Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:38:35 (25101): wrapper (7.7.26015): starting
23:38:35 (25101): wrapper: running run_atlas (--nthreads 6)
[2025-12-14 23:38:35] Arguments: --nthreads 6
[2025-12-14 23:38:35] Threads: 6
[2025-12-14 23:38:35] Checking for CVMFS
[2025-12-14 23:38:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 23:38:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 23:38:35] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 23:38:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 23:38:35] 2.11.2.0 22587 29114 89708 154019 3 57 12816134 20275200 1 130560 0 10356776 99.900 1870440 41263 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 23:38:35] CVMFS is ok
[2025-12-14 23:38:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 23:38:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 23:38:35] Further information can be found at the LHC@home message board.
[2025-12-14 23:38:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 23:38:35] Checking for apptainer binary...
[2025-12-14 23:38:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 23:38:35] Running /usr/bin/apptainer --version
[2025-12-14 23:38:35] apptainer version 1.3.2-1.el7
[2025-12-14 23:38:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 23:38:36] c-205-13.aglt2.org
[2025-12-14 23:38:36] apptainer works
[2025-12-14 23:38:36] Set ATHENA_PROC_NUMBER=6
[2025-12-14 23:38:36] Set ATHENA_CORE_NUMBER=6
[2025-12-14 23:38:36] Starting ATLAS job with PandaID=6930755217
[2025-12-14 23:38:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 01:49:07]  *** The last 200 lines of the pilot log: ***
[2025-12-15 01:49:07] 2025-12-15 06:48:22,222 | INFO     | executing command: lscpu
[2025-12-15 01:49:07] 2025-12-15 06:48:22,246 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-15 01:49:07] 2025-12-15 06:48:23,394 | INFO     | time since job start (7773s) is within the limit (174528.0s)
[2025-12-15 01:49:07] 2025-12-15 06:48:23,912 | INFO     | monitor loop #593: job 0:6930755217 is in state 'finished'
[2025-12-15 01:49:07] 2025-12-15 06:48:23,912 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 01:49:07] 2025-12-15 06:48:25,400 | INFO     | time since job start (7775s) is within the limit (174528.0s)
[2025-12-15 01:49:07] 2025-12-15 06:48:26,415 | INFO     | monitor loop #594: job 0:6930755217 is in state 'finished'
[2025-12-15 01:49:07] 2025-12-15 06:48:26,415 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 01:49:07] 2025-12-15 06:48:27,406 | INFO     | time since job start (7777s) is within the limit (174528.0s)
[2025-12-15 01:49:07] 2025-12-15 06:48:28,052 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-15 01:49:07] 2025-12-15 06:48:28,056 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-12-15 01:49:07] 2025-12-15 06:48:28,058 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6930755217/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 01:49:07] 2025-12-15 06:48:28,059 | INFO     | extracted standard info from prmon json
[2025-12-15 01:49:07] 2025-12-15 06:48:28,059 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 01:49:07] 2025-12-15 06:48:28,059 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 01:49:07] 2025-12-15 06:48:28,060 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 01:49:07] 2025-12-15 06:48:28,060 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 01:49:07] 2025-12-15 06:48:28,062 | INFO     | fitting pss+swap vs Time
