Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:04:05 (939125): wrapper (7.7.26015): starting
04:04:05 (939125): wrapper: running run_atlas (--nthreads 8)
[2025-12-15 04:04:05] Arguments: --nthreads 8
[2025-12-15 04:04:05] Threads: 8
[2025-12-15 04:04:05] Checking for CVMFS
[2025-12-15 04:04:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 04:04:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 04:04:07] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 04:04:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 04:04:09] 2.13.3.0 12022 57070 358956 154025 3 636 31716038 32935937 36717 16776704 0 120556090 99.509 148188793 12191 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-15 04:04:09] CVMFS is ok
[2025-12-15 04:04:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 04:04:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 04:04:09] Further information can be found at the LHC@home message board.
[2025-12-15 04:04:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 04:04:09] Checking for apptainer binary...
[2025-12-15 04:04:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 04:04:09] Running /usr/bin/apptainer --version
[2025-12-15 04:04:09] apptainer version 1.4.5-2.el9
[2025-12-15 04:04:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 04:04:11] c6-12-25-4.aglt2.org
[2025-12-15 04:04:11] apptainer works
[2025-12-15 04:04:11] Set ATHENA_PROC_NUMBER=8
[2025-12-15 04:04:11] Set ATHENA_CORE_NUMBER=8
[2025-12-15 04:04:12] Starting ATLAS job with PandaID=6931151749
[2025-12-15 04:04:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 16:44:41]  *** The last 200 lines of the pilot log: ***
[2025-12-15 16:44:41] 2025-12-15 21:43:45,211 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 999.999395833334
[2025-12-15 16:44:41] 2025-12-15 21:43:45,417 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6931151749/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 16:44:41] 2025-12-15 21:43:45,439 | INFO     | extracted standard info from prmon json
[2025-12-15 16:44:41] 2025-12-15 21:43:45,440 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 16:44:41] 2025-12-15 21:43:45,440 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 16:44:41] 2025-12-15 21:43:45,441 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 16:44:41] 2025-12-15 21:43:45,441 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 16:44:41] 2025-12-15 21:43:45,669 | INFO     | fitting pss+swap vs Time
[2025-12-15 16:44:41] 2025-12-15 21:43:45,676 | INFO     | sum of square deviations: 126171462456.8828
[2025-12-15 16:44:41] 2025-12-15 21:43:45,844 | INFO     | sum of deviations: 275035638132.4173
[2025-12-15 16:44:41] 2025-12-15 21:43:45,845 | INFO     | mean x: 1765812324.522267
[2025-12-15 16:44:41] 2025-12-15 21:43:45,845 | INFO     | mean y: 2480029.4898785427
[2025-12-15 16:44:41] 2025-12-15 21:43:45,846 | INFO     | intersect: -3846736822.2450085
[2025-12-15 16:44:41] 2025-12-15 21:43:45,875 | INFO     | chi2: 5.678555870901557
[2025-12-15 16:44:41] 2025-12-15 21:43:45,894 | INFO     | sum of square deviations: 123634998635.34222
[2025-12-15 16:44:41] 2025-12-15 21:43:46,193 | INFO     | sum of deviations: 415980624992.80963
[2025-12-15 16:44:41] 2025-12-15 21:43:46,194 | INFO     | mean x: 1765812172.0298913
[2025-12-15 16:44:41] 2025-12-15 21:43:46,194 | INFO     | mean y: 2488479.372282609
