Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:46:33 (3282382): wrapper (7.7.26015): starting
11:46:33 (3282382): wrapper: running run_atlas (--nthreads 12)
[2025-12-15 11:46:33] Arguments: --nthreads 12
[2025-12-15 11:46:33] Threads: 12
[2025-12-15 11:46:33] Checking for CVMFS
[2025-12-15 11:46:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 11:46:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 11:46:33] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 11:46:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 11:46:33] 2.13.3.0 1314509 3268 209740 154029 1 249 27021026 46080001 32950 130560 0 20244578 99.746 13257578 26370 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-12-15 11:46:33] CVMFS is ok
[2025-12-15 11:46:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 11:46:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 11:46:33] Further information can be found at the LHC@home message board.
[2025-12-15 11:46:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 11:46:33] Checking for apptainer binary...
[2025-12-15 11:46:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 11:46:33] Running /usr/bin/apptainer --version
[2025-12-15 11:46:33] apptainer version 1.4.4-1.el9
[2025-12-15 11:46:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 11:46:34] mff2103.farm.particle.cz
[2025-12-15 11:46:34] apptainer works
[2025-12-15 11:46:34] Set ATHENA_PROC_NUMBER=12
[2025-12-15 11:46:34] Set ATHENA_CORE_NUMBER=12
[2025-12-15 11:46:34] Starting ATLAS job with PandaID=6929438998
[2025-12-15 11:46:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 13:22:24]  *** The last 200 lines of the pilot log: ***
[2025-12-15 13:22:24] 2025-12-15 12:21:07,181 | INFO     | summary of transferred files:
[2025-12-15 13:22:24] 2025-12-15 12:21:07,181 | INFO     |  -- lfn=log.47898763._010300.job.log.tgz.1, status_code=0, status=transferred
[2025-12-15 13:22:24] 2025-12-15 12:21:07,181 | INFO     | stage-out finished correctly
[2025-12-15 13:22:24] 2025-12-15 12:21:07,376 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-15 13:22:24] 2025-12-15 12:21:08,638 | INFO     | time since job start (5661s) is within the limit (174528.0s)
[2025-12-15 13:22:24] 2025-12-15 12:21:10,066 | INFO     | job 6929438998 has state=finished
[2025-12-15 13:22:24] 2025-12-15 12:21:10,066 | INFO     | preparing for final server update for job 6929438998 in state='finished'
[2025-12-15 13:22:24] 2025-12-15 12:21:10,067 | INFO     | this job has now completed (state=finished)
[2025-12-15 13:22:24] 2025-12-15 12:21:10,067 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-15 13:22:24] 2025-12-15 12:21:10,067 | INFO     | log transfer has been attempted: DONE
[2025-12-15 13:22:24] 2025-12-15 12:21:10,067 | INFO     | job 6929438998 has finished - writing final server update
[2025-12-15 13:22:24] 2025-12-15 12:21:10,067 | INFO     | total number of processed events: 400 (read)
[2025-12-15 13:22:24] 2025-12-15 12:21:10,068 | INFO     | executing command: lscpu
[2025-12-15 13:22:24] 2025-12-15 12:21:10,145 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-15 13:22:24] 2025-12-15 12:21:10,648 | INFO     | time since job start (5663s) is within the limit (174528.0s)
[2025-12-15 13:22:24] 2025-12-15 12:21:11,174 | WARNING  | process 3332850 can no longer be monitored (due to stat problems) - aborting
[2025-12-15 13:22:24] 2025-12-15 12:21:11,174 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-6929438998/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 13:22:24] 2025-12-15 12:21:11,732 | INFO     | number of running child processes to parent process 3332850: 1
