Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:56:22 (2325889): wrapper (7.7.26015): starting
20:56:22 (2325889): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 20:56:22] Arguments: --nthreads 8
[2025-12-14 20:56:22] Threads: 8
[2025-12-14 20:56:22] Checking for CVMFS
[2025-12-14 20:56:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 20:56:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 20:56:23] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 20:56:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 20:56:23] 2.13.2.0 7154 60452 169476 154014 0 342 35158089 40960001 9533 16776704 0 56391942 99.707 48993493 37360 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 20:56:23] CVMFS is ok
[2025-12-14 20:56:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 20:56:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 20:56:23] Further information can be found at the LHC@home message board.
[2025-12-14 20:56:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 20:56:23] Checking for apptainer binary...
[2025-12-14 20:56:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 20:56:23] Running /usr/bin/apptainer --version
[2025-12-14 20:56:23] apptainer version 1.4.4-1.el9
[2025-12-14 20:56:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 20:56:24] c-211-7.aglt2.org
[2025-12-14 20:56:24] apptainer works
[2025-12-14 20:56:24] Set ATHENA_PROC_NUMBER=8
[2025-12-14 20:56:24] Set ATHENA_CORE_NUMBER=8
[2025-12-14 20:56:24] Starting ATLAS job with PandaID=6929465722
[2025-12-14 20:56:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 07:04:17]  *** The last 200 lines of the pilot log: ***
[2025-12-15 07:04:17] 2025-12-15 12:03:38,074 | INFO     | PID=2329897 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-15 07:04:17] 2025-12-15 12:03:38,074 | INFO     | .. there are 8 such processes running
[2025-12-15 07:04:17] 2025-12-15 12:03:39,075 | INFO     | time since job start (36409s) is within the limit (174528.0s)
[2025-12-15 07:04:17] 2025-12-15 12:03:39,322 | INFO     | monitor loop #2149: job 0:6929465722 is in state 'finished'
[2025-12-15 07:04:17] 2025-12-15 12:03:39,323 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 07:04:17] 2025-12-15 12:03:41,082 | INFO     | time since job start (36411s) is within the limit (174528.0s)
[2025-12-15 07:04:17] 2025-12-15 12:03:41,828 | INFO     | monitor loop #2150: job 0:6929465722 is in state 'finished'
[2025-12-15 07:04:17] 2025-12-15 12:03:41,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 07:04:17] 2025-12-15 12:03:43,089 | INFO     | time since job start (36413s) is within the limit (174528.0s)
[2025-12-15 07:04:17] 2025-12-15 12:03:43,788 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-15 07:04:17] 2025-12-15 12:03:43,797 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2586.1356250000003
[2025-12-15 07:04:17] 2025-12-15 12:03:43,807 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6929465722/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 07:04:17] 2025-12-15 12:03:43,807 | INFO     | extracted standard info from prmon json
[2025-12-15 07:04:17] 2025-12-15 12:03:43,808 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 07:04:17] 2025-12-15 12:03:43,808 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 07:04:17] 2025-12-15 12:03:43,808 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 07:04:17] 2025-12-15 12:03:43,808 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 07:04:17] 2025-12-15 12:03:43,819 | INFO     | fitting pss+swap vs Time
[2025-12-15 07:04:17] 2025-12-15 12:03:43,821 | INFO     | sum of square deviations: 65646654221.543686
[2025-12-15 07:04:17] 2025-12-15 12:03:43,830 | INFO     | sum of deviations: 205819310276.7519
[2025-12-15 07:04:17] 2025-12-15 12:03:43,831 | INFO     | mean x: 1765782037.328859
[2025-12-15 07:04:17] 2025-12-15 12:03:43,831 | INFO     | mean y: 2487717.5318791945
