Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:58:57 (31021): wrapper (7.7.26015): starting
20:58:57 (31021): wrapper: running run_atlas (--nthreads 12)
[2025-12-14 20:58:57] Arguments: --nthreads 12
[2025-12-14 20:58:57] Threads: 12
[2025-12-14 20:58:57] Checking for CVMFS
[2025-12-14 20:58:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 20:58:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 20:58:58] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 20:58:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 20:58:58] 2.11.2.0 22587 28954 89616 154014 2 59 12640061 20275200 1 130560 0 10195451 99.899 1863553 41236 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 20:58:58] CVMFS is ok
[2025-12-14 20:58:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 20:58:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 20:58:58] Further information can be found at the LHC@home message board.
[2025-12-14 20:58:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 20:58:58] Checking for apptainer binary...
[2025-12-14 20:58:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 20:58:58] Running /usr/bin/apptainer --version
[2025-12-14 20:58:58] apptainer version 1.3.2-1.el7
[2025-12-14 20:58:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 20:58:59] c-205-13.aglt2.org
[2025-12-14 20:58:59] apptainer works
[2025-12-14 20:58:59] Set ATHENA_PROC_NUMBER=12
[2025-12-14 20:58:59] Set ATHENA_CORE_NUMBER=12
[2025-12-14 20:58:59] Starting ATLAS job with PandaID=6930660090
[2025-12-14 20:58:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 22:07:27]  *** The last 200 lines of the pilot log: ***
[2025-12-14 22:07:27] 2025-12-15 03:06:27,196 | INFO     | transferring file log.47898878._001491.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6930660090/log.47898878._001491.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-14 22:07:27] 2025-12-15 03:06:27,196 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6930660090/log.47898878._001491.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898878._001491.job
[2025-12-14 22:07:27] 2025-12-15 03:06:27,220 | INFO     | adding to output.list: log.47898878._001491.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/16/dc/log.47898878._001491.job.log.tg
[2025-12-14 22:07:27] 2025-12-15 03:06:27,221 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-14 22:07:27] 2025-12-15 03:06:27,221 | INFO     | summary of transferred files:
[2025-12-14 22:07:27] 2025-12-15 03:06:27,221 | INFO     |  -- lfn=log.47898878._001491.job.log.tgz.1, status_code=0, status=transferred
[2025-12-14 22:07:27] 2025-12-15 03:06:27,221 | INFO     | stage-out finished correctly
[2025-12-14 22:07:27] 2025-12-15 03:06:28,131 | INFO     | time since job start (4034s) is within the limit (174528.0s)
[2025-12-14 22:07:27] 2025-12-15 03:06:28,416 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-14 22:07:27] 2025-12-15 03:06:28,491 | INFO     | job 6930660090 has state=finished
[2025-12-14 22:07:27] 2025-12-15 03:06:28,491 | INFO     | preparing for final server update for job 6930660090 in state='finished'
[2025-12-14 22:07:27] 2025-12-15 03:06:28,492 | INFO     | this job has now completed (state=finished)
[2025-12-14 22:07:27] 2025-12-15 03:06:28,492 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-14 22:07:27] 2025-12-15 03:06:28,492 | INFO     | log transfer has been attempted: DONE
[2025-12-14 22:07:27] 2025-12-15 03:06:28,492 | INFO     | job 6930660090 has finished - writing final server update
[2025-12-14 22:07:27] 2025-12-15 03:06:28,493 | INFO     | total number of processed events: 400 (read)
[2025-12-14 22:07:27] 2025-12-15 03:06:28,494 | INFO     | executing command: lscpu
