Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:23:57 (1262699): wrapper (7.7.26015): starting
22:23:57 (1262699): wrapper: running run_atlas (--nthreads 12)
[2025-12-14 22:23:57] Arguments: --nthreads 12
[2025-12-14 22:23:57] Threads: 12
[2025-12-14 22:23:57] Checking for CVMFS
[2025-12-14 22:23:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 22:23:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 22:23:57] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 22:23:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 22:23:57] 2.11.3.0 826709 20223 367420 154021 0 667 26137873 45568000 19992 130560 0 147659090 99.812 84672790 30660 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-14 22:23:57] CVMFS is ok
[2025-12-14 22:23:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 22:23:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 22:23:57] Further information can be found at the LHC@home message board.
[2025-12-14 22:23:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 22:23:57] Checking for apptainer binary...
[2025-12-14 22:23:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 22:23:57] Running /usr/bin/apptainer --version
[2025-12-14 22:23:57] apptainer version 1.4.1-1.el9
[2025-12-14 22:23:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 22:23:57] wns0171.triumf.lcg
[2025-12-14 22:23:57] apptainer works
[2025-12-14 22:23:57] Set ATHENA_PROC_NUMBER=12
[2025-12-14 22:23:57] Set ATHENA_CORE_NUMBER=12
[2025-12-14 22:23:57] Starting ATLAS job with PandaID=6929467602
[2025-12-14 22:23:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 22:28:29]  *** The last 200 lines of the pilot log: ***
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | will not add max space = 0 B to job metrics
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | WARNING  | wrong length of table data, x=[1765779903.0], y=[1780.0] (must be same and length>=4)
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | could have reported an average CPU frequency of 2835 MHz (4 samples)
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | ..............................
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | . Timing measurements:
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | . get job = 0 s
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | . initial setup = 3 s
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | . payload setup = 12 s
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | . stage-in = 0 s
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | . payload execution = 24 s
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | . stage-out = 0 s
[2025-12-14 22:28:29] 2025-12-15 06:27:34,477 | INFO     | . log creation = 0 s
[2025-12-14 22:28:29] 2025-12-15 06:27:34,477 | INFO     | ..............................
[2025-12-14 22:28:29] 2025-12-15 06:27:34,477 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-14 22:28:29] 2025-12-15 06:27:34,477 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929467602/pilotlog.txt
[2025-12-14 22:28:29] 2025-12-15 06:27:34,486 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-14 22:28:29] - Log from pilotlog.txt -
[2025-12-14 22:28:29] 2025-12-15 06:27:34,475 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 22:28:29] 2025-12-15 06:27:34,475 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 22:28:29] 2025-12-15 06:27:34,475 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | WARNING  | found no stored workdir sizes
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | will not add max space = 0 B to job metrics
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | WARNING  | wrong length of table data, x=[1765779903.0], y=[1780.0] (must be same and length>=4)
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | could have reported an average CPU frequency of 2835 MHz (4 samples)
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | ..............................
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | . Timing measurements:
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | . get job = 0 s
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | . initial setup = 3 s
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | . payload setup = 12 s
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | . stage-in = 0 s
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | . payload execution = 24 s
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | . stage-out = 0 s
[2025-12-14 22:28:29] 2025-12-15 06:27:34,477 | INFO     | . log creation = 0 s
[2025-12-14 22:28:29] 2025-12-15 06:27:34,477 | INFO     | ..............................
[2025-12-14 22:28:29] 2025-12-15 06:27:34,477 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-14 22:28:29] 2025-12-15 06:27:34,477 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929467602/pilotlog.txt
[2025-12-14 22:28:29] 2025-12-15 06:27:34,486 | WARNING  | 
[2025-12-14 22:28:29] [begin log extracts]
[2025-12-14 22:28:29] - Log from pilotlog.txt -
[2025-12-14 22:28:29] 2025-12-15 06:27:34,475 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 22:28:29] 2025-12-15 06:27:34,475 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 22:28:29] 2025-12-15 06:27:34,475 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | WARNING  | found no stored workdir sizes
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | will not add max space = 0 B to job metrics
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | WARNING  | wrong length of table data, x=[1765779903.0], y=[1780.0] (must be same and length>=4)
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | could have reported an average CPU frequency of 2835 MHz (4 samples)
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | ..............................
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | . Timing measurements:
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | . get job = 0 s
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | . initial setup = 3 s
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | . payload setup = 12 s
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | . stage-in = 0 s
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | . payload execution = 24 s
[2025-12-14 22:28:29] 2025-12-15 06:27:34,476 | INFO     | . stage-out = 0 s
[2025-12-14 22:28:29] 2025-12-15 06:27:34,477 | INFO     | . log creation = 0 s
[2025-12-14 22:28:29] 2025-12-15 06:27:34,477 | INFO     | ..............................
