Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:11:32 (25263): wrapper (7.7.26015): starting
18:11:32 (25263): wrapper: running run_atlas (--nthreads 12)
[2025-12-14 18:11:32] Arguments: --nthreads 12
[2025-12-14 18:11:32] Threads: 12
[2025-12-14 18:11:32] Checking for CVMFS
[2025-12-14 18:11:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 18:11:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 18:11:33] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 18:11:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 18:11:34] 2.11.5.0 1525032 19940 379980 154014 3 842 26481162 45568001 18623 130560 0 120921132 99.755 99930102 25507 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-14 18:11:34] CVMFS is ok
[2025-12-14 18:11:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 18:11:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 18:11:34] Further information can be found at the LHC@home message board.
[2025-12-14 18:11:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 18:11:34] Checking for apptainer binary...
[2025-12-14 18:11:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 18:11:34] Running /usr/bin/apptainer --version
[2025-12-14 18:11:34] apptainer version 1.4.1-1.el9
[2025-12-14 18:11:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 18:11:35] wns0053.triumf.lcg
[2025-12-14 18:11:35] apptainer works
[2025-12-14 18:11:35] Set ATHENA_PROC_NUMBER=12
[2025-12-14 18:11:35] Set ATHENA_CORE_NUMBER=12
[2025-12-14 18:11:35] Starting ATLAS job with PandaID=6929482761
[2025-12-14 18:11:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 18:18:26]  *** The last 200 lines of the pilot log: ***
[2025-12-14 18:18:26] 2025-12-15 02:17:27,107 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | WARNING  | wrong length of table data, x=[1765764863.0], y=[1387.0] (must be same and length>=4)
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | could have reported an average CPU frequency of 2601 MHz (4 samples)
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | ..............................
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . Timing measurements:
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . get job = 0 s
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . initial setup = 4 s
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . payload setup = 31 s
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . stage-in = 0 s
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . payload execution = 61 s
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . stage-out = 1 s
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . log creation = 0 s
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | ..............................
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-14 18:18:26] 2025-12-15 02:17:27,109 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929482761/pilotlog.txt
[2025-12-14 18:18:26] 2025-12-15 02:17:27,250 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-14 18:18:26] - Log from pilotlog.txt -
[2025-12-14 18:18:26] 2025-12-15 02:17:27,084 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929482761/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 18:18:26] 2025-12-15 02:17:27,085 | INFO     | extracted standard info from prmon json
[2025-12-14 18:18:26] 2025-12-15 02:17:27,085 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 18:18:26] 2025-12-15 02:17:27,085 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 18:18:26] 2025-12-15 02:17:27,107 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 18:18:26] 2025-12-15 02:17:27,107 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | WARNING  | wrong length of table data, x=[1765764863.0], y=[1387.0] (must be same and length>=4)
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | could have reported an average CPU frequency of 2601 MHz (4 samples)
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | ..............................
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . Timing measurements:
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . get job = 0 s
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . initial setup = 4 s
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . payload setup = 31 s
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . stage-in = 0 s
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . payload execution = 61 s
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . stage-out = 1 s
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . log creation = 0 s
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | ..............................
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-14 18:18:26] 2025-12-15 02:17:27,109 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929482761/pilotlog.txt
[2025-12-14 18:18:26] 2025-12-15 02:17:27,251 | WARNING  | 
[2025-12-14 18:18:26] [begin log extracts]
[2025-12-14 18:18:26] - Log from pilotlog.txt -
[2025-12-14 18:18:26] 2025-12-15 02:17:27,084 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929482761/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 18:18:26] 2025-12-15 02:17:27,085 | INFO     | extracted standard info from prmon json
[2025-12-14 18:18:26] 2025-12-15 02:17:27,085 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 18:18:26] 2025-12-15 02:17:27,085 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 18:18:26] 2025-12-15 02:17:27,107 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 18:18:26] 2025-12-15 02:17:27,107 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | WARNING  | wrong length of table data, x=[1765764863.0], y=[1387.0] (must be same and length>=4)
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | could have reported an average CPU frequency of 2601 MHz (4 samples)
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | ..............................
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . Timing measurements:
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . get job = 0 s
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . initial setup = 4 s
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . payload setup = 31 s
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . stage-in = 0 s
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . payload execution = 61 s
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . stage-out = 1 s
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | . log creation = 0 s
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | ..............................
