Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:12:40 (2549): wrapper (7.7.26015): starting
11:12:40 (2549): wrapper: running run_atlas (--nthreads 8)
[2025-12-15 11:12:40] Arguments: --nthreads 8
[2025-12-15 11:12:40] Threads: 8
[2025-12-15 11:12:40] Checking for CVMFS
[2025-12-15 11:12:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 11:12:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 11:12:40] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 11:12:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 11:12:46] 2.11.2.0 31633 312598 134468 154025 0 61 21715079 25165824 0 130560 27 151573294 99.881 85931667 2611 http://s1sampa-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://141.99.253.245:3128/ 0
[2025-12-15 11:12:46] CVMFS is ok
[2025-12-15 11:12:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 11:12:46] Checking for apptainer binary...
[2025-12-15 11:12:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 11:12:46] Running /usr/bin/apptainer --version
[2025-12-15 11:12:46] apptainer version 1.3.2-1.el7
[2025-12-15 11:12:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 11:12:47] cg-vwn483.simple-grid.lan
[2025-12-15 11:12:47] apptainer works
[2025-12-15 11:12:47] Set ATHENA_PROC_NUMBER=8
[2025-12-15 11:12:47] Set ATHENA_CORE_NUMBER=8
[2025-12-15 11:12:47] Starting ATLAS job with PandaID=6931151579
[2025-12-15 11:12:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 11:38:33]  *** The last 200 lines of the pilot log: ***
[2025-12-15 11:38:33] 2025-12-15 10:38:01,218 | INFO     | could have reported an average CPU frequency of 2249 MHz (4 samples)
[2025-12-15 11:38:33] 2025-12-15 10:38:01,218 | INFO     | ..............................
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . Timing measurements:
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . get job = 23 s
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . initial setup = 136 s
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . payload setup = 3 s
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . stage-in = 23 s
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . payload execution = 768 s
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . stage-out = 2 s
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . log creation = 0 s
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | ..............................
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/24/PanDA_Pilot-6931151579/pilotlog.txt
[2025-12-15 11:38:33] 2025-12-15 10:38:01,227 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-15 11:38:33] - Log from pilotlog.txt -
[2025-12-15 11:38:33] 2025-12-15 10:38:01,217 | INFO     | using path: /var/lib/boinc/slots/24/PanDA_Pilot-6931151579/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 11:38:33] 2025-12-15 10:38:01,218 | INFO     | extracted standard info from prmon json
[2025-12-15 11:38:33] 2025-12-15 10:38:01,218 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 11:38:33] 2025-12-15 10:38:01,218 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 11:38:33] 2025-12-15 10:38:01,218 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 11:38:33] 2025-12-15 10:38:01,218 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 11:38:33] 2025-12-15 10:38:01,218 | WARNING  | wrong length of table data, x=[1765794082.0, 1765794143.0, 1765794204.0, 1765794265.0, 1765794326.0, 1765794387.0], y=[478780.0, 478780.0, 478780.0, 478780.0, 4787
[2025-12-15 11:38:33] 2025-12-15 10:38:01,218 | INFO     | could have reported an average CPU frequency of 2249 MHz (4 samples)
[2025-12-15 11:38:33] 2025-12-15 10:38:01,218 | INFO     | ..............................
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . Timing measurements:
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . get job = 23 s
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . initial setup = 136 s
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . payload setup = 3 s
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . stage-in = 23 s
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . payload execution = 768 s
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . stage-out = 2 s
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . log creation = 0 s
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | ..............................
