Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:40:44 (3061129): wrapper (7.7.26015): starting
21:40:44 (3061129): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 21:40:44] Arguments: --nthreads 8
[2025-12-14 21:40:44] Threads: 8
[2025-12-14 21:40:44] Checking for CVMFS
[2025-12-14 21:40:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 21:40:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 21:40:44] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 21:40:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 21:40:45] 2.13.3.0 7314 56761 212256 154015 3 750 23600751 40960000 33172 16776704 0 865782163 99.726 595487769 47282 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-14 21:40:45] CVMFS is ok
[2025-12-14 21:40:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 21:40:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 21:40:45] Further information can be found at the LHC@home message board.
[2025-12-14 21:40:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 21:40:45] Checking for apptainer binary...
[2025-12-14 21:40:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 21:40:45] Running /usr/bin/apptainer --version
[2025-12-14 21:40:45] apptainer version 1.4.5-2.el9
[2025-12-14 21:40:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 21:40:46] c8-16-1.aglt2.org
[2025-12-14 21:40:46] apptainer works
[2025-12-14 21:40:46] Set ATHENA_PROC_NUMBER=8
[2025-12-14 21:40:46] Set ATHENA_CORE_NUMBER=8
[2025-12-14 21:40:46] Starting ATLAS job with PandaID=6929437130
[2025-12-14 21:40:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 01:30:12]  *** The last 200 lines of the pilot log: ***
[2025-12-15 01:30:12] 2025-12-15 06:29:29,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 01:30:12] 2025-12-15 06:29:30,483 | INFO     | time since job start (13681s) is within the limit (174528.0s)
[2025-12-15 01:30:12] 2025-12-15 06:29:32,357 | INFO     | monitor loop #853: job 0:6929437130 is in state 'finished'
[2025-12-15 01:30:12] 2025-12-15 06:29:32,358 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 01:30:12] 2025-12-15 06:29:32,490 | INFO     | time since job start (13683s) is within the limit (174528.0s)
[2025-12-15 01:30:12] 2025-12-15 06:29:34,497 | INFO     | time since job start (13685s) is within the limit (174528.0s)
[2025-12-15 01:30:12] 2025-12-15 06:29:34,913 | INFO     | monitor loop #854: job 0:6929437130 is in state 'finished'
[2025-12-15 01:30:12] 2025-12-15 06:29:34,913 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 01:30:12] 2025-12-15 06:29:36,512 | INFO     | time since job start (13687s) is within the limit (174528.0s)
[2025-12-15 01:30:12] 2025-12-15 06:29:37,002 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-15 01:30:12] 2025-12-15 06:29:37,011 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9902031250003
[2025-12-15 01:30:12] 2025-12-15 06:29:37,036 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6929437130/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 01:30:12] 2025-12-15 06:29:37,046 | INFO     | extracted standard info from prmon json
[2025-12-15 01:30:12] 2025-12-15 06:29:37,046 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 01:30:12] 2025-12-15 06:29:37,046 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 01:30:12] 2025-12-15 06:29:37,047 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 01:30:12] 2025-12-15 06:29:37,047 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 01:30:12] 2025-12-15 06:29:37,049 | INFO     | fitting pss+swap vs Time
