Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:47:51 (17712): wrapper (7.7.26015): starting
08:47:51 (17712): wrapper: running run_atlas (--nthreads 8)
[2025-12-15 08:47:51] Arguments: --nthreads 8
[2025-12-15 08:47:51] Threads: 8
[2025-12-15 08:47:51] Checking for CVMFS
[2025-12-15 08:47:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 08:47:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 08:47:52] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 08:47:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 08:47:52] 2.11.2.0 31726 312287 190396 154023 3 275 16420207 25165825 4082 130560 9 153081887 99.870 86216864 2576 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-15 08:47:52] CVMFS is ok
[2025-12-15 08:47:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 08:47:52] Checking for apptainer binary...
[2025-12-15 08:47:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 08:47:52] Running /usr/bin/apptainer --version
[2025-12-15 08:47:53] apptainer version 1.3.2-1.el7
[2025-12-15 08:47:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 08:48:06] cg-vwn427.simple-grid.lan
[2025-12-15 08:48:06] apptainer works
[2025-12-15 08:48:06] Set ATHENA_PROC_NUMBER=8
[2025-12-15 08:48:06] Set ATHENA_CORE_NUMBER=8
[2025-12-15 08:48:06] Starting ATLAS job with PandaID=6929522790
[2025-12-15 08:48:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 12:19:49]  *** The last 200 lines of the pilot log: ***
[2025-12-15 12:19:49] 2025-12-15 11:19:35,537 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-15 12:19:49] 2025-12-15 11:19:35,538 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-15 12:19:49] 2025-12-15 11:19:35,538 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6929522790/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 12:19:49] 2025-12-15 11:19:35,539 | INFO     | extracted standard info from prmon json
[2025-12-15 12:19:49] 2025-12-15 11:19:35,539 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 12:19:49] 2025-12-15 11:19:35,539 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 12:19:49] 2025-12-15 11:19:35,539 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 12:19:49] 2025-12-15 11:19:35,539 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 12:19:49] 2025-12-15 11:19:35,541 | INFO     | fitting pss+swap vs Time
[2025-12-15 12:19:49] 2025-12-15 11:19:35,541 | INFO     | sum of square deviations: 1931608310.0
[2025-12-15 12:19:49] 2025-12-15 11:19:35,542 | INFO     | sum of deviations: 55279897843.5
[2025-12-15 12:19:49] 2025-12-15 11:19:35,542 | INFO     | mean x: 1765791145.5
[2025-12-15 12:19:49] 2025-12-15 11:19:35,542 | INFO     | mean y: 2463069.711956522
[2025-12-15 12:19:49] 2025-12-15 11:19:35,542 | INFO     | intersect: -50531982050.89163
[2025-12-15 12:19:49] 2025-12-15 11:19:35,542 | INFO     | chi2: 5.300222423885613
[2025-12-15 12:19:49] 2025-12-15 11:19:35,542 | INFO     | sum of square deviations: 1778377530.0
[2025-12-15 12:19:49] 2025-12-15 11:19:35,543 | INFO     | sum of deviations: 53788410481.0
[2025-12-15 12:19:49] 2025-12-15 11:19:35,543 | INFO     | mean x: 1765790993.0
[2025-12-15 12:19:49] 2025-12-15 11:19:35,543 | INFO     | mean y: 2461584.9776536315
