Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-16 10:13:18 (30438): vboxwrapper version 26210
2025-12-16 10:13:18 (30438): BOINC client version: 8.2.5
2025-12-16 10:13:19 (30438): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2025-12-16 10:13:19 (30438): Detected: Sandbox Configuration Enabled
2025-12-16 10:13:19 (30438): Successfully copied 'init_data.xml' to the shared directory.
2025-12-16 10:13:20 (30438): Create VM. (boinc_8967ee1b151648b1, slot#2)
2025-12-16 10:13:20 (30438): Setting Memory Size for VM. (4800MB)
2025-12-16 10:13:20 (30438): Setting CPU Count for VM. (8)
2025-12-16 10:13:20 (30438): Setting Chipset Options for VM.
2025-12-16 10:13:20 (30438): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-16 10:13:21 (30438): Setting Boot Options for VM.
2025-12-16 10:13:21 (30438): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-16 10:13:21 (30438): Enabling VM Network Access.
2025-12-16 10:13:21 (30438): Disabling USB Support for VM.
2025-12-16 10:13:21 (30438): Disabling COM Port Support for VM.
2025-12-16 10:13:22 (30438): Disabling Audio Support for VM.
2025-12-16 10:13:22 (30438): Disabling Clipboard Support for VM.
2025-12-16 10:13:22 (30438): Disabling Drag and Drop Support for VM.
2025-12-16 10:13:22 (30438): Adding storage controller(s) to VM.
2025-12-16 10:13:22 (30438): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-16 10:13:23 (30438): Adding VirtualBox Guest Additions to VM.
2025-12-16 10:13:23 (30438): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-16 10:13:23 (30438): forwarding host port 54219 to guest port 80
2025-12-16 10:13:23 (30438): Enabling remote desktop for VM.
2025-12-16 10:13:24 (30438): Required extension pack not installed, remote desktop not enabled.
2025-12-16 10:13:24 (30438): Enabling shared directory for VM.
2025-12-16 10:13:24 (30438): Starting VM using VBoxManage interface. (boinc_8967ee1b151648b1, slot#2)
2025-12-16 10:13:28 (30438): Successfully started VM. (PID = '30521')
2025-12-16 10:13:28 (30438): Reporting VM Process ID to BOINC.
2025-12-16 10:13:28 (30438): Guest Log: BIOS: VirtualBox 7.0.20
2025-12-16 10:13:28 (30438): Guest Log: CPUID EDX: 0x178bfbff
2025-12-16 10:13:28 (30438): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-16 10:13:28 (30438): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-16 10:13:28 (30438): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-16 10:13:28 (30438): Detected: Web Application Enabled (http://localhost:54219)
2025-12-16 10:13:29 (30438): VM state change detected. (old = 'running', new = 'paused')
2025-12-16 10:13:44 (30438): Preference change detected
2025-12-16 10:13:44 (30438): Setting CPU throttle for VM. (100%)
2025-12-16 10:13:44 (30438): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-16 10:13:45 (30438): VM state change detected. (old = 'paused', new = 'running')
2025-12-16 10:13:46 (30438): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-16 10:13:46 (30438): Guest Log: BIOS: Booting from Hard Disk...