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/24/PanDA_Pilot-6931151579/pilotlog.txt
[2025-12-15 11:38:33] 2025-12-15 10:38:01,227 | WARNING  | 
[2025-12-15 11:38:33] [begin log extracts]
[2025-12-15 11:38:33] - Log from pilotlog.txt -
[2025-12-15 11:38:33] 2025-12-15 10:38:01,217 | INFO     | using path: /var/lib/boinc/slots/24/PanDA_Pilot-6931151579/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 11:38:33] 2025-12-15 10:38:01,218 | INFO     | extracted standard info from prmon json
[2025-12-15 11:38:33] 2025-12-15 10:38:01,218 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 11:38:33] 2025-12-15 10:38:01,218 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 11:38:33] 2025-12-15 10:38:01,218 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 11:38:33] 2025-12-15 10:38:01,218 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 11:38:33] 2025-12-15 10:38:01,218 | WARNING  | wrong length of table data, x=[1765794082.0, 1765794143.0, 1765794204.0, 1765794265.0, 1765794326.0, 1765794387.0], y=[478780.0, 478780.0, 478780.0, 478780.0, 4787
[2025-12-15 11:38:33] 2025-12-15 10:38:01,218 | INFO     | could have reported an average CPU frequency of 2249 MHz (4 samples)
[2025-12-15 11:38:33] 2025-12-15 10:38:01,218 | INFO     | ..............................
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . Timing measurements:
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . get job = 23 s
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . initial setup = 136 s
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . payload setup = 3 s
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . stage-in = 23 s
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . payload execution = 768 s
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . stage-out = 2 s
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | . log creation = 0 s
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | ..............................
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-15 11:38:33] 2025-12-15 10:38:01,219 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/24/PanDA_Pilot-6931151579/pilotlog.txt
[2025-12-15 11:38:33] [end log extracts]
[2025-12-15 11:38:33] 2025-12-15 10:38:01,227 | WARNING  | pilotErrorCodes = [1305, 1133, 1137] (will report primary/first error code)
[2025-12-15 11:38:33] 2025-12-15 10:38:01,227 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-15 11:38:33] 2025-12-15 10:38:01,230 | INFO     | 
[2025-12-15 11:38:33] 2025-12-15 10:38:01,230 | INFO     | job summary report
[2025-12-15 11:38:33] 2025-12-15 10:38:01,230 | INFO     | --------------------------------------------------
[2025-12-15 11:38:33] 2025-12-15 10:38:01,230 | INFO     | PanDA job id: 6931151579
[2025-12-15 11:38:33] 2025-12-15 10:38:01,230 | INFO     | task id: 47898896
[2025-12-15 11:38:33] 2025-12-15 10:38:01,230 | INFO     | error 1/3: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-15 10:28:57,886 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-15 11:38:33] 2025-12-15 10:38:01,230 | INFO     | error 2/3: 1133: Fetching default storage failed: no activity related storage defined: Failed to resolve output ddmendpoint by name=NDGF-T1_DATADISK (from PanDA), 
[2025-12-15 11:38:33] 2025-12-15 10:38:01,230 | INFO     | error 3/3: 1137: Failed to stage-out file
[2025-12-15 11:38:33] 2025-12-15 10:38:01,230 | INFO     | status: LOG_TRANSFER = FAILED 
[2025-12-15 11:38:33] 2025-12-15 10:38:01,230 | INFO     | pilot state: failed 
[2025-12-15 11:38:33] 2025-12-15 10:38:01,230 | INFO     | transexitcode: 65
[2025-12-15 11:38:33] 2025-12-15 10:38:01,230 | INFO     | exeerrorcode: 65
