Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:20:13 (24702): wrapper (7.7.26015): starting
02:20:13 (24702): wrapper: running run_atlas (--nthreads 12)
[2025-12-15 02:20:13] Arguments: --nthreads 12
[2025-12-15 02:20:13] Threads: 12
[2025-12-15 02:20:13] Checking for CVMFS
[2025-12-15 02:20:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 02:20:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 02:20:13] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 02:20:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 02:20:13] 2.11.2.0 2937 314734 96032 154023 2 1 14130366 20275201 1 130560 1 139319548 99.966 18884341 15822 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-15 02:20:13] CVMFS is ok
[2025-12-15 02:20:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 02:20:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 02:20:13] Further information can be found at the LHC@home message board.
[2025-12-15 02:20:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 02:20:13] Checking for apptainer binary...
[2025-12-15 02:20:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 02:20:13] Running /usr/bin/apptainer --version
[2025-12-15 02:20:13] apptainer version 1.3.2-1.el7
[2025-12-15 02:20:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 02:20:15] c-205-8.aglt2.org
[2025-12-15 02:20:15] apptainer works
[2025-12-15 02:20:15] Set ATHENA_PROC_NUMBER=12
[2025-12-15 02:20:15] Set ATHENA_CORE_NUMBER=12
[2025-12-15 02:20:15] Starting ATLAS job with PandaID=6929508360
[2025-12-15 02:20:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 03:37:50]  *** The last 200 lines of the pilot log: ***
[2025-12-15 03:37:50] 2025-12-15 08:37:10,802 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-15 03:37:50] 2025-12-15 08:37:10,802 | INFO     | summary of transferred files:
[2025-12-15 03:37:50] 2025-12-15 08:37:10,802 | INFO     |  -- lfn=log.47886933._004639.job.log.tgz.1, status_code=0, status=transferred
[2025-12-15 03:37:50] 2025-12-15 08:37:10,802 | INFO     | stage-out finished correctly
[2025-12-15 03:37:50] 2025-12-15 08:37:11,440 | INFO     | time since job start (4601s) is within the limit (174528.0s)
[2025-12-15 03:37:50] 2025-12-15 08:37:12,513 | WARNING  | process 2447 can no longer be monitored (due to stat problems) - aborting
[2025-12-15 03:37:50] 2025-12-15 08:37:12,514 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929508360/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 03:37:50] 2025-12-15 08:37:12,514 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929508360/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 03:37:50] 2025-12-15 08:37:12,515 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-12-15 03:37:50] 2025-12-15 08:37:12,515 | WARNING  | maxPSS not found in memory monitor output
[2025-12-15 03:37:50] 2025-12-15 08:37:12,515 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4439759 B
[2025-12-15 03:37:50] 2025-12-15 08:37:12,516 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16311 B
[2025-12-15 03:37:50] 2025-12-15 08:37:12,516 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-15 03:37:50] 2025-12-15 08:37:12,533 | INFO     | sufficient remaining disk space (29451354112 B)
[2025-12-15 03:37:50] 2025-12-15 08:37:12,534 | INFO     | work directory size check will use 2768240640 B as a max limit (20% grace limit added, divider=1)
[2025-12-15 03:37:50] 2025-12-15 08:37:12,535 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6929508360: 4738791 B (within 2768240640 B limit)
[2025-12-15 03:37:50] 2025-12-15 08:37:12,535 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6929508360/HITS.47886933._004639.pool.root.1 does not exist (skip from workdir size calculation)
[2025-12-15 03:37:50] 2025-12-15 08:37:12,535 | INFO     | total size of present files: 0 B (workdir size: 4738791 B)