[2025-12-14 18:18:26] 2025-12-15 02:17:27,108 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-14 18:18:26] 2025-12-15 02:17:27,109 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929482761/pilotlog.txt
[2025-12-14 18:18:26] [end log extracts]
[2025-12-14 18:18:26] 2025-12-15 02:17:27,251 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-14 18:18:26] 2025-12-15 02:17:27,252 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-14 18:18:26] 2025-12-15 02:17:27,491 | INFO     | PID=29119 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 18:18:26] 2025-12-15 02:17:27,491 | INFO     | .. there are 42 such processes running
[2025-12-14 18:18:26] 2025-12-15 02:17:27,675 | INFO     | 
[2025-12-14 18:18:26] 2025-12-15 02:17:27,675 | INFO     | job summary report
[2025-12-14 18:18:26] 2025-12-15 02:17:27,675 | INFO     | --------------------------------------------------
[2025-12-14 18:18:26] 2025-12-15 02:17:27,675 | INFO     | PanDA job id: 6929482761
[2025-12-14 18:18:26] 2025-12-15 02:17:27,675 | INFO     | task id: 47898782
[2025-12-14 18:18:26] 2025-12-15 02:17:27,675 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-14 18:14:50,917 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-14 18:18:26] 2025-12-15 02:17:27,675 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 18:18:26] 2025-12-15 02:17:27,675 | INFO     | pilot state: failed 
[2025-12-14 18:18:26] 2025-12-15 02:17:27,675 | INFO     | transexitcode: 65
[2025-12-14 18:18:26] 2025-12-15 02:17:27,676 | INFO     | exeerrorcode: 65
[2025-12-14 18:18:26] 2025-12-15 02:17:27,676 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-14 18:18:26] 2025-12-15 02:17:27,676 | INFO     | exitcode: 65
[2025-12-14 18:18:26] 2025-12-15 02:17:27,676 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-14 18:18:26] 2025-12-15 02:17:27,676 | INFO     | cpuconsumptiontime: 17 s
[2025-12-14 18:18:26] 2025-12-15 02:17:27,676 | INFO     | nevents: 0
[2025-12-14 18:18:26] 2025-12-15 02:17:27,676 | INFO     | neventsw: 0
[2025-12-14 18:18:26] 2025-12-15 02:17:27,676 | INFO     | pid: 36114
[2025-12-14 18:18:26] 2025-12-15 02:17:27,676 | INFO     | pgrp: 36114
[2025-12-14 18:18:26] 2025-12-15 02:17:27,676 | INFO     | corecount: 12
[2025-12-14 18:18:26] 2025-12-15 02:17:27,676 | INFO     | event service: False
[2025-12-14 18:18:26] 2025-12-15 02:17:27,676 | INFO     | sizes: {0: 2283975, 1: 2283975, 12: 2284003, 23: 2284031, 24: 2284321, 34: 2284349, 97: 2307845, 98: 2312137, 102: 2312165, 244: 2312331}
[2025-12-14 18:18:26] 2025-12-15 02:17:27,676 | INFO     | --------------------------------------------------
[2025-12-14 18:18:26] 2025-12-15 02:17:27,676 | INFO     | 
[2025-12-14 18:18:26] 2025-12-15 02:17:27,676 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-14 18:18:26] 2025-12-15 02:17:27,879 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 18:18:26] 2025-12-15 02:17:27,879 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 18:18:26] 2025-12-15 02:17:27,879 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 18:18:26] 2025-12-15 02:17:27,880 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 18:18:26] 2025-12-15 02:17:27,880 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 18:18:26] 2025-12-15 02:17:27,880 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 18:18:26] 2025-12-15 02:17:27,880 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 18:18:26] 2025-12-15 02:17:27,880 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 18:18:26] 2025-12-15 02:17:27,880 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 18:18:26] 2025-12-15 02:17:27,880 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 18:18:26] 2025-12-15 02:17:27,880 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 18:18:26] 2025-12-15 02:17:27,880 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 18:18:26] 2025-12-15 02:17:27,880 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 18:18:26] 2025-12-15 02:17:27,880 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 18:18:26] 