[2025-12-15 01:30:12] 2025-12-15 06:29:37,049 | INFO     | sum of square deviations: 3392701537.6981955
[2025-12-15 01:30:12] 2025-12-15 06:29:37,050 | INFO     | sum of deviations: 62937944897.05853
[2025-12-15 01:30:12] 2025-12-15 06:29:37,050 | INFO     | mean x: 1765773348.59009
[2025-12-15 01:30:12] 2025-12-15 06:29:37,050 | INFO     | mean y: 2453000.572072072
[2025-12-15 01:30:12] 2025-12-15 06:29:37,050 | INFO     | intersect: -32754376469.802574
[2025-12-15 01:30:12] 2025-12-15 06:29:37,050 | INFO     | chi2: 4.063788142855647
[2025-12-15 01:30:12] 2025-12-15 06:29:37,050 | INFO     | sum of square deviations: 3168601110.1566854
[2025-12-15 01:30:12] 2025-12-15 06:29:37,051 | INFO     | sum of deviations: 75171811344.80644
[2025-12-15 01:30:12] 2025-12-15 06:29:37,051 | INFO     | mean x: 1765773196.092166
[2025-12-15 01:30:12] 2025-12-15 06:29:37,051 | INFO     | mean y: 2461152.709677419
[2025-12-15 01:30:12] 2025-12-15 06:29:37,051 | INFO     | intersect: -41888696793.578
[2025-12-15 01:30:12] 2025-12-15 06:29:37,052 | INFO     | chi2: 3.39661927555218
[2025-12-15 01:30:12] 2025-12-15 06:29:37,052 | INFO     | current chi2=3.39661927555218 (change=16.417412617249376 %)
[2025-12-15 01:30:12] 2025-12-15 06:29:37,052 | INFO     | right removable region: 216
[2025-12-15 01:30:12] 2025-12-15 06:29:37,052 | INFO     | sum of square deviations: 3168588910.1566854
[2025-12-15 01:30:12] 2025-12-15 06:29:37,053 | INFO     | sum of deviations: 471877087.23962975
[2025-12-15 01:30:12] 2025-12-15 06:29:37,053 | INFO     | mean x: 1765773501.092166
[2025-12-15 01:30:12] 2025-12-15 06:29:37,053 | INFO     | mean y: 2495343.7880184334
[2025-12-15 01:30:12] 2025-12-15 06:29:37,053 | INFO     | intersect: -260469679.4592199
[2025-12-15 01:30:12] 2025-12-15 06:29:37,053 | INFO     | chi2: 0.7868328851452008
[2025-12-15 01:30:12] 2025-12-15 06:29:37,053 | INFO     | current chi2=0.7868328851452008 (change=80.63794524996352 %)
[2025-12-15 01:30:12] 2025-12-15 06:29:37,053 | INFO     | sum of square deviations: 2954569495.113201
[2025-12-15 01:30:12] 2025-12-15 06:29:37,054 | INFO     | sum of deviations: -9513042156.669811
[2025-12-15 01:30:12] 2025-12-15 06:29:37,054 | INFO     | mean x: 1765773653.5943396
[2025-12-15 01:30:12] 2025-12-15 06:29:37,054 | INFO     | mean y: 2502429.6084905663
[2025-12-15 01:30:12] 2025-12-15 06:29:37,054 | INFO     | intersect: 5687892207.565376
[2025-12-15 01:30:12] 2025-12-15 06:29:37,054 | INFO     | chi2: 0.7059861412466356
[2025-12-15 01:30:12] 2025-12-15 06:29:37,054 | INFO     | current chi2=0.7059861412466356 (change=10.274957417882433 %)
[2025-12-15 01:30:12] 2025-12-15 06:29:37,054 | INFO     | left removable region: 20
[2025-12-15 01:30:12] 2025-12-15 06:29:37,054 | INFO     | sum of square deviations: 2334839506.9591703
[2025-12-15 01:30:12] 2025-12-15 06:29:37,055 | INFO     | sum of deviations: 4048432849.244899
[2025-12-15 01:30:12] 2025-12-15 06:29:37,055 | INFO     | mean x: 1765773775.6020408
[2025-12-15 01:30:12] 2025-12-15 06:29:37,055 | INFO     | mean y: 2511851.387755102
[2025-12-15 01:30:12] 2025-12-15 06:29:37,055 | INFO     | intersect: -3059204611.853288
[2025-12-15 01:30:12] 2025-12-15 06:29:37,055 | INFO     | chi2: 0.0018866120111086923
[2025-12-15 01:30:12] 2025-12-15 06:29:37,055 | INFO     | current memory leak: 1.73 B/s (using 196 data points, chi2=0.00)
[2025-12-15 01:30:12] 2025-12-15 06:29:37,056 | INFO     | could have reported an average CPU frequency of 3780 MHz (11 samples)
[2025-12-15 01:30:12] 2025-12-15 06:29:37,056 | INFO     | ..............................