[2025-12-15 03:37:50] 2025-12-15 08:37:12,535 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6929508360/HITS.47886933._004639.pool.root.1 since it does not exist
[2025-12-15 03:37:50] 2025-12-15 08:37:12,628 | INFO     | number of running child processes to parent process 2447: 1
[2025-12-15 03:37:50] 2025-12-15 08:37:12,628 | INFO     | maximum number of monitored processes: 6
[2025-12-15 03:37:50] 2025-12-15 08:37:13,388 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-15 03:37:50] 2025-12-15 08:37:13,451 | INFO     | time since job start (4603s) is within the limit (174528.0s)
[2025-12-15 03:37:50] 2025-12-15 08:37:13,488 | INFO     | job 6929508360 has state=finished
[2025-12-15 03:37:50] 2025-12-15 08:37:13,488 | INFO     | preparing for final server update for job 6929508360 in state='finished'
[2025-12-15 03:37:50] 2025-12-15 08:37:13,489 | INFO     | this job has now completed (state=finished)
[2025-12-15 03:37:50] 2025-12-15 08:37:13,489 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-15 03:37:50] 2025-12-15 08:37:13,489 | INFO     | log transfer has been attempted: DONE
[2025-12-15 03:37:50] 2025-12-15 08:37:13,490 | INFO     | job 6929508360 has finished - writing final server update
[2025-12-15 03:37:50] 2025-12-15 08:37:13,490 | INFO     | total number of processed events: 400 (read)
[2025-12-15 03:37:50] 2025-12-15 08:37:13,491 | INFO     | executing command: lscpu
[2025-12-15 03:37:50] 2025-12-15 08:37:13,517 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-15 03:37:50] 2025-12-15 08:37:15,131 | INFO     | monitor loop #343: job 0:6929508360 is in state 'finished'
[2025-12-15 03:37:50] 2025-12-15 08:37:15,131 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 03:37:50] 2025-12-15 08:37:15,456 | INFO     | time since job start (4605s) is within the limit (174528.0s)
[2025-12-15 03:37:50] 2025-12-15 08:37:17,464 | INFO     | time since job start (4607s) is within the limit (174528.0s)
[2025-12-15 03:37:50] 2025-12-15 08:37:17,634 | INFO     | monitor loop #344: job 0:6929508360 is in state 'finished'
[2025-12-15 03:37:50] 2025-12-15 08:37:17,634 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 03:37:50] 2025-12-15 08:37:18,255 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-15 03:37:50] 2025-12-15 08:37:18,259 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-12-15 03:37:50] 2025-12-15 08:37:18,260 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929508360/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 03:37:50] 2025-12-15 08:37:18,261 | INFO     | extracted standard info from prmon json
[2025-12-15 03:37:50] 2025-12-15 08:37:18,261 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 03:37:50] 2025-12-15 08:37:18,261 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 03:37:50] 2025-12-15 08:37:18,261 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 03:37:50] 2025-12-15 08:37:18,262 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 03:37:50] 2025-12-15 08:37:18,263 | INFO     | fitting pss+swap vs Time
[2025-12-15 03:37:50] 2025-12-15 08:37:18,263 | INFO     | sum of square deviations: 97479037.0
[2025-12-15 03:37:50] 2025-12-15 08:37:18,264 | INFO     | sum of deviations: 1092185937.5
[2025-12-15 03:37:50] 2025-12-15 08:37:18,264 | INFO     | mean x: 1765785608.5
[2025-12-15 03:37:50] 2025-12-15 08:37:18,264 | INFO     | mean y: 2940223.8970588236
[2025-12-15 03:37:50] 2025-12-15 08:37:18,264 | INFO     | intersect: -19781479786.772316
[2025-12-15 03:37:50] 2025-12-15 08:37:18,264 | INFO     | chi2: 0.0018199315817526275
[2025-12-15 03:37:50] 2025-12-15 08:37:18,264 | INFO     | current memory leak: 11.20 B/s (using 68 data points, chi2=0.00)
[2025-12-15 03:37:50] 2025-12-15 08:37:18,265 | INFO     | could have reported an average CPU frequency of 2041 MHz (6 samples)
[2025-12-15 03:37:50] 2025-12-15 08:37:18,265 | INFO     | ..............................