[2025-12-14 22:28:29] 2025-12-15 06:27:34,477 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-14 22:28:29] 2025-12-15 06:27:34,477 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929467602/pilotlog.txt
[2025-12-14 22:28:29] [end log extracts]
[2025-12-14 22:28:29] 2025-12-15 06:27:34,486 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-14 22:28:29] 2025-12-15 06:27:34,487 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-14 22:28:29] 2025-12-15 06:27:34,655 | INFO     | 
[2025-12-14 22:28:29] 2025-12-15 06:27:34,655 | INFO     | job summary report
[2025-12-14 22:28:29] 2025-12-15 06:27:34,655 | INFO     | --------------------------------------------------
[2025-12-14 22:28:29] 2025-12-15 06:27:34,655 | INFO     | PanDA job id: 6929467602
[2025-12-14 22:28:29] 2025-12-15 06:27:34,655 | INFO     | task id: 47898763
[2025-12-14 22:28:29] 2025-12-15 06:27:34,655 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-14 22:25:14,878 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-14 22:28:29] 2025-12-15 06:27:34,655 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 22:28:29] 2025-12-15 06:27:34,655 | INFO     | pilot state: failed 
[2025-12-14 22:28:29] 2025-12-15 06:27:34,655 | INFO     | transexitcode: 65
[2025-12-14 22:28:29] 2025-12-15 06:27:34,656 | INFO     | exeerrorcode: 65
[2025-12-14 22:28:29] 2025-12-15 06:27:34,656 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-14 22:28:29] 2025-12-15 06:27:34,656 | INFO     | exitcode: 65
[2025-12-14 22:28:29] 2025-12-15 06:27:34,656 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-14 22:28:29] 2025-12-15 06:27:34,656 | INFO     | cpuconsumptiontime: 13 s
[2025-12-14 22:28:29] 2025-12-15 06:27:34,656 | INFO     | nevents: 0
[2025-12-14 22:28:29] 2025-12-15 06:27:34,656 | INFO     | neventsw: 0
[2025-12-14 22:28:29] 2025-12-15 06:27:34,656 | INFO     | pid: 1273315
[2025-12-14 22:28:29] 2025-12-15 06:27:34,656 | INFO     | pgrp: 1273315
[2025-12-14 22:28:29] 2025-12-15 06:27:34,656 | INFO     | corecount: 12
[2025-12-14 22:28:29] 2025-12-15 06:27:34,656 | INFO     | event service: False
[2025-12-14 22:28:29] 2025-12-15 06:27:34,656 | INFO     | sizes: {0: 2283954, 9: 2284216, 11: 2284244, 41: 2307488, 42: 2311812, 46: 2311812, 173: 2312106}
[2025-12-14 22:28:29] 2025-12-15 06:27:34,656 | INFO     | --------------------------------------------------
[2025-12-14 22:28:29] 2025-12-15 06:27:34,656 | INFO     | 
[2025-12-14 22:28:29] 2025-12-15 06:27:34,656 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-14 22:28:29] 2025-12-15 06:27:34,671 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 22:28:29] 2025-12-15 06:27:34,671 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 22:28:29] 2025-12-15 06:27:34,671 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 22:28:29] 2025-12-15 06:27:34,671 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 22:28:29] 2025-12-15 06:27:34,671 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 22:28:29] 2025-12-15 06:27:34,672 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 22:28:29] 2025-12-15 06:27:34,672 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 22:28:29] 2025-12-15 06:27:34,672 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 22:28:29] 2025-12-15 06:27:34,672 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 22:28:29] 2025-12-15 06:27:34,672 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 22:28:29] 2025-12-15 06:27:34,672 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 22:28:29] 2025-12-15 06:27:34,672 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 22:28:29] 2025-12-15 06:27:34,672 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 22:28:29] 2025-12-15 06:27:34,672 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 22:28:29] 2025-12-15 06:27:34,672 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 22:28:29] 2025-12-15 06:27:34,672 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 22:28:29] 2025-12-15 06:27:34,672 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 22:28:29] 2025-12-15 06:27:34,672 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 22:28:29] 2025-12-15 06:27:34,672 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 22:28:29] 2025-12-15 06:27:34,672 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 22:28:29] 2025-12-15 06:27:34,672 | INFO     | job 6929467602 has completed (purged errors)