[2025-12-15 13:22:24] 2025-12-15 12:21:11,732 | INFO     | maximum number of monitored processes: 6
[2025-12-15 13:22:24] 2025-12-15 12:21:12,338 | INFO     | PID=3303825 has CPU usage=16.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-15 13:22:24] 2025-12-15 12:21:12,338 | INFO     | .. there are 51 such processes running
[2025-12-15 13:22:24] 2025-12-15 12:21:13,341 | INFO     | time since job start (5666s) is within the limit (174528.0s)
[2025-12-15 13:22:24] 2025-12-15 12:21:14,239 | INFO     | monitor loop #380: job 0:6929438998 is in state 'finished'
[2025-12-15 13:22:24] 2025-12-15 12:21:14,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 13:22:24] 2025-12-15 12:21:15,347 | INFO     | time since job start (5668s) is within the limit (174528.0s)
[2025-12-15 13:22:24] 2025-12-15 12:21:16,744 | INFO     | monitor loop #381: job 0:6929438998 is in state 'finished'
[2025-12-15 13:22:24] 2025-12-15 12:21:16,745 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 13:22:24] 2025-12-15 12:21:17,358 | INFO     | time since job start (5670s) is within the limit (174528.0s)
[2025-12-15 13:22:24] 2025-12-15 12:21:19,249 | INFO     | monitor loop #382: job 0:6929438998 is in state 'finished'
[2025-12-15 13:22:24] 2025-12-15 12:21:19,250 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 13:22:24] 2025-12-15 12:21:19,364 | INFO     | time since job start (5672s) is within the limit (174528.0s)
[2025-12-15 13:22:24] 2025-12-15 12:21:21,373 | INFO     | time since job start (5674s) is within the limit (174528.0s)
[2025-12-15 13:22:24] 2025-12-15 12:21:21,754 | INFO     | monitor loop #383: job 0:6929438998 is in state 'finished'
[2025-12-15 13:22:24] 2025-12-15 12:21:21,754 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 13:22:24] 2025-12-15 12:21:23,379 | INFO     | time since job start (5676s) is within the limit (174528.0s)
[2025-12-15 13:22:24] 2025-12-15 12:21:23,722 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-15 13:22:24] 2025-12-15 12:21:23,740 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2799.625364583333
[2025-12-15 13:22:24] 2025-12-15 12:21:23,757 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-6929438998/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 13:22:24] 2025-12-15 12:21:23,757 | INFO     | extracted standard info from prmon json
[2025-12-15 13:22:24] 2025-12-15 12:21:23,757 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 13:22:24] 2025-12-15 12:21:23,757 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 13:22:24] 2025-12-15 12:21:23,758 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 13:22:24] 2025-12-15 12:21:23,758 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 13:22:24] 2025-12-15 12:21:23,760 | INFO     | fitting pss+swap vs Time
[2025-12-15 13:22:24] 2025-12-15 12:21:23,765 | INFO     | sum of square deviations: 197185592.8837212
[2025-12-15 13:22:24] 2025-12-15 12:21:23,766 | INFO     | sum of deviations: 1019454556.0697676
[2025-12-15 13:22:24] 2025-12-15 12:21:23,767 | INFO     | mean x: 1765798537.6744187
[2025-12-15 13:22:24] 2025-12-15 12:21:23,767 | INFO     | mean y: 2683170.395348837
[2025-12-15 13:22:24] 2025-12-15 12:21:23,767 | INFO     | intersect: -9126540410.330725
[2025-12-15 13:22:24] 2025-12-15 12:21:23,767 | INFO     | chi2: 0.003304824192303261
[2025-12-15 13:22:24] 2025-12-15 12:21:23,767 | INFO     | current memory leak: 5.17 B/s (using 86 data points, chi2=0.00)
[2025-12-15 13:22:24] 2025-12-15 12:21:23,768 | INFO     | could have reported an average CPU frequency of 2819 MHz (7 samples)
[2025-12-15 13:22:24] 2025-12-15 12:21:23,768 | INFO     | ..............................
