Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:30 (1408143): wrapper (7.7.26015): starting
00:02:30 (1408143): wrapper: running run_atlas (--nthreads 8)
[2025-12-15 00:02:30] Arguments: --nthreads 8
[2025-12-15 00:02:30] Threads: 8
[2025-12-15 00:02:30] Checking for CVMFS
[2025-12-15 00:02:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 00:02:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 00:02:31] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 00:02:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 00:02:32] 2.13.3.0 25561 13581 230876 154019 3 532 39457351 40960001 14634 16776704 0 24320511 99.563 25647419 35475 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-15 00:02:32] CVMFS is ok
[2025-12-15 00:02:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 00:02:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 00:02:32] Further information can be found at the LHC@home message board.
[2025-12-15 00:02:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 00:02:32] Checking for apptainer binary...
[2025-12-15 00:02:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 00:02:33] Running /usr/bin/apptainer --version
[2025-12-15 00:02:33] apptainer version 1.4.5-2.el9
[2025-12-15 00:02:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 00:02:33] c7-11-15.aglt2.org
[2025-12-15 00:02:33] apptainer works
[2025-12-15 00:02:33] Set ATHENA_PROC_NUMBER=8
[2025-12-15 00:02:33] Set ATHENA_CORE_NUMBER=8
[2025-12-15 00:02:34] Starting ATLAS job with PandaID=6929410654
[2025-12-15 00:02:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 14:55:21]  *** The last 200 lines of the pilot log: ***
[2025-12-15 14:55:21] 2025-12-15 19:54:45,314 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3290.6313906249998
[2025-12-15 14:55:21] 2025-12-15 19:54:45,323 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6929410654/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 14:55:21] 2025-12-15 19:54:45,323 | INFO     | extracted standard info from prmon json
[2025-12-15 14:55:21] 2025-12-15 19:54:45,323 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 14:55:21] 2025-12-15 19:54:45,323 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 14:55:21] 2025-12-15 19:54:45,324 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 14:55:21] 2025-12-15 19:54:45,324 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 14:55:21] 2025-12-15 19:54:45,334 | INFO     | fitting pss+swap vs Time
[2025-12-15 14:55:21] 2025-12-15 19:54:45,335 | INFO     | sum of square deviations: 205590454346.27545
[2025-12-15 14:55:21] 2025-12-15 19:54:45,351 | INFO     | sum of deviations: 294696152085.99084
[2025-12-15 14:55:21] 2025-12-15 19:54:45,351 | INFO     | mean x: 1765801890.233945
[2025-12-15 14:55:21] 2025-12-15 19:54:45,352 | INFO     | mean y: 2498357.142201835
[2025-12-15 14:55:21] 2025-12-15 19:54:45,352 | INFO     | intersect: -2528626076.8825727
[2025-12-15 14:55:21] 2025-12-15 19:54:45,352 | INFO     | chi2: 3.75471705854468
[2025-12-15 14:55:21] 2025-12-15 19:54:45,353 | INFO     | sum of square deviations: 202074049686.5147
[2025-12-15 14:55:21] 2025-12-15 19:54:45,374 | INFO     | sum of deviations: 405671902563.4166
[2025-12-15 14:55:21] 2025-12-15 19:54:45,374 | INFO     | mean x: 1765801737.7358708
[2025-12-15 14:55:21] 2025-12-15 19:54:45,374 | INFO     | mean y: 2503152.9319492504