[2025-12-15 16:44:41] 2025-12-15 21:43:46,194 | INFO     | intersect: -5938738997.059529
[2025-12-15 16:44:41] 2025-12-15 21:43:46,201 | INFO     | chi2: 3.4431734583923697
[2025-12-15 16:44:41] 2025-12-15 21:43:46,201 | INFO     | current chi2=3.4431734583923697 (change=39.365332724185855 %)
[2025-12-15 16:44:41] 2025-12-15 21:43:46,204 | INFO     | sum of square deviations: 121132677855.8604
[2025-12-15 16:44:41] 2025-12-15 21:43:46,275 | INFO     | sum of deviations: 412536066417.9537
[2025-12-15 16:44:41] 2025-12-15 21:43:46,276 | INFO     | mean x: 1765812019.5348837
[2025-12-15 16:44:41] 2025-12-15 21:43:46,276 | INFO     | mean y: 2488269.452804378
[2025-12-15 16:44:41] 2025-12-15 21:43:46,276 | INFO     | intersect: -6011257628.572191
[2025-12-15 16:44:41] 2025-12-15 21:43:46,279 | INFO     | chi2: 3.4431046645116994
[2025-12-15 16:44:41] 2025-12-15 21:43:46,279 | INFO     | current chi2=3.4431046645116994 (change=0.0019979789430181797 %)
[2025-12-15 16:44:41] 2025-12-15 21:43:46,280 | INFO     | right removable region: 730
[2025-12-15 16:44:41] 2025-12-15 21:43:46,282 | INFO     | sum of square deviations: 123634491115.34222
[2025-12-15 16:44:41] 2025-12-15 21:43:46,312 | INFO     | sum of deviations: 69041112276.34262
[2025-12-15 16:44:41] 2025-12-15 21:43:46,313 | INFO     | mean x: 1765812477.0298913
[2025-12-15 16:44:41] 2025-12-15 21:43:46,313 | INFO     | mean y: 2492402.529891304
[2025-12-15 16:44:41] 2025-12-15 21:43:46,313 | INFO     | intersect: -983588879.3661985
[2025-12-15 16:44:41] 2025-12-15 21:43:46,316 | INFO     | chi2: 2.8363061200237993
[2025-12-15 16:44:41] 2025-12-15 21:43:46,316 | INFO     | current chi2=2.8363061200237993 (change=50.052333999956 %)
[2025-12-15 16:44:41] 2025-12-15 21:43:46,319 | INFO     | sum of square deviations: 121131843251.86044
[2025-12-15 16:44:41] 2025-12-15 21:43:46,349 | INFO     | sum of deviations: -3255144364.6975555
[2025-12-15 16:44:41] 2025-12-15 21:43:46,350 | INFO     | mean x: 1765812629.5348837
[2025-12-15 16:44:41] 2025-12-15 21:43:46,350 | INFO     | mean y: 2496800.0861833105
[2025-12-15 16:44:41] 2025-12-15 21:43:46,350 | INFO     | intersect: 49949021.36701457
[2025-12-15 16:44:41] 2025-12-15 21:43:46,353 | INFO     | chi2: 2.423042980177551
[2025-12-15 16:44:41] 2025-12-15 21:43:46,353 | INFO     | current chi2=2.423042980177551 (change=14.570470265134174 %)
[2025-12-15 16:44:41] 2025-12-15 21:43:46,354 | INFO     | left removable region: 20
[2025-12-15 16:44:41] 2025-12-15 21:43:46,356 | INFO     | sum of square deviations: 110989880954.39586
[2025-12-15 16:44:41] 2025-12-15 21:43:46,465 | INFO     | sum of deviations: 115093743405.00972
[2025-12-15 16:44:41] 2025-12-15 21:43:46,466 | INFO     | mean x: 1765812599.0605633
[2025-12-15 16:44:41] 2025-12-15 21:43:46,466 | INFO     | mean y: 2506686.3253521128
[2025-12-15 16:44:41] 2025-12-15 21:43:46,466 | INFO     | intersect: -1828597018.1746616
[2025-12-15 16:44:41] 2025-12-15 21:43:46,473 | INFO     | chi2: 0.12271916266317
[2025-12-15 16:44:41] 2025-12-15 21:43:46,473 | INFO     | current memory leak: 1.04 B/s (using 710 data points, chi2=0.12)
[2025-12-15 16:44:41] 2025-12-15 21:43:46,479 | INFO     | could have reported an average CPU frequency of 999 MHz (28 samples)
[2025-12-15 16:44:41] 2025-12-15 21:43:46,480 | INFO     | ..............................