[2025-12-15 03:37:50] 2025-12-15 08:37:18,265 | INFO     | . Timing measurements:
[2025-12-15 03:37:50] 2025-12-15 08:37:18,265 | INFO     | . get job = 0 s
[2025-12-15 03:37:50] 2025-12-15 08:37:18,265 | INFO     | . initial setup = 2 s
[2025-12-15 03:37:50] 2025-12-15 08:37:18,265 | INFO     | . payload setup = 7 s
[2025-12-15 03:37:50] 2025-12-15 08:37:18,265 | INFO     | . stage-in = 0 s
[2025-12-15 03:37:50] 2025-12-15 08:37:18,265 | INFO     | . payload execution = 4571 s
[2025-12-15 03:37:50] 2025-12-15 08:37:18,265 | INFO     | . stage-out = 0 s
[2025-12-15 03:37:50] 2025-12-15 08:37:18,266 | INFO     | . log creation = 0 s
[2025-12-15 03:37:50] 2025-12-15 08:37:18,266 | INFO     | ..............................
[2025-12-15 03:37:50] 2025-12-15 08:37:18,576 | INFO     | 
[2025-12-15 03:37:50] 2025-12-15 08:37:18,576 | INFO     | job summary report
[2025-12-15 03:37:50] 2025-12-15 08:37:18,576 | INFO     | --------------------------------------------------
[2025-12-15 03:37:50] 2025-12-15 08:37:18,576 | INFO     | PanDA job id: 6929508360
[2025-12-15 03:37:50] 2025-12-15 08:37:18,576 | INFO     | task id: 47886933
[2025-12-15 03:37:50] 2025-12-15 08:37:18,577 | INFO     | errors: (none)
[2025-12-15 03:37:50] 2025-12-15 08:37:18,577 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 03:37:50] 2025-12-15 08:37:18,577 | INFO     | pilot state: finished 
[2025-12-15 03:37:50] 2025-12-15 08:37:18,577 | INFO     | transexitcode: 0
[2025-12-15 03:37:50] 2025-12-15 08:37:18,577 | INFO     | exeerrorcode: 0
[2025-12-15 03:37:50] 2025-12-15 08:37:18,577 | INFO     | exeerrordiag: 
[2025-12-15 03:37:50] 2025-12-15 08:37:18,578 | INFO     | exitcode: 0
[2025-12-15 03:37:50] 2025-12-15 08:37:18,578 | INFO     | exitmsg: OK
[2025-12-15 03:37:50] 2025-12-15 08:37:18,578 | INFO     | cpuconsumptiontime: 50316 s
[2025-12-15 03:37:50] 2025-12-15 08:37:18,578 | INFO     | nevents: 400
[2025-12-15 03:37:50] 2025-12-15 08:37:18,578 | INFO     | neventsw: 0
[2025-12-15 03:37:50] 2025-12-15 08:37:18,578 | INFO     | pid: 2447
[2025-12-15 03:37:50] 2025-12-15 08:37:18,579 | INFO     | pgrp: 2447
[2025-12-15 03:37:50] 2025-12-15 08:37:18,579 | INFO     | corecount: 12
[2025-12-15 03:37:50] 2025-12-15 08:37:18,579 | INFO     | event service: False
[2025-12-15 03:37:50] 2025-12-15 08:37:18,579 | INFO     | sizes: {0: 2283794, 1: 2283993, 6: 2284255, 11: 2284283, 4583: 2310376, 4584: 2319374, 4587: 2319586, 4591: 2319780}
[2025-12-15 03:37:50] 2025-12-15 08:37:18,579 | INFO     | --------------------------------------------------
[2025-12-15 03:37:50] 2025-12-15 08:37:18,579 | INFO     | 
[2025-12-15 03:37:50] 2025-12-15 08:37:18,579 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-15 03:37:50] 2025-12-15 08:37:18,604 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 03:37:50] 2025-12-15 08:37:18,604 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 03:37:50] 2025-12-15 08:37:18,604 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 03:37:50] 2025-12-15 08:37:18,605 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 03:37:50] 2025-12-15 08:37:18,605 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 03:37:50] 2025-12-15 08:37:18,605 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 03:37:50] 2025-12-15 08:37:18,605 