[2025-12-15 12:19:49] 2025-12-15 11:19:35,543 | INFO     | intersect: -53405259302.688194
[2025-12-15 12:19:49] 2025-12-15 11:19:35,543 | INFO     | chi2: 5.312441284295681
[2025-12-15 12:19:49] 2025-12-15 11:19:35,543 | INFO     | current chi2=5.312441284295681 (change=-0.2305348612353267 %)
[2025-12-15 12:19:49] 2025-12-15 11:19:35,543 | INFO     | right removable region: 178
[2025-12-15 12:19:49] 2025-12-15 11:19:35,543 | INFO     | sum of square deviations: 1778377530.0
[2025-12-15 12:19:49] 2025-12-15 11:19:35,544 | INFO     | sum of deviations: -5071713545.000004
[2025-12-15 12:19:49] 2025-12-15 11:19:35,544 | INFO     | mean x: 1765791298.0
[2025-12-15 12:19:49] 2025-12-15 11:19:35,544 | INFO     | mean y: 2523045.122905028
[2025-12-15 12:19:49] 2025-12-15 11:19:35,544 | INFO     | intersect: 5038342207.609589
[2025-12-15 12:19:49] 2025-12-15 11:19:35,544 | INFO     | chi2: 0.9332384676563301
[2025-12-15 12:19:49] 2025-12-15 11:19:35,544 | INFO     | current chi2=0.9332384676563301 (change=82.39246595669906 %)
[2025-12-15 12:19:49] 2025-12-15 11:19:35,544 | INFO     | sum of square deviations: 1633472487.5
[2025-12-15 12:19:49] 2025-12-15 11:19:35,545 | INFO     | sum of deviations: -26073543296.0
[2025-12-15 12:19:49] 2025-12-15 11:19:35,545 | INFO     | mean x: 1765791450.5
[2025-12-15 12:19:49] 2025-12-15 11:19:35,545 | INFO     | mean y: 2544907.9770114943
[2025-12-15 12:19:49] 2025-12-15 11:19:35,545 | INFO     | intersect: 28188167983.13664
[2025-12-15 12:19:49] 2025-12-15 11:19:35,545 | INFO     | chi2: 0.1636316054425831
[2025-12-15 12:19:49] 2025-12-15 11:19:35,545 | INFO     | current chi2=0.1636316054425831 (change=82.46626011318243 %)
[2025-12-15 12:19:49] 2025-12-15 11:19:35,545 | INFO     | sum of square deviations: 1496660620.0
[2025-12-15 12:19:49] 2025-12-15 11:19:35,546 | INFO     | sum of deviations: -24998217423.0
[2025-12-15 12:19:49] 2025-12-15 11:19:35,546 | INFO     | mean x: 1765791603.0
[2025-12-15 12:19:49] 2025-12-15 11:19:35,546 | INFO     | mean y: 2543649.7869822485
[2025-12-15 12:19:49] 2025-12-15 11:19:35,546 | INFO     | intersect: 29495965087.909473
[2025-12-15 12:19:49] 2025-12-15 11:19:35,546 | INFO     | chi2: 0.14792768505575796
[2025-12-15 12:19:49] 2025-12-15 11:19:35,546 | INFO     | current chi2=0.14792768505575796 (change=9.597119299997033 %)
[2025-12-15 12:19:49] 2025-12-15 11:19:35,546 | INFO     | left removable region: 30
[2025-12-15 12:19:49] 2025-12-15 11:19:35,546 | INFO     | sum of square deviations: 1005179777.0
[2025-12-15 12:19:49] 2025-12-15 11:19:35,547 | INFO     | sum of deviations: -8946781702.500002
[2025-12-15 12:19:49] 2025-12-15 11:19:35,547 | INFO     | mean x: 1765791877.5
[2025-12-15 12:19:49] 2025-12-15 11:19:35,547 | INFO     | mean y: 2523921.358108108
[2025-12-15 12:19:49] 2025-12-15 11:19:35,547 | INFO     | intersect: 15719269145.968935
[2025-12-15 12:19:49] 2025-12-15 11:19:35,547 | INFO     | chi2: 0.09668509594350765
[2025-12-15 12:19:49] 2025-12-15 11:19:35,547 | INFO     | current memory leak: -8.90 B/s (using 148 data points, chi2=0.10)
[2025-12-15 12:19:49] 2025-12-15 11:19:35,547 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2025-12-15 12:19:49] 2025-12-15 11:19:35,547 | INFO     | ..............................
