Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:10:30 (2967809): wrapper (7.7.26015): starting
12:10:30 (2967809): wrapper: running run_atlas (--nthreads 10)
[2025-12-15 12:10:30] Arguments: --nthreads 10
[2025-12-15 12:10:30] Threads: 10
[2025-12-15 12:10:30] Checking for CVMFS
[2025-12-15 12:10:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 12:10:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 12:10:31] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 12:10:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 12:10:32] 2.13.3.0 8702 57554 376732 154040 3 71 20324725 21042176 17221 16776704 0 232155375 99.379 343849633 32320 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-15 12:10:32] CVMFS is ok
[2025-12-15 12:10:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 12:10:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 12:10:32] Further information can be found at the LHC@home message board.
[2025-12-15 12:10:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 12:10:32] Checking for apptainer binary...
[2025-12-15 12:10:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 12:10:32] Running /usr/bin/apptainer --version
[2025-12-15 12:10:32] apptainer version 1.4.5-2.el9
[2025-12-15 12:10:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 12:10:32] c-16-12.aglt2.org
[2025-12-15 12:10:32] apptainer works
[2025-12-15 12:10:33] Set ATHENA_PROC_NUMBER=10
[2025-12-15 12:10:33] Set ATHENA_CORE_NUMBER=10
[2025-12-15 12:10:53] Starting ATLAS job with PandaID=6929467561
[2025-12-15 12:10:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 00:01:07]  *** The last 200 lines of the pilot log: ***
[2025-12-16 00:01:07] 2025-12-16 04:52:04,832 | INFO     | .. there are 21 such processes running
[2025-12-16 00:01:07] 2025-12-16 04:52:05,833 | INFO     | time since job start (42026s) is within the limit (174528.0s)
[2025-12-16 00:01:07] 2025-12-16 04:52:06,806 | INFO     | monitor loop #2167: job 0:6929467561 is in state 'finished'
[2025-12-16 00:01:07] 2025-12-16 04:52:06,808 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 00:01:07] 2025-12-16 04:52:07,841 | INFO     | time since job start (42028s) is within the limit (174528.0s)
[2025-12-16 00:01:07] 2025-12-16 04:52:09,314 | INFO     | monitor loop #2168: job 0:6929467561 is in state 'finished'
[2025-12-16 00:01:07] 2025-12-16 04:52:09,314 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 00:01:07] 2025-12-16 04:52:09,854 | INFO     | time since job start (42030s) is within the limit (174528.0s)
[2025-12-16 00:01:07] 2025-12-16 04:52:11,241 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-16 00:01:07] 2025-12-16 04:52:11,270 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2899.8635249999998
[2025-12-16 00:01:07] 2025-12-16 04:52:11,278 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929467561/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 00:01:07] 2025-12-16 04:52:11,279 | INFO     | extracted standard info from prmon json
[2025-12-16 00:01:07] 2025-12-16 04:52:11,279 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 00:01:07] 2025-12-16 04:52:11,280 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 00:01:07] 2025-12-16 04:52:11,280 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 00:01:07] 2025-12-16 04:52:11,281 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 00:01:07] 2025-12-16 04:52:11,305 | INFO     | fitting pss+swap vs Time
[2025-12-16 00:01:07] 2025-12-16 04:52:11,307 | INFO     | sum of square deviations: 100542341215.33916