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 03:37:50] 2025-12-15 08:37:18,605 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 03:37:50] 2025-12-15 08:37:18,605 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 03:37:50] 2025-12-15 08:37:18,606 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 03:37:50] 2025-12-15 08:37:18,606 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 03:37:50] 2025-12-15 08:37:18,606 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 03:37:50] 2025-12-15 08:37:18,606 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 03:37:50] 2025-12-15 08:37:18,606 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 03:37:50] 2025-12-15 08:37:18,606 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 03:37:50] 2025-12-15 08:37:18,607 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 03:37:50] 2025-12-15 08:37:18,607 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 03:37:50] 2025-12-15 08:37:18,607 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 03:37:50] 2025-12-15 08:37:18,607 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 03:37:50] 2025-12-15 08:37:18,607 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 03:37:50] 2025-12-15 08:37:18,608 | INFO     | job 6929508360 has completed (purged errors)
[2025-12-15 03:37:50] 2025-12-15 08:37:18,608 | INFO     | overall cleanup function is called
[2025-12-15 03:37:50] 2025-12-15 08:37:19,615 | INFO     | --- collectZombieJob: --- 10, [2447]
[2025-12-15 03:37:50] 2025-12-15 08:37:19,616 | INFO     | zombie collector waiting for pid 2447
[2025-12-15 03:37:50] 2025-12-15 08:37:19,616 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 03:37:50] 2025-12-15 08:37:19,616 | INFO     | collected zombie processes
[2025-12-15 03:37:50] 2025-12-15 08:37:19,616 | INFO     | will attempt to kill all subprocesses of pid=2447
[2025-12-15 03:37:50] 2025-12-15 08:37:19,707 | INFO     | process IDs to be killed: [2447] (in reverse order)
[2025-12-15 03:37:50] 2025-12-15 08:37:19,782 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 03:37:50] 2025-12-15 08:37:19,782 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 03:37:50] 2025-12-15 08:37:19,786 | INFO     | did not find any defunct processes belonging to 2447
[2025-12-15 03:37:50] 2025-12-15 08:37:19,789 | INFO     | did not find any defunct processes belonging to 2447
[2025-12-15 03:37:50] 2025-12-15 08:37:19,790 | INFO     | ready for new job
[2025-12-15 03:37:50] 2025-12-15 08:37:19,790 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 03:37:50] 2025-12-15 08:37:19,791 | INFO     | ***************************************
[2025-12-15 03:37:50] 2025-12-15 08:37:19,791 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 03:37:50] 2025-12-15 08:37:19,791 | INFO     | ***************************************
[2025-12-15 03:37:50] 2025-12-15 08:37:19,791 | INFO     | 
[2025-12-15 03:37:50] 2025-12-15 08:37:19,792 | INFO     | architecture information:
[2025-12-15 03:37:50] 2025-12-15 08:37:19,792 | INFO     | executing command: cat /etc/os-release
[2025-12-15 03:37:50] 2025-12-15 08:37:19,806 | INFO     | cat /etc/os-release:
[2025-12-15 03:37:50] NAME="CentOS Linux"
[2025-12-15 03:37:50] VERSION="7 (Core)"
[2025-12-15 03:37:50] ID="centos"
[2025-12-15 03:37:50] ID_LIKE="rhel fedora"