[2025-12-15 12:19:49] 2025-12-15 11:19:35,547 | INFO     | . Timing measurements:
[2025-12-15 12:19:49] 2025-12-15 11:19:35,547 | INFO     | . get job = 0 s
[2025-12-15 12:19:49] 2025-12-15 11:19:35,547 | INFO     | . initial setup = 12 s
[2025-12-15 12:19:49] 2025-12-15 11:19:35,547 | INFO     | . payload setup = 135 s
[2025-12-15 12:19:49] 2025-12-15 11:19:35,547 | INFO     | . stage-in = 0 s
[2025-12-15 12:19:49] 2025-12-15 11:19:35,547 | INFO     | . payload execution = 11375 s
[2025-12-15 12:19:49] 2025-12-15 11:19:35,547 | INFO     | . stage-out = 277 s
[2025-12-15 12:19:49] 2025-12-15 11:19:35,548 | INFO     | . log creation = 0 s
[2025-12-15 12:19:49] 2025-12-15 11:19:35,548 | INFO     | ..............................
[2025-12-15 12:19:49] 2025-12-15 11:19:35,597 | INFO     | 
[2025-12-15 12:19:49] 2025-12-15 11:19:35,597 | INFO     | job summary report
[2025-12-15 12:19:49] 2025-12-15 11:19:35,597 | INFO     | --------------------------------------------------
[2025-12-15 12:19:49] 2025-12-15 11:19:35,597 | INFO     | PanDA job id: 6929522790
[2025-12-15 12:19:49] 2025-12-15 11:19:35,597 | INFO     | task id: 47898826
[2025-12-15 12:19:49] 2025-12-15 11:19:35,597 | INFO     | errors: (none)
[2025-12-15 12:19:49] 2025-12-15 11:19:35,597 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 12:19:49] 2025-12-15 11:19:35,597 | INFO     | pilot state: finished 
[2025-12-15 12:19:49] 2025-12-15 11:19:35,597 | INFO     | transexitcode: 0
[2025-12-15 12:19:49] 2025-12-15 11:19:35,597 | INFO     | exeerrorcode: 0
[2025-12-15 12:19:49] 2025-12-15 11:19:35,598 | INFO     | exeerrordiag: 
[2025-12-15 12:19:49] 2025-12-15 11:19:35,598 | INFO     | exitcode: 0
[2025-12-15 12:19:49] 2025-12-15 11:19:35,598 | INFO     | exitmsg: OK
[2025-12-15 12:19:49] 2025-12-15 11:19:35,598 | INFO     | cpuconsumptiontime: 60183 s
[2025-12-15 12:19:49] 2025-12-15 11:19:35,598 | INFO     | nevents: 400
[2025-12-15 12:19:49] 2025-12-15 11:19:35,598 | INFO     | neventsw: 0
[2025-12-15 12:19:49] 2025-12-15 11:19:35,598 | INFO     | pid: 28037
[2025-12-15 12:19:49] 2025-12-15 11:19:35,598 | INFO     | pgrp: 28037
[2025-12-15 12:19:49] 2025-12-15 11:19:35,598 | INFO     | corecount: 8
[2025-12-15 12:19:49] 2025-12-15 11:19:35,598 | INFO     | event service: False
[2025-12-15 12:19:49] 2025-12-15 11:19:35,598 | INFO     | sizes: {0: 2283128, 1: 2283814, 2: 2284013, 3: 2284013, 13: 2284041, 24: 2284097, 35: 2284253, 45: 2284281, 56: 2284309, 67: 2284337, 78: 2284365, 88: 2284701, 99:
[2025-12-15 12:19:49] 2025-12-15 11:19:35,598 | INFO     | --------------------------------------------------
[2025-12-15 12:19:49] 2025-12-15 11:19:35,598 | INFO     | 
[2025-12-15 12:19:49] 2025-12-15 11:19:35,598 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-12-15 12:19:49] 2025-12-15 11:19:35,610 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 12:19:49] 2025-12-15 11:19:35,610 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 12:19:49] 2025-12-15 11:19:35,610 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 12:19:49] 2025-12-15 11:19:35,610 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 12:19:49] 2025-12-15 11:19:35,610 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 12:19:49] 2025-12-15 11:19:35,610 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 