[2025-12-15 13:22:24] 2025-12-15 12:21:23,768 | INFO     | . Timing measurements:
[2025-12-15 13:22:24] 2025-12-15 12:21:23,768 | INFO     | . get job = 0 s
[2025-12-15 13:22:24] 2025-12-15 12:21:23,768 | INFO     | . initial setup = 1 s
[2025-12-15 13:22:24] 2025-12-15 12:21:23,768 | INFO     | . payload setup = 7 s
[2025-12-15 13:22:24] 2025-12-15 12:21:23,768 | INFO     | . stage-in = 0 s
[2025-12-15 13:22:24] 2025-12-15 12:21:23,769 | INFO     | . payload execution = 5630 s
[2025-12-15 13:22:24] 2025-12-15 12:21:23,769 | INFO     | . stage-out = 1 s
[2025-12-15 13:22:24] 2025-12-15 12:21:23,769 | INFO     | . log creation = 0 s
[2025-12-15 13:22:24] 2025-12-15 12:21:23,769 | INFO     | ..............................
[2025-12-15 13:22:24] 2025-12-15 12:21:23,877 | INFO     | 
[2025-12-15 13:22:24] 2025-12-15 12:21:23,878 | INFO     | job summary report
[2025-12-15 13:22:24] 2025-12-15 12:21:23,878 | INFO     | --------------------------------------------------
[2025-12-15 13:22:24] 2025-12-15 12:21:23,878 | INFO     | PanDA job id: 6929438998
[2025-12-15 13:22:24] 2025-12-15 12:21:23,878 | INFO     | task id: 47898763
[2025-12-15 13:22:24] 2025-12-15 12:21:23,878 | INFO     | errors: (none)
[2025-12-15 13:22:24] 2025-12-15 12:21:23,878 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 13:22:24] 2025-12-15 12:21:23,878 | INFO     | pilot state: finished 
[2025-12-15 13:22:24] 2025-12-15 12:21:23,878 | INFO     | transexitcode: 0
[2025-12-15 13:22:24] 2025-12-15 12:21:23,878 | INFO     | exeerrorcode: 0
[2025-12-15 13:22:24] 2025-12-15 12:21:23,878 | INFO     | exeerrordiag: 
[2025-12-15 13:22:24] 2025-12-15 12:21:23,878 | INFO     | exitcode: 0
[2025-12-15 13:22:24] 2025-12-15 12:21:23,878 | INFO     | exitmsg: OK
[2025-12-15 13:22:24] 2025-12-15 12:21:23,878 | INFO     | cpuconsumptiontime: 53167 s
[2025-12-15 13:22:24] 2025-12-15 12:21:23,879 | INFO     | nevents: 400
[2025-12-15 13:22:24] 2025-12-15 12:21:23,879 | INFO     | neventsw: 0
[2025-12-15 13:22:24] 2025-12-15 12:21:23,879 | INFO     | pid: 3332850
[2025-12-15 13:22:24] 2025-12-15 12:21:23,879 | INFO     | pgrp: 3332850
[2025-12-15 13:22:24] 2025-12-15 12:21:23,879 | INFO     | corecount: 12
[2025-12-15 13:22:24] 2025-12-15 12:21:23,879 | INFO     | event service: False
[2025-12-15 13:22:24] 2025-12-15 12:21:23,879 | INFO     | sizes: {0: 2283730, 1: 2283985, 8: 2284247, 12: 2284275, 5641: 2311004, 5642: 2320004, 5643: 2320188, 5659: 2320382}
[2025-12-15 13:22:24] 2025-12-15 12:21:23,879 | INFO     | --------------------------------------------------
[2025-12-15 13:22:24] 2025-12-15 12:21:23,879 | INFO     | 
[2025-12-15 13:22:24] 2025-12-15 12:21:23,879 | INFO     | executing command: ls -lF /scratch/.boinc/slots/3
[2025-12-15 13:22:24] 2025-12-15 12:21:23,902 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 13:22:24] 2025-12-15 12:21:23,903 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 13:22:24] 2025-12-15 12:21:23,903 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 13:22:24] 2025-12-15 12:21:23,903 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 13:22:24] 2025-12-15 12:21:23,903 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 13:22:24] 2025-12-15 12:21:23,903 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 13:22:24] 2025-12-15 12:21:23,903 