[2025-12-15 01:30:12] 2025-12-15 06:29:37,056 | INFO     | . Timing measurements:
[2025-12-15 01:30:12] 2025-12-15 06:29:37,056 | INFO     | . get job = 0 s
[2025-12-15 01:30:12] 2025-12-15 06:29:37,056 | INFO     | . initial setup = 5 s
[2025-12-15 01:30:12] 2025-12-15 06:29:37,056 | INFO     | . payload setup = 33 s
[2025-12-15 01:30:12] 2025-12-15 06:29:37,056 | INFO     | . stage-in = 0 s
[2025-12-15 01:30:12] 2025-12-15 06:29:37,056 | INFO     | . payload execution = 13552 s
[2025-12-15 01:30:12] 2025-12-15 06:29:37,056 | INFO     | . stage-out = 3 s
[2025-12-15 01:30:12] 2025-12-15 06:29:37,056 | INFO     | . log creation = 0 s
[2025-12-15 01:30:12] 2025-12-15 06:29:37,056 | INFO     | ..............................
[2025-12-15 01:30:12] 2025-12-15 06:29:37,488 | INFO     | 
[2025-12-15 01:30:12] 2025-12-15 06:29:37,488 | INFO     | job summary report
[2025-12-15 01:30:12] 2025-12-15 06:29:37,488 | INFO     | --------------------------------------------------
[2025-12-15 01:30:12] 2025-12-15 06:29:37,488 | INFO     | PanDA job id: 6929437130
[2025-12-15 01:30:12] 2025-12-15 06:29:37,488 | INFO     | task id: 47898763
[2025-12-15 01:30:12] 2025-12-15 06:29:37,488 | INFO     | errors: (none)
[2025-12-15 01:30:12] 2025-12-15 06:29:37,488 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 01:30:12] 2025-12-15 06:29:37,488 | INFO     | pilot state: finished 
[2025-12-15 01:30:12] 2025-12-15 06:29:37,489 | INFO     | transexitcode: 0
[2025-12-15 01:30:12] 2025-12-15 06:29:37,489 | INFO     | exeerrorcode: 0
[2025-12-15 01:30:12] 2025-12-15 06:29:37,489 | INFO     | exeerrordiag: 
[2025-12-15 01:30:12] 2025-12-15 06:29:37,489 | INFO     | exitcode: 0
[2025-12-15 01:30:12] 2025-12-15 06:29:37,489 | INFO     | exitmsg: OK
[2025-12-15 01:30:12] 2025-12-15 06:29:37,489 | INFO     | cpuconsumptiontime: 33153 s
[2025-12-15 01:30:12] 2025-12-15 06:29:37,489 | INFO     | nevents: 400
[2025-12-15 01:30:12] 2025-12-15 06:29:37,489 | INFO     | neventsw: 0
[2025-12-15 01:30:12] 2025-12-15 06:29:37,489 | INFO     | pid: 3096755
[2025-12-15 01:30:12] 2025-12-15 06:29:37,489 | INFO     | pgrp: 3096755
[2025-12-15 01:30:12] 2025-12-15 06:29:37,489 | INFO     | corecount: 8
[2025-12-15 01:30:12] 2025-12-15 06:29:37,489 | INFO     | event service: False
[2025-12-15 01:30:12] 2025-12-15 06:29:37,489 | INFO     | sizes: {0: 2283781, 1: 2283980, 11: 2283980, 22: 2284008, 30: 2284298, 33: 2284326, 13589: 2314788, 13593: 2323842, 13627: 2323980}
[2025-12-15 01:30:12] 2025-12-15 06:29:37,489 | INFO     | --------------------------------------------------
[2025-12-15 01:30:12] 2025-12-15 06:29:37,489 | INFO     | 
[2025-12-15 01:30:12] 2025-12-15 06:29:37,489 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-12-15 01:30:12] 2025-12-15 06:29:37,608 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 01:30:12] 2025-12-15 06:29:37,609 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 01:30:12] 2025-12-15 06:29:37,609 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 01:30:12] 2025-12-15 06:29:37,609 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 01:30:12] 2025-12-15 06:29:37,609 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 01:30:12] 2025-12-15 06:29:37,609 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 01:30:12] 2025-12-15 06:29:37,609 