12:19:49] 2025-12-15 11:19:35,610 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 12:19:49] 2025-12-15 11:19:35,610 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 12:19:49] 2025-12-15 11:19:35,610 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 12:19:49] 2025-12-15 11:19:35,610 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 12:19:49] 2025-12-15 11:19:35,610 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 12:19:49] 2025-12-15 11:19:35,610 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 12:19:49] 2025-12-15 11:19:35,610 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 12:19:49] 2025-12-15 11:19:35,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 12:19:49] 2025-12-15 11:19:35,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 12:19:49] 2025-12-15 11:19:35,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 12:19:49] 2025-12-15 11:19:35,611 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 12:19:49] 2025-12-15 11:19:35,611 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 12:19:49] 2025-12-15 11:19:35,611 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 12:19:49] 2025-12-15 11:19:35,611 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 12:19:49] 2025-12-15 11:19:35,611 | INFO     | job 6929522790 has completed (purged errors)
[2025-12-15 12:19:49] 2025-12-15 11:19:35,611 | INFO     | overall cleanup function is called
[2025-12-15 12:19:49] 2025-12-15 11:19:36,618 | INFO     | --- collectZombieJob: --- 10, [28037]
[2025-12-15 12:19:49] 2025-12-15 11:19:36,618 | INFO     | zombie collector waiting for pid 28037
[2025-12-15 12:19:49] 2025-12-15 11:19:36,618 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 12:19:49] 2025-12-15 11:19:36,618 | INFO     | collected zombie processes
[2025-12-15 12:19:49] 2025-12-15 11:19:36,618 | INFO     | will attempt to kill all subprocesses of pid=28037
[2025-12-15 12:19:49] 2025-12-15 11:19:36,643 | INFO     | process IDs to be killed: [28037] (in reverse order)
[2025-12-15 12:19:49] 2025-12-15 11:19:36,665 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 12:19:49] 2025-12-15 11:19:36,666 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 12:19:49] 2025-12-15 11:19:36,666 | INFO     | did not find any defunct processes belonging to 28037
[2025-12-15 12:19:49] 2025-12-15 11:19:36,667 | INFO     | did not find any defunct processes belonging to 28037
[2025-12-15 12:19:49] 2025-12-15 11:19:36,667 | INFO     | ready for new job
[2025-12-15 12:19:49] 2025-12-15 11:19:36,667 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 12:19:49] 2025-12-15 11:19:36,668 | INFO     | ***************************************
[2025-12-15 12:19:49] 2025-12-15 11:19:36,668 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 12:19:49] 2025-12-15 11:19:36,669 | INFO     | ***************************************
[2025-12-15 12:19:49] 2025-12-15 11:19:36,669 | INFO     | 
[2025-12-15 12:19:49] 2025-12-15 11:19:36,669 | INFO     | pilot is running in a VM
[2025-12-15 12:19:49] 2025-12-15 11:19:36,669 | INFO     | architecture information:
[2025-12-15 12:19:49] 2025-12-15 11:19:36,669 | INFO     | executing command: cat /etc/os-release
[2025-12-15 12:19:49] 2025-12-15 11:19:36,677 | INFO     | cat /etc/os-release:
[2025-12-15 12:19:49] NAME="CentOS Linux"
[2025-12-15 12:19:49] VERSION="7 (Core)"
[2025-12-15 12:19:49] ID="centos"
[2025-12-15 12:19:49] ID_LIKE="rhel fedora"
[2025-12-15 12:19:49] VERSION_ID="7"
[2025-12-15 12:19:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 12:19:49] ANSI_COLOR="0;31"
[2025-12-15 12:19:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 12:19:49] HOME_URL="https://www.centos.org/"
[2025-12-15 12:19:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 12:19:49] 
[2025-12-15 12:19:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 12:19:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 12:19:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 12:19:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 12:19:49] 
[2025-12-15 12:19:49] 2025-12-15 11:19:36,677 | INFO     | ***************************************
[2025-12-15 12:19:49] 2025-12-15 11:19:37,180 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-12-15 12:19:49] 2025-12-15 11:19:37,189 | INFO     | sufficient remaining disk space (498129174528 B)
[2025-12-15 12:19:49] 2025-12-15 11:19:37,189 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 12:19:49] 2025-12-15 11:19:37,189 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 12:19:49] 2025-12-15 11:19:37,189 | INFO     | update_server=False
[2025-12-15 12:19:49] 2025-12-15 11:19:37,189 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 12:19:49] 2025-12-15 11:19:37,189 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 12:19:49] 2025-12-15 11:19:37,189 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-15 12:19:49] 2025-12-15 11:19:37,190 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 12:19:49] 2025-12-15 11:19:37,190 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 12:19:49] 2025-12-15 11:19:37,190 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 12:19:49] 2025-12-15 11:19:37,209 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-15 12:19:49] 2025-12-15 11:19:37,210 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-15 12:19:49] 2025-12-15 11:19:37,210 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 12:19:49] 2025-12-15 11:19:37,210 | INFO     | will abort loop
[2025-12-15 12:19:49] 2025-12-15 11:19:37,290 | INFO     | all payload control threads have been joined
[2025-12-15 12:19:49] 2025-12-15 11:19:37,582 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 12:19:49] 2025-12-15 11:19:37,930 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 12:19:49] 2025-12-15 11:19:38,002 | INFO     | all job control threads have been joined
[2025-12-15 12:19:49] 2025-12-15 11:19:38,194 | INFO     | [job] retrieve thread has finished
[2025-12-15 12:19:49] 2025-12-15 11:19:38,195 | INFO     | [job] queue monitor thread has finished
[2025-12-15 12:19:49] 2025-12-15 11:19:38,214 | INFO     | [job] job monitor thread has finished
[2025-12-15 12:19:49] 2025-12-15 11:19:38,220 | INFO     | all data control threads have been joined
[2025-12-15 12:19:49] 2025-12-15 11:19:38,280 | INFO     | [payload] validate_post thread has finished
[2025-12-15 12:19:49] 2025-12-15 11:19:38,296 | INFO     | [payload] control thread has finished
[2025-12-15 12:19:49] 2025-12-15 11:19:38,439 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 12:19:49] 2025-12-15 11:19:38,690 | INFO     | [payload] failed_post thread has finished