[2025-12-14 22:07:27] 2025-12-15 03:06:28,520 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-14 22:07:27] 2025-12-15 03:06:30,136 | INFO     | time since job start (4036s) is within the limit (174528.0s)
[2025-12-14 22:07:27] 2025-12-15 03:06:31,101 | WARNING  | process 8816 can no longer be monitored (due to stat problems) - aborting
[2025-12-14 22:07:27] 2025-12-15 03:06:31,102 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6930660090/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 22:07:27] 2025-12-15 03:06:31,103 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6930660090/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 22:07:27] 2025-12-15 03:06:31,103 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-12-14 22:07:27] 2025-12-15 03:06:31,103 | WARNING  | maxPSS not found in memory monitor output
[2025-12-14 22:07:27] 2025-12-15 03:06:31,104 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4234858 B
[2025-12-14 22:07:27] 2025-12-15 03:06:31,104 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15590 B
[2025-12-14 22:07:27] 2025-12-15 03:06:31,104 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-14 22:07:27] 2025-12-15 03:06:31,250 | INFO     | PID=2438 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-14 22:07:27] 2025-12-15 03:06:32,250 | INFO     | time since job start (4038s) is within the limit (174528.0s)
[2025-12-14 22:07:27] 2025-12-15 03:06:33,243 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-14 22:07:27] 2025-12-15 03:06:33,251 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-12-14 22:07:27] 2025-12-15 03:06:33,253 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6930660090/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 22:07:27] 2025-12-15 03:06:33,254 | INFO     | extracted standard info from prmon json
[2025-12-14 22:07:27] 2025-12-15 03:06:33,254 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 22:07:27] 2025-12-15 03:06:33,254 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 22:07:27] 2025-12-15 03:06:33,255 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 22:07:27] 2025-12-15 03:06:33,255 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 22:07:27] 2025-12-15 03:06:33,257 | INFO     | fitting pss+swap vs Time
[2025-12-14 22:07:27] 2025-12-15 03:06:33,257 | INFO     | sum of square deviations: 63666310.0
[2025-12-14 22:07:27] 2025-12-15 03:06:33,257 | INFO     | sum of deviations: -2820945183.0
[2025-12-14 22:07:27] 2025-12-15 03:06:33,258 | INFO     | mean x: 1765766057.0
[2025-12-14 22:07:27] 2025-12-15 03:06:33,258 | INFO     | mean y: 2707604.186440678
[2025-12-14 22:07:27] 2025-12-15 03:06:33,258 | INFO     | intersect: 78240778144.1479
[2025-12-14 22:07:27] 2025-12-15 03:06:33,258 | INFO     | chi2: 0.0441067158288077
[2025-12-14 22:07:27] 2025-12-15 03:06:33,258 | INFO     | current memory leak: -44.31 B/s (using 59 data points, chi2=0.04)
[2025-12-14 22:07:27] 2025-12-15 03:06:33,259 | INFO     | could have reported an average CPU frequency of 2047 MHz (6 samples)
[2025-12-14 22:07:27] 2025-12-15 03:06:33,259 | INFO     | ..............................
[2025-12-14 22:07:27] 2025-12-15 03:06:33,259 | INFO     | . Timing measurements:
[2025-12-14 22:07:27] 2025-12-15 03:06:33,259 | INFO     | . get job = 0 s
[2025-12-14 22:07:27] 2025-12-15 03:06:33,259 | INFO     | . initial setup = 2 s
[2025-12-14 22:07:27] 2025-12-15 03:06:33,259 | INFO     | . payload setup = 7 s
[2025-12-14 22:07:27] 2025-12-15 03:06:33,259 | INFO     | . stage-in = 0 s
[2025-12-14 22:07:27] 2025-12-15 03:06:33,260 | INFO     | . payload execution = 4004 s
[2025-12-14 22:07:27] 2025-12-15 03:06:33,260 | INFO     | . stage-out = 0 s
[2025-12-14 22:07:27] 2025-12-15 03:06:33,260 | INFO     | . log creation = 0 s
[2025-12-14 22:07:27] 2025-12-15 03:06:33,260 | INFO     | ..............................