[2025-12-15 14:55:21] 2025-12-15 19:54:45,374 | INFO     | intersect: -3542415908.21607
[2025-12-15 14:55:21] 2025-12-15 19:54:45,375 | INFO     | chi2: 2.298907613072533
[2025-12-15 14:55:21] 2025-12-15 19:54:45,375 | INFO     | current chi2=2.298907613072533 (change=38.77281357750071 %)
[2025-12-15 14:55:21] 2025-12-15 19:54:45,380 | INFO     | sum of square deviations: 198598023884.7703
[2025-12-15 14:55:21] 2025-12-15 19:54:45,400 | INFO     | sum of deviations: 401943832706.5706
[2025-12-15 14:55:21] 2025-12-15 19:54:45,400 | INFO     | mean x: 1765801585.238979
[2025-12-15 14:55:21] 2025-12-15 19:54:45,400 | INFO     | mean y: 2502989.3758700695
[2025-12-15 14:55:21] 2025-12-15 19:54:45,400 | INFO     | intersect: -3571314328.071877
[2025-12-15 14:55:21] 2025-12-15 19:54:45,401 | INFO     | chi2: 2.2989240940148927
[2025-12-15 14:55:21] 2025-12-15 19:54:45,401 | INFO     | current chi2=2.2989240940148927 (change=-0.0007169032050706944 %)
[2025-12-15 14:55:21] 2025-12-15 19:54:45,401 | INFO     | right removable region: 861
[2025-12-15 14:55:21] 2025-12-15 19:54:45,402 | INFO     | sum of square deviations: 202073765303.56613
[2025-12-15 14:55:21] 2025-12-15 19:54:45,415 | INFO     | sum of deviations: 98420049476.45566
[2025-12-15 14:55:21] 2025-12-15 19:54:45,415 | INFO     | mean x: 1765802042.7381775
[2025-12-15 14:55:21] 2025-12-15 19:54:45,415 | INFO     | mean y: 2506854.2883506343
[2025-12-15 14:55:21] 2025-12-15 19:54:45,415 | INFO     | intersect: -857527223.6180054
[2025-12-15 14:55:21] 2025-12-15 19:54:45,416 | INFO     | chi2: 1.514247384072211
[2025-12-15 14:55:21] 2025-12-15 19:54:45,416 | INFO     | current chi2=1.514247384072211 (change=59.67079914513905 %)
[2025-12-15 14:55:21] 2025-12-15 19:54:45,417 | INFO     | sum of square deviations: 198597455607.80966
[2025-12-15 14:55:21] 2025-12-15 19:54:45,429 | INFO     | sum of deviations: 75716292580.35503
[2025-12-15 14:55:21] 2025-12-15 19:54:45,430 | INFO     | mean x: 1765802195.2412994
[2025-12-15 14:55:21] 2025-12-15 19:54:45,430 | INFO     | mean y: 2507848.1473317863
[2025-12-15 14:55:21] 2025-12-15 19:54:45,430 | INFO     | intersect: -670713242.4488852
[2025-12-15 14:55:21] 2025-12-15 19:54:45,430 | INFO     | chi2: 1.4797582332446844
[2025-12-15 14:55:21] 2025-12-15 19:54:45,430 | INFO     | current chi2=1.4797582332446844 (change=2.27764308463101 %)
[2025-12-15 14:55:21] 2025-12-15 19:54:45,431 | INFO     | left removable region: 20
[2025-12-15 14:55:21] 2025-12-15 19:54:45,431 | INFO     | sum of square deviations: 184432759635.05347
[2025-12-15 14:55:21] 2025-12-15 19:54:45,443 | INFO     | sum of deviations: 172689717074.55405
[2025-12-15 14:55:21] 2025-12-15 19:54:45,443 | INFO     | mean x: 1765802164.74673
[2025-12-15 14:55:21] 2025-12-15 19:54:45,443 | INFO     | mean y: 2513130.11058264
[2025-12-15 14:55:21] 2025-12-15 19:54:45,443 | INFO     | intersect: -1650858412.1422153
[2025-12-15 14:55:21] 2025-12-15 19:54:45,444 | INFO     | chi2: 0.009523949675535187
[2025-12-15 14:55:21] 2025-12-15 19:54:45,444 | INFO     | current memory leak: 0.94 B/s (using 841 data points, chi2=0.01)
[2025-12-15 14:55:21] 2025-12-15 19:54:45,445 | INFO     | could have reported an average CPU frequency of 3284 MHz (33 samples)
[2025-12-15 14:55:21] 2025-12-15 19:54:45,445 | INFO     | ..............................