[2025-12-15 11:38:33] 2025-12-15 10:38:01,230 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-15 11:38:33] 2025-12-15 10:38:01,230 | INFO     | exitcode: 65
[2025-12-15 11:38:33] 2025-12-15 10:38:01,230 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-15 11:38:33] 2025-12-15 10:38:01,230 | INFO     | cpuconsumptiontime: 14 s
[2025-12-15 11:38:33] 2025-12-15 10:38:01,231 | INFO     | nevents: 0
[2025-12-15 11:38:33] 2025-12-15 10:38:01,231 | INFO     | neventsw: 0
[2025-12-15 11:38:33] 2025-12-15 10:38:01,231 | INFO     | pid: 12721
[2025-12-15 11:38:33] 2025-12-15 10:38:01,231 | INFO     | pgrp: 12721
[2025-12-15 11:38:33] 2025-12-15 10:38:01,231 | INFO     | corecount: 8
[2025-12-15 11:38:33] 2025-12-15 10:38:01,231 | INFO     | event service: False
[2025-12-15 11:38:33] 2025-12-15 10:38:01,231 | INFO     | sizes: {0: 52315, 11: 52688, 21: 52744, 27: 52860, 32: 52916, 775: 76972, 776: 77104, 807: 80361, 810: 80417, 1312: 80611}
[2025-12-15 11:38:33] 2025-12-15 10:38:01,231 | INFO     | --------------------------------------------------
[2025-12-15 11:38:33] 2025-12-15 10:38:01,231 | INFO     | 
[2025-12-15 11:38:33] 2025-12-15 10:38:01,231 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2025-12-15 11:38:33] 2025-12-15 10:38:01,240 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 11:38:33] 2025-12-15 10:38:01,241 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 11:38:33] 2025-12-15 10:38:01,241 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 11:38:33] 2025-12-15 10:38:01,241 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 11:38:33] 2025-12-15 10:38:01,241 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 11:38:33] 2025-12-15 10:38:01,241 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 11:38:33] 2025-12-15 10:38:01,241 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 11:38:33] 2025-12-15 10:38:01,241 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 11:38:33] 2025-12-15 10:38:01,241 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 11:38:33] 2025-12-15 10:38:01,241 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 11:38:33] 2025-12-15 10:38:01,241 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 11:38:33] 2025-12-15 10:38:01,241 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 11:38:33] 2025-12-15 10:38:01,241 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 11:38:33] 2025-12-15 10:38:01,241 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 11:38:33] 2025-12-15 10:38:01,241 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 11:38:33] 2025-12-15 10:38:01,241 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 11:38:33] 2025-12-15 10:38:01,241 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 11:38:33] 2025-12-15 10:38:01,241 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 11:38:33] 2025-12-15 10:38:01,241 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 11:38:33] 2025-12-15 10:38:01,242 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 11:38:33] 2025-12-15 10:38:01,242 | INFO     | job 6931151579 has completed (purged errors)
[2025-12-15 11:38:33] 2025-12-15 10:38:01,242 | INFO     | overall cleanup function is called
[2025-12-15 11:38:33] 2025-12-15 10:38:02,247 | INFO     | --- collectZombieJob: --- 10, [12721]
[2025-12-15 11:38:33] 2025-12-15 10:38:02,247 | INFO     | zombie collector waiting for pid 12721
[2025-12-15 11:38:33] 2025-12-15 10:38:02,247 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 11:38:33] 2025-12-15 10:38:02,247 | INFO     | collected zombie processes
[2025-12-15 11:38:33] 2025-12-15 10:38:02,247 | INFO     | will attempt to kill all subprocesses of pid=12721