2025-12-15 02:17:27,880 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 18:18:26] 2025-12-15 02:17:27,880 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 18:18:26] 2025-12-15 02:17:27,880 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 18:18:26] 2025-12-15 02:17:27,880 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 18:18:26] 2025-12-15 02:17:27,880 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 18:18:26] 2025-12-15 02:17:27,880 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 18:18:26] 2025-12-15 02:17:27,880 | INFO     | job 6929482761 has completed (purged errors)
[2025-12-14 18:18:26] 2025-12-15 02:17:27,881 | INFO     | overall cleanup function is called
[2025-12-14 18:18:26] 2025-12-15 02:17:28,887 | INFO     | --- collectZombieJob: --- 10, [36114]
[2025-12-14 18:18:26] 2025-12-15 02:17:28,887 | INFO     | zombie collector waiting for pid 36114
[2025-12-14 18:18:26] 2025-12-15 02:17:28,887 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 18:18:26] 2025-12-15 02:17:28,887 | INFO     | collected zombie processes
[2025-12-14 18:18:26] 2025-12-15 02:17:28,887 | INFO     | will attempt to kill all subprocesses of pid=36114
[2025-12-14 18:18:26] 2025-12-15 02:17:30,050 | INFO     | process IDs to be killed: [36114] (in reverse order)
[2025-12-14 18:18:26] 2025-12-15 02:17:30,271 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 18:18:26] 2025-12-15 02:17:30,272 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 18:18:26] 2025-12-15 02:17:30,283 | INFO     | did not find any defunct processes belonging to 36114
[2025-12-14 18:18:26] 2025-12-15 02:17:30,291 | INFO     | did not find any defunct processes belonging to 36114
[2025-12-14 18:18:26] 2025-12-15 02:17:30,292 | INFO     | ready for new job
[2025-12-14 18:18:26] 2025-12-15 02:17:30,292 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 18:18:26] 2025-12-15 02:17:30,293 | INFO     | ***************************************
[2025-12-14 18:18:26] 2025-12-15 02:17:30,293 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 18:18:26] 2025-12-15 02:17:30,294 | INFO     | ***************************************
[2025-12-14 18:18:26] 2025-12-15 02:17:30,294 | INFO     | 
[2025-12-14 18:18:26] 2025-12-15 02:17:30,295 | INFO     | architecture information:
[2025-12-14 18:18:26] 2025-12-15 02:17:30,309 | INFO     | executing command: cat /etc/os-release
[2025-12-14 18:18:26] 2025-12-15 02:17:30,369 | INFO     | cat /etc/os-release:
[2025-12-14 18:18:26] NAME="CentOS Linux"
[2025-12-14 18:18:26] VERSION="7 (Core)"
[2025-12-14 18:18:26] ID="centos"
[2025-12-14 18:18:26] ID_LIKE="rhel fedora"
[2025-12-14 18:18:26] VERSION_ID="7"
[2025-12-14 18:18:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 18:18:26] ANSI_COLOR="0;31"
[2025-12-14 18:18:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 18:18:26] HOME_URL="https://www.centos.org/"
[2025-12-14 18:18:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 18:18:26] 
[2025-12-14 18:18:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 18:18:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 18:18:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 18:18:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 18:18:26] 
[2025-12-14 18:18:26] 2025-12-15 02:17:30,369 | INFO     | ***************************************
[2025-12-14 18:18:26] 2025-12-15 02:17:30,873 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-14 18:18:26] 2025-12-15 02:17:30,955 | INFO     | sufficient remaining disk space (1980574466048 B)
[2025-12-14 18:18:26] 2025-12-15 02:17:30,955 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 18:18:26] 2025-12-15 02:17:30,955 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 18:18:26] 2025-12-15 02:17:30,955 | INFO     | update_server=False
[2025-12-14 18:18:26] 2025-12-15 02:17:30,955 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 18:18:26] 2025-12-15 02:17:30,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 18:18:26] 2025-12-15 02:17:30,962 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 18:18:26] 2025-12-15 02:17:30,962 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 18:18:26] 2025-12-15 02:17:30,962 | INFO     | aborting loop