[2025-12-15 14:55:21] 2025-12-15 19:54:45,445 | INFO     | . Timing measurements:
[2025-12-15 14:55:21] 2025-12-15 19:54:45,445 | INFO     | . get job = 0 s
[2025-12-15 14:55:21] 2025-12-15 19:54:45,445 | INFO     | . initial setup = 9 s
[2025-12-15 14:55:21] 2025-12-15 19:54:45,445 | INFO     | . payload setup = 74 s
[2025-12-15 14:55:21] 2025-12-15 19:54:45,445 | INFO     | . stage-in = 0 s
[2025-12-15 14:55:21] 2025-12-15 19:54:45,445 | INFO     | . payload execution = 53200 s
[2025-12-15 14:55:21] 2025-12-15 19:54:45,445 | INFO     | . stage-out = 2 s
[2025-12-15 14:55:21] 2025-12-15 19:54:45,445 | INFO     | . log creation = 0 s
[2025-12-15 14:55:21] 2025-12-15 19:54:45,445 | INFO     | ..............................
[2025-12-15 14:55:21] 2025-12-15 19:54:45,529 | INFO     | 
[2025-12-15 14:55:21] 2025-12-15 19:54:45,530 | INFO     | job summary report
[2025-12-15 14:55:21] 2025-12-15 19:54:45,530 | INFO     | --------------------------------------------------
[2025-12-15 14:55:21] 2025-12-15 19:54:45,530 | INFO     | PanDA job id: 6929410654
[2025-12-15 14:55:21] 2025-12-15 19:54:45,530 | INFO     | task id: 47898836
[2025-12-15 14:55:21] 2025-12-15 19:54:45,530 | INFO     | errors: (none)
[2025-12-15 14:55:21] 2025-12-15 19:54:45,530 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 14:55:21] 2025-12-15 19:54:45,530 | INFO     | pilot state: finished 
[2025-12-15 14:55:21] 2025-12-15 19:54:45,530 | INFO     | transexitcode: 0
[2025-12-15 14:55:21] 2025-12-15 19:54:45,530 | INFO     | exeerrorcode: 0
[2025-12-15 14:55:21] 2025-12-15 19:54:45,530 | INFO     | exeerrordiag: 
[2025-12-15 14:55:21] 2025-12-15 19:54:45,530 | INFO     | exitcode: 0
[2025-12-15 14:55:21] 2025-12-15 19:54:45,530 | INFO     | exitmsg: OK
[2025-12-15 14:55:21] 2025-12-15 19:54:45,530 | INFO     | cpuconsumptiontime: 44011 s
[2025-12-15 14:55:21] 2025-12-15 19:54:45,530 | INFO     | nevents: 400
[2025-12-15 14:55:21] 2025-12-15 19:54:45,530 | INFO     | neventsw: 0
[2025-12-15 14:55:21] 2025-12-15 19:54:45,531 | INFO     | pid: 1473167
[2025-12-15 14:55:21] 2025-12-15 19:54:45,531 | INFO     | pgrp: 1473167
[2025-12-15 14:55:21] 2025-12-15 19:54:45,531 | INFO     | corecount: 8
[2025-12-15 14:55:21] 2025-12-15 19:54:45,531 | INFO     | event service: False
[2025-12-15 14:55:21] 2025-12-15 19:54:45,531 | INFO     | sizes: {0: 2283180, 1: 2283865, 2: 2283865, 3: 2284064, 4: 2284120, 15: 2284120, 27: 2284276, 37: 2284304, 49: 2284332, 54: 2284622, 60: 2284650, 53279: 2333645, 5
[2025-12-15 14:55:21] 2025-12-15 19:54:45,531 | INFO     | --------------------------------------------------
[2025-12-15 14:55:21] 2025-12-15 19:54:45,531 | INFO     | 
[2025-12-15 14:55:21] 2025-12-15 19:54:45,531 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-12-15 14:55:21] 2025-12-15 19:54:45,642 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 14:55:21] 2025-12-15 19:54:45,642 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 14:55:21] 2025-12-15 19:54:45,642 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 14:55:21] 2025-12-15 19:54:45,643 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 14:55:21] 2025-12-15 19:54:45,643 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 14:55:21] 2025-12-15 19:54:45,643 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 14:55:21] 2025-12-15 19:54:45,643 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 