2025-12-14 23:43:22] 2025-12-15 07:42:26,386 | INFO     | neventsw: 0
[2025-12-14 23:43:22] 2025-12-15 07:42:26,386 | INFO     | pid: 1453343
[2025-12-14 23:43:22] 2025-12-15 07:42:26,386 | INFO     | pgrp: 1453343
[2025-12-14 23:43:22] 2025-12-15 07:42:26,386 | INFO     | corecount: 12
[2025-12-14 23:43:22] 2025-12-15 07:42:26,386 | INFO     | event service: False
[2025-12-14 23:43:22] 2025-12-15 07:42:26,386 | INFO     | sizes: {0: 2283891, 1: 2283891, 12: 2283919, 18: 2284209, 22: 2284237, 74: 2307681, 75: 2307785, 76: 2312105, 77: 2312161, 207: 2312355}
[2025-12-14 23:43:22] 2025-12-15 07:42:26,386 | INFO     | --------------------------------------------------
[2025-12-14 23:43:22] 2025-12-15 07:42:26,386 | INFO     | 
[2025-12-14 23:43:22] 2025-12-15 07:42:26,386 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-14 23:43:22] 2025-12-15 07:42:26,702 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 23:43:22] 2025-12-15 07:42:26,702 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 23:43:22] 2025-12-15 07:42:26,702 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 23:43:22] 2025-12-15 07:42:26,702 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 23:43:22] 2025-12-15 07:42:26,702 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 23:43:22] 2025-12-15 07:42:26,702 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 23:43:22] 2025-12-15 07:42:26,703 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 23:43:22] 2025-12-15 07:42:26,703 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 23:43:22] 2025-12-15 07:42:26,703 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 23:43:22] 2025-12-15 07:42:26,703 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 23:43:22] 2025-12-15 07:42:26,703 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 23:43:22] 2025-12-15 07:42:26,703 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 23:43:22] 2025-12-15 07:42:26,703 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 23:43:22] 2025-12-15 07:42:26,703 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 23:43:22] 2025-12-15 07:42:26,703 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 23:43:22] 2025-12-15 07:42:26,703 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 23:43:22] 2025-12-15 07:42:26,703 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 23:43:22] 2025-12-15 07:42:26,703 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 23:43:22] 2025-12-15 07:42:26,703 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 23:43:22] 2025-12-15 07:42:26,703 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 23:43:22] 2025-12-15 07:42:26,703 | INFO     | job 6931295816 has completed (purged errors)
[2025-12-14 23:43:22] 2025-12-15 07:42:26,703 | INFO     | overall cleanup function is called
[2025-12-14 23:43:22] 2025-12-15 07:42:27,550 | INFO     | PID=1446588 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 23:43:22] 2025-12-15 07:42:27,550 | INFO     | .. there are 35 such processes running
[2025-12-14 23:43:22] 2025-12-15 07:42:27,710 | INFO     | --- collectZombieJob: --- 10, [1453343]
[2025-12-14 23:43:22] 2025-12-15 07:42:27,710 | INFO     | zombie collector waiting for pid 1453343
[2025-12-14 23:43:22] 2025-12-15 07:42:27,710 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 23:43:22] 2025-12-15 07:42:27,710 | INFO     | collected zombie processes
[2025-12-14 23:43:22] 2025-12-15 07:42:27,710 | INFO     | will attempt to kill all subprocesses of pid=1453343
[2025-12-14 23:43:22] 2025-12-15 07:42:28,387 | INFO     | process IDs to be killed: [1453343] (in reverse order)