[2025-12-15 03:37:50] VERSION_ID="7"
[2025-12-15 03:37:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 03:37:50] ANSI_COLOR="0;31"
[2025-12-15 03:37:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 03:37:50] HOME_URL="https://www.centos.org/"
[2025-12-15 03:37:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 03:37:50] 
[2025-12-15 03:37:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 03:37:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 03:37:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 03:37:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 03:37:50] 
[2025-12-15 03:37:50] 2025-12-15 08:37:19,807 | INFO     | ***************************************
[2025-12-15 03:37:50] 2025-12-15 08:37:20,310 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-15 03:37:50] 2025-12-15 08:37:20,326 | INFO     | sufficient remaining disk space (29456596992 B)
[2025-12-15 03:37:50] 2025-12-15 08:37:20,327 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 03:37:50] 2025-12-15 08:37:20,327 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 03:37:50] 2025-12-15 08:37:20,327 | INFO     | update_server=False
[2025-12-15 03:37:50] 2025-12-15 08:37:20,327 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 03:37:50] 2025-12-15 08:37:20,327 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 03:37:50] 2025-12-15 08:37:20,328 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 03:37:50] 2025-12-15 08:37:20,425 | INFO     | all data control threads have been joined
[2025-12-15 03:37:50] 2025-12-15 08:37:21,143 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 03:37:50] 2025-12-15 08:37:21,143 | INFO     | aborting loop
[2025-12-15 03:37:50] 2025-12-15 08:37:21,271 | INFO     | all job control threads have been joined
[2025-12-15 03:37:50] 2025-12-15 08:37:21,330 | INFO     | [job] retrieve thread has finished
[2025-12-15 03:37:50] 2025-12-15 08:37:21,333 | INFO     | [job] queue monitor thread has finished
[2025-12-15 03:37:50] 2025-12-15 08:37:21,396 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 03:37:50] 2025-12-15 08:37:21,431 | INFO     | [data] control thread has finished
[2025-12-15 03:37:50] 2025-12-15 08:37:21,432 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 03:37:50] 2025-12-15 08:37:21,664 | INFO     | all payload control threads have been joined
[2025-12-15 03:37:50] 2025-12-15 08:37:21,743 | INFO     | [payload] failed_post thread has finished
[2025-12-15 03:37:50] 2025-12-15 08:37:22,153 | INFO     | [job] job monitor thread has finished
[2025-12-15 03:37:50] 2025-12-15 08:37:22,210 | INFO     | [data] copytool_in thread has finished
[2025-12-15 03:37:50] 2025-12-15 08:37:22,245 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 03:37:50] 2025-12-15 08:37:22,277 | INFO     | [job] control thread has finished
[2025-12-15 03:37:50] 2025-12-15 08:37:22,310 | INFO     | [payload] validate_post thread has finished
[2025-12-15 03:37:50] 2025-12-15 08:37:22,427 | INFO     | [job] validate thread has finished
[2025-12-15 03:37:50] 2025-12-15 08:37:22,621 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 03:37:50] 2025-12-15 08:37:22,653 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 03:37:50] 2025-12-15 08:37:22,669 | INFO     | [payload] control thread has finished