[2025-12-15 11:38:33] 2025-12-15 10:38:02,275 | INFO     | process IDs to be killed: [12721] (in reverse order)
[2025-12-15 11:38:33] 2025-12-15 10:38:02,299 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 11:38:33] 2025-12-15 10:38:02,299 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 11:38:33] 2025-12-15 10:38:02,300 | INFO     | did not find any defunct processes belonging to 12721
[2025-12-15 11:38:33] 2025-12-15 10:38:02,301 | INFO     | did not find any defunct processes belonging to 12721
[2025-12-15 11:38:33] 2025-12-15 10:38:02,301 | INFO     | ready for new job
[2025-12-15 11:38:33] 2025-12-15 10:38:02,301 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 11:38:33] 2025-12-15 10:38:02,302 | INFO     | ***************************************
[2025-12-15 11:38:33] 2025-12-15 10:38:02,302 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 11:38:33] 2025-12-15 10:38:02,302 | INFO     | ***************************************
[2025-12-15 11:38:33] 2025-12-15 10:38:02,302 | INFO     | 
[2025-12-15 11:38:33] 2025-12-15 10:38:02,302 | INFO     | pilot is running in a VM
[2025-12-15 11:38:33] 2025-12-15 10:38:02,302 | INFO     | architecture information:
[2025-12-15 11:38:33] 2025-12-15 10:38:02,302 | INFO     | executing command: cat /etc/os-release
[2025-12-15 11:38:33] 2025-12-15 10:38:02,310 | INFO     | cat /etc/os-release:
[2025-12-15 11:38:33] NAME="CentOS Linux"
[2025-12-15 11:38:33] VERSION="7 (Core)"
[2025-12-15 11:38:33] ID="centos"
[2025-12-15 11:38:33] ID_LIKE="rhel fedora"
[2025-12-15 11:38:33] VERSION_ID="7"
[2025-12-15 11:38:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 11:38:33] ANSI_COLOR="0;31"
[2025-12-15 11:38:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 11:38:33] HOME_URL="https://www.centos.org/"
[2025-12-15 11:38:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 11:38:33] 
[2025-12-15 11:38:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 11:38:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 11:38:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 11:38:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 11:38:33] 
[2025-12-15 11:38:33] 2025-12-15 10:38:02,310 | INFO     | ***************************************
[2025-12-15 11:38:33] 2025-12-15 10:38:02,813 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2025-12-15 11:38:33] 2025-12-15 10:38:02,822 | INFO     | sufficient remaining disk space (498421727232 B)
[2025-12-15 11:38:33] 2025-12-15 10:38:02,822 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 11:38:33] 2025-12-15 10:38:02,822 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 11:38:33] 2025-12-15 10:38:02,822 | INFO     | update_server=False
[2025-12-15 11:38:33] 2025-12-15 10:38:02,822 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 11:38:33] 2025-12-15 10:38:02,822 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 11:38:33] 2025-12-15 10:38:02,875 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-15 11:38:33] 2025-12-15 10:38:02,875 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-15 11:38:33] 2025-12-15 10:38:02,875 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 11:38:33] 2025-12-15 10:38:02,875 | INFO     | will abort loop
[2025-12-15 11:38:33] 2025-12-15 10:38:02,886 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 11:38:33] 2025-12-15 10:38:03,471 | INFO     | all job control threads have been joined
[2025-12-15 11:38:33] 2025-12-15 10:38:03,814 | INFO     | all data control threads have been joined
[2025-12-15 11:38:33] 2025-12-15 10:38:03,827 | INFO     | [job] queue monitor thread has finished
[2025-12-15 11:38:33] 2025-12-15 10:38:03,828 | INFO     | [job] retrieve thread has finished