[2025-12-15 01:49:07] 2025-12-15 06:48:28,062 | INFO     | sum of square deviations: 635130048.0
[2025-12-15 01:49:07] 2025-12-15 06:48:28,063 | INFO     | sum of deviations: -6615821429.000002
[2025-12-15 01:49:07] 2025-12-15 06:48:28,063 | INFO     | mean x: 1765777399.0
[2025-12-15 01:49:07] 2025-12-15 06:48:28,063 | INFO     | mean y: 2452597.503937008
[2025-12-15 01:49:07] 2025-12-15 06:48:28,063 | INFO     | intersect: 18395643081.774784
[2025-12-15 01:49:07] 2025-12-15 06:48:28,064 | INFO     | chi2: 1.4402038579481706
[2025-12-15 01:49:07] 2025-12-15 06:48:28,064 | INFO     | sum of square deviations: 563026370.5
[2025-12-15 01:49:07] 2025-12-15 06:48:28,064 | INFO     | sum of deviations: -6056784916.0
[2025-12-15 01:49:07] 2025-12-15 06:48:28,065 | INFO     | mean x: 1765777246.5
[2025-12-15 01:49:07] 2025-12-15 06:48:28,065 | INFO     | mean y: 2453780.524590164
[2025-12-15 01:49:07] 2025-12-15 06:48:28,065 | INFO     | intersect: 18997892630.252876
[2025-12-15 01:49:07] 2025-12-15 06:48:28,065 | INFO     | chi2: 1.4391955428092136
[2025-12-15 01:49:07] 2025-12-15 06:48:28,065 | INFO     | current chi2=1.4391955428092136 (change=0.07001197319340445 %)
[2025-12-15 01:49:07] 2025-12-15 06:48:28,065 | INFO     | right removable region: 121
[2025-12-15 01:49:07] 2025-12-15 06:48:28,065 | INFO     | sum of square deviations: 563026370.5
[2025-12-15 01:49:07] 2025-12-15 06:48:28,066 | INFO     | sum of deviations: -22260206589.5
[2025-12-15 01:49:07] 2025-12-15 06:48:28,066 | INFO     | mean x: 1765777551.5
[2025-12-15 01:49:07] 2025-12-15 06:48:28,066 | INFO     | mean y: 2484959.9426229508
[2025-12-15 01:49:07] 2025-12-15 06:48:28,066 | INFO     | intersect: 69815508198.24133
[2025-12-15 01:49:07] 2025-12-15 06:48:28,067 | INFO     | chi2: 0.12651807976701102
[2025-12-15 01:49:07] 2025-12-15 06:48:28,067 | INFO     | current chi2=0.12651807976701102 (change=91.21526587581435 %)
[2025-12-15 01:49:07] 2025-12-15 06:48:28,067 | INFO     | sum of square deviations: 496597218.0
[2025-12-15 01:49:07] 2025-12-15 06:48:28,067 | INFO     | sum of deviations: -19143859299.000004
[2025-12-15 01:49:07] 2025-12-15 06:48:28,068 | INFO     | mean x: 1765777704.0
[2025-12-15 01:49:07] 2025-12-15 06:48:28,068 | INFO     | mean y: 2477787.9145299145
[2025-12-15 01:49:07] 2025-12-15 06:48:28,068 | INFO     | intersect: 68073338222.5118
[2025-12-15 01:49:07] 2025-12-15 06:48:28,068 | INFO     | chi2: 0.12562335400868418
[2025-12-15 01:49:07] 2025-12-15 06:48:28,068 | INFO     | current chi2=0.12562335400868418 (change=0.7071920155400006 %)
[2025-12-15 01:49:07] 2025-12-15 06:48:28,068 | INFO     | left removable region: 20
[2025-12-15 01:49:07] 2025-12-15 06:48:28,068 | INFO     | sum of square deviations: 319447850.0
[2025-12-15 01:49:07] 2025-12-15 06:48:28,069 | INFO     | sum of deviations: -10991851629.0
[2025-12-15 01:49:07] 2025-12-15 06:48:28,069 | INFO     | mean x: 1765777826.0
[2025-12-15 01:49:07] 2025-12-15 06:48:28,069 | INFO     | mean y: 2460218.2772277226
[2025-12-15 01:49:07] 2025-12-15 06:48:28,069 | INFO     | intersect: 60760946691.64112
[2025-12-15 01:49:07] 2025-12-15 06:48:28,069 | INFO     | chi2: 0.10605239573977335
[2025-12-15 01:49:07] 2025-12-15 06:48:28,070 | INFO     | current memory leak: -34.41 B/s (using 101 data points, chi2=0.11)
[2025-12-15 01:49:07] 2025-12-15 06:48:28,070 | INFO     | could have reported an average CPU frequency of 2032 MHz (8 samples)
[2025-12-15 01:49:07] 2025-12-15 06:48:28,070 | INFO     | ..............................