[2025-12-15 03:37:50] 2025-12-15 08:37:23,401 | INFO     | [data] copytool_out thread has finished
[2025-12-15 03:37:50] 2025-12-15 08:37:24,334 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 03:37:50] 2025-12-15 08:37:37,510 | INFO     | [monitor] cgroup control has ended
[2025-12-15 03:37:50] 2025-12-15 08:37:39,234 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140249345750848)>', '<ExcThread(monitor, started 140248449275648)>']
[2025-12-15 03:37:50] 2025-12-15 08:37:44,235 | INFO     | all workflow threads have been joined
[2025-12-15 03:37:50] 2025-12-15 08:37:44,235 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 03:37:50] 2025-12-15 08:37:44,235 | INFO     | traces error code: 0
[2025-12-15 03:37:50] 2025-12-15 08:37:44,236 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 03:37:50] 2025-12-15 08:37:50,661 | INFO     | PID=28391 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-15 03:37:50] 2025-12-15 08:37:50,662 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 03:37:50] 2025-12-15 08:37:50,662 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 03:37:50] 2025-12-15 08:37:50,662 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 03:37:50] 2025-12-15 08:37:50,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 03:37:50] 2025-12-15 08:37:50,663 | CRITICAL | thread 'MainThread' is not alive
[2025-12-15 03:37:50] 2025-12-15 08:37:50,663 | INFO     | [monitor] control thread has ended
[2025-12-15 03:37:50] 2025-12-15 08:37:50,751 [wrapper] ==== pilot stdout END ====
[2025-12-15 03:37:50] 2025-12-15 08:37:50,755 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 03:37:50] 2025-12-15 08:37:50,758 [wrapper] pilotpid: 28391
[2025-12-15 03:37:50] 2025-12-15 08:37:50,762 [wrapper] Pilot exit status: 0
[2025-12-15 03:37:50] 2025-12-15 08:37:50,778 [wrapper] pandaids: 6929508360
[2025-12-15 03:37:50] 2025-12-15 08:37:50,818 [wrapper] cleanup supervisor_pilot 30659 28392
[2025-12-15 03:37:50] 2025-12-15 08:37:50,821 [wrapper] Test setup, not cleaning
[2025-12-15 03:37:50] 2025-12-15 08:37:50,825 [wrapper] apfmon messages muted
[2025-12-15 03:37:50] 2025-12-15 08:37:50,829 [wrapper] ==== wrapper stdout END ====
[2025-12-15 03:37:50] 2025-12-15 08:37:50,833 [wrapper] ==== wrapper stderr END ====
[2025-12-15 03:37:50]  *** Error codes and diagnostics ***
[2025-12-15 03:37:50]     "exeErrorCode": 0,
[2025-12-15 03:37:50]     "exeErrorDiag": "",
[2025-12-15 03:37:50]     "pilotErrorCode": 0,
[2025-12-15 03:37:50]     "pilotErrorDiag": "",
[2025-12-15 03:37:50]  *** Listing of results directory ***
[2025-12-15 03:37:50] total 338344
[2025-12-15 03:37:50] -rw-r--r-- 1 boincer umatlas      5112 Dec 14 18:13 queuedata.json
[2025-12-15 03:37:50] -rw-r--r-- 1 boincer umatlas    579449 Dec 14 18:13 pilot3.tar.gz
[2025-12-15 03:37:50] -rwx------ 1 boincer umatlas     36322 Dec 14 18:13 runpilot2-wrapper.sh
[2025-12-15 03:37:50] -rw-r--r-- 1 boincer umatlas       100 Dec 15 02:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 03:37:50] -rwxr-xr-x 1 boincer umatlas      7986 Dec 15 02:20 run_atlas
[2025-12-15 03:37:50] -rw-r--r-- 1 boincer umatlas       105 Dec 15 02:20 job.xml
[2025-12-15 03:37:50] -rw-r--r-- 2 boincer umatlas 190159376 Dec 15 02:20 EVNT.47886929._000221.pool.root.1