[2025-12-14 22:07:27] 2025-12-15 03:06:33,287 | INFO     | sufficient remaining disk space (29411508224 B)
[2025-12-14 22:07:27] 2025-12-15 03:06:33,303 | INFO     | work directory size check will use 2768240640 B as a max limit (20% grace limit added, divider=1)
[2025-12-14 22:07:27] 2025-12-15 03:06:33,342 | INFO     | 
[2025-12-14 22:07:27] 2025-12-15 03:06:33,342 | INFO     | job summary report
[2025-12-14 22:07:27] 2025-12-15 03:06:33,343 | INFO     | --------------------------------------------------
[2025-12-14 22:07:27] 2025-12-15 03:06:33,343 | INFO     | PanDA job id: 6930660090
[2025-12-14 22:07:27] 2025-12-15 03:06:33,343 | INFO     | task id: 47898878
[2025-12-14 22:07:27] 2025-12-15 03:06:33,343 | INFO     | errors: (none)
[2025-12-14 22:07:27] 2025-12-15 03:06:33,343 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 22:07:27] 2025-12-15 03:06:33,343 | INFO     | pilot state: finished 
[2025-12-14 22:07:27] 2025-12-15 03:06:33,343 | INFO     | transexitcode: 0
[2025-12-14 22:07:27] 2025-12-15 03:06:33,343 | INFO     | exeerrorcode: 0
[2025-12-14 22:07:27] 2025-12-15 03:06:33,344 | INFO     | exeerrordiag: 
[2025-12-14 22:07:27] 2025-12-15 03:06:33,344 | INFO     | exitcode: 0
[2025-12-14 22:07:27] 2025-12-15 03:06:33,344 | INFO     | exitmsg: OK
[2025-12-14 22:07:27] 2025-12-15 03:06:33,344 | INFO     | cpuconsumptiontime: 43862 s
[2025-12-14 22:07:27] 2025-12-15 03:06:33,344 | INFO     | nevents: 400
[2025-12-14 22:07:27] 2025-12-15 03:06:33,345 | INFO     | neventsw: 0
[2025-12-14 22:07:27] 2025-12-15 03:06:33,346 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6930660090: 4529559 B (within 2768240640 B limit)
[2025-12-14 22:07:27] 2025-12-15 03:06:33,346 | INFO     | pid: 8816
[2025-12-14 22:07:27] 2025-12-15 03:06:33,346 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6930660090/HITS.47898878._001491.pool.root.1 does not exist (skip from workdir size calculation)
[2025-12-14 22:07:27] 2025-12-15 03:06:33,346 | INFO     | pgrp: 8816
[2025-12-14 22:07:27] 2025-12-15 03:06:33,347 | INFO     | total size of present files: 0 B (workdir size: 4529559 B)
[2025-12-14 22:07:27] 2025-12-15 03:06:33,347 | INFO     | corecount: 12
[2025-12-14 22:07:27] 2025-12-15 03:06:33,347 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6930660090/HITS.47898878._001491.pool.root.1 since it does not exist
[2025-12-14 22:07:27] 2025-12-15 03:06:33,347 | INFO     | event service: False
[2025-12-14 22:07:27] 2025-12-15 03:06:33,348 | INFO     | sizes: {0: 2283892, 5: 2284154, 11: 2284210, 4014: 2310008, 4015: 2310007, 4016: 2319061, 4018: 2319245, 4022: 2319439}
[2025-12-14 22:07:27] 2025-12-15 03:06:33,348 | INFO     | --------------------------------------------------
[2025-12-14 22:07:27] 2025-12-15 03:06:33,348 | INFO     | 
[2025-12-14 22:07:27] 2025-12-15 03:06:33,349 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-14 22:07:27] 2025-12-15 03:06:33,372 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 22:07:27] 2025-12-15 03:06:33,372 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 22:07:27] 2025-12-15 03:06:33,372 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 22:07:27] 2025-12-15 03:06:33,373 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 22:07:27] 2025-12-15 03:06:33,373 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 22:07:27] 2025-12-15 03:06:33,373 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 