[2025-12-16 00:01:07] 2025-12-16 04:52:11,349 | INFO     | sum of deviations: 278748226245.56036
[2025-12-16 00:01:07] 2025-12-16 04:52:11,349 | INFO     | mean x: 1765839731.6885006
[2025-12-16 00:01:07] 2025-12-16 04:52:11,349 | INFO     | mean y: 2605578.1848617177
[2025-12-16 00:01:07] 2025-12-16 04:52:11,350 | INFO     | intersect: -4893089977.460403
[2025-12-16 00:01:07] 2025-12-16 04:52:11,351 | INFO     | chi2: 3.0775335258534775
[2025-12-16 00:01:07] 2025-12-16 04:52:11,352 | INFO     | sum of square deviations: 98363389023.47948
[2025-12-16 00:01:07] 2025-12-16 04:52:11,401 | INFO     | sum of deviations: 322261344361.2776
[2025-12-16 00:01:07] 2025-12-16 04:52:11,402 | INFO     | mean x: 1765839579.2008798
[2025-12-16 00:01:07] 2025-12-16 04:52:11,402 | INFO     | mean y: 2608604.538123167
[2025-12-16 00:01:07] 2025-12-16 04:52:11,402 | INFO     | intersect: -5782692637.815293
[2025-12-16 00:01:07] 2025-12-16 04:52:11,403 | INFO     | chi2: 2.379176041124921
[2025-12-16 00:01:07] 2025-12-16 04:52:11,404 | INFO     | current chi2=2.379176041124921 (change=22.692116230801563 %)
[2025-12-16 00:01:07] 2025-12-16 04:52:11,404 | INFO     | right removable region: 681
[2025-12-16 00:01:07] 2025-12-16 04:52:11,405 | INFO     | sum of square deviations: 98362723088.87964
[2025-12-16 00:01:07] 2025-12-16 04:52:11,420 | INFO     | sum of deviations: 125786304349.03793
[2025-12-16 00:01:07] 2025-12-16 04:52:11,420 | INFO     | mean x: 1765839884.1994135
[2025-12-16 00:01:07] 2025-12-16 04:52:11,421 | INFO     | mean y: 2616260.095307918
[2025-12-16 00:01:07] 2025-12-16 04:52:11,421 | INFO     | intersect: -2255540754.3752365
[2025-12-16 00:01:07] 2025-12-16 04:52:11,422 | INFO     | chi2: 1.13336272942111
[2025-12-16 00:01:07] 2025-12-16 04:52:11,422 | INFO     | current chi2=1.13336272942111 (change=63.1730176162159 %)
[2025-12-16 00:01:07] 2025-12-16 04:52:11,423 | INFO     | sum of square deviations: 96214868091.675
[2025-12-16 00:01:07] 2025-12-16 04:52:11,438 | INFO     | sum of deviations: 67189416900.86855
[2025-12-16 00:01:07] 2025-12-16 04:52:11,438 | INFO     | mean x: 1765840036.7090104
[2025-12-16 00:01:07] 2025-12-16 04:52:11,438 | INFO     | mean y: 2620414.9231905467
[2025-12-16 00:01:07] 2025-12-16 04:52:11,438 | INFO     | intersect: -1230512932.966859
[2025-12-16 00:01:07] 2025-12-16 04:52:11,439 | INFO     | chi2: 0.8845797151393602
[2025-12-16 00:01:07] 2025-12-16 04:52:11,440 | INFO     | current chi2=0.8845797151393602 (change=21.95087308092628 %)
[2025-12-16 00:01:07] 2025-12-16 04:52:11,440 | INFO     | left removable region: 20
[2025-12-16 00:01:07] 2025-12-16 04:52:11,441 | INFO     | sum of square deviations: 89552776961.79129
[2025-12-16 00:01:07] 2025-12-16 04:52:11,454 | INFO     | sum of deviations: 44558542552.966705
[2025-12-16 00:01:07] 2025-12-16 04:52:11,454 | INFO     | mean x: 1765840158.7443268
[2025-12-16 00:01:07] 2025-12-16 04:52:11,455 | INFO     | mean y: 2628519.8577912254
[2025-12-16 00:01:07] 2025-12-16 04:52:11,455 | INFO     | intersect: -875995979.8460838
[2025-12-16 00:01:07] 2025-12-16 04:52:11,456 | INFO     | chi2: 0.03536412697123307
[2025-12-16 00:01:07] 2025-12-16 04:52:11,456 | INFO     | current memory leak: 0.50 B/s (using 661 data points, chi2=0.04)
[2025-12-16 00:01:07] 2025-12-16 04:52:11,457 | INFO     | could have reported an average CPU frequency of 2899 MHz (26 samples)
[2025-12-16 00:01:07] 2025-12-16 04:52:11,457 | INFO     | ..............................