[2025-12-15 11:38:33] 2025-12-15 10:38:03,881 | INFO     | [job] job monitor thread has finished
[2025-12-15 11:38:33] 2025-12-15 10:38:04,057 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 11:38:33] 2025-12-15 10:38:04,158 | INFO     | [data] copytool_in thread has finished
[2025-12-15 11:38:33] 2025-12-15 10:38:04,183 | INFO     | all payload control threads have been joined
[2025-12-15 11:38:33] 2025-12-15 10:38:04,354 | INFO     | [payload] validate_post thread has finished
[2025-12-15 11:38:33] 2025-12-15 10:38:04,477 | INFO     | [job] control thread has finished
[2025-12-15 11:38:33] 2025-12-15 10:38:04,742 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 11:38:33] 2025-12-15 10:38:04,761 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 11:38:33] 2025-12-15 10:38:04,820 | INFO     | [data] control thread has finished
[2025-12-15 11:38:33] 2025-12-15 10:38:04,876 | INFO     | [payload] failed_post thread has finished
[2025-12-15 11:38:33] 2025-12-15 10:38:04,892 | INFO     | [data] copytool_out thread has finished
[2025-12-15 11:38:33] 2025-12-15 10:38:05,072 | INFO     | [job] validate thread has finished
[2025-12-15 11:38:33] 2025-12-15 10:38:05,125 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 11:38:33] 2025-12-15 10:38:05,189 | INFO     | [payload] control thread has finished
[2025-12-15 11:38:33] 2025-12-15 10:38:05,207 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 11:38:33] 2025-12-15 10:38:08,063 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 11:38:33] 2025-12-15 10:38:12,678 | INFO     | [monitor] cgroup control has ended
[2025-12-15 11:38:33] 2025-12-15 10:38:14,064 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140002097604416)>', '<ExcThread(monitor, started 140001790629632)>']
[2025-12-15 11:38:33] 2025-12-15 10:38:19,072 | INFO     | all workflow threads have been joined
[2025-12-15 11:38:33] 2025-12-15 10:38:19,072 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 11:38:33] 2025-12-15 10:38:19,072 | INFO     | traces error code: 0
[2025-12-15 11:38:33] 2025-12-15 10:38:19,073 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 11:38:33] 2025-12-15 10:38:33,268 | INFO     | PID=6281 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-15 11:38:33] 2025-12-15 10:38:33,269 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 11:38:33] 2025-12-15 10:38:33,269 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 11:38:33] 2025-12-15 10:38:33,269 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 11:38:33] 2025-12-15 10:38:33,269 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 11:38:33] 2025-12-15 10:38:33,269 | INFO     | [monitor] control thread has ended
[2025-12-15 11:38:33] 2025-12-15 10:38:33,324 [wrapper] ==== pilot stdout END ====
[2025-12-15 11:38:33] 2025-12-15 10:38:33,326 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 11:38:33] 2025-12-15 10:38:33,329 [wrapper] pilotpid: 6281
[2025-12-15 11:38:33] 2025-12-15 10:38:33,331 [wrapper] Pilot exit status: 0
[2025-12-15 11:38:33] 2025-12-15 10:38:33,341 [wrapper] pandaids: 6931151579
[2025-12-15 11:38:33] 2025-12-15 10:38:33,358 [wrapper] cleanup supervisor_pilot 19192 6282
[2025-12-15 11:38:33] 2025-12-15 10:38:33,360 [wrapper] Test setup, not cleaning
[2025-12-15 11:38:33] 2025-12-15 10:38:33,364 [wrapper] apfmon messages muted
[2025-12-15 11:38:33] 2025-12-15 10:38:33,366 [wrapper] ==== wrapper stdout END ====
[2025-12-15 11:38:33] 2025-12-15 10:38:33,369 [wrapper] ==== wrapper stderr END ====
[2025-12-15 11:38:33]  *** Error codes and diagnostics ***
[2025-12-15 11:38:33]     "exeErrorCode": 65,