[2025-12-15 16:44:41] 2025-12-15 21:43:46,480 | INFO     | . Timing measurements:
[2025-12-15 16:44:41] 2025-12-15 21:43:46,480 | INFO     | . get job = 0 s
[2025-12-15 16:44:41] 2025-12-15 21:43:46,480 | INFO     | . initial setup = 5 s
[2025-12-15 16:44:41] 2025-12-15 21:43:46,480 | INFO     | . payload setup = 61 s
[2025-12-15 16:44:41] 2025-12-15 21:43:46,481 | INFO     | . stage-in = 1 s
[2025-12-15 16:44:41] 2025-12-15 21:43:46,481 | INFO     | . payload execution = 45235 s
[2025-12-15 16:44:41] 2025-12-15 21:43:46,481 | INFO     | . stage-out = 20 s
[2025-12-15 16:44:41] 2025-12-15 21:43:46,481 | INFO     | . log creation = 2 s
[2025-12-15 16:44:41] 2025-12-15 21:43:46,481 | INFO     | ..............................
[2025-12-15 16:44:41] 2025-12-15 21:43:46,846 | INFO     | time since job start (45482s) is within the limit (174528.0s)
[2025-12-15 16:44:41] 2025-12-15 21:43:46,871 | INFO     | 
[2025-12-15 16:44:41] 2025-12-15 21:43:46,872 | INFO     | job summary report
[2025-12-15 16:44:41] 2025-12-15 21:43:46,872 | INFO     | --------------------------------------------------
[2025-12-15 16:44:41] 2025-12-15 21:43:46,872 | INFO     | PanDA job id: 6931151749
[2025-12-15 16:44:41] 2025-12-15 21:43:46,872 | INFO     | task id: 47898878
[2025-12-15 16:44:41] 2025-12-15 21:43:46,872 | INFO     | errors: (none)
[2025-12-15 16:44:41] 2025-12-15 21:43:46,873 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 16:44:41] 2025-12-15 21:43:46,873 | INFO     | pilot state: finished 
[2025-12-15 16:44:41] 2025-12-15 21:43:46,873 | INFO     | transexitcode: 0
[2025-12-15 16:44:41] 2025-12-15 21:43:46,873 | INFO     | exeerrorcode: 0
[2025-12-15 16:44:41] 2025-12-15 21:43:46,873 | INFO     | exeerrordiag: 
[2025-12-15 16:44:41] 2025-12-15 21:43:46,873 | INFO     | exitcode: 0
[2025-12-15 16:44:41] 2025-12-15 21:43:46,874 | INFO     | exitmsg: OK
[2025-12-15 16:44:41] 2025-12-15 21:43:46,874 | INFO     | cpuconsumptiontime: 105158 s
[2025-12-15 16:44:41] 2025-12-15 21:43:46,874 | INFO     | nevents: 400
[2025-12-15 16:44:41] 2025-12-15 21:43:46,874 | INFO     | neventsw: 0
[2025-12-15 16:44:41] 2025-12-15 21:43:46,874 | INFO     | pid: 996174
[2025-12-15 16:44:41] 2025-12-15 21:43:46,896 | INFO     | pgrp: 996174
[2025-12-15 16:44:41] 2025-12-15 21:43:46,896 | INFO     | corecount: 8
[2025-12-15 16:44:41] 2025-12-15 21:43:46,896 | INFO     | event service: False
[2025-12-15 16:44:41] 2025-12-15 21:43:46,921 | INFO     | sizes: {0: 2283064, 1: 2283665, 3: 2283749, 6: 2283805, 8: 2283976, 9: 2284004, 10: 2284160, 22: 2284188, 34: 2284216, 46: 2284244, 53: 2284534, 57: 2284842, 45306
[2025-12-15 16:44:41] 2025-12-15 21:43:46,921 | INFO     | --------------------------------------------------
[2025-12-15 16:44:41] 2025-12-15 21:43:46,921 | INFO     | 
[2025-12-15 16:44:41] 2025-12-15 21:43:46,922 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-15 16:44:41] 2025-12-15 21:43:47,184 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 16:44:41] 2025-12-15 21:43:47,185 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 16:44:41] 2025-12-15 21:43:47,185 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 16:44:41] 2025-12-15 21:43:47,185 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 16:44:41] 2025-12-15 21:43:47,186 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 16:44:41] 2025-12-15 21:43:47,186 