[2025-12-16 00:01:07] 2025-12-16 04:52:11,458 | INFO     | . Timing measurements:
[2025-12-16 00:01:07] 2025-12-16 04:52:11,458 | INFO     | . get job = 0 s
[2025-12-16 00:01:07] 2025-12-16 04:52:11,458 | INFO     | . initial setup = 7 s
[2025-12-16 00:01:07] 2025-12-16 04:52:11,458 | INFO     | . payload setup = 35 s
[2025-12-16 00:01:07] 2025-12-16 04:52:11,458 | INFO     | . stage-in = 0 s
[2025-12-16 00:01:07] 2025-12-16 04:52:11,458 | INFO     | . payload execution = 41904 s
[2025-12-16 00:01:07] 2025-12-16 04:52:11,459 | INFO     | . stage-out = 5 s
[2025-12-16 00:01:07] 2025-12-16 04:52:11,459 | INFO     | . log creation = 0 s
[2025-12-16 00:01:07] 2025-12-16 04:52:11,459 | INFO     | ..............................
[2025-12-16 00:01:07] 2025-12-16 04:52:11,865 | INFO     | time since job start (42032s) is within the limit (174528.0s)
[2025-12-16 00:01:07] 2025-12-16 04:52:12,043 | INFO     | 
[2025-12-16 00:01:07] 2025-12-16 04:52:12,043 | INFO     | job summary report
[2025-12-16 00:01:07] 2025-12-16 04:52:12,043 | INFO     | --------------------------------------------------
[2025-12-16 00:01:07] 2025-12-16 04:52:12,044 | INFO     | PanDA job id: 6929467561
[2025-12-16 00:01:07] 2025-12-16 04:52:12,044 | INFO     | task id: 47898763
[2025-12-16 00:01:07] 2025-12-16 04:52:12,044 | INFO     | errors: (none)
[2025-12-16 00:01:07] 2025-12-16 04:52:12,044 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 00:01:07] 2025-12-16 04:52:12,044 | INFO     | pilot state: finished 
[2025-12-16 00:01:07] 2025-12-16 04:52:12,044 | INFO     | transexitcode: 0
[2025-12-16 00:01:07] 2025-12-16 04:52:12,044 | INFO     | exeerrorcode: 0
[2025-12-16 00:01:07] 2025-12-16 04:52:12,045 | INFO     | exeerrordiag: 
[2025-12-16 00:01:07] 2025-12-16 04:52:12,045 | INFO     | exitcode: 0
[2025-12-16 00:01:07] 2025-12-16 04:52:12,045 | INFO     | exitmsg: OK
[2025-12-16 00:01:07] 2025-12-16 04:52:12,045 | INFO     | cpuconsumptiontime: 119342 s
[2025-12-16 00:01:07] 2025-12-16 04:52:12,045 | INFO     | nevents: 400
[2025-12-16 00:01:07] 2025-12-16 04:52:12,045 | INFO     | neventsw: 0
[2025-12-16 00:01:07] 2025-12-16 04:52:12,045 | INFO     | pid: 2980591
[2025-12-16 00:01:07] 2025-12-16 04:52:12,046 | INFO     | pgrp: 2980591
[2025-12-16 00:01:07] 2025-12-16 04:52:12,046 | INFO     | corecount: 10
[2025-12-16 00:01:07] 2025-12-16 04:52:12,046 | INFO     | event service: False
[2025-12-16 00:01:07] 2025-12-16 04:52:12,046 | INFO     | sizes: {0: 2283785, 1: 2283984, 12: 2283984, 19: 2284274, 23: 2284302, 41944: 2326997, 41950: 2335995, 41954: 2336051, 41986: 2336245}
[2025-12-16 00:01:07] 2025-12-16 04:52:12,046 | INFO     | --------------------------------------------------
[2025-12-16 00:01:07] 2025-12-16 04:52:12,046 | INFO     | 
[2025-12-16 00:01:07] 2025-12-16 04:52:12,047 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-16 00:01:07] 2025-12-16 04:52:12,152 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 00:01:07] 2025-12-16 04:52:12,152 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 00:01:07] 2025-12-16 04:52:12,152 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 00:01:07] 2025-12-16 04:52:12,153 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 00:01:07] 2025-12-16 04:52:12,154 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 00:01:07] 2025-12-16 04:52:12,154 