[2025-12-15 01:49:07] 2025-12-15 06:48:28,070 | INFO     | . Timing measurements:
[2025-12-15 01:49:07] 2025-12-15 06:48:28,070 | INFO     | . get job = 0 s
[2025-12-15 01:49:07] 2025-12-15 06:48:28,070 | INFO     | . initial setup = 2 s
[2025-12-15 01:49:07] 2025-12-15 06:48:28,070 | INFO     | . payload setup = 6 s
[2025-12-15 01:49:07] 2025-12-15 06:48:28,071 | INFO     | . stage-in = 0 s
[2025-12-15 01:49:07] 2025-12-15 06:48:28,071 | INFO     | . payload execution = 7743 s
[2025-12-15 01:49:07] 2025-12-15 06:48:28,071 | INFO     | . stage-out = 0 s
[2025-12-15 01:49:07] 2025-12-15 06:48:28,071 | INFO     | . log creation = 0 s
[2025-12-15 01:49:07] 2025-12-15 06:48:28,071 | INFO     | ..............................
[2025-12-15 01:49:07] 2025-12-15 06:48:28,150 | INFO     | 
[2025-12-15 01:49:07] 2025-12-15 06:48:28,150 | INFO     | job summary report
[2025-12-15 01:49:07] 2025-12-15 06:48:28,150 | INFO     | --------------------------------------------------
[2025-12-15 01:49:07] 2025-12-15 06:48:28,150 | INFO     | PanDA job id: 6930755217
[2025-12-15 01:49:07] 2025-12-15 06:48:28,150 | INFO     | task id: 47898878
[2025-12-15 01:49:07] 2025-12-15 06:48:28,151 | INFO     | errors: (none)
[2025-12-15 01:49:07] 2025-12-15 06:48:28,151 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 01:49:07] 2025-12-15 06:48:28,151 | INFO     | pilot state: finished 
[2025-12-15 01:49:07] 2025-12-15 06:48:28,151 | INFO     | transexitcode: 0
[2025-12-15 01:49:07] 2025-12-15 06:48:28,151 | INFO     | exeerrorcode: 0
[2025-12-15 01:49:07] 2025-12-15 06:48:28,151 | INFO     | exeerrordiag: 
[2025-12-15 01:49:07] 2025-12-15 06:48:28,152 | INFO     | exitcode: 0
[2025-12-15 01:49:07] 2025-12-15 06:48:28,152 | INFO     | exitmsg: OK
[2025-12-15 01:49:07] 2025-12-15 06:48:28,152 | INFO     | cpuconsumptiontime: 43941 s
[2025-12-15 01:49:07] 2025-12-15 06:48:28,152 | INFO     | nevents: 400
[2025-12-15 01:49:07] 2025-12-15 06:48:28,152 | INFO     | neventsw: 0
[2025-12-15 01:49:07] 2025-12-15 06:48:28,152 | INFO     | pid: 2932
[2025-12-15 01:49:07] 2025-12-15 06:48:28,153 | INFO     | pgrp: 2932
[2025-12-15 01:49:07] 2025-12-15 06:48:28,153 | INFO     | corecount: 6
[2025-12-15 01:49:07] 2025-12-15 06:48:28,153 | INFO     | event service: False
[2025-12-15 01:49:07] 2025-12-15 06:48:28,153 | INFO     | sizes: {0: 2283064, 1: 2283920, 5: 2284182, 12: 2284238, 7753: 2311876, 7754: 2321086, 7762: 2321224}
[2025-12-15 01:49:07] 2025-12-15 06:48:28,153 | INFO     | --------------------------------------------------
[2025-12-15 01:49:07] 2025-12-15 06:48:28,153 | INFO     | 
[2025-12-15 01:49:07] 2025-12-15 06:48:28,154 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-15 01:49:07] 2025-12-15 06:48:28,178 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 01:49:07] 2025-12-15 06:48:28,178 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 01:49:07] 2025-12-15 06:48:28,178 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 01:49:07] 2025-12-15 06:48:28,179 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 01:49:07] 2025-12-15 06:48:28,179 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 01:49:07] 2025-12-15 06:48:28,179 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 01:49:07] 2025-12-15 06:48:28,179 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 