2025-12-16 10:13:52 (30438): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-16 10:13:52 (30438): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-16 10:13:52 (30438): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-16 10:14:00 (30438): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-16 10:14:00 (30438): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-12-16 10:14:11 (30438): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-16 10:14:11 (30438): Guest Log: 00:00:00.000242 main     Log opened 2025-12-16T01:13:54.227945000Z
2025-12-16 10:14:11 (30438): Guest Log: 00:00:00.000744 main     OS Product: Linux
2025-12-16 10:14:11 (30438): Guest Log: 00:00:00.000862 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-16 10:14:11 (30438): Guest Log: 00:00:00.000944 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-16 10:14:11 (30438): Guest Log: 00:00:00.001022 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-16 10:14:11 (30438): Guest Log: 00:00:00.001028 main     Process ID: 1369
2025-12-16 10:14:11 (30438): Guest Log: 00:00:00.001029 main     Package type: LINUX_64BITS_GENERIC
2025-12-16 10:14:11 (30438): Guest Log: 00:00:00.005834 main     5.2.32 r132073 started. Verbose level = 0
2025-12-16 10:14:12 (30438): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-16 10:14:12 (30438): Guest Log: [INFO] Mounting shared directory
2025-12-16 10:14:12 (30438): Guest Log: [INFO] Checking for init_data.xml
2025-12-16 10:15:49 (30438): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-16 10:15:49 (30438): Guest Log: [INFO] Detected branch: prod
2025-12-16 10:15:49 (30438): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-16 10:15:49 (30438): Guest Log: Copying input files
2025-12-16 10:15:53 (30438): Guest Log: Copied input files into RunAtlas.
2025-12-16 10:15:53 (30438): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-12-16 10:15:53 (30438): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-12-16 10:15:53 (30438): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-12-16 10:15:53 (30438): Guest Log: Further information can be found at the LHC@home message board.
2025-12-16 10:16:03 (30438): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-16 10:16:03 (30438): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-16 10:16:03 (30438): Guest Log: 2.6.3.0 1686 0 32204 154053 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-12-16 10:16:05 (30438): Guest Log: copied the webapp to /var/www
2025-12-16 10:16:05 (30438): Guest Log: ATHENA_PROC_NUMBER=8
2025-12-16 10:16:05 (30438): Guest Log: ATHENA_CORE_NUMBER=8
2025-12-16 10:16:05 (30438): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-16 10:16:05 (30438): Guest Log:  *** Starting ATLAS job. (PandaID=6929499705 taskID=47898763) ***
2025-12-16 11:24:31 (30438): VM state change detected. (old = 'running', new = 'paused')
2025-12-16 11:24:51 (30438): VM state change detected. (old = 'paused', new = 'running')
2025-12-16 11:25:02 (30438): VM state change detected. (old = 'running', new = 'paused')
2025-12-16 11:25:22 (30438): VM state change detected. (old = 'paused', new = 'running')
2025-12-16 11:54:28 (30438): Status Report: Elapsed Time: '6000.000000'
2025-12-16 11:54:28 (30438): Status Report: CPU Time: '34597.710000'
2025-12-16 13:31:46 (30438): VM state change detected. (old = 'running', new = 'paused')
2025-12-16 13:32:07 (30438): VM state change detected. (old = 'paused', new = 'running')
2025-12-16 13:34:51 (30438): Status Report: Elapsed Time: '12000.000000'