14:55:21] 2025-12-15 19:54:45,643 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 14:55:21] 2025-12-15 19:54:45,643 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 14:55:21] 2025-12-15 19:54:45,643 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 14:55:21] 2025-12-15 19:54:45,643 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 14:55:21] 2025-12-15 19:54:45,643 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 14:55:21] 2025-12-15 19:54:45,643 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 14:55:21] 2025-12-15 19:54:45,643 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 14:55:21] 2025-12-15 19:54:45,643 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 14:55:21] 2025-12-15 19:54:45,643 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 14:55:21] 2025-12-15 19:54:45,643 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 14:55:21] 2025-12-15 19:54:45,643 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 14:55:21] 2025-12-15 19:54:45,643 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 14:55:21] 2025-12-15 19:54:45,643 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 14:55:21] 2025-12-15 19:54:45,644 | INFO     | job 6929410654 has completed (purged errors)
[2025-12-15 14:55:21] 2025-12-15 19:54:45,644 | INFO     | overall cleanup function is called
[2025-12-15 14:55:21] 2025-12-15 19:54:46,660 | INFO     | --- collectZombieJob: --- 10, [1473167]
[2025-12-15 14:55:21] 2025-12-15 19:54:46,660 | INFO     | zombie collector waiting for pid 1473167
[2025-12-15 14:55:21] 2025-12-15 19:54:46,660 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 14:55:21] 2025-12-15 19:54:46,660 | INFO     | collected zombie processes
[2025-12-15 14:55:21] 2025-12-15 19:54:46,660 | INFO     | will attempt to kill all subprocesses of pid=1473167
[2025-12-15 14:55:21] 2025-12-15 19:54:47,638 | INFO     | PID=1426153 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-15 14:55:21] 2025-12-15 19:54:47,639 | INFO     | .. there are 10 such processes running
[2025-12-15 14:55:21] 2025-12-15 19:54:47,749 | INFO     | process IDs to be killed: [1473167] (in reverse order)
[2025-12-15 14:55:21] 2025-12-15 19:54:47,870 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 14:55:21] 2025-12-15 19:54:47,870 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 14:55:21] 2025-12-15 19:54:47,882 | INFO     | did not find any defunct processes belonging to 1473167
[2025-12-15 14:55:21] 2025-12-15 19:54:47,893 | INFO     | did not find any defunct processes belonging to 1473167
[2025-12-15 14:55:21] 2025-12-15 19:54:47,894 | INFO     | ready for new job
[2025-12-15 14:55:21] 2025-12-15 19:54:47,894 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 14:55:21] 2025-12-15 19:54:47,898 | INFO     | ***************************************
[2025-12-15 14:55:21] 2025-12-15 19:54:47,898 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 14:55:21] 2025-12-15 19:54:47,898 | INFO     | ***************************************
[2025-12-15 14:55:21] 2025-12-15 19:54:47,898 | INFO     | 
[2025-12-15 14:55:21] 2025-12-15 19:54:47,902 | INFO     | architecture information:
[2025-12-15 14:55:21] 2025-12-15 19:54:47,902 | INFO     | executing command: cat /etc/os-release
[2025-12-15 14:55:21] 2025-12-15 19:54:47,949 | INFO     | cat /etc/os-release:
[2025-12-15 14:55:21] NAME="CentOS Linux"
[2025-12-15 14:55:21] VERSION="7 (Core)"