[2025-12-14 18:18:26] 2025-12-15 02:17:31,356 | INFO     | all payload control threads have been joined
[2025-12-14 18:18:26] 2025-12-15 02:17:31,497 | INFO     | all job control threads have been joined
[2025-12-14 18:18:26] 2025-12-15 02:17:31,929 | INFO     | all data control threads have been joined
[2025-12-14 18:18:26] 2025-12-15 02:17:31,961 | INFO     | [job] retrieve thread has finished
[2025-12-14 18:18:26] 2025-12-15 02:17:31,967 | INFO     | [job] job monitor thread has finished
[2025-12-14 18:18:26] 2025-12-15 02:17:32,042 | INFO     | [payload] validate_post thread has finished
[2025-12-14 18:18:26] 2025-12-15 02:17:32,193 | INFO     | [job] validate thread has finished
[2025-12-14 18:18:26] 2025-12-15 02:17:32,299 | INFO     | [payload] failed_post thread has finished
[2025-12-14 18:18:26] 2025-12-15 02:17:32,362 | INFO     | [payload] control thread has finished
[2025-12-14 18:18:26] 2025-12-15 02:17:32,428 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 18:18:26] 2025-12-15 02:17:32,438 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 18:18:26] 2025-12-15 02:17:32,503 | INFO     | [job] control thread has finished
[2025-12-14 18:18:26] 2025-12-15 02:17:32,849 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 18:18:26] 2025-12-15 02:17:32,857 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 18:18:26] 2025-12-15 02:17:32,887 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 18:18:26] 2025-12-15 02:17:32,944 | INFO     | [data] control thread has finished
[2025-12-14 18:18:26] 2025-12-15 02:17:32,973 | INFO     | [data] copytool_out thread has finished
[2025-12-14 18:18:26] 2025-12-15 02:17:33,241 | INFO     | [data] copytool_in thread has finished
[2025-12-14 18:18:26] 2025-12-15 02:17:33,434 | INFO     | [job] queue monitor thread has finished
[2025-12-14 18:18:26] 2025-12-15 02:17:34,975 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 18:18:26] 2025-12-15 02:17:59,813 | INFO     | PID=29119 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 18:18:26] 2025-12-15 02:17:59,813 | INFO     | .. there are 42 such processes running
[2025-12-14 18:18:26] 2025-12-15 02:17:59,813 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 18:18:26] 2025-12-15 02:17:59,813 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 18:18:26] 2025-12-15 02:17:59,813 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 18:18:26] 2025-12-15 02:18:19,681 | INFO     | [monitor] cgroup control has ended
[2025-12-14 18:18:26] 2025-12-15 02:18:19,854 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140573916170048)>', '<ExcThread(monitor, started 140573356824320)>']
[2025-12-14 18:18:26] 2025-12-15 02:18:19,943 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 18:18:26] 2025-12-15 02:18:19,943 | INFO     | [monitor] control thread has ended
[2025-12-14 18:18:26] 2025-12-15 02:18:24,894 | INFO     | all workflow threads have been joined
[2025-12-14 18:18:26] 2025-12-15 02:18:24,894 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 18:18:26] 2025-12-15 02:18:24,894 | INFO     | traces error code: 0
[2025-12-14 18:18:26] 2025-12-15 02:18:24,895 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 18:18:26] 2025-12-15 02:18:25,538 [wrapper] ==== pilot stdout END ====
[2025-12-14 18:18:26] 2025-12-15 02:18:25,561 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 18:18:26] 2025-12-15 02:18:25,596 [wrapper] pilotpid: 29119
[2025-12-14 18:18:26] 2025-12-15 02:18:25,610 [wrapper] Pilot exit status: 0
[2025-12-14 18:18:26] 2025-12-15 02:18:25,678 [wrapper] pandaids: 6929482761
[2025-12-14 18:18:26] 2025-12-15 02:18:26,176 [wrapper] cleanup supervisor_pilot   29125 29120
[2025-12-14 18:18:26] 2025-12-15 02:18:26,222 [wrapper] Test setup, not cleaning
[2025-12-14 18:18:26] 2025-12-15 02:18:26,231 [wrapper] apfmon messages muted