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 01:30:12] 2025-12-15 06:29:37,609 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 01:30:12] 2025-12-15 06:29:37,609 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 01:30:12] 2025-12-15 06:29:37,609 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 01:30:12] 2025-12-15 06:29:37,609 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 01:30:12] 2025-12-15 06:29:37,609 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 01:30:12] 2025-12-15 06:29:37,609 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 01:30:12] 2025-12-15 06:29:37,609 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 01:30:12] 2025-12-15 06:29:37,609 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 01:30:12] 2025-12-15 06:29:37,609 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 01:30:12] 2025-12-15 06:29:37,609 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 01:30:12] 2025-12-15 06:29:37,609 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 01:30:12] 2025-12-15 06:29:37,609 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 01:30:12] 2025-12-15 06:29:37,609 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 01:30:12] 2025-12-15 06:29:37,609 | INFO     | job 6929437130 has completed (purged errors)
[2025-12-15 01:30:12] 2025-12-15 06:29:37,610 | INFO     | overall cleanup function is called
[2025-12-15 01:30:12] 2025-12-15 06:29:38,617 | INFO     | --- collectZombieJob: --- 10, [3096755]
[2025-12-15 01:30:12] 2025-12-15 06:29:38,617 | INFO     | zombie collector waiting for pid 3096755
[2025-12-15 01:30:12] 2025-12-15 06:29:38,617 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 01:30:12] 2025-12-15 06:29:38,617 | INFO     | collected zombie processes
[2025-12-15 01:30:12] 2025-12-15 06:29:38,617 | INFO     | will attempt to kill all subprocesses of pid=3096755
[2025-12-15 01:30:12] 2025-12-15 06:29:40,059 | INFO     | process IDs to be killed: [3096755] (in reverse order)
[2025-12-15 01:30:12] 2025-12-15 06:29:40,999 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 01:30:12] 2025-12-15 06:29:41,000 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 01:30:12] 2025-12-15 06:29:41,033 | INFO     | did not find any defunct processes belonging to 3096755
[2025-12-15 01:30:12] 2025-12-15 06:29:41,123 | INFO     | did not find any defunct processes belonging to 3096755
[2025-12-15 01:30:12] 2025-12-15 06:29:41,123 | INFO     | ready for new job
[2025-12-15 01:30:12] 2025-12-15 06:29:41,124 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 01:30:12] 2025-12-15 06:29:41,125 | INFO     | ***************************************
[2025-12-15 01:30:12] 2025-12-15 06:29:41,125 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 01:30:12] 2025-12-15 06:29:41,125 | INFO     | ***************************************
[2025-12-15 01:30:12] 2025-12-15 06:29:41,125 | INFO     | 
[2025-12-15 01:30:12] 2025-12-15 06:29:41,135 | INFO     | architecture information:
[2025-12-15 01:30:12] 2025-12-15 06:29:41,143 | INFO     | executing command: cat /etc/os-release
[2025-12-15 01:30:12] 2025-12-15 06:29:41,198 | INFO     | cat /etc/os-release:
[2025-12-15 01:30:12] NAME="CentOS Linux"
[2025-12-15 01:30:12] VERSION="7 (Core)"
[2025-12-15 01:30:12] ID="centos"
[2025-12-15 01:30:12] ID_LIKE="rhel fedora"
