Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-16 13:20:03 (26988): vboxwrapper version 26210
2025-12-16 13:20:03 (26988): BOINC client version: 8.2.4
2025-12-16 13:20:04 (26988): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-12-16 13:20:04 (26988): Successfully copied 'init_data.xml' to the shared directory.
2025-12-16 13:20:04 (26988): Create VM. (boinc_0bd4e8cdec4c9a94, slot#1)
2025-12-16 13:20:05 (26988): Setting Memory Size for VM. (4800MB)
2025-12-16 13:20:05 (26988): Setting CPU Count for VM. (8)
2025-12-16 13:20:05 (26988): Setting Chipset Options for VM.
2025-12-16 13:20:05 (26988): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-16 13:20:06 (26988): Setting Boot Options for VM.
2025-12-16 13:20:06 (26988): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-16 13:20:06 (26988): Enabling VM Network Access.
2025-12-16 13:20:07 (26988): Disabling USB Support for VM.
2025-12-16 13:20:07 (26988): Disabling COM Port Support for VM.
2025-12-16 13:20:07 (26988): Disabling LPT Port Support for VM.
2025-12-16 13:20:07 (26988): Disabling Audio Support for VM.
2025-12-16 13:20:08 (26988): Disabling Clipboard Support for VM.
2025-12-16 13:20:08 (26988): Disabling Drag and Drop Support for VM.
2025-12-16 13:20:08 (26988): Adding storage controller(s) to VM.
2025-12-16 13:20:08 (26988): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-16 13:20:09 (26988): Adding VirtualBox Guest Additions to VM.
2025-12-16 13:20:09 (26988): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-16 13:20:09 (26988): forwarding host port 65412 to guest port 80
2025-12-16 13:20:10 (26988): Enabling remote desktop for VM.
2025-12-16 13:20:10 (26988): Enabling shared directory for VM.
2025-12-16 13:20:11 (26988): Starting VM using VBoxManage interface. (boinc_0bd4e8cdec4c9a94, slot#1)
2025-12-16 13:20:16 (26988): Successfully started VM. (PID = '25424')
2025-12-16 13:20:16 (26988): Reporting VM Process ID to BOINC.
2025-12-16 13:20:16 (26988): Guest Log: BIOS: VirtualBox 7.0.22
2025-12-16 13:20:16 (26988): Guest Log: CPUID EDX: 0x178bfbff
2025-12-16 13:20:16 (26988): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-16 13:20:16 (26988): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-16 13:20:16 (26988): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-16 13:20:16 (26988): Detected: Web Application Enabled (http://localhost:65412)
2025-12-16 13:20:16 (26988): Detected: Remote Desktop Enabled (localhost:65413)
2025-12-16 13:20:16 (26988): Preference change detected
2025-12-16 13:20:16 (26988): Setting CPU throttle for VM. (90%)
2025-12-16 13:20:17 (26988): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-16 13:20:18 (26988): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-16 13:20:18 (26988): Guest Log: BIOS: Booting from Hard Disk...
2025-12-16 13:20:21 (26988): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-16 13:20:21 (26988): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-16 13:20:21 (26988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-16 13:20:24 (26988): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-16 13:20:24 (26988): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-12-16 13:20:29 (26988): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-16 13:20:29 (26988): Guest Log: 00:00:00.000247 main     Log opened 2025-12-16T13:20:27.649745000Z
2025-12-16 13:20:29 (26988): Guest Log: 00:00:00.000398 main     OS Product: Linux
2025-12-16 13:20:29 (26988): Guest Log: 00:00:00.000427 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-16 13:20:29 (26988): Guest Log: 00:00:00.000450 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-16 13:20:29 (26988): Guest Log: 00:00:00.000475 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-16 13:20:29 (26988): Guest Log: 00:00:00.000475 main     Process ID: 1366
2025-12-16 13:20:29 (26988): Guest Log: 00:00:00.000475 main     Package type: LINUX_64BITS_GENERIC
2025-12-16 13:20:29 (26988): Guest Log: 00:00:00.001240 main     5.2.32 r132073 started. Verbose level = 0
2025-12-16 13:20:29 (26988): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-16 13:20:29 (26988): Guest Log: [INFO] Mounting shared directory
2025-12-16 13:20:29 (26988): Guest Log: [INFO] Checking for init_data.xml
2025-12-16 13:20:31 (26988): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-16 13:20:31 (26988): Guest Log: [INFO] Detected branch: prod
2025-12-16 13:20:31 (26988): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-16 13:20:31 (26988): Guest Log: Copying input files
2025-12-16 13:20:32 (26988): Guest Log: Copied input files into RunAtlas.