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 00:01:07] 2025-12-16 04:52:12,154 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 00:01:07] 2025-12-16 04:52:12,154 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 00:01:07] 2025-12-16 04:52:12,154 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 00:01:07] 2025-12-16 04:52:12,154 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 00:01:07] 2025-12-16 04:52:12,155 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 00:01:07] 2025-12-16 04:52:12,156 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 00:01:07] 2025-12-16 04:52:12,156 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 00:01:07] 2025-12-16 04:52:12,156 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 00:01:07] 2025-12-16 04:52:12,156 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 00:01:07] 2025-12-16 04:52:12,157 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 00:01:07] 2025-12-16 04:52:12,157 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 00:01:07] 2025-12-16 04:52:12,157 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 00:01:07] 2025-12-16 04:52:12,157 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 00:01:07] 2025-12-16 04:52:12,157 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 00:01:07] 2025-12-16 04:52:12,157 | INFO     | job 6929467561 has completed (purged errors)
[2025-12-16 00:01:07] 2025-12-16 04:52:12,158 | INFO     | overall cleanup function is called
[2025-12-16 00:01:07] 2025-12-16 04:52:13,169 | INFO     | --- collectZombieJob: --- 10, [2980591]
[2025-12-16 00:01:07] 2025-12-16 04:52:13,169 | INFO     | zombie collector waiting for pid 2980591
[2025-12-16 00:01:07] 2025-12-16 04:52:13,169 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 00:01:07] 2025-12-16 04:52:13,169 | INFO     | collected zombie processes
[2025-12-16 00:01:07] 2025-12-16 04:52:13,170 | INFO     | will attempt to kill all subprocesses of pid=2980591
[2025-12-16 00:01:07] 2025-12-16 04:52:14,240 | INFO     | process IDs to be killed: [2980591] (in reverse order)
[2025-12-16 00:01:07] 2025-12-16 04:52:15,878 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 00:01:07] 2025-12-16 04:52:15,878 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 00:01:07] 2025-12-16 04:52:16,164 | INFO     | did not find any defunct processes belonging to 2980591
[2025-12-16 00:01:07] 2025-12-16 04:52:16,309 | INFO     | did not find any defunct processes belonging to 2980591
[2025-12-16 00:01:07] 2025-12-16 04:52:16,309 | INFO     | ready for new job
[2025-12-16 00:01:07] 2025-12-16 04:52:16,310 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 00:01:07] 2025-12-16 04:52:16,321 | INFO     | ***************************************
[2025-12-16 00:01:07] 2025-12-16 04:52:16,330 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 00:01:07] 2025-12-16 04:52:16,330 | INFO     | ***************************************
[2025-12-16 00:01:07] 2025-12-16 04:52:16,330 | INFO     | 
[2025-12-16 00:01:07] 2025-12-16 04:52:16,332 | INFO     | architecture information:
[2025-12-16 00:01:07] 2025-12-16 04:52:16,339 | INFO     | executing command: cat /etc/os-release
[2025-12-16 00:01:07] 2025-12-16 04:52:16,479 | INFO     | cat /etc/os-release:
[2025-12-16 00:01:07] NAME="CentOS Linux"
[2025-12-16 00:01:07] VERSION="7 (Core)"