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 13:22:24] 2025-12-15 12:21:23,903 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 13:22:24] 2025-12-15 12:21:23,903 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 13:22:24] 2025-12-15 12:21:23,903 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 13:22:24] 2025-12-15 12:21:23,903 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 13:22:24] 2025-12-15 12:21:23,903 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 13:22:24] 2025-12-15 12:21:23,904 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 13:22:24] 2025-12-15 12:21:23,904 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 13:22:24] 2025-12-15 12:21:23,904 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 13:22:24] 2025-12-15 12:21:23,904 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 13:22:24] 2025-12-15 12:21:23,904 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 13:22:24] 2025-12-15 12:21:23,904 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 13:22:24] 2025-12-15 12:21:23,904 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 13:22:24] 2025-12-15 12:21:23,904 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 13:22:24] 2025-12-15 12:21:23,904 | INFO     | job 6929438998 has completed (purged errors)
[2025-12-15 13:22:24] 2025-12-15 12:21:23,904 | INFO     | overall cleanup function is called
[2025-12-15 13:22:24] 2025-12-15 12:21:24,914 | INFO     | --- collectZombieJob: --- 10, [3332850]
[2025-12-15 13:22:24] 2025-12-15 12:21:24,915 | INFO     | zombie collector waiting for pid 3332850
[2025-12-15 13:22:24] 2025-12-15 12:21:24,915 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 13:22:24] 2025-12-15 12:21:24,915 | INFO     | collected zombie processes
[2025-12-15 13:22:24] 2025-12-15 12:21:24,915 | INFO     | will attempt to kill all subprocesses of pid=3332850
[2025-12-15 13:22:24] 2025-12-15 12:21:25,644 | INFO     | process IDs to be killed: [3332850] (in reverse order)
[2025-12-15 13:22:24] 2025-12-15 12:21:25,921 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 13:22:24] 2025-12-15 12:21:25,921 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 13:22:24] 2025-12-15 12:21:25,943 | INFO     | did not find any defunct processes belonging to 3332850
[2025-12-15 13:22:24] 2025-12-15 12:21:25,973 | INFO     | did not find any defunct processes belonging to 3332850
[2025-12-15 13:22:24] 2025-12-15 12:21:25,974 | INFO     | ready for new job
[2025-12-15 13:22:24] 2025-12-15 12:21:25,974 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 13:22:24] 2025-12-15 12:21:25,975 | INFO     | ***************************************
[2025-12-15 13:22:24] 2025-12-15 12:21:25,976 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 13:22:24] 2025-12-15 12:21:25,976 | INFO     | ***************************************
[2025-12-15 13:22:24] 2025-12-15 12:21:25,976 | INFO     | 
[2025-12-15 13:22:24] 2025-12-15 12:21:25,990 | INFO     | architecture information:
[2025-12-15 13:22:24] 2025-12-15 12:21:25,990 | INFO     | executing command: cat /etc/os-release
[2025-12-15 13:22:24] 2025-12-15 12:21:26,056 | INFO     | cat /etc/os-release:
[2025-12-15 13:22:24] NAME="CentOS Linux"
[2025-12-15 13:22:24] VERSION="7 (Core)"
[2025-12-15 13:22:24] ID="centos"
[2025-12-15 13:22:24] ID_LIKE="rhel fedora"
