Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:09:12 (3816174): wrapper (7.7.26015): starting
11:09:12 (3816174): wrapper: running run_atlas (--nthreads 3)
[2025-12-15 11:09:12] Arguments: --nthreads 3
[2025-12-15 11:09:12] Threads: 3
[2025-12-15 11:09:12] Checking for CVMFS
[2025-12-15 11:09:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 11:09:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 11:09:13] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 11:09:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 11:09:13] 2.9.2.0 3086822 3006 84264 154027 3 57 36849746 36864001 0 130560 0 1940867 99.989 106448 19301 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-15 11:09:13] CVMFS is ok
[2025-12-15 11:09:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 11:09:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 11:09:13] Further information can be found at the LHC@home message board.
[2025-12-15 11:09:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 11:09:13] Checking for apptainer binary...
[2025-12-15 11:09:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 11:09:13] Running /usr/bin/apptainer --version
[2025-12-15 11:09:13] apptainer version 1.4.1-1.1
[2025-12-15 11:09:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 11:09:13] thA327
[2025-12-15 11:09:13] apptainer works
[2025-12-15 11:09:13] Set ATHENA_PROC_NUMBER=3
[2025-12-15 11:09:13] Set ATHENA_CORE_NUMBER=3
[2025-12-15 11:09:13] Starting ATLAS job with PandaID=6929438372
[2025-12-15 11:09:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 13:04:50]  *** The last 200 lines of the pilot log: ***
[2025-12-15 13:04:50] 2025-12-15 12:04:22,228 | INFO     | [data] copytool_in thread has finished
[2025-12-15 13:04:50] 2025-12-15 12:04:22,638 | INFO     | [data] copytool_out thread has finished
[2025-12-15 13:04:50] 2025-12-15 12:04:22,657 | INFO     | [data] control thread has finished
[2025-12-15 13:04:50] 2025-12-15 12:04:22,735 | INFO     | [payload] control thread has finished
[2025-12-15 13:04:50] 2025-12-15 12:04:22,751 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 13:04:50] 2025-12-15 12:04:22,788 | INFO     | [job] validate thread has finished
[2025-12-15 13:04:50] 2025-12-15 12:04:22,791 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 13:04:50] 2025-12-15 12:04:22,868 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 13:04:50] 2025-12-15 12:04:23,038 | INFO     | [job] control thread has finished
[2025-12-15 13:04:50] 2025-12-15 12:04:24,753 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 13:04:50] 2025-12-15 12:04:26,321 | INFO     | [monitor] cgroup control has ended
[2025-12-15 13:04:50] 2025-12-15 12:04:27,629 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140119093806912)>', '<ExcThread(monitor, started 140118476191488)>']
[2025-12-15 13:04:50] 2025-12-15 12:04:32,655 | INFO     | all workflow threads have been joined
[2025-12-15 13:04:50] 2025-12-15 12:04:32,655 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 13:04:50] 2025-12-15 12:04:32,655 | INFO     | traces error code: 0
[2025-12-15 13:04:50] 2025-12-15 12:04:32,655 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 13:04:50] 2025-12-15 12:04:50,229 | INFO     | PID=3819895 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-15 13:04:50] 2025-12-15 12:04:50,230 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 13:04:50] 2025-12-15 12:04:50,230 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 13:04:50] 2025-12-15 12:04:50,230 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 13:04:50] 2025-12-15 12:04:50,230 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 13:04:50] 2025-12-15 12:04:50,230 | INFO     | [monitor] control thread has ended
[2025-12-15 13:04:50] 2025-12-15 12:04:50,276 [wrapper] ==== pilot stdout END ====
[2025-12-15 13:04:50] 2025-12-15 12:04:50,278 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 13:04:50] 2025-12-15 12:04:50,281 [wrapper] pilotpid: 3819895
[2025-12-15 13:04:50] 2025-12-15 12:04:50,283 [wrapper] Pilot exit status: 0
[2025-12-15 13:04:50] 2025-12-15 12:04:50,290 [wrapper] pandaids: 6929438372
[2025-12-15 13:04:50] 2025-12-15 12:04:50,306 [wrapper] cleanup supervisor_pilot 3840665 3819896
[2025-12-15 13:04:50] 2025-12-15 12:04:50,308 [wrapper] Test setup, not cleaning
[2025-12-15 13:04:50] 2025-12-15 12:04:50,310 [wrapper] apfmon messages muted