[2025-12-16 00:01:07] ID="centos"
[2025-12-16 00:01:07] ID_LIKE="rhel fedora"
[2025-12-16 00:01:07] VERSION_ID="7"
[2025-12-16 00:01:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 00:01:07] ANSI_COLOR="0;31"
[2025-12-16 00:01:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 00:01:07] HOME_URL="https://www.centos.org/"
[2025-12-16 00:01:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 00:01:07] 
[2025-12-16 00:01:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 00:01:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 00:01:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 00:01:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 00:01:07] 
[2025-12-16 00:01:07] 2025-12-16 04:52:16,479 | INFO     | ***************************************
[2025-12-16 00:01:07] 2025-12-16 04:52:16,983 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-16 00:01:07] 2025-12-16 04:52:17,009 | INFO     | sufficient remaining disk space (52881784832 B)
[2025-12-16 00:01:07] 2025-12-16 04:52:17,033 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 00:01:07] 2025-12-16 04:52:17,033 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 00:01:07] 2025-12-16 04:52:17,034 | INFO     | update_server=False
[2025-12-16 00:01:07] 2025-12-16 04:52:17,034 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 00:01:07] 2025-12-16 04:52:17,035 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 00:01:07] 2025-12-16 04:52:17,085 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 00:01:07] 2025-12-16 04:52:17,152 | INFO     | all data control threads have been joined
[2025-12-16 00:01:07] 2025-12-16 04:52:17,592 | INFO     | all job control threads have been joined
[2025-12-16 00:01:07] 2025-12-16 04:52:17,594 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 00:01:07] 2025-12-16 04:52:17,794 | INFO     | all payload control threads have been joined
[2025-12-16 00:01:07] 2025-12-16 04:52:17,886 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 00:01:07] 2025-12-16 04:52:17,886 | INFO     | aborting loop
[2025-12-16 00:01:07] 2025-12-16 04:52:18,039 | INFO     | [job] retrieve thread has finished
[2025-12-16 00:01:07] 2025-12-16 04:52:18,091 | INFO     | [job] queue monitor thread has finished
[2025-12-16 00:01:07] 2025-12-16 04:52:18,158 | INFO     | [data] control thread has finished
[2025-12-16 00:01:07] 2025-12-16 04:52:18,254 | INFO     | [payload] validate_post thread has finished
[2025-12-16 00:01:07] 2025-12-16 04:52:18,492 | INFO     | [data] copytool_in thread has finished
[2025-12-16 00:01:07] 2025-12-16 04:52:18,598 | INFO     | [job] control thread has finished
[2025-12-16 00:01:07] 2025-12-16 04:52:18,800 | INFO     | [payload] control thread has finished
[2025-12-16 00:01:07] 2025-12-16 04:52:18,832 | INFO     | [payload] failed_post thread has finished
[2025-12-16 00:01:07] 2025-12-16 04:52:18,892 | INFO     | [job] job monitor thread has finished
[2025-12-16 00:01:07] 2025-12-16 04:52:19,042 | INFO     | [data] copytool_out thread has finished
[2025-12-16 00:01:07] 2025-12-16 04:52:19,050 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 00:01:07] 2025-12-16 04:52:19,054 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 00:01:07] 2025-12-16 04:52:19,471 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 00:01:07] 2025-12-16 04:52:19,540 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 00:01:07] 2025-12-16 04:52:19,546 | INFO     | [job] validate thread has finished