[2025-12-15 03:37:50] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 02:20 start_atlas.sh
[2025-12-15 03:37:50] drwxrwx--x 2 boincer umatlas      4096 Dec 15 02:20 shared
[2025-12-15 03:37:50] -rw-r--r-- 2 boincer umatlas    592396 Dec 15 02:20 input.tar.gz
[2025-12-15 03:37:50] -rw-r--r-- 1 boincer umatlas         0 Dec 15 02:20 boinc_lockfile
[2025-12-15 03:37:50] -rw-r--r-- 1 boincer umatlas      2513 Dec 15 02:20 pandaJob.out
[2025-12-15 03:37:50] -rw------- 1 boincer umatlas        57 Dec 15 02:20 setup.sh.local
[2025-12-15 03:37:50] -rw------- 1 boincer umatlas    991016 Dec 15 02:20 agis_schedconf.cvmfs.json
[2025-12-15 03:37:50] -rw------- 1 boincer umatlas   1516240 Dec 15 02:20 agis_ddmendpoints.agis.ALL.json
[2025-12-15 03:37:50] drwx------ 5 boincer umatlas      4096 Dec 15 02:20 pilot3
[2025-12-15 03:37:50] -rw-r--r-- 1 boincer umatlas      5951 Dec 15 03:31 init_data.xml
[2025-12-15 03:37:50] -rw------- 1 boincer umatlas 150285848 Dec 15 03:36 HITS.47886933._004639.pool.root.1
[2025-12-15 03:37:50] -rw-r--r-- 1 boincer umatlas       529 Dec 15 03:36 boinc_task_state.xml
[2025-12-15 03:37:50] -rw------- 1 boincer umatlas      1045 Dec 15 03:37 memory_monitor_summary.json
[2025-12-15 03:37:50] -rw------- 1 boincer umatlas    392003 Dec 15 03:37 log.47886933._004639.job.log.tgz.1
[2025-12-15 03:37:50] -rw------- 1 boincer umatlas      7841 Dec 15 03:37 heartbeat.json
[2025-12-15 03:37:50] -rw-r--r-- 1 boincer umatlas      8192 Dec 15 03:37 boinc_mmap_file
[2025-12-15 03:37:50] -rw-r--r-- 1 boincer umatlas        27 Dec 15 03:37 wrapper_checkpoint.txt
[2025-12-15 03:37:50] -rw------- 1 boincer umatlas       815 Dec 15 03:37 pilotlog.txt
[2025-12-15 03:37:50] -rw------- 1 boincer umatlas        95 Dec 15 03:37 pilot_heartbeat.json
[2025-12-15 03:37:50] -rw------- 1 boincer umatlas    666733 Dec 15 03:37 log.47886933._004639.job.log.1
[2025-12-15 03:37:50] -rw------- 1 boincer umatlas       357 Dec 15 03:37 output.list
[2025-12-15 03:37:50] -rw-r--r-- 1 boincer umatlas       620 Dec 15 03:37 runtime_log
[2025-12-15 03:37:50] -rw------- 1 boincer umatlas   1075200 Dec 15 03:37 result.tar.gz
[2025-12-15 03:37:50] -rw-r--r-- 1 boincer umatlas      9339 Dec 15 03:37 runtime_log.err
[2025-12-15 03:37:50] -rw------- 1 boincer umatlas       658 Dec 15 03:37 qV9LDmrSAp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvASKDmZ1XGxn.diag
[2025-12-15 03:37:50] -rw-r--r-- 1 boincer umatlas     22471 Dec 15 03:37 stderr.txt
[2025-12-15 03:37:50] HITS file was successfully produced:
[2025-12-15 03:37:50] -rw------- 1 boincer umatlas 150285848 Dec 15 03:36 shared/HITS.pool.root.1
[2025-12-15 03:37:50]  *** Contents of shared directory: ***
[2025-12-15 03:37:50] total 334116
[2025-12-15 03:37:50] -rw-r--r-- 2 boincer umatlas 190159376 Dec 15 02:20 ATLAS.root_0
[2025-12-15 03:37:50] -rw-r--r-- 2 boincer umatlas     15847 Dec 15 02:20 start_atlas.sh
[2025-12-15 03:37:50] -rw-r--r-- 2 boincer umatlas    592396 Dec 15 02:20 input.tar.gz
[2025-12-15 03:37:50] -rw------- 1 boincer umatlas 150285848 Dec 15 03:36 HITS.pool.root.1
[2025-12-15 03:37:50] -rw------- 1 boincer umatlas   1075200 Dec 15 03:37 result.tar.gz
03:37:52 (24702): run_atlas exited; CPU time 50302.012650
03:37:52 (24702): called boinc_finish(0)

</stderr_txt>
]]>

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