[2025-12-15 11:38:33]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-15 11:38:33]     "pilotErrorCode": 1305,
[2025-12-15 11:38:33]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-15 11:38:33]  *** Listing of results directory ***
[2025-12-15 11:38:33] total 195160
[2025-12-15 11:38:33] -rw-r--r--. 1 boinc boinc    579449 Dec 15 02:16 pilot3.tar.gz
[2025-12-15 11:38:33] -rwx------. 1 boinc boinc     36322 Dec 15 02:17 runpilot2-wrapper.sh
[2025-12-15 11:38:33] -rw-r--r--. 1 boinc boinc      5112 Dec 15 02:19 queuedata.json
[2025-12-15 11:38:33] -rw-r--r--. 1 boinc boinc       100 Dec 15 11:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 11:38:33] -rwxr-xr-x. 1 boinc boinc      7986 Dec 15 11:12 run_atlas
[2025-12-15 11:38:33] -rw-r--r--. 1 boinc boinc       105 Dec 15 11:12 job.xml
[2025-12-15 11:38:33] -rw-r--r--. 1 boinc boinc      6393 Dec 15 11:12 init_data.xml
[2025-12-15 11:38:33] -rw-r--r--. 2 boinc boinc 196954446 Dec 15 11:12 EVNT.47898894._000060.pool.root.1
[2025-12-15 11:38:33] -rw-r--r--. 2 boinc boinc     15847 Dec 15 11:12 start_atlas.sh
[2025-12-15 11:38:33] drwxrwx--x. 2 boinc boinc        68 Dec 15 11:12 shared
[2025-12-15 11:38:33] -rw-r--r--. 2 boinc boinc    592396 Dec 15 11:12 input.tar.gz
[2025-12-15 11:38:33] -rw-r--r--. 1 boinc boinc         0 Dec 15 11:12 boinc_lockfile
[2025-12-15 11:38:33] -rw-r--r--. 1 boinc boinc      2502 Dec 15 11:12 pandaJob.out
[2025-12-15 11:38:33] -rw-------. 1 boinc boinc         0 Dec 15 11:14 agis_ddmendpoints.agis.ALL.json
[2025-12-15 11:38:33] -rw-------. 1 boinc boinc    991016 Dec 15 11:15 agis_schedconf.cvmfs.json
[2025-12-15 11:38:33] drwx------. 5 boinc boinc      4096 Dec 15 11:15 pilot3
[2025-12-15 11:38:33] -rw-r--r--. 1 boinc boinc       524 Dec 15 11:28 boinc_task_state.xml
[2025-12-15 11:38:33] -rw-------. 1 boinc boinc       985 Dec 15 11:29 memory_monitor_summary.json
[2025-12-15 11:38:33] -rw-------. 1 boinc boinc     30543 Dec 15 11:29 log.47898896._001481.job.log.tgz.1
[2025-12-15 11:38:33] -rw-------. 1 boinc boinc      8101 Dec 15 11:38 heartbeat.json
[2025-12-15 11:38:33] -rw-r--r--. 1 boinc boinc      8192 Dec 15 11:38 boinc_mmap_file
[2025-12-15 11:38:33] -rw-r--r--. 1 boinc boinc        24 Dec 15 11:38 wrapper_checkpoint.txt
[2025-12-15 11:38:33] -rw-------. 1 boinc boinc       744 Dec 15 11:38 pilotlog.txt
[2025-12-15 11:38:33] -rw-------. 1 boinc boinc        95 Dec 15 11:38 pilot_heartbeat.json
[2025-12-15 11:38:33] -rw-------. 1 boinc boinc    249300 Dec 15 11:38 log.47898896._001481.job.log.1
[2025-12-15 11:38:33] -rw-r--r--. 1 boinc boinc       571 Dec 15 11:38 runtime_log
[2025-12-15 11:38:33] -rw-------. 1 boinc boinc    266240 Dec 15 11:38 result.tar.gz
[2025-12-15 11:38:33] -rw-r--r--. 1 boinc boinc      8159 Dec 15 11:38 runtime_log.err
[2025-12-15 11:38:33] -rw-------. 1 boinc boinc       639 Dec 15 11:38 J6fKDmoOCp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcpWKDmIhvsUm.diag
[2025-12-15 11:38:33] -rw-r--r--. 1 boinc boinc     21784 Dec 15 11:38 stderr.txt
[2025-12-15 11:38:33] No HITS result produced
[2025-12-15 11:38:33]  *** Contents of shared directory: ***
[2025-12-15 11:38:33] total 193196
[2025-12-15 11:38:33] -rw-r--r--. 2 boinc boinc 196954446 Dec 15 11:12 ATLAS.root_0
[2025-12-15 11:38:33] -rw-r--r--. 2 boinc boinc     15847 Dec 15 11:12 start_atlas.sh
[2025-12-15 11:38:33] -rw-r--r--. 2 boinc boinc    592396 Dec 15 11:12 input.tar.gz
[2025-12-15 11:38:33] -rw-------. 1 boinc boinc    266240 Dec 15 11:38 result.tar.gz
11:38:35 (2549): run_atlas exited; CPU time 24.213942
11:38:35 (2549): called boinc_finish(0)

</stderr_txt>
]]>

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