[2025-12-15 07:04:17] 2025-12-15 12:03:43,831 | INFO     | intersect: -5533697566.117104
[2025-12-15 07:04:17] 2025-12-15 12:03:43,832 | INFO     | chi2: 3.0992734096245638
[2025-12-15 07:04:17] 2025-12-15 12:03:43,833 | INFO     | sum of square deviations: 64008429983.079575
[2025-12-15 07:04:17] 2025-12-15 12:03:43,842 | INFO     | sum of deviations: 239751592173.2757
[2025-12-15 07:04:17] 2025-12-15 12:03:43,842 | INFO     | mean x: 1765781884.8358715
[2025-12-15 07:04:17] 2025-12-15 12:03:43,842 | INFO     | mean y: 2490852.260575296
[2025-12-15 07:04:17] 2025-12-15 12:03:43,843 | INFO     | intersect: -6611466378.561035
[2025-12-15 07:04:17] 2025-12-15 12:03:43,843 | INFO     | chi2: 2.4184695328135555
[2025-12-15 07:04:17] 2025-12-15 12:03:43,844 | INFO     | current chi2=2.4184695328135555 (change=21.9665639919609 %)
[2025-12-15 07:04:17] 2025-12-15 12:03:43,844 | INFO     | right removable region: 590
[2025-12-15 07:04:17] 2025-12-15 12:03:43,845 | INFO     | sum of square deviations: 64008128643.079506
[2025-12-15 07:04:17] 2025-12-15 12:03:43,854 | INFO     | sum of deviations: 74992300214.81395
[2025-12-15 07:04:17] 2025-12-15 12:03:43,854 | INFO     | mean x: 1765782189.8358715
[2025-12-15 07:04:17] 2025-12-15 12:03:43,854 | INFO     | mean y: 2499865.2351945853
[2025-12-15 07:04:17] 2025-12-15 12:03:43,854 | INFO     | intersect: -2066300940.2459445
[2025-12-15 07:04:17] 2025-12-15 12:03:43,855 | INFO     | chi2: 0.9848977517249287
[2025-12-15 07:04:17] 2025-12-15 12:03:43,856 | INFO     | current chi2=0.9848977517249287 (change=68.22165644804355 %)
[2025-12-15 07:04:17] 2025-12-15 12:03:43,856 | INFO     | sum of square deviations: 62397091952.05622
[2025-12-15 07:04:17] 2025-12-15 12:03:43,866 | INFO     | sum of deviations: 54860053247.302025
[2025-12-15 07:04:17] 2025-12-15 12:03:43,866 | INFO     | mean x: 1765782342.3430035
[2025-12-15 07:04:17] 2025-12-15 12:03:43,866 | INFO     | mean y: 2501767.476109215
[2025-12-15 07:04:17] 2025-12-15 12:03:43,866 | INFO     | intersect: -1549989066.5280643
[2025-12-15 07:04:17] 2025-12-15 12:03:43,867 | INFO     | chi2: 0.944217681545212
[2025-12-15 07:04:17] 2025-12-15 12:03:43,867 | INFO     | current chi2=0.944217681545212 (change=4.13038511951829 %)
[2025-12-15 07:04:17] 2025-12-15 12:03:43,867 | INFO     | left removable region: 20
[2025-12-15 07:04:17] 2025-12-15 12:03:43,868 | INFO     | sum of square deviations: 57424259397.550865
[2025-12-15 07:04:17] 2025-12-15 12:03:43,877 | INFO     | sum of deviations: 58612621750.28776
[2025-12-15 07:04:17] 2025-12-15 12:03:43,877 | INFO     | mean x: 1765782464.3614035
[2025-12-15 07:04:17] 2025-12-15 12:03:43,877 | INFO     | mean y: 2508053.940350877
[2025-12-15 07:04:17] 2025-12-15 12:03:43,877 | INFO     | intersect: -1799816273.1422212
[2025-12-15 07:04:17] 2025-12-15 12:03:43,878 | INFO     | chi2: 0.14313305303855273
[2025-12-15 07:04:17] 2025-12-15 12:03:43,879 | INFO     | current memory leak: 1.02 B/s (using 570 data points, chi2=0.14)
[2025-12-15 07:04:17] 2025-12-15 12:03:43,880 | INFO     | could have reported an average CPU frequency of 2557 MHz (23 samples)
[2025-12-15 07:04:17] 2025-12-15 12:03:43,880 | INFO     | ..............................
[2025-12-15 07:04:17] 2025-12-15 12:03:43,880 | INFO     | . Timing measurements:
[2025-12-15 07:04:17] 2025-12-15 12:03:43,880 | INFO     | . get job = 0 s
[2025-12-15 07:04:17] 2025-12-15 12:03:43,880 | INFO     | . initial setup = 6 s
[2025-12-15 07:04:17] 2025-12-15 12:03:43,880 | INFO     | . payload setup = 23 s
[2025-12-15 07:04:17] 2025-12-15 12:03:43,881 | INFO     | . stage-in = 0 s
[2025-12-15 07:04:17] 2025-12-15 12:03:43,881 | INFO     | . payload execution = 36326 s
[2025-12-15 07:04:17] 2025-12-15 12:03:43,881 | INFO     | . stage-out = 3 s
[2025-12-15 07:04:17] 2025-12-15 12:03:43,881 | INFO     | . log creation = 0 s
[2025-12-15 07:04:17] 2025-12-15 12:03:43,881 | INFO     | ..............................