[2025-12-15 01:30:12] VERSION_ID="7"
[2025-12-15 01:30:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 01:30:12] ANSI_COLOR="0;31"
[2025-12-15 01:30:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 01:30:12] HOME_URL="https://www.centos.org/"
[2025-12-15 01:30:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 01:30:12] 
[2025-12-15 01:30:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 01:30:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 01:30:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 01:30:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 01:30:12] 
[2025-12-15 01:30:12] 2025-12-15 06:29:41,199 | INFO     | ***************************************
[2025-12-15 01:30:12] 2025-12-15 06:29:41,701 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-12-15 01:30:12] 2025-12-15 06:29:41,755 | INFO     | sufficient remaining disk space (167442907136 B)
[2025-12-15 01:30:12] 2025-12-15 06:29:41,756 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 01:30:12] 2025-12-15 06:29:41,756 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 01:30:12] 2025-12-15 06:29:41,756 | INFO     | update_server=False
[2025-12-15 01:30:12] 2025-12-15 06:29:41,756 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 01:30:12] 2025-12-15 06:29:41,756 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 01:30:12] 2025-12-15 06:29:41,756 | INFO     | aborting loop
[2025-12-15 01:30:12] 2025-12-15 06:29:41,773 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 01:30:12] 2025-12-15 06:29:42,243 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 01:30:12] 2025-12-15 06:29:42,391 | INFO     | all job control threads have been joined
[2025-12-15 01:30:12] 2025-12-15 06:29:42,582 | INFO     | all payload control threads have been joined
[2025-12-15 01:30:12] 2025-12-15 06:29:42,762 | INFO     | [job] retrieve thread has finished
[2025-12-15 01:30:12] 2025-12-15 06:29:42,762 | INFO     | [job] job monitor thread has finished
[2025-12-15 01:30:12] 2025-12-15 06:29:42,848 | INFO     | [payload] failed_post thread has finished
[2025-12-15 01:30:12] 2025-12-15 06:29:42,854 | INFO     | all data control threads have been joined
[2025-12-15 01:30:12] 2025-12-15 06:29:42,949 | INFO     | [data] copytool_in thread has finished
[2025-12-15 01:30:12] 2025-12-15 06:29:43,057 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 01:30:12] 2025-12-15 06:29:43,250 | INFO     | [job] queue monitor thread has finished
[2025-12-15 01:30:12] 2025-12-15 06:29:43,402 | INFO     | [job] control thread has finished
[2025-12-15 01:30:12] 2025-12-15 06:29:43,615 | INFO     | [payload] control thread has finished
[2025-12-15 01:30:12] 2025-12-15 06:29:43,692 | INFO     | [payload] validate_post thread has finished
[2025-12-15 01:30:12] 2025-12-15 06:29:43,788 | INFO     | [data] copytool_out thread has finished
[2025-12-15 01:30:12] 2025-12-15 06:29:43,884 | INFO     | [data] control thread has finished
[2025-12-15 01:30:12] 2025-12-15 06:29:44,017 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 01:30:12] 2025-12-15 06:29:44,108 | INFO     | [job] validate thread has finished