[2025-12-15 14:55:21] ID="centos"
[2025-12-15 14:55:21] ID_LIKE="rhel fedora"
[2025-12-15 14:55:21] VERSION_ID="7"
[2025-12-15 14:55:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 14:55:21] ANSI_COLOR="0;31"
[2025-12-15 14:55:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 14:55:21] HOME_URL="https://www.centos.org/"
[2025-12-15 14:55:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 14:55:21] 
[2025-12-15 14:55:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 14:55:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 14:55:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 14:55:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 14:55:21] 
[2025-12-15 14:55:21] 2025-12-15 19:54:47,949 | INFO     | ***************************************
[2025-12-15 14:55:21] 2025-12-15 19:54:48,453 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-12-15 14:55:21] 2025-12-15 19:54:48,726 | INFO     | sufficient remaining disk space (85104525312 B)
[2025-12-15 14:55:21] 2025-12-15 19:54:48,726 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 14:55:21] 2025-12-15 19:54:48,726 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 14:55:21] 2025-12-15 19:54:48,726 | INFO     | update_server=False
[2025-12-15 14:55:21] 2025-12-15 19:54:48,726 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 14:55:21] 2025-12-15 19:54:48,730 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 14:55:21] 2025-12-15 19:54:49,001 | INFO     | all data control threads have been joined
[2025-12-15 14:55:21] 2025-12-15 19:54:49,303 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 14:55:21] 2025-12-15 19:54:49,303 | INFO     | aborting loop
[2025-12-15 14:55:21] 2025-12-15 19:54:49,420 | INFO     | all payload control threads have been joined
[2025-12-15 14:55:21] 2025-12-15 19:54:49,734 | INFO     | [job] retrieve thread has finished
[2025-12-15 14:55:21] 2025-12-15 19:54:49,855 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 14:55:21] 2025-12-15 19:54:49,919 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 14:55:21] 2025-12-15 19:54:50,007 | INFO     | [data] control thread has finished
[2025-12-15 14:55:21] 2025-12-15 19:54:50,174 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 14:55:21] 2025-12-15 19:54:50,309 | INFO     | [job] job monitor thread has finished
[2025-12-15 14:55:21] 2025-12-15 19:54:50,361 | INFO     | all job control threads have been joined
[2025-12-15 14:55:21] 2025-12-15 19:54:50,410 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 14:55:21] 2025-12-15 19:54:50,426 | INFO     | [payload] control thread has finished
[2025-12-15 14:55:21] 2025-12-15 19:54:50,545 | INFO     | [data] copytool_in thread has finished
[2025-12-15 14:55:21] 2025-12-15 19:54:50,584 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 14:55:21] 2025-12-15 19:54:50,675 | INFO     | [job] validate thread has finished
[2025-12-15 14:55:21] 2025-12-15 19:54:50,748 | INFO     | [data] copytool_out thread has finished
[2025-12-15 14:55:21] 2025-12-15 19:54:51,142 | INFO     | [payload] validate_post thread has finished
[2025-12-15 14:55:21] 2025-12-15 19:54:51,306 | INFO     | [payload] failed_post thread has finished
[2025-12-15 14:55:21] 2025-12-15 19:54:51,367 | INFO     | [job] control thread has finished
[2025-12-15 14:55:21] 2025-12-15 19:54:51,590 | INFO     | [job] queue monitor thread has finished