[2025-12-14 23:43:22] 2025-12-15 07:42:28,518 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 23:43:22] 2025-12-15 07:42:28,519 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 23:43:22] 2025-12-15 07:42:28,562 | INFO     | did not find any defunct processes belonging to 1453343
[2025-12-14 23:43:22] 2025-12-15 07:42:28,613 | INFO     | did not find any defunct processes belonging to 1453343
[2025-12-14 23:43:22] 2025-12-15 07:42:28,618 | INFO     | ready for new job
[2025-12-14 23:43:22] 2025-12-15 07:42:28,618 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 23:43:22] 2025-12-15 07:42:28,619 | INFO     | ***************************************
[2025-12-14 23:43:22] 2025-12-15 07:42:28,619 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 23:43:22] 2025-12-15 07:42:28,620 | INFO     | ***************************************
[2025-12-14 23:43:22] 2025-12-15 07:42:28,620 | INFO     | 
[2025-12-14 23:43:22] 2025-12-15 07:42:28,622 | INFO     | architecture information:
[2025-12-14 23:43:22] 2025-12-15 07:42:28,632 | INFO     | executing command: cat /etc/os-release
[2025-12-14 23:43:22] 2025-12-15 07:42:28,726 | INFO     | cat /etc/os-release:
[2025-12-14 23:43:22] NAME="CentOS Linux"
[2025-12-14 23:43:22] VERSION="7 (Core)"
[2025-12-14 23:43:22] ID="centos"
[2025-12-14 23:43:22] ID_LIKE="rhel fedora"
[2025-12-14 23:43:22] VERSION_ID="7"
[2025-12-14 23:43:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 23:43:22] ANSI_COLOR="0;31"
[2025-12-14 23:43:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 23:43:22] HOME_URL="https://www.centos.org/"
[2025-12-14 23:43:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 23:43:22] 
[2025-12-14 23:43:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 23:43:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 23:43:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 23:43:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 23:43:22] 
[2025-12-14 23:43:22] 2025-12-15 07:42:28,726 | INFO     | ***************************************
[2025-12-14 23:43:22] 2025-12-15 07:42:29,230 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-14 23:43:22] 2025-12-15 07:42:29,301 | INFO     | sufficient remaining disk space (2037777432576 B)
[2025-12-14 23:43:22] 2025-12-15 07:42:29,301 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 23:43:22] 2025-12-15 07:42:29,302 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 23:43:22] 2025-12-15 07:42:29,302 | INFO     | update_server=False
[2025-12-14 23:43:22] 2025-12-15 07:42:29,302 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 23:43:22] 2025-12-15 07:42:29,302 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 23:43:22] 2025-12-15 07:42:29,302 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 23:43:22] 2025-12-15 07:42:29,302 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 23:43:22] 2025-12-15 07:42:29,303 | INFO     | aborting loop
[2025-12-14 23:43:22] 2025-12-15 07:42:29,636 | INFO     | all data control threads have been joined
[2025-12-14 23:43:22] 2025-12-15 07:42:29,691 | INFO     | all job control threads have been joined
[2025-12-14 23:43:22] 2025-12-15 07:42:30,308 | INFO     | [job] retrieve thread has finished
[2025-12-14 23:43:22] 2025-12-15 07:42:30,309 | INFO     | [job] job monitor thread has finished
[2025-12-14 23:43:22] 2025-12-15 07:42:30,319 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 23:43:22] 2025-12-15 07:42:30,642 | INFO     | [data] control thread has finished
[2025-12-14 23:43:22] 2025-12-15 07:42:30,697 | INFO     | [job] control thread has finished