[2025-12-15 13:22:24] VERSION_ID="7"
[2025-12-15 13:22:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 13:22:24] ANSI_COLOR="0;31"
[2025-12-15 13:22:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 13:22:24] HOME_URL="https://www.centos.org/"
[2025-12-15 13:22:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 13:22:24] 
[2025-12-15 13:22:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 13:22:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 13:22:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 13:22:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 13:22:24] 
[2025-12-15 13:22:24] 2025-12-15 12:21:26,056 | INFO     | ***************************************
[2025-12-15 13:22:24] 2025-12-15 12:21:26,559 | INFO     | executing command: df -mP /scratch/.boinc/slots/3
[2025-12-15 13:22:24] 2025-12-15 12:21:26,636 | INFO     | sufficient remaining disk space (1575632240640 B)
[2025-12-15 13:22:24] 2025-12-15 12:21:26,637 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 13:22:24] 2025-12-15 12:21:26,637 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 13:22:24] 2025-12-15 12:21:26,637 | INFO     | update_server=False
[2025-12-15 13:22:24] 2025-12-15 12:21:26,637 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 13:22:24] 2025-12-15 12:21:26,768 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-15 13:22:24] 2025-12-15 12:21:26,769 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-15 13:22:24] 2025-12-15 12:21:26,769 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 13:22:24] 2025-12-15 12:21:26,769 | INFO     | will abort loop
[2025-12-15 13:22:24] 2025-12-15 12:21:27,090 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 13:22:24] 2025-12-15 12:21:27,108 | INFO     | all data control threads have been joined
[2025-12-15 13:22:24] 2025-12-15 12:21:27,150 | INFO     | all job control threads have been joined
[2025-12-15 13:22:24] 2025-12-15 12:21:27,642 | INFO     | [job] retrieve thread has finished
[2025-12-15 13:22:24] 2025-12-15 12:21:27,763 | INFO     | [payload] failed_post thread has finished
[2025-12-15 13:22:24] 2025-12-15 12:21:27,774 | INFO     | [job] job monitor thread has finished
[2025-12-15 13:22:24] 2025-12-15 12:21:27,854 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 13:22:24] 2025-12-15 12:21:27,858 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 13:22:24] 2025-12-15 12:21:27,880 | INFO     | all payload control threads have been joined
[2025-12-15 13:22:24] 2025-12-15 12:21:28,011 | INFO     | [payload] validate_post thread has finished
[2025-12-15 13:22:24] 2025-12-15 12:21:28,097 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 13:22:24] 2025-12-15 12:21:28,119 | INFO     | [data] control thread has finished
[2025-12-15 13:22:24] 2025-12-15 12:21:28,156 | INFO     | [job] control thread has finished
[2025-12-15 13:22:24] 2025-12-15 12:21:28,390 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 13:22:24] 2025-12-15 12:21:28,823 | INFO     | [data] copytool_in thread has finished
[2025-12-15 13:22:24] 2025-12-15 12:21:28,824 | INFO     | [job] validate thread has finished
[2025-12-15 13:22:24] 2025-12-15 12:21:28,886 | INFO     | [payload] control thread has finished