[2025-12-15 14:55:21] 2025-12-15 19:54:51,799 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 14:55:21] 2025-12-15 19:54:55,814 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 14:55:21] 2025-12-15 19:55:03,280 | INFO     | [monitor] cgroup control has ended
[2025-12-15 14:55:21] 2025-12-15 19:55:04,424 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140681233295168)>', '<ExcThread(monitor, started 140680689075968)>']
[2025-12-15 14:55:21] 2025-12-15 19:55:09,450 | INFO     | all workflow threads have been joined
[2025-12-15 14:55:21] 2025-12-15 19:55:09,450 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 14:55:21] 2025-12-15 19:55:09,451 | INFO     | traces error code: 0
[2025-12-15 14:55:21] 2025-12-15 19:55:09,451 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 14:55:21] 2025-12-15 19:55:20,773 | INFO     | PID=1426153 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-15 14:55:21] 2025-12-15 19:55:20,773 | INFO     | .. there are 10 such processes running
[2025-12-15 14:55:21] 2025-12-15 19:55:20,774 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 14:55:21] 2025-12-15 19:55:20,774 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 14:55:21] 2025-12-15 19:55:20,774 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 14:55:21] 2025-12-15 19:55:20,774 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 14:55:21] 2025-12-15 19:55:20,775 | CRITICAL | thread 'MainThread' is not alive
[2025-12-15 14:55:21] 2025-12-15 19:55:20,775 | INFO     | [monitor] control thread has ended
[2025-12-15 14:55:21] 2025-12-15 19:55:21,165 [wrapper] ==== pilot stdout END ====
[2025-12-15 14:55:21] 2025-12-15 19:55:21,203 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 14:55:21] 2025-12-15 19:55:21,219 [wrapper] pilotpid: 1426153
[2025-12-15 14:55:21] 2025-12-15 19:55:21,222 [wrapper] Pilot exit status: 0
[2025-12-15 14:55:21] 2025-12-15 19:55:21,287 [wrapper] pandaids: 6929410654
[2025-12-15 14:55:21] 2025-12-15 19:55:21,440 [wrapper] cleanup supervisor_pilot 3437434 1426154
[2025-12-15 14:55:21] 2025-12-15 19:55:21,447 [wrapper] Test setup, not cleaning
[2025-12-15 14:55:21] 2025-12-15 19:55:21,450 [wrapper] apfmon messages muted
[2025-12-15 14:55:21] 2025-12-15 19:55:21,452 [wrapper] ==== wrapper stdout END ====
[2025-12-15 14:55:21] 2025-12-15 19:55:21,454 [wrapper] ==== wrapper stderr END ====
[2025-12-15 14:55:21]  *** Error codes and diagnostics ***
[2025-12-15 14:55:21]     "exeErrorCode": 0,
[2025-12-15 14:55:21]     "exeErrorDiag": "",
[2025-12-15 14:55:21]     "pilotErrorCode": 0,
[2025-12-15 14:55:21]     "pilotErrorDiag": "",
[2025-12-15 14:55:21]  *** Listing of results directory ***
[2025-12-15 14:55:21] total 422200
[2025-12-15 14:55:21] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 23:46 pilot3.tar.gz
[2025-12-15 14:55:21] -rwx------. 1 boincer umatlas     36322 Dec 13 23:47 runpilot2-wrapper.sh
[2025-12-15 14:55:21] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 23:48 queuedata.json
[2025-12-15 14:55:21] -rw-r--r--. 1 boincer umatlas       100 Dec 15 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 14:55:21] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 15 00:02 run_atlas
[2025-12-15 14:55:21] -rw-r--r--. 1 boincer umatlas       105 Dec 15 00:02 job.xml
[2025-12-15 14:55:21] -rw-r--r--. 2 boincer umatlas 215180386 Dec 15 00:02 EVNT.47898833._000116.pool.root.1