[2025-12-14 23:43:22] 2025-12-15 07:42:30,773 | INFO     | all payload control threads have been joined
[2025-12-14 23:43:22] 2025-12-15 07:42:31,309 | INFO     | [data] copytool_out thread has finished
[2025-12-14 23:43:22] 2025-12-15 07:42:31,333 | INFO     | [payload] validate_post thread has finished
[2025-12-14 23:43:22] 2025-12-15 07:42:31,412 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 23:43:22] 2025-12-15 07:42:31,428 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 23:43:22] 2025-12-15 07:42:31,483 | INFO     | [data] copytool_in thread has finished
[2025-12-14 23:43:22] 2025-12-15 07:42:31,488 | INFO     | [job] validate thread has finished
[2025-12-14 23:43:22] 2025-12-15 07:42:31,578 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 23:43:22] 2025-12-15 07:42:31,630 | INFO     | [payload] failed_post thread has finished
[2025-12-14 23:43:22] 2025-12-15 07:42:31,780 | INFO     | [payload] control thread has finished
[2025-12-14 23:43:22] 2025-12-15 07:42:31,787 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 23:43:22] 2025-12-15 07:42:32,418 | INFO     | [job] queue monitor thread has finished
[2025-12-14 23:43:22] 2025-12-15 07:42:33,312 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 23:43:22] 2025-12-15 07:43:00,064 | INFO     | PID=1446588 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 23:43:22] 2025-12-15 07:43:00,065 | INFO     | .. there are 35 such processes running
[2025-12-14 23:43:22] 2025-12-15 07:43:00,065 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 23:43:22] 2025-12-15 07:43:00,065 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 23:43:22] 2025-12-15 07:43:00,065 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 23:43:22] 2025-12-15 07:43:16,740 | INFO     | [monitor] cgroup control has ended
[2025-12-14 23:43:22] 2025-12-15 07:43:17,213 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140144707221312)>', '<ExcThread(monitor, started 140144011097856)>']
[2025-12-14 23:43:22] 2025-12-15 07:43:18,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 23:43:22] 2025-12-15 07:43:18,175 | INFO     | [monitor] control thread has ended
[2025-12-14 23:43:22] 2025-12-15 07:43:22,239 | INFO     | all workflow threads have been joined
[2025-12-14 23:43:22] 2025-12-15 07:43:22,240 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 23:43:22] 2025-12-15 07:43:22,240 | INFO     | traces error code: 0
[2025-12-14 23:43:22] 2025-12-15 07:43:22,240 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 23:43:22] 2025-12-15 07:43:22,417 [wrapper] ==== pilot stdout END ====
[2025-12-14 23:43:22] 2025-12-15 07:43:22,419 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 23:43:22] 2025-12-15 07:43:22,421 [wrapper] pilotpid: 1446588
[2025-12-14 23:43:22] 2025-12-15 07:43:22,422 [wrapper] Pilot exit status: 0
[2025-12-14 23:43:22] 2025-12-15 07:43:22,475 [wrapper] pandaids: 6931295816
[2025-12-14 23:43:22] 2025-12-15 07:43:22,562 [wrapper] cleanup supervisor_pilot 1446594 1446589
[2025-12-14 23:43:22] 2025-12-15 07:43:22,564 [wrapper] Test setup, not cleaning
[2025-12-14 23:43:22] 2025-12-15 07:43:22,566 [wrapper] apfmon messages muted
[2025-12-14 23:43:22] 2025-12-15 07:43:22,568 [wrapper] ==== wrapper stdout END ====
[2025-12-14 23:43:22] 2025-12-15 07:43:22,569 [wrapper] ==== wrapper stderr END ====
[2025-12-14 23:43:22]  *** Error codes and diagnostics ***
[2025-12-14 23:43:22]     "exeErrorCode": 65,
[2025-12-14 23:43:22]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-14 23:43:22]     "pilotErrorCode": 1305,