[2025-12-16 00:01:07] 2025-12-16 04:52:21,603 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 00:01:07] 2025-12-16 04:52:47,561 | INFO     | PID=2972357 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 00:01:07] 2025-12-16 04:52:47,561 | INFO     | .. there are 21 such processes running
[2025-12-16 00:01:07] 2025-12-16 04:52:47,562 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 00:01:07] 2025-12-16 04:52:47,562 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 00:01:07] 2025-12-16 04:52:47,562 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 00:01:07] 2025-12-16 04:53:01,364 | INFO     | [monitor] cgroup control has ended
[2025-12-16 00:01:07] 2025-12-16 04:53:01,705 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140106605315904)>', '<ExcThread(monitor, started 140105951979264)>']
[2025-12-16 00:01:07] 2025-12-16 04:53:02,708 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 00:01:07] 2025-12-16 04:53:02,708 | INFO     | [monitor] control thread has ended
[2025-12-16 00:01:07] 2025-12-16 04:53:06,731 | INFO     | all workflow threads have been joined
[2025-12-16 00:01:07] 2025-12-16 04:53:06,731 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 00:01:07] 2025-12-16 04:53:06,732 | INFO     | traces error code: 0
[2025-12-16 00:01:07] 2025-12-16 04:53:06,732 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 00:01:07] 2025-12-16 04:53:06,998 [wrapper] ==== pilot stdout END ====
[2025-12-16 00:01:07] 2025-12-16 04:53:07,002 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 00:01:07] 2025-12-16 04:53:07,005 [wrapper] pilotpid: 2972357
[2025-12-16 00:01:07] 2025-12-16 04:53:07,008 [wrapper] Pilot exit status: 0
[2025-12-16 00:01:07] 2025-12-16 04:53:07,025 [wrapper] pandaids: 6929467561
[2025-12-16 00:01:07] 2025-12-16 04:53:07,145 [wrapper] cleanup supervisor_pilot  933241 2972358
[2025-12-16 00:01:07] 2025-12-16 04:53:07,155 [wrapper] Test setup, not cleaning
[2025-12-16 00:01:07] 2025-12-16 04:53:07,183 [wrapper] apfmon messages muted
[2025-12-16 00:01:07] 2025-12-16 04:53:07,206 [wrapper] ==== wrapper stdout END ====
[2025-12-16 00:01:07] 2025-12-16 04:53:07,228 [wrapper] ==== wrapper stderr END ====
[2025-12-16 00:01:07]  *** Error codes and diagnostics ***
[2025-12-16 00:01:07]     "exeErrorCode": 0,
[2025-12-16 00:01:07]     "exeErrorDiag": "",
[2025-12-16 00:01:07]     "pilotErrorCode": 0,
[2025-12-16 00:01:07]     "pilotErrorDiag": "",
[2025-12-16 00:01:07]  *** Listing of results directory ***
[2025-12-16 00:01:07] total 453068
[2025-12-16 00:01:07] -rw-r--r--. 1 boincer umatlas      5112 Dec 14 15:38 queuedata.json
[2025-12-16 00:01:07] -rw-r--r--. 1 boincer umatlas    579449 Dec 14 15:38 pilot3.tar.gz
[2025-12-16 00:01:07] -rwx------. 1 boincer umatlas     36322 Dec 14 15:38 runpilot2-wrapper.sh
[2025-12-16 00:01:07] -rw-r--r--. 1 boincer umatlas       100 Dec 15 12:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 00:01:07] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 15 12:10 run_atlas
[2025-12-16 00:01:07] -rw-r--r--. 1 boincer umatlas       105 Dec 15 12:10 job.xml
[2025-12-16 00:01:07] -rw-r--r--. 2 boincer umatlas 224204507 Dec 15 12:10 EVNT.47898761._000559.pool.root.1