22:07:27] 2025-12-15 03:06:33,374 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 22:07:27] 2025-12-15 03:06:33,374 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 22:07:27] 2025-12-15 03:06:33,374 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 22:07:27] 2025-12-15 03:06:33,374 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 22:07:27] 2025-12-15 03:06:33,374 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 22:07:27] 2025-12-15 03:06:33,375 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 22:07:27] 2025-12-15 03:06:33,375 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 22:07:27] 2025-12-15 03:06:33,375 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 22:07:27] 2025-12-15 03:06:33,375 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 22:07:27] 2025-12-15 03:06:33,376 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 22:07:27] 2025-12-15 03:06:33,376 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 22:07:27] 2025-12-15 03:06:33,376 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 22:07:27] 2025-12-15 03:06:33,376 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 22:07:27] 2025-12-15 03:06:33,376 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 22:07:27] 2025-12-15 03:06:33,377 | INFO     | job 6930660090 has completed (purged errors)
[2025-12-14 22:07:27] 2025-12-15 03:06:33,377 | INFO     | overall cleanup function is called
[2025-12-14 22:07:27] 2025-12-15 03:06:33,451 | INFO     | number of running child processes to parent process 8816: 1
[2025-12-14 22:07:27] 2025-12-15 03:06:33,451 | INFO     | maximum number of monitored processes: 6
[2025-12-14 22:07:27] 2025-12-15 03:06:33,451 | INFO     | aborting job monitoring since job object (job id=6930660090) has expired
[2025-12-14 22:07:27] 2025-12-15 03:06:34,386 | INFO     | --- collectZombieJob: --- 10, [8816]
[2025-12-14 22:07:27] 2025-12-15 03:06:34,386 | INFO     | zombie collector waiting for pid 8816
[2025-12-14 22:07:27] 2025-12-15 03:06:34,386 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 22:07:27] 2025-12-15 03:06:34,386 | INFO     | collected zombie processes
[2025-12-14 22:07:27] 2025-12-15 03:06:34,387 | INFO     | will attempt to kill all subprocesses of pid=8816
[2025-12-14 22:07:27] 2025-12-15 03:06:34,475 | INFO     | process IDs to be killed: [8816] (in reverse order)
[2025-12-14 22:07:27] 2025-12-15 03:06:34,525 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 22:07:27] 2025-12-15 03:06:34,526 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 22:07:27] 2025-12-15 03:06:34,529 | INFO     | did not find any defunct processes belonging to 8816
[2025-12-14 22:07:27] 2025-12-15 03:06:34,532 | INFO     | did not find any defunct processes belonging to 8816
[2025-12-14 22:07:27] 2025-12-15 03:06:34,532 | INFO     | ready for new job
[2025-12-14 22:07:27] 2025-12-15 03:06:34,532 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 22:07:27] 2025-12-15 03:06:34,533 | INFO     | ***************************************
[2025-12-14 22:07:27] 2025-12-15 03:06:34,533 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 22:07:27] 2025-12-15 03:06:34,533 | INFO     | ***************************************
[2025-12-14 22:07:27] 2025-12-15 03:06:34,534 | INFO     | 
[2025-12-14 22:07:27] 2025-12-15 03:06:34,534 | INFO     | architecture information:
[2025-12-14 22:07:27] 2025-12-15 03:06:34,535 | INFO     | executing command: cat /etc/os-release
[2025-12-14 22:07:27] 2025-12-15 03:06:34,548 | INFO     | cat /etc/os-release:
[2025-12-14 22:07:27] NAME="CentOS Linux"
[2025-12-14 22:07:27] VERSION="7 (Core)"
[2025-12-14 22:07:27] ID="centos"
[2025-12-14 22:07:27] ID_LIKE="rhel fedora"
[2025-12-14 22:07:27] VERSION_ID="7"
[2025-12-14 22:07:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 22:07:27] ANSI_COLOR="0;31"
[2025-12-14 22:07:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 22:07:27] HOME_URL="https://www.centos.org/"
[2025-12-14 22:07:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 22:07:27] 
[2025-12-14 22:07:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 22:07:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 22:07:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 22:07:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 22:07:27] 
[2025-12-14 22:07:27] 2025-12-15 03:06:34,548 | INFO     | ***************************************
[2025-12-14 22:07:27] 2025-12-15 03:06:35,051 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-14 22:07:27] 2025-12-15 03:06:35,067 | INFO     | sufficient remaining disk space (29416751104 B)
[2025-12-14 22:07:27] 2025-12-15 03:06:35,067 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 22:07:27] 2025-12-15 03:06:35,068 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 22:07:27] 2025-12-15 03:06:35,068 | INFO     | update_server=False
[2025-12-14 22:07:27] 2025-12-15 03:06:35,068 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 22:07:27] 2025-12-15 03:06:35,068 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 22:07:27] 2025-12-15 03:06:35,069 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 22:07:27] 2025-12-15 03:06:35,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 22:07:27] 2025-12-15 03:06:35,069 | INFO     | aborting loop
[2025-12-14 22:07:27] 2025-12-15 03:06:35,181 | INFO     | all data control threads have been joined
[2025-12-14 22:07:27] 2025-12-15 03:06:35,187 | INFO     | all job control threads have been joined
[2025-12-14 22:07:27] 2025-12-15 03:06:35,313 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 22:07:27] 2025-12-15 03:06:36,074 | INFO     | [job] retrieve thread has finished
[2025-12-14 22:07:27] 2025-12-15 03:06:36,074 | INFO     | [job] job monitor thread has finished
[2025-12-14 22:07:27] 2025-12-15 03:06:36,075 | INFO     | [job] queue monitor thread has finished
[2025-12-14 22:07:27] 2025-12-15 03:06:36,183 | INFO     | [data] control thread has finished
[2025-12-14 22:07:27] 2025-12-15 03:06:36,193 | INFO     | [job] control thread has finished
[2025-12-14 22:07:27] 2025-12-15 03:06:36,220 | INFO     | all payload control threads have been joined
[2025-12-14 22:07:27] 2025-12-15 03:06:36,394 | INFO     | [data] copytool_in thread has finished
[2025-12-14 22:07:27] 2025-12-15 03:06:36,618 | INFO     | [payload] validate_post thread has finished
[2025-12-14 22:07:27] 2025-12-15 03:06:36,869 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 22:07:27] 2025-12-15 03:06:37,020 | INFO     | [job] validate thread has finished
[2025-12-14 22:07:27] 2025-12-15 03:06:37,226 | INFO     | [payload] control thread has finished
[2025-12-14 22:07:27] 2025-12-15 03:06:37,318 | INFO     | [data] copytool_out thread has finished