[2025-12-15 01:30:12] 2025-12-15 06:29:44,152 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 01:30:12] 2025-12-15 06:29:44,160 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 01:30:12] 2025-12-15 06:29:45,130 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 01:30:12] 2025-12-15 06:29:49,140 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 01:30:12] 2025-12-15 06:29:58,940 | INFO     | [monitor] cgroup control has ended
[2025-12-15 01:30:12] 2025-12-15 06:29:59,276 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140432397670208)>', '<ExcThread(monitor, started 140431891339008)>']
[2025-12-15 01:30:12] 2025-12-15 06:30:04,302 | INFO     | all workflow threads have been joined
[2025-12-15 01:30:12] 2025-12-15 06:30:04,302 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 01:30:12] 2025-12-15 06:30:04,302 | INFO     | traces error code: 0
[2025-12-15 01:30:12] 2025-12-15 06:30:04,303 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 01:30:12] 2025-12-15 06:30:10,890 | INFO     | PID=3071331 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-15 01:30:12] 2025-12-15 06:30:10,896 | INFO     | .. there are 37 such processes running
[2025-12-15 01:30:12] 2025-12-15 06:30:10,897 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 01:30:12] 2025-12-15 06:30:10,897 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 01:30:12] 2025-12-15 06:30:10,897 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 01:30:12] 2025-12-15 06:30:10,897 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 01:30:12] 2025-12-15 06:30:10,897 | INFO     | [monitor] control thread has ended
[2025-12-15 01:30:12] 2025-12-15 06:30:11,233 [wrapper] ==== pilot stdout END ====
[2025-12-15 01:30:12] 2025-12-15 06:30:11,371 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 01:30:12] 2025-12-15 06:30:11,392 [wrapper] pilotpid: 3071331
[2025-12-15 01:30:12] 2025-12-15 06:30:11,419 [wrapper] Pilot exit status: 0
[2025-12-15 01:30:12] 2025-12-15 06:30:11,518 [wrapper] pandaids: 6929437130
[2025-12-15 01:30:12] 2025-12-15 06:30:11,818 [wrapper] cleanup supervisor_pilot  661333 3071332
[2025-12-15 01:30:12] 2025-12-15 06:30:11,852 [wrapper] Test setup, not cleaning
[2025-12-15 01:30:12] 2025-12-15 06:30:11,886 [wrapper] apfmon messages muted
[2025-12-15 01:30:12] 2025-12-15 06:30:11,915 [wrapper] ==== wrapper stdout END ====
[2025-12-15 01:30:12] 2025-12-15 06:30:11,931 [wrapper] ==== wrapper stderr END ====
[2025-12-15 01:30:12]  *** Error codes and diagnostics ***
[2025-12-15 01:30:12]     "exeErrorCode": 0,
[2025-12-15 01:30:12]     "exeErrorDiag": "",
[2025-12-15 01:30:12]     "pilotErrorCode": 0,
[2025-12-15 01:30:12]     "pilotErrorDiag": "",
[2025-12-15 01:30:12]  *** Listing of results directory ***
[2025-12-15 01:30:12] total 443868
[2025-12-15 01:30:12] -rw-r--r--. 1 boincer umatlas      5112 Dec 14 02:47 queuedata.json
[2025-12-15 01:30:12] -rw-r--r--. 1 boincer umatlas    579449 Dec 14 02:47 pilot3.tar.gz
[2025-12-15 01:30:12] -rwx------. 1 boincer umatlas     36322 Dec 14 02:47 runpilot2-wrapper.sh
[2025-12-15 01:30:12] -rw-r--r--. 1 boincer umatlas       100 Dec 14 21:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 01:30:12] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 14 21:40 run_atlas
[2025-12-15 01:30:12] -rw-r--r--. 1 boincer umatlas       105 Dec 14 21:40 job.xml
[2025-12-15 01:30:12] -rw-r--r--. 2 boincer umatlas 224905915 Dec 14 21:40 EVNT.47898761._000356.pool.root.1
[2025-12-15 01:30:12] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 21:40 start_atlas.sh