2025-12-16 13:20:32 (26988): Guest Log: Detected user-configured HTTP proxy at http://proxy.kippola.kiulu10clients.net:3128 - will set in /etc/cvmfs/default.local
2025-12-16 13:20:39 (26988): Guest Log: 00:00:10.006895 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 401 563 000ns (GuestNow=1 765 884 039 250 869 000 ns GuestLast=1 765 891 227 652 432 000 ns fSetTimeLastLoop=true )
2025-12-16 13:21:16 (26988): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-16 13:21:16 (26988): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-16 13:21:16 (26988): Guest Log: 2.6.3.0 1644 0 31476 154069 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.123.108:3128 1
2025-12-16 13:21:17 (26988): Guest Log: copied the webapp to /var/www
2025-12-16 13:21:17 (26988): Guest Log: ATHENA_PROC_NUMBER=8
2025-12-16 13:21:17 (26988): Guest Log: ATHENA_CORE_NUMBER=8
2025-12-16 13:21:17 (26988): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-16 13:21:17 (26988): Guest Log:  *** Starting ATLAS job. (PandaID=6930660064 taskID=47898878) ***
2025-12-16 13:37:16 (26988): VM state change detected. (old = 'running', new = 'paused')
2025-12-16 13:37:36 (26988): VM state change detected. (old = 'paused', new = 'running')
2025-12-16 13:38:06 (26988): VM state change detected. (old = 'running', new = 'paused')
2025-12-16 13:38:26 (26988): VM state change detected. (old = 'paused', new = 'running')
2025-12-16 13:40:37 (26988): VM state change detected. (old = 'running', new = 'paused')
2025-12-16 13:40:58 (26988): VM state change detected. (old = 'paused', new = 'running')
2025-12-16 13:52:29 (26988): VM state change detected. (old = 'running', new = 'paused')
2025-12-16 13:52:49 (26988): VM state change detected. (old = 'paused', new = 'running')
2025-12-16 14:04:31 (26988): VM state change detected. (old = 'running', new = 'paused')
2025-12-16 14:04:52 (26988): VM state change detected. (old = 'paused', new = 'running')
2025-12-16 14:26:48 (26988): Guest Log:  *** Job finished ***
2025-12-16 14:26:48 (26988): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-16 14:26:48 (26988): Guest Log: 2025-12-16 12:24:55,061 | INFO     | all workflow threads have been joined
2025-12-16 14:26:48 (26988): Guest Log: 2025-12-16 12:24:55,062 | INFO     | end of generic workflow (traces error code: 0)
2025-12-16 14:26:48 (26988): Guest Log: 2025-12-16 12:24:55,062 | INFO     | traces error code: 0
2025-12-16 14:26:48 (26988): Guest Log: 2025-12-16 12:24:55,062 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-16 14:26:48 (26988): Guest Log: 2025-12-16 12:25:06,841 | INFO     | PID=6079 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-12-16 14:26:48 (26988): Guest Log: 2025-12-16 12:25:06,843 | INFO     | found 0 job(s) in 20 queues
2025-12-16 14:26:48 (26988): Guest Log: 2025-12-16 12:25:06,843 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-12-16 14:26:48 (26988): Guest Log: 2025-12-16 12:25:06,843 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-12-16 14:26:48 (26988): Guest Log: 2025-12-16 12:25:06,843 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-16 14:26:48 (26988): Guest Log: 2025-12-16 12:25:06,843 | INFO     | [monitor] control thread has ended