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 16:44:41] 2025-12-15 21:43:47,186 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 16:44:41] 2025-12-15 21:43:47,186 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 16:44:41] 2025-12-15 21:43:47,187 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 16:44:41] 2025-12-15 21:43:47,187 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 16:44:41] 2025-12-15 21:43:47,187 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 16:44:41] 2025-12-15 21:43:47,187 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 16:44:41] 2025-12-15 21:43:47,187 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 16:44:41] 2025-12-15 21:43:47,192 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 16:44:41] 2025-12-15 21:43:47,192 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 16:44:41] 2025-12-15 21:43:47,192 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 16:44:41] 2025-12-15 21:43:47,193 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 16:44:41] 2025-12-15 21:43:47,193 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 16:44:41] 2025-12-15 21:43:47,193 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 16:44:41] 2025-12-15 21:43:47,193 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 16:44:41] 2025-12-15 21:43:47,194 | INFO     | job 6931151749 has completed (purged errors)
[2025-12-15 16:44:41] 2025-12-15 21:43:47,194 | INFO     | overall cleanup function is called
[2025-12-15 16:44:41] 2025-12-15 21:43:48,214 | INFO     | --- collectZombieJob: --- 10, [996174]
[2025-12-15 16:44:41] 2025-12-15 21:43:48,214 | INFO     | zombie collector waiting for pid 996174
[2025-12-15 16:44:41] 2025-12-15 21:43:48,214 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 16:44:41] 2025-12-15 21:43:48,215 | INFO     | collected zombie processes
[2025-12-15 16:44:41] 2025-12-15 21:43:48,215 | INFO     | will attempt to kill all subprocesses of pid=996174
[2025-12-15 16:44:41] 2025-12-15 21:43:57,924 | INFO     | process IDs to be killed: [996174] (in reverse order)
[2025-12-15 16:44:41] 2025-12-15 21:43:58,721 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 16:44:41] 2025-12-15 21:43:58,722 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 16:44:41] 2025-12-15 21:43:58,988 | INFO     | did not find any defunct processes belonging to 996174
[2025-12-15 16:44:41] 2025-12-15 21:43:59,086 | INFO     | did not find any defunct processes belonging to 996174
[2025-12-15 16:44:41] 2025-12-15 21:43:59,098 | INFO     | ready for new job
[2025-12-15 16:44:41] 2025-12-15 21:43:59,099 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 16:44:41] 2025-12-15 21:43:59,127 | INFO     | ***************************************
[2025-12-15 16:44:41] 2025-12-15 21:43:59,144 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 16:44:41] 2025-12-15 21:43:59,144 | INFO     | ***************************************
[2025-12-15 16:44:41] 2025-12-15 21:43:59,144 | INFO     | 
[2025-12-15 16:44:41] 2025-12-15 21:43:59,184 | INFO     | architecture information:
[2025-12-15 16:44:41] 2025-12-15 21:43:59,189 | INFO     | executing command: cat /etc/os-release
[2025-12-15 16:44:41] 2025-12-15 21:43:59,371 | INFO     | cat /etc/os-release:
[2025-12-15 16:44:41] NAME="CentOS Linux"
[2025-12-15 16:44:41] VERSION="7 (Core)"
[2025-12-15 16:44:41] ID="centos"
[2025-12-15 16:44:41] ID_LIKE="rhel fedora"