[2025-12-15 01:30:12] drwxrwx--x. 2 boincer umatlas      4096 Dec 14 21:40 shared
[2025-12-15 01:30:12] -rw-r--r--. 2 boincer umatlas    592402 Dec 14 21:40 input.tar.gz
[2025-12-15 01:30:12] -rw-r--r--. 1 boincer umatlas         0 Dec 14 21:40 boinc_lockfile
[2025-12-15 01:30:12] -rw-r--r--. 1 boincer umatlas      2504 Dec 14 21:40 pandaJob.out
[2025-12-15 01:30:12] -rw-------. 1 boincer umatlas        57 Dec 14 21:40 setup.sh.local
[2025-12-15 01:30:12] -rw-------. 1 boincer umatlas    991016 Dec 14 21:41 agis_schedconf.cvmfs.json
[2025-12-15 01:30:12] drwx------. 5 boincer umatlas      4096 Dec 14 21:41 pilot3
[2025-12-15 01:30:12] -rw-r--r--. 1 boincer umatlas      7173 Dec 15 01:19 init_data.xml
[2025-12-15 01:30:12] -rw-------. 1 boincer umatlas 221315288 Dec 15 01:27 HITS.47898763._008893.pool.root.1
[2025-12-15 01:30:12] -rw-r--r--. 1 boincer umatlas       530 Dec 15 01:27 boinc_task_state.xml
[2025-12-15 01:30:12] -rw-------. 1 boincer umatlas      1062 Dec 15 01:28 memory_monitor_summary.json
[2025-12-15 01:30:12] -rw-------. 1 boincer umatlas   1516240 Dec 15 01:29 agis_ddmendpoints.agis.ALL.json
[2025-12-15 01:30:12] -rw-------. 1 boincer umatlas    450128 Dec 15 01:29 log.47898763._008893.job.log.tgz.1
[2025-12-15 01:30:12] -rw-------. 1 boincer umatlas      7819 Dec 15 01:29 heartbeat.json
[2025-12-15 01:30:12] -rw-r--r--. 1 boincer umatlas      8192 Dec 15 01:30 boinc_mmap_file
[2025-12-15 01:30:12] -rw-r--r--. 1 boincer umatlas        28 Dec 15 01:30 wrapper_checkpoint.txt
[2025-12-15 01:30:12] -rw-------. 1 boincer umatlas        95 Dec 15 01:30 pilot_heartbeat.json
[2025-12-15 01:30:12] -rw-------. 1 boincer umatlas       823 Dec 15 01:30 pilotlog.txt
[2025-12-15 01:30:12] -rw-------. 1 boincer umatlas   1743866 Dec 15 01:30 log.47898763._008893.job.log.1
[2025-12-15 01:30:12] -rw-------. 1 boincer umatlas       357 Dec 15 01:30 output.list
[2025-12-15 01:30:12] -rw-r--r--. 1 boincer umatlas       620 Dec 15 01:30 runtime_log
[2025-12-15 01:30:12] -rw-------. 1 boincer umatlas   2211840 Dec 15 01:30 result.tar.gz
[2025-12-15 01:30:12] -rw-r--r--. 1 boincer umatlas      9338 Dec 15 01:30 runtime_log.err
[2025-12-15 01:30:12] -rw-------. 1 boincer umatlas       659 Dec 15 01:30 FKjMDmD0vo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmB3UKDmvqBchn.diag
[2025-12-15 01:30:12] -rw-r--r--. 1 boincer umatlas     21422 Dec 15 01:30 stderr.txt
[2025-12-15 01:30:12] HITS file was successfully produced:
[2025-12-15 01:30:12] -rw-------. 1 boincer umatlas 221315288 Dec 15 01:27 shared/HITS.pool.root.1
[2025-12-15 01:30:12]  *** Contents of shared directory: ***
[2025-12-15 01:30:12] total 438532
[2025-12-15 01:30:12] -rw-r--r--. 2 boincer umatlas 224905915 Dec 14 21:40 ATLAS.root_0
[2025-12-15 01:30:12] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 21:40 start_atlas.sh
[2025-12-15 01:30:12] -rw-r--r--. 2 boincer umatlas    592402 Dec 14 21:40 input.tar.gz
[2025-12-15 01:30:12] -rw-------. 1 boincer umatlas 221315288 Dec 15 01:27 HITS.pool.root.1
[2025-12-15 01:30:12] -rw-------. 1 boincer umatlas   2211840 Dec 15 01:30 result.tar.gz
01:30:13 (3061129): run_atlas exited; CPU time 33606.152064
01:30:13 (3061129): called boinc_finish(0)

</stderr_txt>
]]>

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