[2025-12-14 22:07:27] 2025-12-15 03:06:37,348 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 22:07:27] 2025-12-15 03:06:37,506 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 22:07:27] 2025-12-15 03:06:37,652 | INFO     | [payload] failed_post thread has finished
[2025-12-14 22:07:27] 2025-12-15 03:06:39,074 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 22:07:27] 2025-12-15 03:06:45,412 | INFO     | job.realtimelogging is not enabled
[2025-12-14 22:07:27] 2025-12-15 03:06:46,415 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 22:07:27] 2025-12-15 03:07:05,453 | INFO     | PID=2438 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-14 22:07:27] 2025-12-15 03:07:05,453 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 22:07:27] 2025-12-15 03:07:05,453 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 22:07:27] 2025-12-15 03:07:05,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 22:07:27] 2025-12-15 03:07:20,404 | INFO     | [monitor] cgroup control has ended
[2025-12-14 22:07:27] 2025-12-15 03:07:21,902 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140181088479040)>', '<ExcThread(monitor, started 140180249884416)>']
[2025-12-14 22:07:27] 2025-12-15 03:07:22,539 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 22:07:27] 2025-12-15 03:07:22,539 | INFO     | [monitor] control thread has ended
[2025-12-14 22:07:27] 2025-12-15 03:07:26,928 | INFO     | all workflow threads have been joined
[2025-12-14 22:07:27] 2025-12-15 03:07:26,928 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 22:07:27] 2025-12-15 03:07:26,928 | INFO     | traces error code: 0
[2025-12-14 22:07:27] 2025-12-15 03:07:26,929 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 22:07:27] 2025-12-15 03:07:27,023 [wrapper] ==== pilot stdout END ====
[2025-12-14 22:07:27] 2025-12-15 03:07:27,027 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 22:07:27] 2025-12-15 03:07:27,030 [wrapper] pilotpid: 2438
[2025-12-14 22:07:27] 2025-12-15 03:07:27,034 [wrapper] Pilot exit status: 0
[2025-12-14 22:07:27] 2025-12-15 03:07:27,048 [wrapper] pandaids: 6930660090
[2025-12-14 22:07:27] 2025-12-15 03:07:27,097 [wrapper] cleanup supervisor_pilot 31232 2439
[2025-12-14 22:07:27] 2025-12-15 03:07:27,101 [wrapper] Test setup, not cleaning
[2025-12-14 22:07:27] 2025-12-15 03:07:27,105 [wrapper] apfmon messages muted
[2025-12-14 22:07:27] 2025-12-15 03:07:27,109 [wrapper] ==== wrapper stdout END ====
[2025-12-14 22:07:27] 2025-12-15 03:07:27,112 [wrapper] ==== wrapper stderr END ====
[2025-12-14 22:07:27]  *** Error codes and diagnostics ***
[2025-12-14 22:07:27]     "exeErrorCode": 0,
[2025-12-14 22:07:27]     "exeErrorDiag": "",
[2025-12-14 22:07:27]     "pilotErrorCode": 0,
[2025-12-14 22:07:27]     "pilotErrorDiag": "",
[2025-12-14 22:07:27]  *** Listing of results directory ***
[2025-12-14 22:07:27] total 370176
[2025-12-14 22:07:27] -rw-r--r-- 1 boincer umatlas    579449 Dec 14 10:56 pilot3.tar.gz
[2025-12-14 22:07:27] -rw-r--r-- 1 boincer umatlas      5112 Dec 14 10:56 queuedata.json
[2025-12-14 22:07:27] -rwx------ 1 boincer umatlas     36322 Dec 14 10:57 runpilot2-wrapper.sh
[2025-12-14 22:07:27] -rw-r--r-- 1 boincer umatlas       100 Dec 14 20:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 22:07:27] -rwxr-xr-x 1 boincer umatlas      7986 Dec 14 20:58 run_atlas
[2025-12-14 22:07:27] -rw-r--r-- 1 boincer umatlas       105 Dec 14 20:58 job.xml