[2025-12-15 13:22:24] 2025-12-15 12:21:28,891 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 13:22:24] 2025-12-15 12:21:29,863 | INFO     | [data] copytool_out thread has finished
[2025-12-15 13:22:24] 2025-12-15 12:21:29,897 | INFO     | [job] queue monitor thread has finished
[2025-12-15 13:22:24] 2025-12-15 12:21:31,100 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 13:22:24] 2025-12-15 12:21:37,225 | INFO     | job.realtimelogging is not enabled
[2025-12-15 13:22:24] 2025-12-15 12:21:38,231 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 13:22:24] 2025-12-15 12:21:56,364 | INFO     | [monitor] cgroup control has ended
[2025-12-15 13:22:24] 2025-12-15 12:21:57,491 | INFO     | PID=3303825 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-15 13:22:24] 2025-12-15 12:21:57,491 | INFO     | .. there are 51 such processes running
[2025-12-15 13:22:24] 2025-12-15 12:21:57,495 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 13:22:24] 2025-12-15 12:21:57,495 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 13:22:24] 2025-12-15 12:21:57,496 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 13:22:24] 2025-12-15 12:21:57,643 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140710413633344)>', '<ExcThread(monitor, started 140709973718784)>']
[2025-12-15 13:22:24] 2025-12-15 12:21:58,501 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 13:22:24] 2025-12-15 12:21:58,502 | INFO     | [monitor] control thread has ended
[2025-12-15 13:22:24] 2025-12-15 12:22:02,669 | INFO     | all workflow threads have been joined
[2025-12-15 13:22:24] 2025-12-15 12:22:02,670 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 13:22:24] 2025-12-15 12:22:02,670 | INFO     | traces error code: 0
[2025-12-15 13:22:24] 2025-12-15 12:22:02,670 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 13:22:24] 2025-12-15 12:22:02,855 [wrapper] ==== pilot stdout END ====
[2025-12-15 13:22:24] 2025-12-15 12:22:02,881 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 13:22:24] 2025-12-15 12:22:02,929 [wrapper] pilotpid: 3303825
[2025-12-15 13:22:24] 2025-12-15 12:22:02,936 [wrapper] Pilot exit status: 0
[2025-12-15 13:22:24] 2025-12-15 12:22:03,016 [wrapper] pandaids: 6929438998
[2025-12-15 13:22:24] 2025-12-15 12:22:03,294 [wrapper] cleanup supervisor_pilot 3671031 3303826
[2025-12-15 13:22:24] 2025-12-15 12:22:03,296 [wrapper] Test setup, not cleaning
[2025-12-15 13:22:24] 2025-12-15 12:22:03,299 [wrapper] apfmon messages muted
[2025-12-15 13:22:24] 2025-12-15 12:22:03,301 [wrapper] ==== wrapper stdout END ====
[2025-12-15 13:22:24] 2025-12-15 12:22:03,304 [wrapper] ==== wrapper stderr END ====
[2025-12-15 13:22:24]  *** Error codes and diagnostics ***
[2025-12-15 13:22:24]     "exeErrorCode": 0,
[2025-12-15 13:22:24]     "exeErrorDiag": "",
[2025-12-15 13:22:24]     "pilotErrorCode": 0,
[2025-12-15 13:22:24]     "pilotErrorDiag": "",
[2025-12-15 13:22:24]  *** Listing of results directory ***
[2025-12-15 13:22:24] total 441232
[2025-12-15 13:22:24] -rw-r--r-- 1 boinc boinc    579449 Dec 14 09:33 pilot3.tar.gz
[2025-12-15 13:22:24] -rwx------ 1 boinc boinc     36322 Dec 14 09:34 runpilot2-wrapper.sh
[2025-12-15 13:22:24] -rw-r--r-- 1 boinc boinc      5112 Dec 14 09:35 queuedata.json
[2025-12-15 13:22:24] -rw-r--r-- 1 boinc boinc       100 Dec 15 11:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 13:22:24] -rwxr-xr-x 1 boinc boinc      7986 Dec 15 11:46 run_atlas