2025-12-16 13:34:51 (30438): Status Report: CPU Time: '73529.370000'
2025-12-16 14:34:45 (30438): Guest Log:  *** Job finished ***
2025-12-16 14:34:45 (30438): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-16 14:34:45 (30438): Guest Log: 2025-12-16 05:32:31,945 | INFO     | all workflow threads have been joined
2025-12-16 14:34:45 (30438): Guest Log: 2025-12-16 05:32:31,945 | INFO     | end of generic workflow (traces error code: 0)
2025-12-16 14:34:45 (30438): Guest Log: 2025-12-16 05:32:31,945 | INFO     | traces error code: 0
2025-12-16 14:34:45 (30438): Guest Log: 2025-12-16 05:32:31,946 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-16 14:34:45 (30438): Guest Log: 2025-12-16 05:32:51,539 | INFO     | PID=6118 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-12-16 14:34:45 (30438): Guest Log: 2025-12-16 05:32:51,541 | INFO     | found 0 job(s) in 20 queues
2025-12-16 14:34:45 (30438): Guest Log: 2025-12-16 05:32:51,541 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-12-16 14:34:45 (30438): Guest Log: 2025-12-16 05:32:51,541 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-12-16 14:34:45 (30438): Guest Log: 2025-12-16 05:32:51,541 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-16 14:34:45 (30438): Guest Log: 2025-12-16 05:32:51,542 | INFO     | [monitor] control thread has ended
2025-12-16 14:34:45 (30438): Guest Log: 2025-12-16 05:32:51,749 [wrapper] ==== pilot stdout END ====
2025-12-16 14:34:45 (30438): Guest Log: 2025-12-16 05:32:51,771 [wrapper] ==== wrapper stdout RESUME ====
2025-12-16 14:34:45 (30438): Guest Log: 2025-12-16 05:32:51,801 [wrapper] pilotpid: 6118
2025-12-16 14:34:45 (30438): Guest Log: 2025-12-16 05:32:51,822 [wrapper] Pilot exit status: 0
2025-12-16 14:34:45 (30438): Guest Log: 2025-12-16 05:32:51,929 [wrapper] pandaids: 6929499705
2025-12-16 14:34:45 (30438): Guest Log: 2025-12-16 05:32:52,045 [wrapper] cleanup supervisor_pilot 10986 6119
2025-12-16 14:34:45 (30438): Guest Log: 2025-12-16 05:32:52,064 [wrapper] Test setup, not cleaning
2025-12-16 14:34:45 (30438): Guest Log: 2025-12-16 05:32:52,083 [wrapper] apfmon messages muted
2025-12-16 14:34:45 (30438): Guest Log: 2025-12-16 05:32:52,101 [wrapper] ==== wrapper stdout END ====
2025-12-16 14:34:45 (30438): Guest Log: 2025-12-16 05:32:52,117 [wrapper] ==== wrapper stderr END ====
2025-12-16 14:34:45 (30438): Guest Log:  *** Error codes and diagnostics ***
2025-12-16 14:34:45 (30438): Guest Log:     "exeErrorCode": 0,
2025-12-16 14:34:45 (30438): Guest Log:     "exeErrorDiag": "",
2025-12-16 14:34:45 (30438): Guest Log:     "pilotErrorCode": 0,
2025-12-16 14:34:45 (30438): Guest Log:     "pilotErrorDiag": "",
2025-12-16 14:34:45 (30438): Guest Log:  *** Listing of results directory ***
2025-12-16 14:34:45 (30438): Guest Log: total 223432
2025-12-16 14:34:45 (30438): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Dec 14 23:13 pilot3.tar.gz
2025-12-16 14:34:45 (30438): Guest Log: -rwx------. 1 atlas atlas     36322 Dec 14 23:16 runpilot2-wrapper.sh
2025-12-16 14:34:45 (30438): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Dec 14 23:18 queuedata.json
2025-12-16 14:34:45 (30438): Guest Log: -rw-r-----. 1 atlas atlas     15847 Dec 16 01:15 start_atlas.sh
2025-12-16 14:34:45 (30438): Guest Log: -rw-r-----. 1 atlas atlas    592395 Dec 16 01:15 input.tar.gz
2025-12-16 14:34:45 (30438): Guest Log: -rw-r--r--. 1 atlas atlas      7401 Dec 16 01:15 init_data.xml
2025-12-16 14:34:45 (30438): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec 16 01:15 EVNT.47898761._000416.pool.root.1 -> /data/./ATLAS.root_0