[2025-12-15 13:04:50] 2025-12-15 12:04:50,313 [wrapper] ==== wrapper stdout END ====
[2025-12-15 13:04:50] 2025-12-15 12:04:50,315 [wrapper] ==== wrapper stderr END ====
[2025-12-15 13:04:50]  *** Error codes and diagnostics ***
[2025-12-15 13:04:50]     "exeErrorCode": 0,
[2025-12-15 13:04:50]     "exeErrorDiag": "",
[2025-12-15 13:04:50]     "pilotErrorCode": 0,
[2025-12-15 13:04:50]     "pilotErrorDiag": "",
[2025-12-15 13:04:50]  *** Listing of results directory ***
[2025-12-15 13:04:50] total 442128
[2025-12-15 13:04:50] -rw-r--r-- 1 boinc boinc      5112 Dec 14 09:33 queuedata.json
[2025-12-15 13:04:50] -rw-r--r-- 1 boinc boinc    579449 Dec 14 09:33 pilot3.tar.gz
[2025-12-15 13:04:50] -rwx------ 1 boinc boinc     36322 Dec 14 09:34 runpilot2-wrapper.sh
[2025-12-15 13:04:50] -rw-r--r-- 1 boinc boinc       100 Dec 15 11:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 13:04:50] -rwxr-xr-x 1 boinc boinc      7986 Dec 15 11:09 run_atlas
[2025-12-15 13:04:50] -rw-r--r-- 1 boinc boinc       105 Dec 15 11:09 job.xml
[2025-12-15 13:04:50] -rw-r--r-- 2 boinc boinc 223024639 Dec 15 11:09 EVNT.47898761._000402.pool.root.1
[2025-12-15 13:04:50] -rw-r--r-- 2 boinc boinc    592389 Dec 15 11:09 input.tar.gz
[2025-12-15 13:04:50] -rw-r--r-- 2 boinc boinc     15847 Dec 15 11:09 start_atlas.sh
[2025-12-15 13:04:50] drwxrwx--x 2 boinc boinc      4096 Dec 15 11:09 shared
[2025-12-15 13:04:50] -rw-r--r-- 1 boinc boinc         0 Dec 15 11:09 boinc_setup_complete
[2025-12-15 13:04:50] -rw-r--r-- 1 boinc boinc      6446 Dec 15 11:09 init_data.xml
[2025-12-15 13:04:50] -rw-r--r-- 1 boinc boinc         0 Dec 15 11:09 boinc_lockfile
[2025-12-15 13:04:50] -rw-r--r-- 1 boinc boinc      2506 Dec 15 11:09 pandaJob.out
[2025-12-15 13:04:50] -rw------- 1 boinc boinc    991004 Dec 15 11:09 agis_schedconf.cvmfs.json
[2025-12-15 13:04:50] -rw------- 1 boinc boinc   1516240 Dec 15 11:09 agis_ddmendpoints.agis.ALL.json
[2025-12-15 13:04:50] drwx------ 5 boinc boinc      4096 Dec 15 11:09 pilot3
[2025-12-15 13:04:50] -rw------- 1 boinc boinc        95 Dec 15 13:03 pilot_heartbeat.json
[2025-12-15 13:04:50] -rw------- 1 boinc boinc 223281128 Dec 15 13:03 HITS.47898763._010032.pool.root.1
[2025-12-15 13:04:50] -rw-r--r-- 1 boinc boinc       529 Dec 15 13:04 boinc_task_state.xml
[2025-12-15 13:04:50] -rw------- 1 boinc boinc      1014 Dec 15 13:04 memory_monitor_summary.json
[2025-12-15 13:04:50] -rw------- 1 boinc boinc    272361 Dec 15 13:04 log.47898763._010032.job.log.tgz.1
[2025-12-15 13:04:50] -rw------- 1 boinc boinc      7740 Dec 15 13:04 heartbeat.json
[2025-12-15 13:04:50] -rw-r--r-- 1 boinc boinc        27 Dec 15 13:04 wrapper_checkpoint.txt
[2025-12-15 13:04:50] -rw-r--r-- 1 boinc boinc      8192 Dec 15 13:04 boinc_mmap_file
[2025-12-15 13:04:50] -rw------- 1 boinc boinc       747 Dec 15 13:04 pilotlog.txt
[2025-12-15 13:04:50] -rw------- 1 boinc boinc    995930 Dec 15 13:04 log.47898763._010032.job.log.1
[2025-12-15 13:04:50] -rw------- 1 boinc boinc       357 Dec 15 13:04 output.list
[2025-12-15 13:04:50] -rw-r--r-- 1 boinc boinc       620 Dec 15 13:04 runtime_log
[2025-12-15 13:04:50] -rw------- 1 boinc boinc   1290240 Dec 15 13:04 result.tar.gz
[2025-12-15 13:04:50] -rw-r--r-- 1 boinc boinc      8897 Dec 15 13:04 runtime_log.err
[2025-12-15 13:04:50] -rw------- 1 boinc boinc       659 Dec 15 13:04 42oLDmbjwo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6yQKDmvk1Lpm.diag
[2025-12-15 13:04:50] -rw-r--r-- 1 boinc boinc      5701 Dec 15 13:04 stderr.txt
[2025-12-15 13:04:50] HITS file was successfully produced:
[2025-12-15 13:04:50] -rw------- 1 boinc boinc 223281128 Dec 15 13:03 shared/HITS.pool.root.1
[2025-12-15 13:04:50]  *** Contents of shared directory: ***
[2025-12-15 13:04:50] total 437712
[2025-12-15 13:04:50] -rw-r--r-- 2 boinc boinc 223024639 Dec 15 11:09 ATLAS.root_0
[2025-12-15 13:04:50] -rw-r--r-- 2 boinc boinc    592389 Dec 15 11:09 input.tar.gz
[2025-12-15 13:04:50] -rw-r--r-- 2 boinc boinc     15847 Dec 15 11:09 start_atlas.sh
[2025-12-15 13:04:50] -rw------- 1 boinc boinc 223281128 Dec 15 13:03 HITS.pool.root.1
[2025-12-15 13:04:50] -rw------- 1 boinc boinc   1290240 Dec 15 13:04 result.tar.gz
13:04:52 (3816174): run_atlas exited; CPU time 19915.138381
13:04:52 (3816174): called boinc_finish(0)

</stderr_txt>
]]>

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