[2025-12-14 22:28:29] 2025-12-15 06:27:34,672 | INFO     | overall cleanup function is called
[2025-12-14 22:28:29] 2025-12-15 06:27:35,679 | INFO     | --- collectZombieJob: --- 10, [1273315]
[2025-12-14 22:28:29] 2025-12-15 06:27:35,679 | INFO     | zombie collector waiting for pid 1273315
[2025-12-14 22:28:29] 2025-12-15 06:27:35,679 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 22:28:29] 2025-12-15 06:27:35,679 | INFO     | collected zombie processes
[2025-12-14 22:28:29] 2025-12-15 06:27:35,679 | INFO     | will attempt to kill all subprocesses of pid=1273315
[2025-12-14 22:28:29] 2025-12-15 06:27:35,930 | INFO     | process IDs to be killed: [1273315] (in reverse order)
[2025-12-14 22:28:29] 2025-12-15 06:27:35,984 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 22:28:29] 2025-12-15 06:27:35,984 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 22:28:29] 2025-12-15 06:27:35,991 | INFO     | did not find any defunct processes belonging to 1273315
[2025-12-14 22:28:29] 2025-12-15 06:27:35,996 | INFO     | did not find any defunct processes belonging to 1273315
[2025-12-14 22:28:29] 2025-12-15 06:27:35,996 | INFO     | ready for new job
[2025-12-14 22:28:29] 2025-12-15 06:27:35,997 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 22:28:29] 2025-12-15 06:27:35,997 | INFO     | ***************************************
[2025-12-14 22:28:29] 2025-12-15 06:27:35,998 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 22:28:29] 2025-12-15 06:27:35,998 | INFO     | ***************************************
[2025-12-14 22:28:29] 2025-12-15 06:27:35,998 | INFO     | 
[2025-12-14 22:28:29] 2025-12-15 06:27:35,999 | INFO     | architecture information:
[2025-12-14 22:28:29] 2025-12-15 06:27:35,999 | INFO     | executing command: cat /etc/os-release
[2025-12-14 22:28:29] 2025-12-15 06:27:36,010 | INFO     | cat /etc/os-release:
[2025-12-14 22:28:29] NAME="CentOS Linux"
[2025-12-14 22:28:29] VERSION="7 (Core)"
[2025-12-14 22:28:29] ID="centos"
[2025-12-14 22:28:29] ID_LIKE="rhel fedora"
[2025-12-14 22:28:29] VERSION_ID="7"
[2025-12-14 22:28:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 22:28:29] ANSI_COLOR="0;31"
[2025-12-14 22:28:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 22:28:29] HOME_URL="https://www.centos.org/"
[2025-12-14 22:28:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 22:28:29] 
[2025-12-14 22:28:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 22:28:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 22:28:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 22:28:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 22:28:29] 
[2025-12-14 22:28:29] 2025-12-15 06:27:36,010 | INFO     | ***************************************
[2025-12-14 22:28:29] 2025-12-15 06:27:36,513 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-14 22:28:29] 2025-12-15 06:27:36,533 | INFO     | sufficient remaining disk space (2304271974400 B)
[2025-12-14 22:28:29] 2025-12-15 06:27:36,533 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 22:28:29] 2025-12-15 06:27:36,533 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 22:28:29] 2025-12-15 06:27:36,533 | INFO     | update_server=False
[2025-12-14 22:28:29] 2025-12-15 06:27:36,533 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 22:28:29] 2025-12-15 06:27:36,534 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 22:28:29] 2025-12-15 06:27:36,673 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 22:28:29] 2025-12-15 06:27:36,926 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-14 22:28:29] 2025-12-15 06:27:36,926 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-14 22:28:29] 2025-12-15 06:27:36,926 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 22:28:29] 2025-12-15 06:27:36,926 | INFO     | will abort loop