[2025-12-15 16:44:41] VERSION_ID="7"
[2025-12-15 16:44:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 16:44:41] ANSI_COLOR="0;31"
[2025-12-15 16:44:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 16:44:41] HOME_URL="https://www.centos.org/"
[2025-12-15 16:44:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 16:44:41] 
[2025-12-15 16:44:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 16:44:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 16:44:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 16:44:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 16:44:41] 
[2025-12-15 16:44:41] 2025-12-15 21:43:59,372 | INFO     | ***************************************
[2025-12-15 16:44:41] 2025-12-15 21:43:59,883 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-15 16:44:41] 2025-12-15 21:44:00,045 | INFO     | sufficient remaining disk space (94247059456 B)
[2025-12-15 16:44:41] 2025-12-15 21:44:00,046 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 16:44:41] 2025-12-15 21:44:00,047 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 16:44:41] 2025-12-15 21:44:00,047 | INFO     | update_server=False
[2025-12-15 16:44:41] 2025-12-15 21:44:00,047 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 16:44:41] 2025-12-15 21:44:00,062 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 16:44:41] 2025-12-15 21:44:00,068 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 16:44:41] 2025-12-15 21:44:00,075 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-15 16:44:41] 2025-12-15 21:44:00,075 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-15 16:44:41] 2025-12-15 21:44:00,076 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 16:44:41] 2025-12-15 21:44:00,076 | INFO     | will abort loop
[2025-12-15 16:44:41] 2025-12-15 21:44:00,382 | INFO     | all data control threads have been joined
[2025-12-15 16:44:41] 2025-12-15 21:44:00,668 | INFO     | all job control threads have been joined
[2025-12-15 16:44:41] 2025-12-15 21:44:01,053 | INFO     | [job] retrieve thread has finished
[2025-12-15 16:44:41] 2025-12-15 21:44:01,067 | INFO     | [job] queue monitor thread has finished
[2025-12-15 16:44:41] 2025-12-15 21:44:01,103 | INFO     | [job] job monitor thread has finished
[2025-12-15 16:44:41] 2025-12-15 21:44:01,110 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 16:44:41] 2025-12-15 21:44:01,212 | INFO     | all payload control threads have been joined
[2025-12-15 16:44:41] 2025-12-15 21:44:01,388 | INFO     | [data] control thread has finished
[2025-12-15 16:44:41] 2025-12-15 21:44:01,674 | INFO     | [job] control thread has finished
[2025-12-15 16:44:41] 2025-12-15 21:44:02,084 | INFO     | [data] copytool_out thread has finished
[2025-12-15 16:44:41] 2025-12-15 21:44:02,143 | INFO     | [job] validate thread has finished
[2025-12-15 16:44:41] 2025-12-15 21:44:02,144 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 16:44:41] 2025-12-15 21:44:02,152 | INFO     | [data] copytool_in thread has finished
[2025-12-15 16:44:41] 2025-12-15 21:44:02,176 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 16:44:41] 2025-12-15 21:44:02,177 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 16:44:41] 2025-12-15 21:44:02,208 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 16:44:41] 2025-12-15 21:44:02,218 | INFO     | [payload] control thread has finished