01:49:07] 2025-12-15 06:48:28,179 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 01:49:07] 2025-12-15 06:48:28,179 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 01:49:07] 2025-12-15 06:48:28,180 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 01:49:07] 2025-12-15 06:48:28,180 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 01:49:07] 2025-12-15 06:48:28,180 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 01:49:07] 2025-12-15 06:48:28,180 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 01:49:07] 2025-12-15 06:48:28,180 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 01:49:07] 2025-12-15 06:48:28,180 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 01:49:07] 2025-12-15 06:48:28,181 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 01:49:07] 2025-12-15 06:48:28,181 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 01:49:07] 2025-12-15 06:48:28,181 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 01:49:07] 2025-12-15 06:48:28,181 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 01:49:07] 2025-12-15 06:48:28,181 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 01:49:07] 2025-12-15 06:48:28,181 | INFO     | job 6930755217 has completed (purged errors)
[2025-12-15 01:49:07] 2025-12-15 06:48:28,182 | INFO     | overall cleanup function is called
[2025-12-15 01:49:07] 2025-12-15 06:48:28,526 | INFO     | PID=28790 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-15 01:49:07] 2025-12-15 06:48:29,189 | INFO     | --- collectZombieJob: --- 10, [2932]
[2025-12-15 01:49:07] 2025-12-15 06:48:29,196 | INFO     | zombie collector waiting for pid 2932
[2025-12-15 01:49:07] 2025-12-15 06:48:29,196 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 01:49:07] 2025-12-15 06:48:29,196 | INFO     | collected zombie processes
[2025-12-15 01:49:07] 2025-12-15 06:48:29,196 | INFO     | will attempt to kill all subprocesses of pid=2932
[2025-12-15 01:49:07] 2025-12-15 06:48:29,284 | INFO     | process IDs to be killed: [2932] (in reverse order)
[2025-12-15 01:49:07] 2025-12-15 06:48:29,343 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 01:49:07] 2025-12-15 06:48:29,343 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 01:49:07] 2025-12-15 06:48:29,346 | INFO     | did not find any defunct processes belonging to 2932
[2025-12-15 01:49:07] 2025-12-15 06:48:29,348 | INFO     | did not find any defunct processes belonging to 2932
[2025-12-15 01:49:07] 2025-12-15 06:48:29,348 | INFO     | ready for new job
[2025-12-15 01:49:07] 2025-12-15 06:48:29,348 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 01:49:07] 2025-12-15 06:48:29,350 | INFO     | ***************************************
[2025-12-15 01:49:07] 2025-12-15 06:48:29,350 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 01:49:07] 2025-12-15 06:48:29,350 | INFO     | ***************************************
[2025-12-15 01:49:07] 2025-12-15 06:48:29,350 | INFO     | 
[2025-12-15 01:49:07] 2025-12-15 06:48:29,351 | INFO     | architecture information:
[2025-12-15 01:49:07] 2025-12-15 06:48:29,351 | INFO     | executing command: cat /etc/os-release
[2025-12-15 01:49:07] 2025-12-15 06:48:29,367 | INFO     | cat /etc/os-release:
[2025-12-15 01:49:07] NAME="CentOS Linux"
[2025-12-15 01:49:07] VERSION="7 (Core)"