[2025-12-15 14:55:21] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 00:02 start_atlas.sh
[2025-12-15 14:55:21] drwxrwx--x. 2 boincer umatlas      4096 Dec 15 00:02 shared
[2025-12-15 14:55:21] -rw-r--r--. 2 boincer umatlas    592400 Dec 15 00:02 input.tar.gz
[2025-12-15 14:55:21] -rw-r--r--. 1 boincer umatlas         0 Dec 15 00:02 boinc_lockfile
[2025-12-15 14:55:21] -rw-r--r--. 1 boincer umatlas      2550 Dec 15 00:02 pandaJob.out
[2025-12-15 14:55:21] -rw-------. 1 boincer umatlas        57 Dec 15 00:02 setup.sh.local
[2025-12-15 14:55:21] -rw-------. 1 boincer umatlas    991016 Dec 15 00:04 agis_schedconf.cvmfs.json
[2025-12-15 14:55:21] drwx------. 5 boincer umatlas      4096 Dec 15 00:04 pilot3
[2025-12-15 14:55:21] -rw-r--r--. 1 boincer umatlas      6906 Dec 15 14:48 init_data.xml
[2025-12-15 14:55:21] -rw-------. 1 boincer umatlas 197355931 Dec 15 14:52 HITS.47898836._002889.pool.root.1
[2025-12-15 14:55:21] -rw-r--r--. 1 boincer umatlas       531 Dec 15 14:53 boinc_task_state.xml
[2025-12-15 14:55:21] -rw-------. 1 boincer umatlas      1034 Dec 15 14:54 memory_monitor_summary.json
[2025-12-15 14:55:21] -rw-------. 1 boincer umatlas   1516240 Dec 15 14:54 agis_ddmendpoints.agis.ALL.json
[2025-12-15 14:55:21] -rw-------. 1 boincer umatlas    967989 Dec 15 14:54 log.47898836._002889.job.log.tgz.1
[2025-12-15 14:55:21] -rw-------. 1 boincer umatlas      7772 Dec 15 14:54 heartbeat.json
[2025-12-15 14:55:21] -rw-------. 1 boincer umatlas        95 Dec 15 14:55 pilot_heartbeat.json
[2025-12-15 14:55:21] -rw-------. 1 boincer umatlas       893 Dec 15 14:55 pilotlog.txt
[2025-12-15 14:55:21] -rw-------. 1 boincer umatlas   6971775 Dec 15 14:55 log.47898836._002889.job.log.1
[2025-12-15 14:55:21] -rw-r--r--. 1 boincer umatlas      8192 Dec 15 14:55 boinc_mmap_file
[2025-12-15 14:55:21] -rw-------. 1 boincer umatlas       357 Dec 15 14:55 output.list
[2025-12-15 14:55:21] -rw-r--r--. 1 boincer umatlas        28 Dec 15 14:55 wrapper_checkpoint.txt
[2025-12-15 14:55:21] -rw-r--r--. 1 boincer umatlas       620 Dec 15 14:55 runtime_log
[2025-12-15 14:55:21] -rw-------. 1 boincer umatlas   7956480 Dec 15 14:55 result.tar.gz
[2025-12-15 14:55:21] -rw-r--r--. 1 boincer umatlas      9343 Dec 15 14:55 runtime_log.err
[2025-12-15 14:55:21] -rw-------. 1 boincer umatlas       657 Dec 15 14:55 MGDODmVCto8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmchQKDmSOe4Po.diag
[2025-12-15 14:55:21] -rw-r--r--. 1 boincer umatlas     21301 Dec 15 14:55 stderr.txt
[2025-12-15 14:55:22] HITS file was successfully produced:
[2025-12-15 14:55:22] -rw-------. 1 boincer umatlas 197355931 Dec 15 14:52 shared/HITS.pool.root.1
[2025-12-15 14:55:22]  *** Contents of shared directory: ***
[2025-12-15 14:55:22] total 411248
[2025-12-15 14:55:22] -rw-r--r--. 2 boincer umatlas 215180386 Dec 15 00:02 ATLAS.root_0
[2025-12-15 14:55:22] -rw-r--r--. 2 boincer umatlas     15847 Dec 15 00:02 start_atlas.sh
[2025-12-15 14:55:22] -rw-r--r--. 2 boincer umatlas    592400 Dec 15 00:02 input.tar.gz
[2025-12-15 14:55:22] -rw-------. 1 boincer umatlas 197355931 Dec 15 14:52 HITS.pool.root.1
[2025-12-15 14:55:22] -rw-------. 1 boincer umatlas   7956480 Dec 15 14:55 result.tar.gz
14:55:43 (1408143): run_atlas exited; CPU time 45305.325463
14:55:43 (1408143): called boinc_finish(0)

</stderr_txt>
]]>

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