[2025-12-15 13:22:24] -rw-r--r-- 1 boinc boinc       105 Dec 15 11:46 job.xml
[2025-12-15 13:22:24] -rw-r--r-- 1 boinc boinc      6675 Dec 15 11:46 init_data.xml
[2025-12-15 13:22:24] -rw-r--r-- 2 boinc boinc 223677942 Dec 15 11:46 EVNT.47898761._000437.pool.root.1
[2025-12-15 13:22:24] -rw-r--r-- 2 boinc boinc     15847 Dec 15 11:46 start_atlas.sh
[2025-12-15 13:22:24] drwxrwx--x 2 boinc boinc      4096 Dec 15 11:46 shared
[2025-12-15 13:22:24] -rw-r--r-- 2 boinc boinc    592393 Dec 15 11:46 input.tar.gz
[2025-12-15 13:22:24] -rw-r--r-- 1 boinc boinc         0 Dec 15 11:46 boinc_lockfile
[2025-12-15 13:22:24] -rw-r--r-- 1 boinc boinc      2506 Dec 15 11:46 pandaJob.out
[2025-12-15 13:22:24] -rw------- 1 boinc boinc    990996 Dec 15 11:46 agis_schedconf.cvmfs.json
[2025-12-15 13:22:24] -rw------- 1 boinc boinc   1516240 Dec 15 11:46 agis_ddmendpoints.agis.ALL.json
[2025-12-15 13:22:24] drwx------ 5 boinc boinc      4096 Dec 15 11:46 pilot3
[2025-12-15 13:22:24] -rw-r--r-- 1 boinc boinc       528 Dec 15 13:20 boinc_task_state.xml
[2025-12-15 13:22:24] -rw------- 1 boinc boinc 221807918 Dec 15 13:20 HITS.47898763._010300.pool.root.1
[2025-12-15 13:22:24] -rw------- 1 boinc boinc      1029 Dec 15 13:21 memory_monitor_summary.json
[2025-12-15 13:22:24] -rw------- 1 boinc boinc    414614 Dec 15 13:21 log.47898763._010300.job.log.tgz.1
[2025-12-15 13:22:24] -rw------- 1 boinc boinc      7785 Dec 15 13:21 heartbeat.json
[2025-12-15 13:22:24] -rw------- 1 boinc boinc        95 Dec 15 13:21 pilot_heartbeat.json
[2025-12-15 13:22:24] -rw------- 1 boinc boinc      5085 Dec 15 13:22 pilotlog.txt
[2025-12-15 13:22:24] -rw------- 1 boinc boinc    797459 Dec 15 13:22 log.47898763._010300.job.log.1
[2025-12-15 13:22:24] -rw------- 1 boinc boinc       357 Dec 15 13:22 output.list
[2025-12-15 13:22:24] -rw-r--r-- 1 boinc boinc       620 Dec 15 13:22 runtime_log
[2025-12-15 13:22:24] -rw------- 1 boinc boinc   1228800 Dec 15 13:22 result.tar.gz
[2025-12-15 13:22:24] -rw-r--r-- 1 boinc boinc      8880 Dec 15 13:22 runtime_log.err
[2025-12-15 13:22:24] -rw------- 1 boinc boinc       663 Dec 15 13:22 aEeKDmmjwo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmx0QKDmVrHrwn.diag
[2025-12-15 13:22:24] -rw-r--r-- 1 boinc boinc        26 Dec 15 13:22 wrapper_checkpoint.txt
[2025-12-15 13:22:24] -rw-r--r-- 1 boinc boinc      8192 Dec 15 13:22 boinc_mmap_file
[2025-12-15 13:22:24] -rw-r--r-- 1 boinc boinc     22275 Dec 15 13:22 stderr.txt
[2025-12-15 13:22:24] HITS file was successfully produced:
[2025-12-15 13:22:24] -rw------- 1 boinc boinc 221807918 Dec 15 13:20 shared/HITS.pool.root.1
[2025-12-15 13:22:24]  *** Contents of shared directory: ***
[2025-12-15 13:22:24] total 436852
[2025-12-15 13:22:24] -rw-r--r-- 2 boinc boinc 223677942 Dec 15 11:46 ATLAS.root_0
[2025-12-15 13:22:24] -rw-r--r-- 2 boinc boinc     15847 Dec 15 11:46 start_atlas.sh
[2025-12-15 13:22:24] -rw-r--r-- 2 boinc boinc    592393 Dec 15 11:46 input.tar.gz
[2025-12-15 13:22:24] -rw------- 1 boinc boinc 221807918 Dec 15 13:20 HITS.pool.root.1
[2025-12-15 13:22:24] -rw------- 1 boinc boinc   1228800 Dec 15 13:22 result.tar.gz
13:22:25 (3282382): run_atlas exited; CPU time 53366.826104
13:22:25 (3282382): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN