Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:12:36 (6641): wrapper (7.7.26015): starting
22:12:36 (6641): wrapper: running run_atlas (--nthreads 12)
[2025-12-14 22:12:36] Arguments: --nthreads 12
[2025-12-14 22:12:36] Threads: 12
[2025-12-14 22:12:36] Checking for CVMFS
[2025-12-14 22:12:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 22:12:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 22:12:37] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 22:12:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 22:12:37] 2.11.2.0 22587 29028 90456 154016 1 56 12730996 20275200 1 130560 0 10273364 99.899 1866237 41252 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 22:12:37] CVMFS is ok
[2025-12-14 22:12:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 22:12:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 22:12:37] Further information can be found at the LHC@home message board.
[2025-12-14 22:12:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 22:12:37] Checking for apptainer binary...
[2025-12-14 22:12:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 22:12:37] Running /usr/bin/apptainer --version
[2025-12-14 22:12:37] apptainer version 1.3.2-1.el7
[2025-12-14 22:12:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 22:12:38] c-205-13.aglt2.org
[2025-12-14 22:12:38] apptainer works
[2025-12-14 22:12:39] Set ATHENA_PROC_NUMBER=12
[2025-12-14 22:12:39] Set ATHENA_CORE_NUMBER=12
[2025-12-14 22:12:39] Starting ATLAS job with PandaID=6929508284
[2025-12-14 22:12:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 23:38:09]  *** The last 200 lines of the pilot log: ***
[2025-12-14 23:38:09]  replicas=None
[2025-12-14 23:38:09]  scope=mc23_13p6TeV
[2025-12-14 23:38:09]  status=None
[2025-12-14 23:38:09]  status_code=0
[2025-12-14 23:38:09]  storage_token=
[2025-12-14 23:38:09]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6929508284/log.47886933._004563.job.log.tgz.1
[2025-12-14 23:38:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/2e/log.47886933._004563.job.log.tgz.1
[2025-12-14 23:38:09]  workdir=None
[2025-12-14 23:38:09] ]
[2025-12-14 23:38:09] 2025-12-15 04:37:07,808 | INFO     | transferring file log.47886933._004563.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6929508284/log.47886933._004563.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-14 23:38:09] 2025-12-15 04:37:07,808 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6929508284/log.47886933._004563.job.log.tgz.1 /tmp/boinchome/slots/0/log.47886933._004563.job
[2025-12-14 23:38:09] 2025-12-15 04:37:07,830 | INFO     | adding to output.list: log.47886933._004563.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/2e/log.47886933._004563.job.log.tg
[2025-12-14 23:38:09] 2025-12-15 04:37:07,831 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-14 23:38:09] 2025-12-15 04:37:07,831 | INFO     | summary of transferred files:
[2025-12-14 23:38:09] 2025-12-15 04:37:07,832 | INFO     |  -- lfn=log.47886933._004563.job.log.tgz.1, status_code=0, status=transferred
[2025-12-14 23:38:09] 2025-12-15 04:37:07,832 | INFO     | stage-out finished correctly
[2025-12-14 23:38:09] 2025-12-15 04:37:08,633 | INFO     | monitor loop #376: job 0:6929508284 is in state 'finished'
[2025-12-14 23:38:09] 2025-12-15 04:37:08,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 23:38:09] 2025-12-15 04:37:09,589 | INFO     | time since job start (5054s) is within the limit (174528.0s)
[2025-12-14 23:38:09] 2025-12-15 04:37:11,042 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-14 23:38:09] 2025-12-15 04:37:11,136 | INFO     | monitor loop #377: job 0:6929508284 is in state 'finished'
[2025-12-14 23:38:09] 2025-12-15 04:37:11,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 23:38:09] 2025-12-15 04:37:11,595 | INFO     | time since job start (5056s) is within the limit (174528.0s)
[2025-12-14 23:38:09] 2025-12-15 04:37:13,591 | INFO     | job 6929508284 has state=finished
[2025-12-14 23:38:09] 2025-12-15 04:37:13,591 | INFO     | preparing for final server update for job 6929508284 in state='finished'
[2025-12-14 23:38:09] 2025-12-15 04:37:13,592 | INFO     | this job has now completed (state=finished)
[2025-12-14 23:38:09] 2025-12-15 04:37:13,592 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-14 23:38:09] 2025-12-15 04:37:13,592 | INFO     | log transfer has been attempted: DONE
[2025-12-14 23:38:09] 2025-12-15 04:37:13,592 | INFO     | job 6929508284 has finished - writing final server update
[2025-12-14 23:38:09] 2025-12-15 04:37:13,592 | INFO     | total number of processed events: 400 (read)
[2025-12-14 23:38:09] 2025-12-15 04:37:13,594 | INFO     | executing command: lscpu
[2025-12-14 23:38:09] 2025-12-15 04:37:13,598 | INFO     | time since job start (5058s) is within the limit (174528.0s)
[2025-12-14 23:38:09] 2025-12-15 04:37:13,620 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-14 23:38:09] 2025-12-15 04:37:13,639 | INFO     | monitor loop #378: job 0:6929508284 is in state 'finished'
[2025-12-14 23:38:09] 2025-12-15 04:37:13,639 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 23:38:09] 2025-12-15 04:37:15,603 | INFO     | time since job start (5060s) is within the limit (174528.0s)
[2025-12-14 23:38:09] 2025-12-15 04:37:16,142 | INFO     | monitor loop #379: job 0:6929508284 is in state 'finished'
[2025-12-14 23:38:09] 2025-12-15 04:37:16,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 23:38:09] 2025-12-15 04:37:17,608 | INFO     | time since job start (5062s) is within the limit (174528.0s)
[2025-12-14 23:38:09] 2025-12-15 04:37:18,038 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-14 23:38:09] 2025-12-15 04:37:18,042 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1795.5833333333333
[2025-12-14 23:38:09] 2025-12-15 04:37:18,045 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929508284/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 23:38:09] 2025-12-15 04:37:18,046 | INFO     | extracted standard info from prmon json
[2025-12-14 23:38:09] 2025-12-15 04:37:18,046 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 23:38:09] 2025-12-15 04:37:18,046 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 23:38:09] 2025-12-15 04:37:18,047 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 23:38:09] 2025-12-15 04:37:18,047 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 23:38:09] 2025-12-15 04:37:18,049 | INFO     | fitting pss+swap vs Time
[2025-12-14 23:38:09] 2025-12-15 04:37:18,049 | INFO     | sum of square deviations: 136098442.98684177
[2025-12-14 23:38:09] 2025-12-15 04:37:18,050 | INFO     | sum of deviations: -28747786.47368425
[2025-12-14 23:38:09] 2025-12-15 04:37:18,050 | INFO     | mean x: 1765770996.5131578
[2025-12-14 23:38:09] 2025-12-15 04:37:18,050 | INFO     | mean y: 2688159.4736842103
[2025-12-14 23:38:09] 2025-12-15 04:37:18,050 | INFO     | intersect: 375668235.1832401
[2025-12-14 23:38:09] 2025-12-15 04:37:18,050 | INFO     | chi2: 0.005490441951440901
[2025-12-14 23:38:09] 2025-12-15 04:37:18,050 | INFO     | current memory leak: -0.21 B/s (using 76 data points, chi2=0.01)
[2025-12-14 23:38:09] 2025-12-15 04:37:18,051 | INFO     | could have reported an average CPU frequency of 2060 MHz (6 samples)
[2025-12-14 23:38:09] 2025-12-15 04:37:18,051 | INFO     | ..............................
[2025-12-14 23:38:09] 2025-12-15 04:37:18,051 | INFO     | . Timing measurements:
[2025-12-14 23:38:09] 2025-12-15 04:37:18,051 | INFO     | . get job = 0 s
[2025-12-14 23:38:09] 2025-12-15 04:37:18,051 | INFO     | . initial setup = 2 s
[2025-12-14 23:38:09] 2025-12-15 04:37:18,051 | INFO     | . payload setup = 7 s
[2025-12-14 23:38:09] 2025-12-15 04:37:18,051 | INFO     | . stage-in = 0 s
[2025-12-14 23:38:09] 2025-12-15 04:37:18,052 | INFO     | . payload execution = 5024 s
[2025-12-14 23:38:09] 2025-12-15 04:37:18,052 | INFO     | . stage-out = 0 s
[2025-12-14 23:38:09] 2025-12-15 04:37:18,052 | INFO     | . log creation = 0 s
[2025-12-14 23:38:09] 2025-12-15 04:37:18,052 | INFO     | ..............................
[2025-12-14 23:38:09] 2025-12-15 04:37:18,607 | INFO     | 
[2025-12-14 23:38:09] 2025-12-15 04:37:18,607 | INFO     | job summary report
[2025-12-14 23:38:09] 2025-12-15 04:37:18,611 | INFO     | --------------------------------------------------
[2025-12-14 23:38:09] 2025-12-15 04:37:18,611 | INFO     | PanDA job id: 6929508284
[2025-12-14 23:38:09] 2025-12-15 04:37:18,611 | INFO     | task id: 47886933
[2025-12-14 23:38:09] 2025-12-15 04:37:18,611 | INFO     | errors: (none)
[2025-12-14 23:38:09] 2025-12-15 04:37:18,612 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 23:38:09] 2025-12-15 04:37:18,612 | INFO     | pilot state: finished 
[2025-12-14 23:38:09] 2025-12-15 04:37:18,612 | INFO     | transexitcode: 0
[2025-12-14 23:38:09] 2025-12-15 04:37:18,612 | INFO     | exeerrorcode: 0
[2025-12-14 23:38:09] 2025-12-15 04:37:18,612 | INFO     | exeerrordiag: 
[2025-12-14 23:38:09] 2025-12-15 04:37:18,612 | INFO     | exitcode: 0
[2025-12-14 23:38:09] 2025-12-15 04:37:18,612 | INFO     | exitmsg: OK
[2025-12-14 23:38:09] 2025-12-15 04:37:18,613 | INFO     | cpuconsumptiontime: 50143 s
[2025-12-14 23:38:09] 2025-12-15 04:37:18,613 | INFO     | nevents: 400
[2025-12-14 23:38:09] 2025-12-15 04:37:18,613 | INFO     | neventsw: 0
[2025-12-14 23:38:09] 2025-12-15 04:37:18,613 | INFO     | pid: 17091
[2025-12-14 23:38:09] 2025-12-15 04:37:18,613 | INFO     | pgrp: 17091
[2025-12-14 23:38:09] 2025-12-15 04:37:18,613 | INFO     | corecount: 12
[2025-12-14 23:38:09] 2025-12-15 04:37:18,613 | INFO     | event service: False
[2025-12-14 23:38:09] 2025-12-15 04:37:18,614 | INFO     | sizes: {0: 2283965, 5: 2284227, 11: 2284283, 5034: 2310547, 5035: 2310546, 5036: 2319600, 5039: 2319784, 5046: 2319978}
[2025-12-14 23:38:09] 2025-12-15 04:37:18,614 | INFO     | --------------------------------------------------
[2025-12-14 23:38:09] 2025-12-15 04:37:18,614 | INFO     | 
[2025-12-14 23:38:09] 2025-12-15 04:37:18,614 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-14 23:38:09] 2025-12-15 04:37:18,638 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 23:38:09] 2025-12-15 04:37:18,638 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 23:38:09] 2025-12-15 04:37:18,638 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 23:38:09] 2025-12-15 04:37:18,638 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 23:38:09] 2025-12-15 04:37:18,639 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 23:38:09] 2025-12-15 04:37:18,639 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 23:38:09] 2025-12-15 04:37:18,639 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 23:38:09] 2025-12-15 04:37:18,639 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 23:38:09] 2025-12-15 04:37:18,639 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 23:38:09] 2025-12-15 04:37:18,639 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 23:38:09] 2025-12-15 04:37:18,640 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 23:38:09] 2025-12-15 04:37:18,640 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 23:38:09] 2025-12-15 04:37:18,640 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 23:38:09] 2025-12-15 04:37:18,640 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 23:38:09] 2025-12-15 04:37:18,640 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 23:38:09] 2025-12-15 04:37:18,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 23:38:09] 2025-12-15 04:37:18,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 23:38:09] 2025-12-15 04:37:18,641 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 23:38:09] 2025-12-15 04:37:18,641 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 23:38:09] 2025-12-15 04:37:18,641 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 23:38:09] 2025-12-15 04:37:18,641 | INFO     | job 6929508284 has completed (purged errors)
[2025-12-14 23:38:09] 2025-12-15 04:37:18,641 | INFO     | overall cleanup function is called
[2025-12-14 23:38:09] 2025-12-15 04:37:19,650 | INFO     | --- collectZombieJob: --- 10, [17091]
[2025-12-14 23:38:09] 2025-12-15 04:37:19,650 | INFO     | zombie collector waiting for pid 17091
[2025-12-14 23:38:09] 2025-12-15 04:37:19,650 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 23:38:09] 2025-12-15 04:37:19,650 | INFO     | collected zombie processes
[2025-12-14 23:38:09] 2025-12-15 04:37:19,650 | INFO     | will attempt to kill all subprocesses of pid=17091
[2025-12-14 23:38:09] 2025-12-15 04:37:19,746 | INFO     | process IDs to be killed: [17091] (in reverse order)
[2025-12-14 23:38:09] 2025-12-15 04:37:19,796 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 23:38:09] 2025-12-15 04:37:19,796 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 23:38:09] 2025-12-15 04:37:19,800 | INFO     | did not find any defunct processes belonging to 17091
[2025-12-14 23:38:09] 2025-12-15 04:37:19,803 | INFO     | did not find any defunct processes belonging to 17091
[2025-12-14 23:38:09] 2025-12-15 04:37:19,803 | INFO     | ready for new job
[2025-12-14 23:38:09] 2025-12-15 04:37:19,803 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 23:38:09] 2025-12-15 04:37:19,804 | INFO     | ***************************************
[2025-12-14 23:38:09] 2025-12-15 04:37:19,804 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 23:38:09] 2025-12-15 04:37:19,805 | INFO     | ***************************************
[2025-12-14 23:38:09] 2025-12-15 04:37:19,805 | INFO     | 
[2025-12-14 23:38:09] 2025-12-15 04:37:19,805 | INFO     | architecture information:
[2025-12-14 23:38:09] 2025-12-15 04:37:19,806 | INFO     | executing command: cat /etc/os-release
[2025-12-14 23:38:09] 2025-12-15 04:37:19,821 | INFO     | cat /etc/os-release:
[2025-12-14 23:38:09] NAME="CentOS Linux"
[2025-12-14 23:38:09] VERSION="7 (Core)"
[2025-12-14 23:38:09] ID="centos"
[2025-12-14 23:38:09] ID_LIKE="rhel fedora"
[2025-12-14 23:38:09] VERSION_ID="7"
[2025-12-14 23:38:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 23:38:09] ANSI_COLOR="0;31"
[2025-12-14 23:38:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 23:38:09] HOME_URL="https://www.centos.org/"
[2025-12-14 23:38:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 23:38:09] 
[2025-12-14 23:38:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 23:38:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 23:38:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 23:38:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 23:38:09] 
[2025-12-14 23:38:09] 2025-12-15 04:37:19,821 | INFO     | ***************************************
[2025-12-14 23:38:09] 2025-12-15 04:37:20,324 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-14 23:38:09] 2025-12-15 04:37:20,341 | INFO     | sufficient remaining disk space (29455548416 B)
[2025-12-14 23:38:09] 2025-12-15 04:37:20,341 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 23:38:09] 2025-12-15 04:37:20,341 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 23:38:09] 2025-12-15 04:37:20,341 | INFO     | update_server=False
[2025-12-14 23:38:09] 2025-12-15 04:37:20,342 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 23:38:09] 2025-12-15 04:37:20,342 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 23:38:09] 2025-12-15 04:37:20,342 | INFO     | aborting loop
[2025-12-14 23:38:09] 2025-12-15 04:37:20,716 | INFO     | all payload control threads have been joined
[2025-12-14 23:38:09] 2025-12-15 04:37:20,914 | INFO     | all data control threads have been joined
[2025-12-14 23:38:09] 2025-12-15 04:37:20,929 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 23:38:09] 2025-12-15 04:37:21,336 | INFO     | all job control threads have been joined
[2025-12-14 23:38:09] 2025-12-15 04:37:21,347 | INFO     | [job] retrieve thread has finished
[2025-12-14 23:38:09] 2025-12-15 04:37:21,348 | INFO     | [job] job monitor thread has finished