2025-12-16 14:26:48 (26988): Guest Log: 2025-12-16 12:25:07,003 [wrapper] ==== pilot stdout END ====
2025-12-16 14:26:48 (26988): Guest Log: 2025-12-16 12:25:07,012 [wrapper] ==== wrapper stdout RESUME ====
2025-12-16 14:26:48 (26988): Guest Log: 2025-12-16 12:25:07,018 [wrapper] pilotpid: 6079
2025-12-16 14:26:48 (26988): Guest Log: 2025-12-16 12:25:07,024 [wrapper] Pilot exit status: 0
2025-12-16 14:26:48 (26988): Guest Log: 2025-12-16 12:25:07,090 [wrapper] pandaids: 6930660064
2025-12-16 14:26:48 (26988): Guest Log: 2025-12-16 12:25:07,132 [wrapper] cleanup supervisor_pilot 31209 6080
2025-12-16 14:26:48 (26988): Guest Log: 2025-12-16 12:25:07,143 [wrapper] Test setup, not cleaning
2025-12-16 14:26:48 (26988): Guest Log: 2025-12-16 12:25:07,150 [wrapper] apfmon messages muted
2025-12-16 14:26:48 (26988): Guest Log: 2025-12-16 12:25:07,155 [wrapper] ==== wrapper stdout END ====
2025-12-16 14:26:48 (26988): Guest Log: 2025-12-16 12:25:07,163 [wrapper] ==== wrapper stderr END ====
2025-12-16 14:26:48 (26988): Guest Log:  *** Error codes and diagnostics ***
2025-12-16 14:26:48 (26988): Guest Log:     "exeErrorCode": 0,
2025-12-16 14:26:48 (26988): Guest Log:     "exeErrorDiag": "",
2025-12-16 14:26:48 (26988): Guest Log:     "pilotErrorCode": 0,
2025-12-16 14:26:48 (26988): Guest Log:     "pilotErrorDiag": "",
2025-12-16 14:26:48 (26988): Guest Log:  *** Listing of results directory ***
2025-12-16 14:26:48 (26988): Guest Log: total 176792
2025-12-16 14:26:48 (26988): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Dec 14 15:56 pilot3.tar.gz
2025-12-16 14:26:48 (26988): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Dec 14 15:56 queuedata.json
2025-12-16 14:26:48 (26988): Guest Log: -rwx------. 1 atlas atlas     36322 Dec 14 15:56 runpilot2-wrapper.sh
2025-12-16 14:26:48 (26988): Guest Log: -rwxr-xr-x. 1 atlas atlas      9532 Dec 16 11:20 init_data.xml
2025-12-16 14:26:48 (26988): Guest Log: -rwxr-xr-x. 1 atlas atlas    592388 Dec 16 11:20 input.tar.gz
2025-12-16 14:26:48 (26988): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Dec 16 11:20 start_atlas.sh
2025-12-16 14:26:48 (26988): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec 16 11:20 EVNT.47898875._000058.pool.root.1 -> /data/./ATLAS.root_0
2025-12-16 14:26:48 (26988): Guest Log: -rw-r--r--. 1 atlas atlas      2499 Dec 16 11:21 pandaJob.out
2025-12-16 14:26:48 (26988): Guest Log: -rw-------. 1 atlas atlas        69 Dec 16 11:21 setup.sh.local
2025-12-16 14:26:48 (26988): Guest Log: -rw-------. 1 atlas atlas    991017 Dec 16 11:21 agis_schedconf.cvmfs.json
2025-12-16 14:26:48 (26988): Guest Log: -rw-------. 1 atlas atlas   1516240 Dec 16 11:21 agis_ddmendpoints.agis.ALL.json
2025-12-16 14:26:48 (26988): Guest Log: drwx------. 5 atlas atlas      4096 Dec 16 11:21 pilot3
2025-12-16 14:26:48 (26988): Guest Log: -rw-------. 1 atlas atlas 175489565 Dec 16 12:23 HITS.47898878._001465.pool.root.1