2025-12-16 14:34:45 (30438): Guest Log: -rw-r--r--. 1 atlas atlas      2508 Dec 16 01:15 pandaJob.out
2025-12-16 14:34:45 (30438): Guest Log: -rw-------. 1 atlas atlas    994531 Dec 16 01:16 agis_schedconf.cvmfs.json
2025-12-16 14:34:45 (30438): Guest Log: drwx------. 5 atlas atlas      4096 Dec 16 01:17 pilot3
2025-12-16 14:34:45 (30438): Guest Log: -rw-------. 1 atlas atlas 220857605 Dec 16 05:30 HITS.47898763._013266.pool.root.1
2025-12-16 14:34:45 (30438): Guest Log: -rw-------. 1 atlas atlas      1034 Dec 16 05:31 memory_monitor_summary.json
2025-12-16 14:34:45 (30438): Guest Log: -rw-------. 1 atlas atlas   1516240 Dec 16 05:31 agis_ddmendpoints.agis.ALL.json
2025-12-16 14:34:45 (30438): Guest Log: -rw-------. 1 atlas atlas    435886 Dec 16 05:31 log.47898763._013266.job.log.tgz.1
2025-12-16 14:34:45 (30438): Guest Log: -rw-------. 1 atlas atlas      7830 Dec 16 05:32 heartbeat.json
2025-12-16 14:34:45 (30438): Guest Log: -rw-------. 1 atlas atlas        95 Dec 16 05:32 pilot_heartbeat.json
2025-12-16 14:34:45 (30438): Guest Log: -rw-------. 1 atlas atlas       744 Dec 16 05:32 pilotlog.txt
2025-12-16 14:34:45 (30438): Guest Log: -rw-------. 1 atlas atlas   1611991 Dec 16 05:32 log.47898763._013266.job.log.1
2025-12-16 14:34:45 (30438): Guest Log: -rw-------. 1 atlas atlas       357 Dec 16 05:32 output.list
2025-12-16 14:34:45 (30438): Guest Log: -rw-r--r--. 1 atlas atlas       620 Dec 16 05:32 runtime_log
2025-12-16 14:34:45 (30438): Guest Log: -rw-------. 1 atlas atlas   2068480 Dec 16 05:32 result.tar.gz
2025-12-16 14:34:45 (30438): Guest Log: -rw-r--r--. 1 atlas atlas      8762 Dec 16 05:32 runtime_log.err
2025-12-16 14:34:45 (30438): Guest Log: -rw-------. 1 atlas atlas       664 Dec 16 05:32 9ClNDmuVAp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmofWKDmxOA1Zm.diag
2025-12-16 14:34:45 (30438): Guest Log: Looking for outputfile HITS.47898763._013266.pool.root.1
2025-12-16 14:34:45 (30438): Guest Log: HITS file was successfully produced
2025-12-16 14:34:45 (30438): Guest Log: -rw-------. 1 atlas atlas 220857605 Dec 16 05:30 /home/atlas/RunAtlas/HITS.47898763._013266.pool.root.1
2025-12-16 14:34:46 (30438): Guest Log: Successfully finished the ATLAS job!
2025-12-16 14:34:46 (30438): Guest Log: Copying the results back to the shared directory!
2025-12-16 14:34:46 (30438): Guest Log:  *** Contents of shared directory: ***
2025-12-16 14:34:46 (30438): Guest Log: total 221796
2025-12-16 14:34:46 (30438): Guest Log: -rw-rw----. 1 root root 224431219 Dec 16 01:13 ATLAS.root_0
2025-12-16 14:34:46 (30438): Guest Log: -rw-rw-r--. 1 root root      7401 Dec 16 01:13 init_data.xml
2025-12-16 14:34:46 (30438): Guest Log: -rw-rw----. 1 root root    592395 Dec 16 01:13 input.tar.gz
2025-12-16 14:34:46 (30438): Guest Log: -rw-r--r--. 1 root root   2068480 Dec 16  2025 result.tar.gz
2025-12-16 14:34:46 (30438): Guest Log: -rw-rw----. 1 root root     15847 Dec 16 01:13 start_atlas.sh
2025-12-16 14:34:46 (30438): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-16 14:34:46 (30438): VM Completion File Detected.
2025-12-16 14:34:46 (30438): Powering off VM.
2025-12-16 14:34:47 (30438): Successfully stopped VM.
2025-12-16 14:34:47 (30438): Deregistering VM. (boinc_8967ee1b151648b1, slot#2)
2025-12-16 14:34:47 (30438): Removing network bandwidth throttle group from VM.
2025-12-16 14:34:47 (30438): Removing VM from VirtualBox.
2025-12-16 14:34:52 (30438): called boinc_finish(0)

</stderr_txt>
]]>

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