[2025-12-14 18:18:26] 2025-12-15 02:18:26,279 [wrapper] ==== wrapper stdout END ====
[2025-12-14 18:18:26] 2025-12-15 02:18:26,289 [wrapper] ==== wrapper stderr END ====
[2025-12-14 18:18:26]  *** Error codes and diagnostics ***
[2025-12-14 18:18:26]     "exeErrorCode": 65,
[2025-12-14 18:18:26]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-14 18:18:26]     "pilotErrorCode": 1305,
[2025-12-14 18:18:26]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-14 18:18:26]  *** Listing of results directory ***
[2025-12-14 18:18:26] total 216636
[2025-12-14 18:18:26] -rw-r--r--. 1 boinc boinc    579449 Dec 14 12:38 pilot3.tar.gz
[2025-12-14 18:18:26] -rwx------. 1 boinc boinc     36322 Dec 14 12:41 runpilot2-wrapper.sh
[2025-12-14 18:18:26] -rw-r--r--. 1 boinc boinc      5112 Dec 14 12:43 queuedata.json
[2025-12-14 18:18:26] -rw-r--r--. 1 boinc boinc       100 Dec 14 18:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 18:18:26] -rwxr-xr-x. 1 boinc boinc      7986 Dec 14 18:11 run_atlas
[2025-12-14 18:18:26] -rw-r--r--. 1 boinc boinc       105 Dec 14 18:11 job.xml
[2025-12-14 18:18:26] -rw-r--r--. 1 boinc boinc      6595 Dec 14 18:11 init_data.xml
[2025-12-14 18:18:26] -rw-r--r--. 2 boinc boinc 217685952 Dec 14 18:11 EVNT.47898779._000164.pool.root.1
[2025-12-14 18:18:26] -rw-r--r--. 2 boinc boinc     15847 Dec 14 18:11 start_atlas.sh
[2025-12-14 18:18:26] drwxrwx--x. 2 boinc boinc      4096 Dec 14 18:11 shared
[2025-12-14 18:18:26] -rw-r--r--. 2 boinc boinc    592395 Dec 14 18:11 input.tar.gz
[2025-12-14 18:18:26] -rw-r--r--. 1 boinc boinc         0 Dec 14 18:11 boinc_lockfile
[2025-12-14 18:18:26] -rw-r--r--. 1 boinc boinc      2521 Dec 14 18:11 pandaJob.out
[2025-12-14 18:18:26] -rw-------. 1 boinc boinc    991024 Dec 14 18:12 agis_schedconf.cvmfs.json
[2025-12-14 18:18:26] -rw-------. 1 boinc boinc   1516240 Dec 14 18:12 agis_ddmendpoints.agis.ALL.json
[2025-12-14 18:18:26] drwx------. 5 boinc boinc      4096 Dec 14 18:12 pilot3
[2025-12-14 18:18:26] -rw-r--r--. 1 boinc boinc       525 Dec 14 18:14 boinc_task_state.xml
[2025-12-14 18:18:26] -rw-------. 1 boinc boinc       966 Dec 14 18:14 memory_monitor_summary.json
[2025-12-14 18:18:26] -rw-------. 1 boinc boinc     22166 Dec 14 18:15 log.47898782._003923.job.log.tgz.1
[2025-12-14 18:18:26] -rw-------. 1 boinc boinc        95 Dec 14 18:17 pilot_heartbeat.json
[2025-12-14 18:18:26] -rw-------. 1 boinc boinc      8397 Dec 14 18:17 heartbeat.json
[2025-12-14 18:18:26] -rw-r--r--. 1 boinc boinc      8192 Dec 14 18:18 boinc_mmap_file
[2025-12-14 18:18:26] -rw-------. 1 boinc boinc      4821 Dec 14 18:18 pilotlog.txt
[2025-12-14 18:18:26] -rw-r--r--. 1 boinc boinc        23 Dec 14 18:18 wrapper_checkpoint.txt
[2025-12-14 18:18:26] -rw-------. 1 boinc boinc     97290 Dec 14 18:18 log.47898782._003923.job.log.1
[2025-12-14 18:18:26] -rw-------. 1 boinc boinc       188 Dec 14 18:18 output.list
[2025-12-14 18:18:26] -rw-r--r--. 1 boinc boinc       620 Dec 14 18:18 runtime_log
[2025-12-14 18:18:26] -rw-------. 1 boinc boinc    143360 Dec 14 18:18 result.tar.gz
[2025-12-14 18:18:26] -rw-------. 1 boinc boinc       645 Dec 14 18:18 Y7bKDmT57o8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSASKDmxlaepm.diag
[2025-12-14 18:18:26] -rw-r--r--. 1 boinc boinc      8636 Dec 14 18:18 runtime_log.err
[2025-12-14 18:18:26] -rw-r--r--. 1 boinc boinc     21917 Dec 14 18:18 stderr.txt
[2025-12-14 18:18:27] No HITS result produced
[2025-12-14 18:18:27]  *** Contents of shared directory: ***
[2025-12-14 18:18:27] total 213320
[2025-12-14 18:18:27] -rw-r--r--. 2 boinc boinc 217685952 Dec 14 18:11 ATLAS.root_0
[2025-12-14 18:18:27] -rw-r--r--. 2 boinc boinc     15847 Dec 14 18:11 start_atlas.sh
[2025-12-14 18:18:27] -rw-r--r--. 2 boinc boinc    592395 Dec 14 18:11 input.tar.gz
[2025-12-14 18:18:27] -rw-------. 1 boinc boinc    143360 Dec 14 18:18 result.tar.gz
18:18:28 (25263): run_atlas exited; CPU time 31.606108
18:18:28 (25263): called boinc_finish(0)

</stderr_txt>
]]>

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