Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:28:32 (29272): wrapper (7.7.26015): starting
08:28:32 (29272): wrapper: running run_atlas (--nthreads 8)
[2025-12-15 08:28:32] Arguments: --nthreads 8
[2025-12-15 08:28:32] Threads: 8
[2025-12-15 08:28:32] Checking for CVMFS
[2025-12-15 08:28:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 08:28:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 08:28:33] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 08:28:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 08:28:35] 2.11.2.0 29536 115191 127140 154023 0 60 23887278 25165824 4277 130560 12 33808568 99.859 21525867 1949 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-15 08:28:35] CVMFS is ok
[2025-12-15 08:28:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 08:28:35] Checking for apptainer binary...
[2025-12-15 08:28:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 08:28:35] Running /usr/bin/apptainer --version
[2025-12-15 08:28:35] apptainer version 1.3.2-1.el7
[2025-12-15 08:28:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 08:28:44] cg-vwn448.simple-grid.lan
[2025-12-15 08:28:44] apptainer works
[2025-12-15 08:28:44] Set ATHENA_PROC_NUMBER=8
[2025-12-15 08:28:44] Set ATHENA_CORE_NUMBER=8
[2025-12-15 08:28:44] Starting ATLAS job with PandaID=6929464672
[2025-12-15 08:28:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/25 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 12:13:16]  *** The last 200 lines of the pilot log: ***
[2025-12-15 12:13:16] 2025-12-15 11:12:42,265 | INFO     | log transfer has been attempted: DONE
[2025-12-15 12:13:16] 2025-12-15 11:12:42,265 | INFO     | job 6929464672 has finished - writing final server update
[2025-12-15 12:13:16] 2025-12-15 11:12:42,265 | INFO     | total number of processed events: 400 (read)
[2025-12-15 12:13:16] 2025-12-15 11:12:42,265 | INFO     | executing command: lscpu
[2025-12-15 12:13:16] 2025-12-15 11:12:42,276 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-15 12:13:16] 2025-12-15 11:12:42,378 | INFO     | time since job start (13374s) is within the limit (174528.0s)
[2025-12-15 12:13:16] 2025-12-15 11:12:44,141 | INFO     | monitor loop #912: job 0:6929464672 is in state 'finished'
[2025-12-15 12:13:16] 2025-12-15 11:12:44,141 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 12:13:16] 2025-12-15 11:12:44,325 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-15 12:13:16] 2025-12-15 11:12:44,325 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-15 12:13:16] 2025-12-15 11:12:44,326 | INFO     | using path: /var/lib/boinc/slots/25/PanDA_Pilot-6929464672/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 12:13:16] 2025-12-15 11:12:44,327 | INFO     | extracted standard info from prmon json
[2025-12-15 12:13:16] 2025-12-15 11:12:44,327 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 12:13:16] 2025-12-15 11:12:44,327 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 12:13:16] 2025-12-15 11:12:44,327 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 12:13:16] 2025-12-15 11:12:44,327 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 12:13:16] 2025-12-15 11:12:44,329 | INFO     | fitting pss+swap vs Time
[2025-12-15 12:13:16] 2025-12-15 11:12:44,329 | INFO     | sum of square deviations: 2750295288.0
[2025-12-15 12:13:16] 2025-12-15 11:12:44,330 | INFO     | sum of deviations: -24592368685.0