[2025-12-14 22:28:29] 2025-12-15 06:27:36,990 | INFO     | all data control threads have been joined
[2025-12-14 22:28:29] 2025-12-15 06:27:37,275 | INFO     | all payload control threads have been joined
[2025-12-14 22:28:29] 2025-12-15 06:27:37,356 | INFO     | all job control threads have been joined
[2025-12-14 22:28:29] 2025-12-15 06:27:37,539 | INFO     | [job] retrieve thread has finished
[2025-12-14 22:28:29] 2025-12-15 06:27:37,540 | INFO     | [job] queue monitor thread has finished
[2025-12-14 22:28:29] 2025-12-15 06:27:37,573 | INFO     | [data] copytool_in thread has finished
[2025-12-14 22:28:29] 2025-12-15 06:27:37,932 | INFO     | [job] job monitor thread has finished
[2025-12-14 22:28:29] 2025-12-15 06:27:37,996 | INFO     | [data] control thread has finished
[2025-12-14 22:28:29] 2025-12-15 06:27:38,133 | INFO     | [payload] validate_post thread has finished
[2025-12-14 22:28:29] 2025-12-15 06:27:38,281 | INFO     | [payload] control thread has finished
[2025-12-14 22:28:29] 2025-12-15 06:27:38,363 | INFO     | [job] control thread has finished
[2025-12-14 22:28:29] 2025-12-15 06:27:38,562 | INFO     | [job] validate thread has finished
[2025-12-14 22:28:29] 2025-12-15 06:27:38,680 | INFO     | [data] copytool_out thread has finished
[2025-12-14 22:28:29] 2025-12-15 06:27:38,725 | INFO     | [payload] failed_post thread has finished
[2025-12-14 22:28:29] 2025-12-15 06:27:38,728 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 22:28:29] 2025-12-15 06:27:38,840 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 22:28:29] 2025-12-15 06:27:38,879 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 22:28:29] 2025-12-15 06:27:39,037 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 22:28:29] 2025-12-15 06:27:39,084 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 22:28:29] 2025-12-15 06:27:43,093 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 22:28:29] 2025-12-15 06:28:06,716 | INFO     | PID=1266650 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 22:28:29] 2025-12-15 06:28:06,716 | INFO     | .. there are 35 such processes running
[2025-12-14 22:28:29] 2025-12-15 06:28:06,716 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 22:28:29] 2025-12-15 06:28:06,716 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 22:28:29] 2025-12-15 06:28:06,717 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 22:28:29] 2025-12-15 06:28:21,522 | INFO     | [monitor] cgroup control has ended
[2025-12-14 22:28:29] 2025-12-15 06:28:23,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140080880793408)>', '<ExcThread(monitor, started 140080173782784)>']
[2025-12-14 22:28:29] 2025-12-15 06:28:23,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 22:28:29] 2025-12-15 06:28:23,816 | INFO     | [monitor] control thread has ended
[2025-12-14 22:28:29] 2025-12-15 06:28:28,455 | INFO     | all workflow threads have been joined
[2025-12-14 22:28:29] 2025-12-15 06:28:28,455 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 22:28:29] 2025-12-15 06:28:28,455 | INFO     | traces error code: 0
[2025-12-14 22:28:29] 2025-12-15 06:28:28,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 22:28:29] 2025-12-15 06:28:28,784 [wrapper] ==== pilot stdout END ====
[2025-12-14 22:28:29] 2025-12-15 06:28:28,798 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 22:28:29] 2025-12-15 06:28:28,808 [wrapper] pilotpid: 1266650
[2025-12-14 22:28:29] 2025-12-15 06:28:28,814 [wrapper] Pilot exit status: 0
[2025-12-14 22:28:29] 2025-12-15 06:28:28,863 [wrapper] pandaids: 6929467602
[2025-12-14 22:28:29] 2025-12-15 06:28:28,924 [wrapper] cleanup supervisor_pilot 1266656 1266651
[2025-12-14 22:28:29] 2025-12-15 06:28:28,926 [wrapper] Test setup, not cleaning
[2025-12-14 22:28:29] 2025-12-15 06:28:28,928 [wrapper] apfmon messages muted