[2025-12-14 23:43:22]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-14 23:43:22]  *** Listing of results directory ***
[2025-12-14 23:43:22] total 194696
[2025-12-14 23:43:22] -rw-r--r--. 1 boinc boinc    579449 Dec 14 19:37 pilot3.tar.gz
[2025-12-14 23:43:22] -rwx------. 1 boinc boinc     36322 Dec 14 19:37 runpilot2-wrapper.sh
[2025-12-14 23:43:22] -rw-r--r--. 1 boinc boinc      5112 Dec 14 19:37 queuedata.json
[2025-12-14 23:43:22] -rw-r--r--. 1 boinc boinc       100 Dec 14 23:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 23:43:22] -rwxr-xr-x. 1 boinc boinc      7986 Dec 14 23:37 run_atlas
[2025-12-14 23:43:22] -rw-r--r--. 1 boinc boinc       105 Dec 14 23:37 job.xml
[2025-12-14 23:43:22] -rw-r--r--. 2 boinc boinc 195225427 Dec 14 23:37 EVNT.47898875._000117.pool.root.1
[2025-12-14 23:43:22] -rw-r--r--. 2 boinc boinc     15847 Dec 14 23:37 start_atlas.sh
[2025-12-14 23:43:22] drwxrwx--x. 2 boinc boinc      4096 Dec 14 23:37 shared
[2025-12-14 23:43:22] -rw-r--r--. 2 boinc boinc    592385 Dec 14 23:37 input.tar.gz
[2025-12-14 23:43:22] -rw-r--r--. 1 boinc boinc      6595 Dec 14 23:37 init_data.xml
[2025-12-14 23:43:22] -rw-r--r--. 1 boinc boinc         0 Dec 14 23:37 boinc_lockfile
[2025-12-14 23:43:22] -rw-r--r--. 1 boinc boinc      2500 Dec 14 23:37 pandaJob.out
[2025-12-14 23:43:22] -rw-------. 1 boinc boinc    991016 Dec 14 23:38 agis_schedconf.cvmfs.json
[2025-12-14 23:43:22] -rw-------. 1 boinc boinc   1516240 Dec 14 23:38 agis_ddmendpoints.agis.ALL.json
[2025-12-14 23:43:22] drwx------. 5 boinc boinc      4096 Dec 14 23:38 pilot3
[2025-12-14 23:43:22] -rw-------. 1 boinc boinc       987 Dec 14 23:40 memory_monitor_summary.json
[2025-12-14 23:43:22] -rw-------. 1 boinc boinc     22356 Dec 14 23:40 log.47898878._002952.job.log.tgz.1
[2025-12-14 23:43:22] -rw-------. 1 boinc boinc        95 Dec 14 23:42 pilot_heartbeat.json
[2025-12-14 23:43:22] -rw-------. 1 boinc boinc      8419 Dec 14 23:42 heartbeat.json
[2025-12-14 23:43:22] -rw-r--r--. 1 boinc boinc       523 Dec 14 23:43 boinc_task_state.xml
[2025-12-14 23:43:22] -rw-r--r--. 1 boinc boinc        22 Dec 14 23:43 wrapper_checkpoint.txt
[2025-12-14 23:43:22] -rw-r--r--. 1 boinc boinc      8192 Dec 14 23:43 boinc_mmap_file
[2025-12-14 23:43:22] -rw-------. 1 boinc boinc      4823 Dec 14 23:43 pilotlog.txt
[2025-12-14 23:43:22] -rw-------. 1 boinc boinc     92906 Dec 14 23:43 log.47898878._002952.job.log.1
[2025-12-14 23:43:22] -rw-------. 1 boinc boinc       188 Dec 14 23:43 output.list
[2025-12-14 23:43:22] -rw-r--r--. 1 boinc boinc       620 Dec 14 23:43 runtime_log
[2025-12-14 23:43:22] -rw-------. 1 boinc boinc    133120 Dec 14 23:43 result.tar.gz
[2025-12-14 23:43:22] -rw-r--r--. 1 boinc boinc      8636 Dec 14 23:43 runtime_log.err
[2025-12-14 23:43:22] -rw-------. 1 boinc boinc       644 Dec 14 23:43 b0dKDmtZEp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5cSKDmxLhoEm.diag
[2025-12-14 23:43:22] -rw-r--r--. 1 boinc boinc     21950 Dec 14 23:43 stderr.txt
[2025-12-14 23:43:22] No HITS result produced
[2025-12-14 23:43:22]  *** Contents of shared directory: ***
[2025-12-14 23:43:22] total 191384
[2025-12-14 23:43:22] -rw-r--r--. 2 boinc boinc 195225427 Dec 14 23:37 ATLAS.root_0
[2025-12-14 23:43:22] -rw-r--r--. 2 boinc boinc     15847 Dec 14 23:37 start_atlas.sh
[2025-12-14 23:43:22] -rw-r--r--. 2 boinc boinc    592385 Dec 14 23:37 input.tar.gz
[2025-12-14 23:43:22] -rw-------. 1 boinc boinc    133120 Dec 14 23:43 result.tar.gz
23:43:24 (1442831): run_atlas exited; CPU time 27.471299
23:43:24 (1442831): called boinc_finish(0)

</stderr_txt>
]]>

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