[2025-12-15 16:44:41] 2025-12-15 21:44:02,249 | INFO     | [payload] failed_post thread has finished
[2025-12-15 16:44:41] 2025-12-15 21:44:02,254 | INFO     | [payload] validate_post thread has finished
[2025-12-15 16:44:41] 2025-12-15 21:44:05,130 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 16:44:41] 2025-12-15 21:44:14,014 | INFO     | [monitor] cgroup control has ended
[2025-12-15 16:44:41] 2025-12-15 21:44:15,500 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140105986950976)>', '<ExcThread(monitor, started 140105482217216)>']
[2025-12-15 16:44:41] 2025-12-15 21:44:20,526 | INFO     | all workflow threads have been joined
[2025-12-15 16:44:41] 2025-12-15 21:44:20,526 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 16:44:41] 2025-12-15 21:44:20,527 | INFO     | traces error code: 0
[2025-12-15 16:44:41] 2025-12-15 21:44:20,527 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 16:44:41] 2025-12-15 21:44:36,513 | INFO     | PID=956902 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-15 16:44:41] 2025-12-15 21:44:36,514 | INFO     | .. there are 45 such processes running
[2025-12-15 16:44:41] 2025-12-15 21:44:36,516 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 16:44:41] 2025-12-15 21:44:36,516 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 16:44:41] 2025-12-15 21:44:36,533 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 16:44:41] 2025-12-15 21:44:36,533 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 16:44:41] 2025-12-15 21:44:36,533 | INFO     | [monitor] control thread has ended
[2025-12-15 16:44:41] 2025-12-15 21:44:39,543 [wrapper] ==== pilot stdout END ====
[2025-12-15 16:44:41] 2025-12-15 21:44:39,578 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 16:44:41] 2025-12-15 21:44:39,606 [wrapper] pilotpid: 956902
[2025-12-15 16:44:41] 2025-12-15 21:44:39,629 [wrapper] Pilot exit status: 0
[2025-12-15 16:44:41] 2025-12-15 21:44:39,659 [wrapper] pandaids: 6931151749
[2025-12-15 16:44:41] 2025-12-15 21:44:39,958 [wrapper] cleanup supervisor_pilot 4066954 956903
[2025-12-15 16:44:41] 2025-12-15 21:44:39,981 [wrapper] Test setup, not cleaning
[2025-12-15 16:44:41] 2025-12-15 21:44:39,995 [wrapper] apfmon messages muted
[2025-12-15 16:44:41] 2025-12-15 21:44:40,006 [wrapper] ==== wrapper stdout END ====
[2025-12-15 16:44:41] 2025-12-15 21:44:40,019 [wrapper] ==== wrapper stderr END ====
[2025-12-15 16:44:41]  *** Error codes and diagnostics ***
[2025-12-15 16:44:41]     "exeErrorCode": 0,
[2025-12-15 16:44:41]     "exeErrorDiag": "",
[2025-12-15 16:44:41]     "pilotErrorCode": 0,
[2025-12-15 16:44:41]     "pilotErrorDiag": "",
[2025-12-15 16:44:41]  *** Listing of results directory ***
[2025-12-15 16:44:41] total 375580
[2025-12-15 16:44:41] -rw-r--r--. 1 boincer umatlas    579449 Dec 14 20:16 pilot3.tar.gz
[2025-12-15 16:44:41] -rwx------. 1 boincer umatlas     36322 Dec 14 20:17 runpilot2-wrapper.sh
[2025-12-15 16:44:41] -rw-r--r--. 1 boincer umatlas      5112 Dec 14 20:19 queuedata.json
[2025-12-15 16:44:41] -rw-r--r--. 1 boincer umatlas       100 Dec 15 04:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 16:44:41] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 15 04:04 run_atlas
[2025-12-15 16:44:41] -rw-r--r--. 1 boincer umatlas       105 Dec 15 04:04 job.xml
[2025-12-15 16:44:41] -rw-r--r--. 2 boincer umatlas 195938840 Dec 15 04:04 EVNT.47898875._000092.pool.root.1