[2025-12-15 12:19:49] 2025-12-15 11:19:39,007 | INFO     | [job] control thread has finished
[2025-12-15 12:19:49] 2025-12-15 11:19:39,130 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 12:19:49] 2025-12-15 11:19:39,133 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 12:19:49] 2025-12-15 11:19:39,225 | INFO     | [data] control thread has finished
[2025-12-15 12:19:49] 2025-12-15 11:19:39,513 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 12:19:49] 2025-12-15 11:19:39,532 | INFO     | [data] copytool_in thread has finished
[2025-12-15 12:19:49] 2025-12-15 11:19:39,557 | INFO     | [job] validate thread has finished
[2025-12-15 12:19:49] 2025-12-15 11:19:39,586 | INFO     | [data] copytool_out thread has finished
[2025-12-15 12:19:49] 2025-12-15 11:19:41,931 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 12:19:49] 2025-12-15 11:19:43,952 | INFO     | [monitor] cgroup control has ended
[2025-12-15 12:19:49] 2025-12-15 11:19:44,022 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140282690598720)>', '<ExcThread(monitor, started 140281953384192)>']
[2025-12-15 12:19:49] 2025-12-15 11:19:44,225 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 12:19:49] 2025-12-15 11:19:44,225 | INFO     | [monitor] control thread has ended
[2025-12-15 12:19:49] 2025-12-15 11:19:49,047 | INFO     | all workflow threads have been joined
[2025-12-15 12:19:49] 2025-12-15 11:19:49,048 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 12:19:49] 2025-12-15 11:19:49,048 | INFO     | traces error code: 0
[2025-12-15 12:19:49] 2025-12-15 11:19:49,048 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 12:19:49] 2025-12-15 11:19:49,106 [wrapper] ==== pilot stdout END ====
[2025-12-15 12:19:49] 2025-12-15 11:19:49,108 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 12:19:49] 2025-12-15 11:19:49,109 [wrapper] pilotpid: 21501
[2025-12-15 12:19:49] 2025-12-15 11:19:49,111 [wrapper] Pilot exit status: 0
[2025-12-15 12:19:49] 2025-12-15 11:19:49,118 [wrapper] pandaids: 6929522790
[2025-12-15 12:19:49] 2025-12-15 11:19:49,132 [wrapper] cleanup supervisor_pilot 28616 21502
[2025-12-15 12:19:49] 2025-12-15 11:19:49,136 [wrapper] Test setup, not cleaning
[2025-12-15 12:19:49] 2025-12-15 11:19:49,138 [wrapper] apfmon messages muted
[2025-12-15 12:19:49] 2025-12-15 11:19:49,139 [wrapper] ==== wrapper stdout END ====
[2025-12-15 12:19:49] 2025-12-15 11:19:49,141 [wrapper] ==== wrapper stderr END ====
[2025-12-15 12:19:49]  *** Error codes and diagnostics ***
[2025-12-15 12:19:49]     "exeErrorCode": 0,
[2025-12-15 12:19:49]     "exeErrorDiag": "",
[2025-12-15 12:19:49]     "pilotErrorCode": 0,
[2025-12-15 12:19:49]     "pilotErrorDiag": "",
[2025-12-15 12:19:49]  *** Listing of results directory ***
[2025-12-15 12:19:49] total 444236
[2025-12-15 12:19:49] -rw-r--r--. 1 boinc boinc      5112 Dec 15 00:13 queuedata.json
[2025-12-15 12:19:49] -rw-r--r--. 1 boinc boinc    579449 Dec 15 00:13 pilot3.tar.gz
[2025-12-15 12:19:49] -rwx------. 1 boinc boinc     36322 Dec 15 00:15 runpilot2-wrapper.sh
[2025-12-15 12:19:49] -rw-r--r--. 1 boinc boinc       100 Dec 15 08:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 12:19:49] -rwxr-xr-x. 1 boinc boinc      7986 Dec 15 08:47 run_atlas