[2025-12-14 23:38:09] 2025-12-15 04:37:21,348 | INFO     | [data] copytool_in thread has finished
[2025-12-14 23:38:09] 2025-12-15 04:37:21,363 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 23:38:09] 2025-12-15 04:37:21,487 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 23:38:09] 2025-12-15 04:37:21,634 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 23:38:09] 2025-12-15 04:37:21,721 | INFO     | [payload] control thread has finished
[2025-12-14 23:38:09] 2025-12-15 04:37:21,911 | INFO     | [payload] validate_post thread has finished
[2025-12-14 23:38:09] 2025-12-15 04:37:21,919 | INFO     | [data] control thread has finished
[2025-12-14 23:38:09] 2025-12-15 04:37:22,050 | INFO     | [job] validate thread has finished
[2025-12-14 23:38:09] 2025-12-15 04:37:22,187 | INFO     | [payload] failed_post thread has finished
[2025-12-14 23:38:09] 2025-12-15 04:37:22,341 | INFO     | [job] control thread has finished
[2025-12-14 23:38:09] 2025-12-15 04:37:22,430 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 23:38:09] 2025-12-15 04:37:22,820 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 23:38:09] 2025-12-15 04:37:22,934 | INFO     | [data] copytool_out thread has finished
[2025-12-14 23:38:09] 2025-12-15 04:37:23,142 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 23:38:09] 2025-12-15 04:37:24,147 | INFO     | [job] queue monitor thread has finished
[2025-12-14 23:38:09] 2025-12-15 04:37:25,639 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 23:38:09] 2025-12-15 04:37:50,802 | INFO     | PID=10674 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 23:38:09] 2025-12-15 04:37:50,802 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 23:38:09] 2025-12-15 04:37:50,803 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 23:38:09] 2025-12-15 04:37:50,803 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 23:38:09] 2025-12-15 04:38:03,043 | INFO     | [monitor] cgroup control has ended
[2025-12-14 23:38:09] 2025-12-15 04:38:04,687 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140418176214848)>', '<ExcThread(monitor, started 140417865586432)>']
[2025-12-14 23:38:09] 2025-12-15 04:38:04,870 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 23:38:09] 2025-12-15 04:38:04,870 | INFO     | [monitor] control thread has ended
[2025-12-14 23:38:09] 2025-12-15 04:38:09,691 | INFO     | all workflow threads have been joined
[2025-12-14 23:38:09] 2025-12-15 04:38:09,691 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 23:38:09] 2025-12-15 04:38:09,691 | INFO     | traces error code: 0
[2025-12-14 23:38:09] 2025-12-15 04:38:09,692 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 23:38:09] 2025-12-15 04:38:09,777 [wrapper] ==== pilot stdout END ====
[2025-12-14 23:38:09] 2025-12-15 04:38:09,781 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 23:38:09] 2025-12-15 04:38:09,785 [wrapper] pilotpid: 10674
[2025-12-14 23:38:09] 2025-12-15 04:38:09,788 [wrapper] Pilot exit status: 0
[2025-12-14 23:38:09] 2025-12-15 04:38:09,801 [wrapper] pandaids: 6929508284
[2025-12-14 23:38:09] 2025-12-15 04:38:09,843 [wrapper] cleanup supervisor_pilot 20004 10675
[2025-12-14 23:38:09] 2025-12-15 04:38:09,847 [wrapper] Test setup, not cleaning
[2025-12-14 23:38:09] 2025-12-15 04:38:09,851 [wrapper] apfmon messages muted
[2025-12-14 23:38:09] 2025-12-15 04:38:09,854 [wrapper] ==== wrapper stdout END ====
[2025-12-14 23:38:09] 2025-12-15 04:38:09,857 [wrapper] ==== wrapper stderr END ====
[2025-12-14 23:38:09]  *** Error codes and diagnostics ***
[2025-12-14 23:38:09]     "exeErrorCode": 0,
[2025-12-14 23:38:09]     "exeErrorDiag": "",
[2025-12-14 23:38:09]     "pilotErrorCode": 0,
[2025-12-14 23:38:09]     "pilotErrorDiag": "",
[2025-12-14 23:38:09]  *** Listing of results directory ***
[2025-12-14 23:38:09] total 338232
[2025-12-14 23:38:09] -rw-r--r-- 1 boincer umatlas      5112 Dec 14 18:13 queuedata.json