[2025-12-16 00:01:07] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 12:10 start_atlas.sh
[2025-12-16 00:01:07] drwxrwx--x. 2 boincer umatlas      4096 Dec 15 12:10 shared
[2025-12-16 00:01:07] -rw-r--r--. 2 boincer umatlas    592395 Dec 15 12:10 input.tar.gz
[2025-12-16 00:01:07] -rw-r--r--. 1 boincer umatlas         0 Dec 15 12:10 boinc_lockfile
[2025-12-16 00:01:07] -rw-r--r--. 1 boincer umatlas      2506 Dec 15 12:10 pandaJob.out
[2025-12-16 00:01:07] -rw-------. 1 boincer umatlas        57 Dec 15 12:10 setup.sh.local
[2025-12-16 00:01:07] -rw-------. 1 boincer umatlas    994465 Dec 15 12:11 agis_schedconf.cvmfs.json
[2025-12-16 00:01:07] drwx------. 5 boincer umatlas      4096 Dec 15 12:11 pilot3
[2025-12-16 00:01:07] -rw-------. 1 boincer umatlas 224615957 Dec 15 23:50 HITS.47898763._012724.pool.root.1
[2025-12-16 00:01:07] -rw-r--r--. 1 boincer umatlas       532 Dec 15 23:50 boinc_task_state.xml
[2025-12-16 00:01:07] -rw-------. 1 boincer umatlas      1040 Dec 15 23:51 memory_monitor_summary.json
[2025-12-16 00:01:07] -rw-------. 1 boincer umatlas   1516240 Dec 15 23:51 agis_ddmendpoints.agis.ALL.json
[2025-12-16 00:01:07] -rw-------. 1 boincer umatlas    819923 Dec 15 23:51 log.47898763._012724.job.log.tgz.1
[2025-12-16 00:01:07] -rw-------. 1 boincer umatlas        95 Dec 15 23:52 pilot_heartbeat.json
[2025-12-16 00:01:07] -rw-------. 1 boincer umatlas      7819 Dec 15 23:52 heartbeat.json
[2025-12-16 00:01:07] -rw-------. 1 boincer umatlas      4824 Dec 15 23:53 pilotlog.txt
[2025-12-16 00:01:07] -rw-------. 1 boincer umatlas   4779698 Dec 15 23:53 log.47898763._012724.job.log.1
[2025-12-16 00:01:07] -rw-------. 1 boincer umatlas       357 Dec 15 23:53 output.list
[2025-12-16 00:01:07] -rw-r--r--. 1 boincer umatlas       620 Dec 15 23:53 runtime_log
[2025-12-16 00:01:07] -rw-------. 1 boincer umatlas   5621760 Dec 15 23:53 result.tar.gz
[2025-12-16 00:01:07] -rw-------. 1 boincer umatlas       658 Dec 15 23:53 ShXMDmO27o8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1IWKDmXvJhYm.diag
[2025-12-16 00:01:07] -rw-r--r--. 1 boincer umatlas      9340 Dec 15 23:53 runtime_log.err
[2025-12-16 00:01:07] -rw-r--r--. 1 boincer umatlas      6526 Dec 16 00:01 init_data.xml
[2025-12-16 00:01:07] -rw-r--r--. 1 boincer umatlas      8192 Dec 16 00:01 boinc_mmap_file
[2025-12-16 00:01:07] -rw-r--r--. 1 boincer umatlas        29 Dec 16 00:01 wrapper_checkpoint.txt
[2025-12-16 00:01:07] -rw-r--r--. 1 boincer umatlas     21390 Dec 16 00:01 stderr.txt
[2025-12-16 00:01:07] HITS file was successfully produced:
[2025-12-16 00:01:07] -rw-------. 1 boincer umatlas 224615957 Dec 15 23:50 shared/HITS.pool.root.1
[2025-12-16 00:01:07]  *** Contents of shared directory: ***
[2025-12-16 00:01:07] total 444396
[2025-12-16 00:01:07] -rw-r--r--. 2 boincer umatlas 224204507 Dec 15 12:10 ATLAS.root_0
[2025-12-16 00:01:07] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 12:10 start_atlas.sh
[2025-12-16 00:01:07] -rw-r--r--. 2 boincer umatlas    592395 Dec 15 12:10 input.tar.gz
[2025-12-16 00:01:07] -rw-------. 1 boincer umatlas 224615957 Dec 15 23:50 HITS.pool.root.1
[2025-12-16 00:01:07] -rw-------. 1 boincer umatlas   5621760 Dec 15 23:53 result.tar.gz
00:01:09 (2967809): run_atlas exited; CPU time 121310.710401
00:01:09 (2967809): called boinc_finish(0)

</stderr_txt>
]]>

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