[2025-12-14 22:07:27] -rw-r--r-- 2 boincer umatlas 197130378 Dec 14 20:58 EVNT.47898875._000059.pool.root.1
[2025-12-14 22:07:27] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 20:58 start_atlas.sh
[2025-12-14 22:07:27] drwxrwx--x 2 boincer umatlas      4096 Dec 14 20:58 shared
[2025-12-14 22:07:27] -rw-r--r-- 2 boincer umatlas    592392 Dec 14 20:58 input.tar.gz
[2025-12-14 22:07:27] -rw-r--r-- 1 boincer umatlas         0 Dec 14 20:58 boinc_lockfile
[2025-12-14 22:07:27] -rw-r--r-- 1 boincer umatlas      2499 Dec 14 20:58 pandaJob.out
[2025-12-14 22:07:27] -rw------- 1 boincer umatlas        57 Dec 14 20:59 setup.sh.local
[2025-12-14 22:07:27] -rw------- 1 boincer umatlas    991024 Dec 14 20:59 agis_schedconf.cvmfs.json
[2025-12-14 22:07:27] -rw------- 1 boincer umatlas   1516240 Dec 14 20:59 agis_ddmendpoints.agis.ALL.json
[2025-12-14 22:07:27] drwx------ 5 boincer umatlas      4096 Dec 14 20:59 pilot3
[2025-12-14 22:07:27] -rw-r--r-- 1 boincer umatlas      5953 Dec 14 22:03 init_data.xml
[2025-12-14 22:07:27] -rw------- 1 boincer umatlas 176085636 Dec 14 22:05 HITS.47898878._001491.pool.root.1
[2025-12-14 22:07:27] -rw-r--r-- 1 boincer umatlas       529 Dec 14 22:06 boinc_task_state.xml
[2025-12-14 22:07:27] -rw------- 1 boincer umatlas        95 Dec 14 22:06 pilot_heartbeat.json
[2025-12-14 22:07:27] -rw------- 1 boincer umatlas      1046 Dec 14 22:06 memory_monitor_summary.json
[2025-12-14 22:07:27] -rw------- 1 boincer umatlas    376380 Dec 14 22:06 log.47898878._001491.job.log.tgz.1
[2025-12-14 22:07:27] -rw------- 1 boincer umatlas      7839 Dec 14 22:06 heartbeat.json
[2025-12-14 22:07:27] -rw-r--r-- 1 boincer umatlas      8192 Dec 14 22:07 boinc_mmap_file
[2025-12-14 22:07:27] -rw-r--r-- 1 boincer umatlas        27 Dec 14 22:07 wrapper_checkpoint.txt
[2025-12-14 22:07:27] -rw------- 1 boincer umatlas      4817 Dec 14 22:07 pilotlog.txt
[2025-12-14 22:07:27] -rw------- 1 boincer umatlas    591071 Dec 14 22:07 log.47898878._001491.job.log.1
[2025-12-14 22:07:27] -rw------- 1 boincer umatlas       357 Dec 14 22:07 output.list
[2025-12-14 22:07:27] -rw-r--r-- 1 boincer umatlas       620 Dec 14 22:07 runtime_log
[2025-12-14 22:07:27] -rw------- 1 boincer umatlas    983040 Dec 14 22:07 result.tar.gz
[2025-12-14 22:07:27] -rw-r--r-- 1 boincer umatlas      9344 Dec 14 22:07 runtime_log.err
[2025-12-14 22:07:27] -rw------- 1 boincer umatlas       659 Dec 14 22:07 N3IMDm9d3o8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLcRKDmJZzoum.diag
[2025-12-14 22:07:27] -rw-r--r-- 1 boincer umatlas     22870 Dec 14 22:07 stderr.txt
[2025-12-14 22:07:27] HITS file was successfully produced:
[2025-12-14 22:07:27] -rw------- 1 boincer umatlas 176085636 Dec 14 22:05 shared/HITS.pool.root.1
[2025-12-14 22:07:27]  *** Contents of shared directory: ***
[2025-12-14 22:07:27] total 366032
[2025-12-14 22:07:27] -rw-r--r-- 2 boincer umatlas 197130378 Dec 14 20:58 ATLAS.root_0
[2025-12-14 22:07:27] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 20:58 start_atlas.sh
[2025-12-14 22:07:27] -rw-r--r-- 2 boincer umatlas    592392 Dec 14 20:58 input.tar.gz
[2025-12-14 22:07:27] -rw------- 1 boincer umatlas 176085636 Dec 14 22:05 HITS.pool.root.1
[2025-12-14 22:07:27] -rw------- 1 boincer umatlas    983040 Dec 14 22:07 result.tar.gz
22:07:28 (31021): run_atlas exited; CPU time 43844.409044
22:07:28 (31021): called boinc_finish(0)

</stderr_txt>
]]>

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