[2025-12-15 01:49:07] ID="centos"
[2025-12-15 01:49:07] ID_LIKE="rhel fedora"
[2025-12-15 01:49:07] VERSION_ID="7"
[2025-12-15 01:49:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 01:49:07] ANSI_COLOR="0;31"
[2025-12-15 01:49:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 01:49:07] HOME_URL="https://www.centos.org/"
[2025-12-15 01:49:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 01:49:07] 
[2025-12-15 01:49:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 01:49:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 01:49:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 01:49:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 01:49:07] 
[2025-12-15 01:49:07] 2025-12-15 06:48:29,367 | INFO     | ***************************************
[2025-12-15 01:49:07] 2025-12-15 06:48:29,870 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-15 01:49:07] 2025-12-15 06:48:29,886 | INFO     | sufficient remaining disk space (29419896832 B)
[2025-12-15 01:49:07] 2025-12-15 06:48:29,887 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 01:49:07] 2025-12-15 06:48:29,887 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 01:49:07] 2025-12-15 06:48:29,887 | INFO     | update_server=False
[2025-12-15 01:49:07] 2025-12-15 06:48:29,887 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 01:49:07] 2025-12-15 06:48:29,888 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 01:49:07] 2025-12-15 06:48:29,923 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 01:49:07] 2025-12-15 06:48:29,924 | INFO     | aborting loop
[2025-12-15 01:49:07] 2025-12-15 06:48:30,683 | INFO     | all data control threads have been joined
[2025-12-15 01:49:07] 2025-12-15 06:48:30,696 | INFO     | all payload control threads have been joined
[2025-12-15 01:49:07] 2025-12-15 06:48:30,745 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 01:49:07] 2025-12-15 06:48:30,824 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 01:49:07] 2025-12-15 06:48:30,870 | INFO     | all job control threads have been joined
[2025-12-15 01:49:07] 2025-12-15 06:48:30,889 | INFO     | [job] retrieve thread has finished
[2025-12-15 01:49:07] 2025-12-15 06:48:30,893 | INFO     | [job] queue monitor thread has finished
[2025-12-15 01:49:07] 2025-12-15 06:48:30,929 | INFO     | [job] job monitor thread has finished
[2025-12-15 01:49:07] 2025-12-15 06:48:31,017 | INFO     | [payload] validate_post thread has finished
[2025-12-15 01:49:07] 2025-12-15 06:48:31,489 | INFO     | [job] validate thread has finished
[2025-12-15 01:49:07] 2025-12-15 06:48:31,689 | INFO     | [data] control thread has finished
[2025-12-15 01:49:07] 2025-12-15 06:48:31,701 | INFO     | [payload] control thread has finished
[2025-12-15 01:49:07] 2025-12-15 06:48:31,714 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 01:49:07] 2025-12-15 06:48:31,715 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 01:49:07] 2025-12-15 06:48:31,841 | INFO     | [data] copytool_in thread has finished
[2025-12-15 01:49:07] 2025-12-15 06:48:31,875 | INFO     | [job] control thread has finished
[2025-12-15 01:49:07] 2025-12-15 06:48:31,908 | INFO     | [payload] failed_post thread has finished