2025-12-16 14:26:48 (26988): Guest Log: -rw-------. 1 atlas atlas        95 Dec 16 12:24 pilot_heartbeat.json
2025-12-16 14:26:48 (26988): Guest Log: -rw-------. 1 atlas atlas      1043 Dec 16 12:24 memory_monitor_summary.json
2025-12-16 14:26:48 (26988): Guest Log: -rw-------. 1 atlas atlas    309718 Dec 16 12:24 log.47898878._001465.job.log.tgz.1
2025-12-16 14:26:48 (26988): Guest Log: -rw-------. 1 atlas atlas      7809 Dec 16 12:24 heartbeat.json
2025-12-16 14:26:48 (26988): Guest Log: -rw-------. 1 atlas atlas       744 Dec 16 12:25 pilotlog.txt
2025-12-16 14:26:48 (26988): Guest Log: -rw-------. 1 atlas atlas    536819 Dec 16 12:25 log.47898878._001465.job.log.1
2025-12-16 14:26:48 (26988): Guest Log: -rw-------. 1 atlas atlas       357 Dec 16 12:25 output.list
2025-12-16 14:26:48 (26988): Guest Log: -rw-r--r--. 1 atlas atlas       620 Dec 16 12:25 runtime_log
2025-12-16 14:26:48 (26988): Guest Log: -rw-------. 1 atlas atlas    870400 Dec 16 12:25 result.tar.gz
2025-12-16 14:26:48 (26988): Guest Log: -rw-------. 1 atlas atlas       650 Dec 16 12:25 XrwNDmKd3o8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsqVKDmEMI7mn.diag
2025-12-16 14:26:48 (26988): Guest Log: -rw-r--r--. 1 atlas atlas      9321 Dec 16 12:25 runtime_log.err
2025-12-16 14:26:48 (26988): Guest Log: Looking for outputfile HITS.47898878._001465.pool.root.1
2025-12-16 14:26:48 (26988): Guest Log: HITS file was successfully produced
2025-12-16 14:26:48 (26988): Guest Log: -rw-------. 1 atlas atlas 175489565 Dec 16 12:23 /home/atlas/RunAtlas/HITS.47898878._001465.pool.root.1
2025-12-16 14:26:49 (26988): Guest Log: Successfully finished the ATLAS job!
2025-12-16 14:26:49 (26988): Guest Log: Copying the results back to the shared directory!
2025-12-16 14:26:49 (26988): Guest Log:  *** Contents of shared directory: ***
2025-12-16 14:26:49 (26988): Guest Log: total 363872
2025-12-16 14:26:49 (26988): Guest Log: -rwxrwxrwx. 1 root root 195615555 Dec 16 11:20 ATLAS.root_0
2025-12-16 14:26:49 (26988): Guest Log: -rwxrwxrwx. 1 root root 175489565 Dec 16  2025 HITS.pool.root.1
2025-12-16 14:26:49 (26988): Guest Log: -rwxrwxrwx. 1 root root      9532 Dec 16 11:20 init_data.xml
2025-12-16 14:26:49 (26988): Guest Log: -rwxrwxrwx. 1 root root    592388 Dec 15 07:08 input.tar.gz
2025-12-16 14:26:49 (26988): Guest Log: -rwxrwxrwx. 1 root root    870400 Dec 16  2025 result.tar.gz
2025-12-16 14:26:49 (26988): Guest Log: -rwxrwxrwx. 1 root root     15847 Dec 15 07:08 start_atlas.sh
2025-12-16 14:26:49 (26988): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-16 14:26:49 (26988): VM Completion File Detected.
2025-12-16 14:26:49 (26988): Powering off VM.
2025-12-16 14:26:50 (26988): Successfully stopped VM.
2025-12-16 14:26:50 (26988): Deregistering VM. (boinc_0bd4e8cdec4c9a94, slot#1)
2025-12-16 14:26:50 (26988): Removing network bandwidth throttle group from VM.
2025-12-16 14:26:50 (26988): Removing VM from VirtualBox.
2025-12-16 14:26:55 (26988): called boinc_finish(0)

</stderr_txt>
]]>

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