[2025-12-15 12:13:16] 2025-12-15 11:12:44,330 | INFO     | mean x: 1765790120.0
[2025-12-15 12:13:16] 2025-12-15 11:12:44,330 | INFO     | mean y: 2548881.884057971
[2025-12-15 12:13:16] 2025-12-15 11:12:44,330 | INFO     | intersect: 15791748623.759335
[2025-12-15 12:13:16] 2025-12-15 11:12:44,330 | INFO     | chi2: 1.7816191208564225
[2025-12-15 12:13:16] 2025-12-15 11:12:44,330 | INFO     | sum of square deviations: 2555770710.5
[2025-12-15 12:13:16] 2025-12-15 11:12:44,331 | INFO     | sum of deviations: -23711291883.0
[2025-12-15 12:13:16] 2025-12-15 11:12:44,331 | INFO     | mean x: 1765789967.5
[2025-12-15 12:13:16] 2025-12-15 11:12:44,331 | INFO     | mean y: 2549572.792079208
[2025-12-15 12:13:16] 2025-12-15 11:12:44,331 | INFO     | intersect: 16384755203.153374
[2025-12-15 12:13:16] 2025-12-15 11:12:44,331 | INFO     | chi2: 1.7792859066791211
[2025-12-15 12:13:16] 2025-12-15 11:12:44,331 | INFO     | current chi2=1.7792859066791211 (change=0.13096032423472165 %)
[2025-12-15 12:13:16] 2025-12-15 11:12:44,331 | INFO     | right removable region: 201
[2025-12-15 12:13:16] 2025-12-15 11:12:44,332 | INFO     | sum of square deviations: 2555770710.5
[2025-12-15 12:13:16] 2025-12-15 11:12:44,332 | INFO     | sum of deviations: -57838123346.50001
[2025-12-15 12:13:16] 2025-12-15 11:12:44,332 | INFO     | mean x: 1765790272.5
[2025-12-15 12:13:16] 2025-12-15 11:12:44,332 | INFO     | mean y: 2574673.8465346536
[2025-12-15 12:13:16] 2025-12-15 11:12:44,332 | INFO     | intersect: 39963121668.66071
[2025-12-15 12:13:16] 2025-12-15 11:12:44,332 | INFO     | chi2: 0.23179340707596882
[2025-12-15 12:13:16] 2025-12-15 11:12:44,332 | INFO     | current chi2=0.23179340707596882 (change=86.98973285802265 %)
[2025-12-15 12:13:16] 2025-12-15 11:12:44,333 | INFO     | sum of square deviations: 2370641658.0
[2025-12-15 12:13:16] 2025-12-15 11:12:44,333 | INFO     | sum of deviations: -58355783467.999985
[2025-12-15 12:13:16] 2025-12-15 11:12:44,333 | INFO     | mean x: 1765790425.0
[2025-12-15 12:13:16] 2025-12-15 11:12:44,333 | INFO     | mean y: 2575058.61928934
[2025-12-15 12:13:16] 2025-12-15 11:12:44,333 | INFO     | intersect: 43469323119.60677
[2025-12-15 12:13:16] 2025-12-15 11:12:44,334 | INFO     | chi2: 0.20401714425660464
[2025-12-15 12:13:16] 2025-12-15 11:12:44,334 | INFO     | current chi2=0.20401714425660464 (change=11.98319795621309 %)
[2025-12-15 12:13:16] 2025-12-15 11:12:44,334 | INFO     | left removable region: 20
[2025-12-15 12:13:16] 2025-12-15 11:12:44,334 | INFO     | sum of square deviations: 1838657730.0
[2025-12-15 12:13:16] 2025-12-15 11:12:44,334 | INFO     | sum of deviations: -47874002126.99999
[2025-12-15 12:13:16] 2025-12-15 11:12:44,334 | INFO     | mean x: 1765790547.0
[2025-12-15 12:13:16] 2025-12-15 11:12:44,334 | INFO     | mean y: 2568651.5248618782
[2025-12-15 12:13:16] 2025-12-15 11:12:44,334 | INFO     | intersect: 45979293423.9568
[2025-12-15 12:13:16] 2025-12-15 11:12:44,335 | INFO     | chi2: 0.19564509205400657
[2025-12-15 12:13:16] 2025-12-15 11:12:44,335 | INFO     | current memory leak: -26.04 B/s (using 181 data points, chi2=0.20)
[2025-12-15 12:13:16] 2025-12-15 11:12:44,335 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2025-12-15 12:13:16] 2025-12-15 11:12:44,335 | INFO     | ..............................