[2025-12-14 22:28:29] 2025-12-15 06:28:28,937 [wrapper] ==== wrapper stdout END ====
[2025-12-14 22:28:29] 2025-12-15 06:28:28,938 [wrapper] ==== wrapper stderr END ====
[2025-12-14 22:28:29]  *** Error codes and diagnostics ***
[2025-12-14 22:28:29]     "exeErrorCode": 65,
[2025-12-14 22:28:29]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-14 22:28:29]     "pilotErrorCode": 1305,
[2025-12-14 22:28:29]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-14 22:28:29]  *** Listing of results directory ***
[2025-12-14 22:28:29] total 225096
[2025-12-14 22:28:29] -rw-r--r--. 1 boinc boinc    579449 Dec 14 12:38 pilot3.tar.gz
[2025-12-14 22:28:29] -rwx------. 1 boinc boinc     36322 Dec 14 12:41 runpilot2-wrapper.sh
[2025-12-14 22:28:29] -rw-r--r--. 1 boinc boinc      5112 Dec 14 12:43 queuedata.json
[2025-12-14 22:28:29] -rw-r--r--. 1 boinc boinc       100 Dec 14 22:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 22:28:29] -rwxr-xr-x. 1 boinc boinc      7986 Dec 14 22:23 run_atlas
[2025-12-14 22:28:29] -rw-r--r--. 1 boinc boinc       105 Dec 14 22:23 job.xml
[2025-12-14 22:28:29] -rw-r--r--. 2 boinc boinc 226394733 Dec 14 22:23 EVNT.47898761._000561.pool.root.1
[2025-12-14 22:28:29] -rw-r--r--. 2 boinc boinc     15847 Dec 14 22:23 start_atlas.sh
[2025-12-14 22:28:29] drwxrwx--x. 2 boinc boinc      4096 Dec 14 22:23 shared
[2025-12-14 22:28:29] -rw-r--r--. 2 boinc boinc    592400 Dec 14 22:23 input.tar.gz
[2025-12-14 22:28:29] -rw-r--r--. 1 boinc boinc      6629 Dec 14 22:23 init_data.xml
[2025-12-14 22:28:29] -rw-r--r--. 1 boinc boinc         0 Dec 14 22:23 boinc_lockfile
[2025-12-14 22:28:29] -rw-r--r--. 1 boinc boinc      2507 Dec 14 22:23 pandaJob.out
[2025-12-14 22:28:29] -rw-------. 1 boinc boinc    991016 Dec 14 22:24 agis_schedconf.cvmfs.json
[2025-12-14 22:28:29] -rw-------. 1 boinc boinc   1516240 Dec 14 22:24 agis_ddmendpoints.agis.ALL.json
[2025-12-14 22:28:29] drwx------. 5 boinc boinc      4096 Dec 14 22:24 pilot3
[2025-12-14 22:28:29] -rw-r--r--. 1 boinc boinc       522 Dec 14 22:25 boinc_task_state.xml
[2025-12-14 22:28:29] -rw-------. 1 boinc boinc       956 Dec 14 22:25 memory_monitor_summary.json
[2025-12-14 22:28:29] -rw-------. 1 boinc boinc     20976 Dec 14 22:25 log.47898763._012765.job.log.tgz.1
[2025-12-14 22:28:29] -rw-------. 1 boinc boinc        95 Dec 14 22:27 pilot_heartbeat.json
[2025-12-14 22:28:29] -rw-------. 1 boinc boinc      8378 Dec 14 22:27 heartbeat.json
[2025-12-14 22:28:29] -rw-r--r--. 1 boinc boinc      8192 Dec 14 22:28 boinc_mmap_file
[2025-12-14 22:28:29] -rw-r--r--. 1 boinc boinc        22 Dec 14 22:28 wrapper_checkpoint.txt
[2025-12-14 22:28:29] -rw-------. 1 boinc boinc      5009 Dec 14 22:28 pilotlog.txt
[2025-12-14 22:28:29] -rw-------. 1 boinc boinc     85941 Dec 14 22:28 log.47898763._012765.job.log.1
[2025-12-14 22:28:29] -rw-------. 1 boinc boinc       188 Dec 14 22:28 output.list
[2025-12-14 22:28:29] -rw-r--r--. 1 boinc boinc       620 Dec 14 22:28 runtime_log
[2025-12-14 22:28:29] -rw-------. 1 boinc boinc    122880 Dec 14 22:28 result.tar.gz
[2025-12-14 22:28:29] -rw-r--r--. 1 boinc boinc      8636 Dec 14 22:28 runtime_log.err
[2025-12-14 22:28:29] -rw-------. 1 boinc boinc       645 Dec 14 22:28 pumMDmI57o8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpQWKDmIr4XCo.diag
[2025-12-14 22:28:29] -rw-r--r--. 1 boinc boinc      2142 Dec 14 22:28 stderr.txt
[2025-12-14 22:28:29] No HITS result produced
[2025-12-14 22:28:29]  *** Contents of shared directory: ***
[2025-12-14 22:28:29] total 221812
[2025-12-14 22:28:29] -rw-r--r--. 2 boinc boinc 226394733 Dec 14 22:23 ATLAS.root_0
[2025-12-14 22:28:29] -rw-r--r--. 2 boinc boinc     15847 Dec 14 22:23 start_atlas.sh
[2025-12-14 22:28:29] -rw-r--r--. 2 boinc boinc    592400 Dec 14 22:23 input.tar.gz
[2025-12-14 22:28:29] -rw-------. 1 boinc boinc    122880 Dec 14 22:28 result.tar.gz
22:28:30 (1262699): run_atlas exited; CPU time 19.968320
22:28:30 (1262699): called boinc_finish(0)

</stderr_txt>
]]>

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