[2025-12-15 16:44:41] -rw-r--r--. 2 boincer umatlas    592397 Dec 15 04:04 input.tar.gz
[2025-12-15 16:44:41] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 04:04 start_atlas.sh
[2025-12-15 16:44:41] drwxrwx--x. 2 boincer umatlas      4096 Dec 15 04:04 shared
[2025-12-15 16:44:41] -rw-r--r--. 1 boincer umatlas         0 Dec 15 04:04 boinc_lockfile
[2025-12-15 16:44:41] -rw-r--r--. 1 boincer umatlas      2499 Dec 15 04:04 pandaJob.out
[2025-12-15 16:44:41] -rw-------. 1 boincer umatlas        57 Dec 15 04:04 setup.sh.local
[2025-12-15 16:44:41] -rw-------. 1 boincer umatlas    991016 Dec 15 04:05 agis_schedconf.cvmfs.json
[2025-12-15 16:44:41] drwx------. 5 boincer umatlas      4096 Dec 15 04:05 pilot3
[2025-12-15 16:44:41] -rw-r--r--. 1 boincer umatlas      6880 Dec 15 16:37 init_data.xml
[2025-12-15 16:44:41] -rw-------. 1 boincer umatlas 175651749 Dec 15 16:38 HITS.47898878._002315.pool.root.1
[2025-12-15 16:44:41] -rw-r--r--. 1 boincer umatlas       532 Dec 15 16:38 boinc_task_state.xml
[2025-12-15 16:44:41] -rw-------. 1 boincer umatlas      1045 Dec 15 16:42 memory_monitor_summary.json
[2025-12-15 16:44:41] -rw-------. 1 boincer umatlas   1516240 Dec 15 16:42 agis_ddmendpoints.agis.ALL.json
[2025-12-15 16:44:41] -rw-------. 1 boincer umatlas    710669 Dec 15 16:42 log.47898878._002315.job.log.tgz.1
[2025-12-15 16:44:41] -rw-------. 1 boincer umatlas      7835 Dec 15 16:43 heartbeat.json
[2025-12-15 16:44:41] -rw-r--r--. 1 boincer umatlas        29 Dec 15 16:44 wrapper_checkpoint.txt
[2025-12-15 16:44:41] -rw-r--r--. 1 boincer umatlas      8192 Dec 15 16:44 boinc_mmap_file
[2025-12-15 16:44:41] -rw-------. 1 boincer umatlas        96 Dec 15 16:44 pilot_heartbeat.json
[2025-12-15 16:44:41] -rw-------. 1 boincer umatlas       822 Dec 15 16:44 pilotlog.txt
[2025-12-15 16:44:41] -rw-------. 1 boincer umatlas   3836460 Dec 15 16:44 log.47898878._002315.job.log.1
[2025-12-15 16:44:41] -rw-------. 1 boincer umatlas       357 Dec 15 16:44 output.list
[2025-12-15 16:44:41] -rw-r--r--. 1 boincer umatlas       620 Dec 15 16:44 runtime_log
[2025-12-15 16:44:41] -rw-------. 1 boincer umatlas   4567040 Dec 15 16:44 result.tar.gz
[2025-12-15 16:44:41] -rw-r--r--. 1 boincer umatlas      9353 Dec 15 16:44 runtime_log.err
[2025-12-15 16:44:41] -rw-------. 1 boincer umatlas       662 Dec 15 16:44 a7uLDmoOCp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdUSKDmwiRrfn.diag
[2025-12-15 16:44:41] -rw-r--r--. 1 boincer umatlas     21234 Dec 15 16:44 stderr.txt
[2025-12-15 16:44:41] HITS file was successfully produced:
[2025-12-15 16:44:41] -rw-------. 1 boincer umatlas 175651749 Dec 15 16:38 shared/HITS.pool.root.1
[2025-12-15 16:44:41]  *** Contents of shared directory: ***
[2025-12-15 16:44:41] total 367944
[2025-12-15 16:44:41] -rw-r--r--. 2 boincer umatlas 195938840 Dec 15 04:04 ATLAS.root_0
[2025-12-15 16:44:41] -rw-r--r--. 2 boincer umatlas    592397 Dec 15 04:04 input.tar.gz
[2025-12-15 16:44:41] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 04:04 start_atlas.sh
[2025-12-15 16:44:41] -rw-------. 1 boincer umatlas 175651749 Dec 15 16:38 HITS.pool.root.1
[2025-12-15 16:44:41] -rw-------. 1 boincer umatlas   4567040 Dec 15 16:44 result.tar.gz
16:44:42 (939125): run_atlas exited; CPU time 109170.765776
16:44:42 (939125): called boinc_finish(0)

</stderr_txt>
]]>

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