[2025-12-15 01:49:07] 2025-12-15 06:48:32,073 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 01:49:07] 2025-12-15 06:48:32,200 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 01:49:07] 2025-12-15 06:48:32,750 | INFO     | [data] copytool_out thread has finished
[2025-12-15 01:49:07] 2025-12-15 06:48:34,829 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 01:49:07] 2025-12-15 06:49:00,412 | INFO     | [monitor] cgroup control has ended
[2025-12-15 01:49:07] 2025-12-15 06:49:00,723 | INFO     | PID=28790 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-15 01:49:07] 2025-12-15 06:49:00,724 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 01:49:07] 2025-12-15 06:49:00,724 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 01:49:07] 2025-12-15 06:49:00,724 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 01:49:07] 2025-12-15 06:49:02,078 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140134264260416)>', '<ExcThread(monitor, started 140133701510912)>']
[2025-12-15 01:49:07] 2025-12-15 06:49:02,731 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 01:49:07] 2025-12-15 06:49:02,731 | INFO     | [monitor] control thread has ended
[2025-12-15 01:49:07] 2025-12-15 06:49:07,104 | INFO     | all workflow threads have been joined
[2025-12-15 01:49:07] 2025-12-15 06:49:07,104 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 01:49:07] 2025-12-15 06:49:07,104 | INFO     | traces error code: 0
[2025-12-15 01:49:07] 2025-12-15 06:49:07,105 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 01:49:07] 2025-12-15 06:49:07,191 [wrapper] ==== pilot stdout END ====
[2025-12-15 01:49:07] 2025-12-15 06:49:07,195 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 01:49:07] 2025-12-15 06:49:07,199 [wrapper] pilotpid: 28790
[2025-12-15 01:49:07] 2025-12-15 06:49:07,203 [wrapper] Pilot exit status: 0
[2025-12-15 01:49:07] 2025-12-15 06:49:07,219 [wrapper] pandaids: 6930755217
[2025-12-15 01:49:07] 2025-12-15 06:49:07,259 [wrapper] cleanup supervisor_pilot 13490 28791
[2025-12-15 01:49:07] 2025-12-15 06:49:07,263 [wrapper] Test setup, not cleaning
[2025-12-15 01:49:07] 2025-12-15 06:49:07,267 [wrapper] apfmon messages muted
[2025-12-15 01:49:07] 2025-12-15 06:49:07,271 [wrapper] ==== wrapper stdout END ====
[2025-12-15 01:49:07] 2025-12-15 06:49:07,275 [wrapper] ==== wrapper stderr END ====
[2025-12-15 01:49:07]  *** Error codes and diagnostics ***
[2025-12-15 01:49:07]     "exeErrorCode": 0,
[2025-12-15 01:49:07]     "exeErrorDiag": "",
[2025-12-15 01:49:07]     "pilotErrorCode": 0,
[2025-12-15 01:49:07]     "pilotErrorDiag": "",
[2025-12-15 01:49:07]  *** Listing of results directory ***
[2025-12-15 01:49:07] total 370468
[2025-12-15 01:49:07] -rw-r--r-- 1 boincer umatlas    579449 Dec 14 13:53 pilot3.tar.gz
[2025-12-15 01:49:07] -rwx------ 1 boincer umatlas     36322 Dec 14 13:56 runpilot2-wrapper.sh
[2025-12-15 01:49:07] -rw-r--r-- 1 boincer umatlas      5112 Dec 14 13:58 queuedata.json
[2025-12-15 01:49:07] -rw-r--r-- 1 boincer umatlas       100 Dec 14 23:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 01:49:07] -rwxr-xr-x 1 boincer umatlas      7986 Dec 14 23:38 run_atlas
[2025-12-15 01:49:07] -rw-r--r-- 1 boincer umatlas       105 Dec 14 23:38 job.xml
[2025-12-15 01:49:07] -rw-r--r-- 2 boincer umatlas 194050696 Dec 14 23:38 EVNT.47898875._000044.pool.root.1