[2025-12-15 12:13:16] 2025-12-15 11:12:44,335 | INFO     | . Timing measurements:
[2025-12-15 12:13:16] 2025-12-15 11:12:44,335 | INFO     | . get job = 0 s
[2025-12-15 12:13:16] 2025-12-15 11:12:44,335 | INFO     | . initial setup = 2 s
[2025-12-15 12:13:16] 2025-12-15 11:12:44,335 | INFO     | . payload setup = 10 s
[2025-12-15 12:13:16] 2025-12-15 11:12:44,335 | INFO     | . stage-in = 0 s
[2025-12-15 12:13:16] 2025-12-15 11:12:44,335 | INFO     | . payload execution = 12640 s
[2025-12-15 12:13:16] 2025-12-15 11:12:44,335 | INFO     | . stage-out = 622 s
[2025-12-15 12:13:16] 2025-12-15 11:12:44,335 | INFO     | . log creation = 0 s
[2025-12-15 12:13:16] 2025-12-15 11:12:44,335 | INFO     | ..............................
[2025-12-15 12:13:16] 2025-12-15 11:12:44,384 | INFO     | 
[2025-12-15 12:13:16] 2025-12-15 11:12:44,384 | INFO     | time since job start (13376s) is within the limit (174528.0s)
[2025-12-15 12:13:16] 2025-12-15 11:12:44,384 | INFO     | job summary report
[2025-12-15 12:13:16] 2025-12-15 11:12:44,385 | INFO     | --------------------------------------------------
[2025-12-15 12:13:16] 2025-12-15 11:12:44,385 | INFO     | PanDA job id: 6929464672
[2025-12-15 12:13:16] 2025-12-15 11:12:44,385 | INFO     | task id: 47898763
[2025-12-15 12:13:16] 2025-12-15 11:12:44,385 | INFO     | errors: (none)
[2025-12-15 12:13:16] 2025-12-15 11:12:44,385 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 12:13:16] 2025-12-15 11:12:44,385 | INFO     | pilot state: finished 
[2025-12-15 12:13:16] 2025-12-15 11:12:44,385 | INFO     | transexitcode: 0
[2025-12-15 12:13:16] 2025-12-15 11:12:44,385 | INFO     | exeerrorcode: 0
[2025-12-15 12:13:16] 2025-12-15 11:12:44,385 | INFO     | exeerrordiag: 
[2025-12-15 12:13:16] 2025-12-15 11:12:44,385 | INFO     | exitcode: 0
[2025-12-15 12:13:16] 2025-12-15 11:12:44,385 | INFO     | exitmsg: OK
[2025-12-15 12:13:16] 2025-12-15 11:12:44,385 | INFO     | cpuconsumptiontime: 64152 s
[2025-12-15 12:13:16] 2025-12-15 11:12:44,385 | INFO     | nevents: 400
[2025-12-15 12:13:16] 2025-12-15 11:12:44,385 | INFO     | neventsw: 0
[2025-12-15 12:13:16] 2025-12-15 11:12:44,385 | INFO     | pid: 7221
[2025-12-15 12:13:16] 2025-12-15 11:12:44,385 | INFO     | pgrp: 7221
[2025-12-15 12:13:16] 2025-12-15 11:12:44,385 | INFO     | corecount: 8
[2025-12-15 12:13:16] 2025-12-15 11:12:44,385 | INFO     | event service: False
[2025-12-15 12:13:16] 2025-12-15 11:12:44,385 | INFO     | sizes: {0: 2283786, 1: 2283985, 8: 2284247, 12: 2284275, 12655: 2313225, 13279: 2320937, 13282: 2321121, 13358: 2321145}
[2025-12-15 12:13:16] 2025-12-15 11:12:44,386 | INFO     | --------------------------------------------------
[2025-12-15 12:13:16] 2025-12-15 11:12:44,386 | INFO     | 
[2025-12-15 12:13:16] 2025-12-15 11:12:44,386 | INFO     | executing command: ls -lF /var/lib/boinc/slots/25
[2025-12-15 12:13:16] 2025-12-15 11:12:44,397 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 12:13:16] 2025-12-15 11:12:44,397 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 12:13:16] 2025-12-15 11:12:44,397 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 12:13:16] 2025-12-15 11:12:44,397 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 12:13:16] 2025-12-15 11:12:44,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 12:13:16] 2025-12-15 11:12:44,398 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 12:13:16] 2025-12-15 11:12:44,398 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 12:13:16] 2025-12-15 11:12:44,398 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 12:13:16] 2025-12-15 11:12:44,398 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 12:13:16] 2025-12-15 11:12:44,398 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 12:13:16] 2025-12-15 11:12:44,398 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 12:13:16] 2025-12-15 11:12:44,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 12:13:16] 2025-12-15 11:12:44,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 12:13:16] 2025-12-15 11:12:44,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 12:13:16] 2025-12-15 11:12:44,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 12:13:16] 2025-12-15 11:12:44,398 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 12:13:16] 2025-12-15 11:12:44,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 12:13:16] 2025-12-15 11:12:44,398 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 12:13:16] 2025-12-15 11:12:44,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 12:13:16] 2025-12-15 11:12:44,398 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 12:13:16] 2025-12-15 11:12:44,398 | INFO     | job 6929464672 has completed (purged errors)
[2025-12-15 12:13:16] 2025-12-15 11:12:44,399 | INFO     | overall cleanup function is called
[2025-12-15 12:13:16] 2025-12-15 11:12:45,405 | INFO     | --- collectZombieJob: --- 10, [7221]
[2025-12-15 12:13:16] 2025-12-15 11:12:45,405 | INFO     | zombie collector waiting for pid 7221
[2025-12-15 12:13:16] 2025-12-15 11:12:45,405 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 12:13:16] 2025-12-15 11:12:45,406 | INFO     | collected zombie processes
[2025-12-15 12:13:16] 2025-12-15 11:12:45,406 | INFO     | will attempt to kill all subprocesses of pid=7221
[2025-12-15 12:13:16] 2025-12-15 11:12:45,431 | INFO     | process IDs to be killed: [7221] (in reverse order)
[2025-12-15 12:13:16] 2025-12-15 11:12:45,453 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 12:13:16] 2025-12-15 11:12:45,453 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 12:13:16] 2025-12-15 11:12:45,454 | INFO     | did not find any defunct processes belonging to 7221
[2025-12-15 12:13:16] 2025-12-15 11:12:45,454 | INFO     | did not find any defunct processes belonging to 7221
[2025-12-15 12:13:16] 2025-12-15 11:12:45,455 | INFO     | ready for new job
[2025-12-15 12:13:16] 2025-12-15 11:12:45,455 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 12:13:16] 2025-12-15 11:12:45,456 | INFO     | ***************************************
[2025-12-15 12:13:16] 2025-12-15 11:12:45,456 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 12:13:16] 2025-12-15 11:12:45,456 | INFO     | ***************************************
[2025-12-15 12:13:16] 2025-12-15 11:12:45,456 | INFO     | 
[2025-12-15 12:13:16] 2025-12-15 11:12:45,456 | INFO     | pilot is running in a VM
[2025-12-15 12:13:16] 2025-12-15 11:12:45,456 | INFO     | architecture information:
[2025-12-15 12:13:16] 2025-12-15 11:12:45,456 | INFO     | executing command: cat /etc/os-release
[2025-12-15 12:13:16] 2025-12-15 11:12:45,465 | INFO     | cat /etc/os-release:
[2025-12-15 12:13:16] NAME="CentOS Linux"
[2025-12-15 12:13:16] VERSION="7 (Core)"
[2025-12-15 12:13:16] ID="centos"
[2025-12-15 12:13:16] ID_LIKE="rhel fedora"
[2025-12-15 12:13:16] VERSION_ID="7"
[2025-12-15 12:13:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 12:13:16] ANSI_COLOR="0;31"
[2025-12-15 12:13:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 12:13:16] HOME_URL="https://www.centos.org/"
[2025-12-15 12:13:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 12:13:16] 
[2025-12-15 12:13:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 12:13:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 12:13:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 12:13:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 12:13:16] 
[2025-12-15 12:13:16] 2025-12-15 11:12:45,465 | INFO     | ***************************************
[2025-12-15 12:13:16] 2025-12-15 11:12:45,967 | INFO     | executing command: df -mP /var/lib/boinc/slots/25
[2025-12-15 12:13:16] 2025-12-15 11:12:45,977 | INFO     | sufficient remaining disk space (498313723904 B)
[2025-12-15 12:13:16] 2025-12-15 11:12:45,977 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 12:13:16] 2025-12-15 11:12:45,977 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 12:13:16] 2025-12-15 11:12:45,977 | INFO     | update_server=False
[2025-12-15 12:13:16] 2025-12-15 11:12:45,977 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 12:13:16] 2025-12-15 11:12:45,977 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-15 12:13:16] 2025-12-15 11:12:45,977 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 12:13:16] 2025-12-15 11:12:45,977 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 12:13:16] 2025-12-15 11:12:45,977 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 12:13:16] 2025-12-15 11:12:45,978 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 12:13:16] 2025-12-15 11:12:45,978 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 12:13:16] 2025-12-15 11:12:45,978 | INFO     | aborting loop
[2025-12-15 12:13:16] 2025-12-15 11:12:46,099 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 12:13:16] 2025-12-15 11:12:46,499 | INFO     | all payload control threads have been joined
[2025-12-15 12:13:16] 2025-12-15 11:12:46,809 | INFO     | all job control threads have been joined
[2025-12-15 12:13:16] 2025-12-15 11:12:46,846 | INFO     | all data control threads have been joined
[2025-12-15 12:13:16] 2025-12-15 11:12:46,964 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 12:13:16] 2025-12-15 11:12:46,982 | INFO     | [job] queue monitor thread has finished
[2025-12-15 12:13:16] 2025-12-15 11:12:46,982 | INFO     | [job] retrieve thread has finished
[2025-12-15 12:13:16] 2025-12-15 11:12:46,983 | INFO     | [job] job monitor thread has finished
[2025-12-15 12:13:16] 2025-12-15 11:12:47,213 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 12:13:16] 2025-12-15 11:12:47,433 | INFO     | [job] validate thread has finished
[2025-12-15 12:13:16] 2025-12-15 11:12:47,504 | INFO     | [payload] control thread has finished
[2025-12-15 12:13:16] 2025-12-15 11:12:47,814 | INFO     | [job] control thread has finished
[2025-12-15 12:13:16] 2025-12-15 11:12:47,851 | INFO     | [data] control thread has finished
[2025-12-15 12:13:16] 2025-12-15 11:12:47,960 | INFO     | [payload] validate_post thread has finished
[2025-12-15 12:13:16] 2025-12-15 11:12:47,967 | INFO     | [payload] failed_post thread has finished
[2025-12-15 12:13:16] 2025-12-15 11:12:48,045 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 12:13:16] 2025-12-15 11:12:48,103 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 12:13:16] 2025-12-15 11:12:48,105 | INFO     | [data] copytool_out thread has finished
[2025-12-15 12:13:16] 2025-12-15 11:12:48,150 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 12:13:16] 2025-12-15 11:12:48,442 | INFO     | [data] copytool_in thread has finished
[2025-12-15 12:13:16] 2025-12-15 11:12:50,970 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 12:13:16] 2025-12-15 11:13:10,182 | INFO     | [monitor] cgroup control has ended
[2025-12-15 12:13:16] 2025-12-15 11:13:10,930 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139859092064064)>', '<ExcThread(monitor, started 139858790033152)>']
[2025-12-15 12:13:16] 2025-12-15 11:13:11,104 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 12:13:16] 2025-12-15 11:13:11,105 | INFO     | [monitor] control thread has ended
[2025-12-15 12:13:16] 2025-12-15 11:13:15,930 | INFO     | all workflow threads have been joined
[2025-12-15 12:13:16] 2025-12-15 11:13:15,931 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 12:13:16] 2025-12-15 11:13:15,931 | INFO     | traces error code: 0
[2025-12-15 12:13:16] 2025-12-15 11:13:15,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 12:13:16] 2025-12-15 11:13:15,993 [wrapper] ==== pilot stdout END ====
[2025-12-15 12:13:16] 2025-12-15 11:13:15,995 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 12:13:16] 2025-12-15 11:13:15,997 [wrapper] pilotpid: 667
[2025-12-15 12:13:16] 2025-12-15 11:13:15,999 [wrapper] Pilot exit status: 0
[2025-12-15 12:13:16] 2025-12-15 11:13:16,006 [wrapper] pandaids: 6929464672
[2025-12-15 12:13:16] 2025-12-15 11:13:16,020 [wrapper] cleanup supervisor_pilot 10356 668
[2025-12-15 12:13:16] 2025-12-15 11:13:16,022 [wrapper] Test setup, not cleaning
[2025-12-15 12:13:16] 2025-12-15 11:13:16,024 [wrapper] apfmon messages muted
[2025-12-15 12:13:16] 2025-12-15 11:13:16,025 [wrapper] ==== wrapper stdout END ====
[2025-12-15 12:13:16] 2025-12-15 11:13:16,027 [wrapper] ==== wrapper stderr END ====
[2025-12-15 12:13:16]  *** Error codes and diagnostics ***
[2025-12-15 12:13:16]     "exeErrorCode": 0,
[2025-12-15 12:13:16]     "exeErrorDiag": "",
[2025-12-15 12:13:16]     "pilotErrorCode": 0,
[2025-12-15 12:13:16]     "pilotErrorDiag": "",
[2025-12-15 12:13:16]  *** Listing of results directory ***
[2025-12-15 12:13:16] total 437888
[2025-12-15 12:13:16] -rw-r--r--. 1 boinc boinc    579449 Dec 14 15:14 pilot3.tar.gz
[2025-12-15 12:13:16] -rwx------. 1 boinc boinc     36322 Dec 14 15:19 runpilot2-wrapper.sh
[2025-12-15 12:13:16] -rw-r--r--. 1 boinc boinc      5112 Dec 14 15:22 queuedata.json
[2025-12-15 12:13:16] -rw-r--r--. 1 boinc boinc       100 Dec 15 08:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 12:13:16] -rwxr-xr-x. 1 boinc boinc      7986 Dec 15 08:28 run_atlas
[2025-12-15 12:13:16] -rw-r--r--. 1 boinc boinc       105 Dec 15 08:28 job.xml
[2025-12-15 12:13:16] -rw-r--r--. 1 boinc boinc      6393 Dec 15 08:28 init_data.xml
[2025-12-15 12:13:16] -rw-r--r--. 2 boinc boinc 225406532 Dec 15 08:28 EVNT.47898761._000494.pool.root.1
[2025-12-15 12:13:16] -rw-r--r--. 2 boinc boinc     15847 Dec 15 08:28 start_atlas.sh
[2025-12-15 12:13:16] drwxrwx--x. 2 boinc boinc        68 Dec 15 08:28 shared
[2025-12-15 12:13:16] -rw-r--r--. 2 boinc boinc    592400 Dec 15 08:28 input.tar.gz
[2025-12-15 12:13:16] -rw-r--r--. 1 boinc boinc         0 Dec 15 08:28 boinc_lockfile
[2025-12-15 12:13:16] -rw-r--r--. 1 boinc boinc      2506 Dec 15 08:28 pandaJob.out
[2025-12-15 12:13:16] -rw-------. 1 boinc boinc    991016 Dec 15 08:29 agis_schedconf.cvmfs.json
[2025-12-15 12:13:16] drwx------. 5 boinc boinc      4096 Dec 15 08:29 pilot3
[2025-12-15 12:13:16] -rw-------. 1 boinc boinc 216288492 Dec 15 12:00 HITS.47898763._011101.pool.root.1
[2025-12-15 12:13:16] -rw-r--r--. 1 boinc boinc       531 Dec 15 12:00 boinc_task_state.xml
[2025-12-15 12:13:16] -rw-------. 1 boinc boinc      1019 Dec 15 12:00 memory_monitor_summary.json
[2025-12-15 12:13:16] -rw-------. 1 boinc boinc         0 Dec 15 12:02 agis_ddmendpoints.agis.ALL.json
[2025-12-15 12:13:16] -rw-------. 1 boinc boinc    448440 Dec 15 12:10 log.47898763._011101.job.log.tgz.1
[2025-12-15 12:13:16] -rw-------. 1 boinc boinc        95 Dec 15 12:11 pilot_heartbeat.json
[2025-12-15 12:13:16] -rw-------. 1 boinc boinc      7783 Dec 15 12:12 heartbeat.json
[2025-12-15 12:13:16] -rw-r--r--. 1 boinc boinc      8192 Dec 15 12:12 boinc_mmap_file
[2025-12-15 12:13:16] -rw-r--r--. 1 boinc boinc        28 Dec 15 12:12 wrapper_checkpoint.txt
[2025-12-15 12:13:16] -rw-------. 1 boinc boinc      4616 Dec 15 12:13 pilotlog.txt
[2025-12-15 12:13:16] -rw-------. 1 boinc boinc   1712699 Dec 15 12:13 log.47898763._011101.job.log.1
[2025-12-15 12:13:16] -rw-------. 1 boinc boinc       357 Dec 15 12:13 output.list
[2025-12-15 12:13:16] -rw-r--r--. 1 boinc boinc       620 Dec 15 12:13 runtime_log
[2025-12-15 12:13:16] -rw-------. 1 boinc boinc   2181120 Dec 15 12:13 result.tar.gz
[2025-12-15 12:13:16] -rw-r--r--. 1 boinc boinc      8833 Dec 15 12:13 runtime_log.err
[2025-12-15 12:13:16] -rw-------. 1 boinc boinc       656 Dec 15 12:13 9NSKDmU71o8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSoVKDmRdsnbm.diag
[2025-12-15 12:13:16] -rw-r--r--. 1 boinc boinc     20908 Dec 15 12:13 stderr.txt
[2025-12-15 12:13:16] HITS file was successfully produced:
[2025-12-15 12:13:16] -rw-------. 1 boinc boinc 216288492 Dec 15 12:00 shared/HITS.pool.root.1
[2025-12-15 12:13:16]  *** Contents of shared directory: ***
[2025-12-15 12:13:16] total 434072
[2025-12-15 12:13:16] -rw-r--r--. 2 boinc boinc 225406532 Dec 15 08:28 ATLAS.root_0
[2025-12-15 12:13:16] -rw-r--r--. 2 boinc boinc     15847 Dec 15 08:28 start_atlas.sh
[2025-12-15 12:13:16] -rw-r--r--. 2 boinc boinc    592400 Dec 15 08:28 input.tar.gz
[2025-12-15 12:13:16] -rw-------. 1 boinc boinc 216288492 Dec 15 12:00 HITS.pool.root.1
[2025-12-15 12:13:16] -rw-------. 1 boinc boinc   2181120 Dec 15 12:13 result.tar.gz
12:13:17 (29272): run_atlas exited; CPU time 64261.207214
12:13:17 (29272): called boinc_finish(0)

</stderr_txt>
]]>

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