[2025-12-14 23:38:09] -rw-r--r-- 1 boincer umatlas    579449 Dec 14 18:13 pilot3.tar.gz
[2025-12-14 23:38:09] -rwx------ 1 boincer umatlas     36322 Dec 14 18:15 runpilot2-wrapper.sh
[2025-12-14 23:38:09] -rw-r--r-- 1 boincer umatlas       100 Dec 14 22:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 23:38:09] -rwxr-xr-x 1 boincer umatlas      7986 Dec 14 22:12 run_atlas
[2025-12-14 23:38:09] -rw-r--r-- 1 boincer umatlas       105 Dec 14 22:12 job.xml
[2025-12-14 23:38:09] -rw-r--r-- 2 boincer umatlas 190999169 Dec 14 22:12 EVNT.47886929._000218.pool.root.1
[2025-12-14 23:38:09] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 22:12 start_atlas.sh
[2025-12-14 23:38:09] drwxrwx--x 2 boincer umatlas      4096 Dec 14 22:12 shared
[2025-12-14 23:38:09] -rw-r--r-- 2 boincer umatlas    592402 Dec 14 22:12 input.tar.gz
[2025-12-14 23:38:09] -rw-r--r-- 1 boincer umatlas         0 Dec 14 22:12 boinc_lockfile
[2025-12-14 23:38:09] -rw-r--r-- 1 boincer umatlas      2513 Dec 14 22:12 pandaJob.out
[2025-12-14 23:38:09] -rw------- 1 boincer umatlas        57 Dec 14 22:12 setup.sh.local
[2025-12-14 23:38:09] -rw------- 1 boincer umatlas    991016 Dec 14 22:12 agis_schedconf.cvmfs.json
[2025-12-14 23:38:09] -rw------- 1 boincer umatlas   1516240 Dec 14 22:12 agis_ddmendpoints.agis.ALL.json
[2025-12-14 23:38:09] drwx------ 5 boincer umatlas      4096 Dec 14 22:12 pilot3
[2025-12-14 23:38:09] -rw-r--r-- 1 boincer umatlas      5951 Dec 14 23:28 init_data.xml
[2025-12-14 23:38:09] -rw------- 1 boincer umatlas 149195678 Dec 14 23:36 HITS.47886933._004563.pool.root.1
[2025-12-14 23:38:09] -rw-r--r-- 1 boincer umatlas       529 Dec 14 23:36 boinc_task_state.xml
[2025-12-14 23:38:09] -rw------- 1 boincer umatlas      1049 Dec 14 23:37 memory_monitor_summary.json
[2025-12-14 23:38:09] -rw------- 1 boincer umatlas    394072 Dec 14 23:37 log.47886933._004563.job.log.tgz.1
[2025-12-14 23:38:09] -rw------- 1 boincer umatlas        95 Dec 14 23:37 pilot_heartbeat.json
[2025-12-14 23:38:09] -rw------- 1 boincer umatlas      7842 Dec 14 23:37 heartbeat.json
[2025-12-14 23:38:09] -rw-r--r-- 1 boincer umatlas      8192 Dec 14 23:37 boinc_mmap_file
[2025-12-14 23:38:09] -rw-r--r-- 1 boincer umatlas        27 Dec 14 23:37 wrapper_checkpoint.txt
[2025-12-14 23:38:09] -rw------- 1 boincer umatlas      4746 Dec 14 23:38 pilotlog.txt
[2025-12-14 23:38:09] -rw------- 1 boincer umatlas    726409 Dec 14 23:38 log.47886933._004563.job.log.1
[2025-12-14 23:38:09] -rw------- 1 boincer umatlas       357 Dec 14 23:38 output.list
[2025-12-14 23:38:09] -rw-r--r-- 1 boincer umatlas       620 Dec 14 23:38 runtime_log
[2025-12-14 23:38:09] -rw------- 1 boincer umatlas   1136640 Dec 14 23:38 result.tar.gz
[2025-12-14 23:38:09] -rw-r--r-- 1 boincer umatlas      9344 Dec 14 23:38 runtime_log.err
[2025-12-14 23:38:09] -rw------- 1 boincer umatlas       658 Dec 14 23:38 HKJNDm7TAp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlYWKDm1co2sn.diag
[2025-12-14 23:38:09] -rw-r--r-- 1 boincer umatlas     21945 Dec 14 23:38 stderr.txt
[2025-12-14 23:38:09] HITS file was successfully produced:
[2025-12-14 23:38:09] -rw------- 1 boincer umatlas 149195678 Dec 14 23:36 shared/HITS.pool.root.1
[2025-12-14 23:38:09]  *** Contents of shared directory: ***
[2025-12-14 23:38:09] total 333936
[2025-12-14 23:38:09] -rw-r--r-- 2 boincer umatlas 190999169 Dec 14 22:12 ATLAS.root_0
[2025-12-14 23:38:09] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 22:12 start_atlas.sh
[2025-12-14 23:38:09] -rw-r--r-- 2 boincer umatlas    592402 Dec 14 22:12 input.tar.gz
[2025-12-14 23:38:09] -rw------- 1 boincer umatlas 149195678 Dec 14 23:36 HITS.pool.root.1
[2025-12-14 23:38:09] -rw------- 1 boincer umatlas   1136640 Dec 14 23:38 result.tar.gz
23:38:11 (6641): run_atlas exited; CPU time 50117.176537
23:38:11 (6641): called boinc_finish(0)

</stderr_txt>
]]>

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