[2025-12-15 01:49:07] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 23:38 start_atlas.sh
[2025-12-15 01:49:07] drwxrwx--x 2 boincer umatlas      4096 Dec 14 23:38 shared
[2025-12-15 01:49:07] -rw-r--r-- 2 boincer umatlas    592400 Dec 14 23:38 input.tar.gz
[2025-12-15 01:49:07] -rw-r--r-- 1 boincer umatlas         0 Dec 14 23:38 boinc_lockfile
[2025-12-15 01:49:07] -rw-r--r-- 1 boincer umatlas      2499 Dec 14 23:38 pandaJob.out
[2025-12-15 01:49:07] -rw------- 1 boincer umatlas        57 Dec 14 23:38 setup.sh.local
[2025-12-15 01:49:07] -rw------- 1 boincer umatlas    991016 Dec 14 23:38 agis_schedconf.cvmfs.json
[2025-12-15 01:49:07] -rw------- 1 boincer umatlas   1516240 Dec 14 23:38 agis_ddmendpoints.agis.ALL.json
[2025-12-15 01:49:07] drwx------ 5 boincer umatlas      4096 Dec 14 23:38 pilot3
[2025-12-15 01:49:07] -rw-r--r-- 1 boincer umatlas      5953 Dec 15 01:45 init_data.xml
[2025-12-15 01:49:07] -rw------- 1 boincer umatlas 178482962 Dec 15 01:47 HITS.47898878._002122.pool.root.1
[2025-12-15 01:49:07] -rw-r--r-- 1 boincer umatlas       529 Dec 15 01:48 boinc_task_state.xml
[2025-12-15 01:49:07] -rw------- 1 boincer umatlas      1045 Dec 15 01:48 memory_monitor_summary.json
[2025-12-15 01:49:07] -rw------- 1 boincer umatlas    349838 Dec 15 01:48 log.47898878._002122.job.log.tgz.1
[2025-12-15 01:49:07] -rw------- 1 boincer umatlas      7845 Dec 15 01:48 heartbeat.json
[2025-12-15 01:49:07] -rw-r--r-- 1 boincer umatlas      8192 Dec 15 01:48 boinc_mmap_file
[2025-12-15 01:49:07] -rw-r--r-- 1 boincer umatlas        27 Dec 15 01:48 wrapper_checkpoint.txt
[2025-12-15 01:49:07] -rw------- 1 boincer umatlas        95 Dec 15 01:49 pilot_heartbeat.json
[2025-12-15 01:49:07] -rw------- 1 boincer umatlas      4746 Dec 15 01:49 pilotlog.txt
[2025-12-15 01:49:07] -rw------- 1 boincer umatlas   1106685 Dec 15 01:49 log.47898878._002122.job.log.1
[2025-12-15 01:49:07] -rw------- 1 boincer umatlas       357 Dec 15 01:49 output.list
[2025-12-15 01:49:07] -rw-r--r-- 1 boincer umatlas       620 Dec 15 01:49 runtime_log
[2025-12-15 01:49:07] -rw------- 1 boincer umatlas   1474560 Dec 15 01:49 result.tar.gz
[2025-12-15 01:49:07] -rw------- 1 boincer umatlas       659 Dec 15 01:49 YbgMDmFS6o8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmd9VKDmTiGTbm.diag
[2025-12-15 01:49:07] -rw-r--r-- 1 boincer umatlas      9342 Dec 15 01:49 runtime_log.err
[2025-12-15 01:49:07] -rw-r--r-- 1 boincer umatlas     21439 Dec 15 01:49 stderr.txt
[2025-12-15 01:49:07] HITS file was successfully produced:
[2025-12-15 01:49:07] -rw------- 1 boincer umatlas 178482962 Dec 15 01:47 shared/HITS.pool.root.1
[2025-12-15 01:49:07]  *** Contents of shared directory: ***
[2025-12-15 01:49:07] total 365844
[2025-12-15 01:49:07] -rw-r--r-- 2 boincer umatlas 194050696 Dec 14 23:38 ATLAS.root_0
[2025-12-15 01:49:07] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 23:38 start_atlas.sh
[2025-12-15 01:49:07] -rw-r--r-- 2 boincer umatlas    592400 Dec 14 23:38 input.tar.gz
[2025-12-15 01:49:07] -rw------- 1 boincer umatlas 178482962 Dec 15 01:47 HITS.pool.root.1
[2025-12-15 01:49:07] -rw------- 1 boincer umatlas   1474560 Dec 15 01:49 result.tar.gz
01:49:09 (25101): run_atlas exited; CPU time 43871.865874
01:49:09 (25101): called boinc_finish(0)

</stderr_txt>
]]>

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