[2025-12-15 12:19:49] -rw-r--r--. 1 boinc boinc       105 Dec 15 08:47 job.xml
[2025-12-15 12:19:49] -rw-r--r--. 1 boinc boinc      6392 Dec 15 08:47 init_data.xml
[2025-12-15 12:19:49] -rw-r--r--. 2 boinc boinc 224325753 Dec 15 08:47 EVNT.47898824._000042.pool.root.1
[2025-12-15 12:19:49] -rw-r--r--. 2 boinc boinc     15847 Dec 15 08:47 start_atlas.sh
[2025-12-15 12:19:49] drwxrwx--x. 2 boinc boinc        68 Dec 15 08:47 shared
[2025-12-15 12:19:49] -rw-r--r--. 2 boinc boinc    592383 Dec 15 08:47 input.tar.gz
[2025-12-15 12:19:49] -rw-r--r--. 1 boinc boinc         0 Dec 15 08:47 boinc_lockfile
[2025-12-15 12:19:49] -rw-r--r--. 1 boinc boinc      2511 Dec 15 08:48 pandaJob.out
[2025-12-15 12:19:49] -rw-------. 1 boinc boinc    991016 Dec 15 08:51 agis_schedconf.cvmfs.json
[2025-12-15 12:19:49] drwx------. 5 boinc boinc      4096 Dec 15 08:51 pilot3
[2025-12-15 12:19:49] -rw-------. 1 boinc boinc 224116060 Dec 15 12:05 HITS.47898826._000838.pool.root.1
[2025-12-15 12:19:49] -rw-r--r--. 1 boinc boinc       531 Dec 15 12:06 boinc_task_state.xml
[2025-12-15 12:19:49] -rw-------. 1 boinc boinc      1016 Dec 15 12:06 memory_monitor_summary.json
[2025-12-15 12:19:49] -rw-------. 1 boinc boinc         0 Dec 15 12:08 agis_ddmendpoints.agis.ALL.json
[2025-12-15 12:19:49] -rw-------. 1 boinc boinc    417165 Dec 15 12:09 log.47898826._000838.job.log.tgz.1
[2025-12-15 12:19:49] -rw-------. 1 boinc boinc        95 Dec 15 12:18 pilot_heartbeat.json
[2025-12-15 12:19:49] -rw-r--r--. 1 boinc boinc      8192 Dec 15 12:19 boinc_mmap_file
[2025-12-15 12:19:49] -rw-r--r--. 1 boinc boinc        28 Dec 15 12:19 wrapper_checkpoint.txt
[2025-12-15 12:19:49] -rw-------. 1 boinc boinc      7778 Dec 15 12:19 heartbeat.json
[2025-12-15 12:19:49] -rw-------. 1 boinc boinc      4802 Dec 15 12:19 pilotlog.txt
[2025-12-15 12:19:49] -rw-------. 1 boinc boinc   1619081 Dec 15 12:19 log.47898826._000838.job.log.1
[2025-12-15 12:19:49] -rw-------. 1 boinc boinc       357 Dec 15 12:19 output.list
[2025-12-15 12:19:49] -rw-r--r--. 1 boinc boinc       620 Dec 15 12:19 runtime_log
[2025-12-15 12:19:49] -rw-------. 1 boinc boinc   2058240 Dec 15 12:19 result.tar.gz
[2025-12-15 12:19:49] -rw-r--r--. 1 boinc boinc      8833 Dec 15 12:19 runtime_log.err
[2025-12-15 12:19:49] -rw-------. 1 boinc boinc       656 Dec 15 12:19 KsULDmIUAp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfaWKDm1twPWn.diag
[2025-12-15 12:19:49] -rw-r--r--. 1 boinc boinc     20712 Dec 15 12:19 stderr.txt
[2025-12-15 12:19:49] HITS file was successfully produced:
[2025-12-15 12:19:49] -rw-------. 1 boinc boinc 224116060 Dec 15 12:05 shared/HITS.pool.root.1
[2025-12-15 12:19:49]  *** Contents of shared directory: ***
[2025-12-15 12:19:49] total 440544
[2025-12-15 12:19:49] -rw-r--r--. 2 boinc boinc 224325753 Dec 15 08:47 ATLAS.root_0
[2025-12-15 12:19:49] -rw-r--r--. 2 boinc boinc     15847 Dec 15 08:47 start_atlas.sh
[2025-12-15 12:19:49] -rw-r--r--. 2 boinc boinc    592383 Dec 15 08:47 input.tar.gz
[2025-12-15 12:19:49] -rw-------. 1 boinc boinc 224116060 Dec 15 12:05 HITS.pool.root.1
[2025-12-15 12:19:49] -rw-------. 1 boinc boinc   2058240 Dec 15 12:19 result.tar.gz
12:19:51 (17712): run_atlas exited; CPU time 60296.408683
12:19:51 (17712): called boinc_finish(0)

</stderr_txt>
]]>

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