[2025-12-15 07:04:17] 2025-12-15 12:03:44,005 | INFO     | 
[2025-12-15 07:04:17] 2025-12-15 12:03:44,005 | INFO     | job summary report
[2025-12-15 07:04:17] 2025-12-15 12:03:44,005 | INFO     | --------------------------------------------------
[2025-12-15 07:04:17] 2025-12-15 12:03:44,005 | INFO     | PanDA job id: 6929465722
[2025-12-15 07:04:17] 2025-12-15 12:03:44,005 | INFO     | task id: 47898763
[2025-12-15 07:04:17] 2025-12-15 12:03:44,005 | INFO     | errors: (none)
[2025-12-15 07:04:17] 2025-12-15 12:03:44,005 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 07:04:17] 2025-12-15 12:03:44,005 | INFO     | pilot state: finished 
[2025-12-15 07:04:17] 2025-12-15 12:03:44,005 | INFO     | transexitcode: 0
[2025-12-15 07:04:17] 2025-12-15 12:03:44,006 | INFO     | exeerrorcode: 0
[2025-12-15 07:04:17] 2025-12-15 12:03:44,006 | INFO     | exeerrordiag: 
[2025-12-15 07:04:17] 2025-12-15 12:03:44,006 | INFO     | exitcode: 0
[2025-12-15 07:04:17] 2025-12-15 12:03:44,006 | INFO     | exitmsg: OK
[2025-12-15 07:04:17] 2025-12-15 12:03:44,006 | INFO     | cpuconsumptiontime: 87554 s
[2025-12-15 07:04:17] 2025-12-15 12:03:44,006 | INFO     | nevents: 400
[2025-12-15 07:04:17] 2025-12-15 12:03:44,006 | INFO     | neventsw: 0
[2025-12-15 07:04:17] 2025-12-15 12:03:44,006 | INFO     | pid: 2345678
[2025-12-15 07:04:17] 2025-12-15 12:03:44,006 | INFO     | pgrp: 2345678
[2025-12-15 07:04:17] 2025-12-15 12:03:44,006 | INFO     | corecount: 8
[2025-12-15 07:04:17] 2025-12-15 12:03:44,006 | INFO     | event service: False
[2025-12-15 07:04:17] 2025-12-15 12:03:44,006 | INFO     | sizes: {0: 2283126, 1: 2283811, 2: 2284010, 13: 2284010, 15: 2284328, 24: 2284356, 36354: 2325084, 36360: 2334082, 36361: 2334138, 36377: 2334332}
[2025-12-15 07:04:17] 2025-12-15 12:03:44,006 | INFO     | --------------------------------------------------
[2025-12-15 07:04:17] 2025-12-15 12:03:44,006 | INFO     | 
[2025-12-15 07:04:17] 2025-12-15 12:03:44,006 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-15 07:04:17] 2025-12-15 12:03:44,040 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 07:04:17] 2025-12-15 12:03:44,041 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 07:04:17] 2025-12-15 12:03:44,041 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 07:04:17] 2025-12-15 12:03:44,041 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 07:04:17] 2025-12-15 12:03:44,041 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 07:04:17] 2025-12-15 12:03:44,041 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 07:04:17] 2025-12-15 12:03:44,041 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 07:04:17] 2025-12-15 12:03:44,041 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 07:04:17] 2025-12-15 12:03:44,041 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 07:04:17] 2025-12-15 12:03:44,042 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 07:04:17] 2025-12-15 12:03:44,042 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 07:04:17] 2025-12-15 12:03:44,042 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 07:04:17] 2025-12-15 12:03:44,042 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 07:04:17] 2025-12-15 12:03:44,042 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 07:04:17] 2025-12-15 12:03:44,042 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 07:04:17] 2025-12-15 12:03:44,042 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 07:04:17] 2025-12-15 12:03:44,042 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 07:04:17] 2025-12-15 12:03:44,042 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 07:04:17] 2025-12-15 12:03:44,043 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 07:04:17] 2025-12-15 12:03:44,043 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 07:04:17] 2025-12-15 12:03:44,043 | INFO     | job 6929465722 has completed (purged errors)
[2025-12-15 07:04:17] 2025-12-15 12:03:44,043 | INFO     | overall cleanup function is called
[2025-12-15 07:04:17] 2025-12-15 12:03:45,096 | INFO     | --- collectZombieJob: --- 10, [2345678]
[2025-12-15 07:04:17] 2025-12-15 12:03:45,096 | INFO     | zombie collector waiting for pid 2345678
[2025-12-15 07:04:17] 2025-12-15 12:03:45,096 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 07:04:17] 2025-12-15 12:03:45,096 | INFO     | collected zombie processes
[2025-12-15 07:04:17] 2025-12-15 12:03:45,124 | INFO     | will attempt to kill all subprocesses of pid=2345678
[2025-12-15 07:04:17] 2025-12-15 12:03:45,982 | INFO     | process IDs to be killed: [2345678] (in reverse order)
[2025-12-15 07:04:17] 2025-12-15 12:03:46,170 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 07:04:17] 2025-12-15 12:03:46,182 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 07:04:17] 2025-12-15 12:03:46,228 | INFO     | did not find any defunct processes belonging to 2345678
[2025-12-15 07:04:17] 2025-12-15 12:03:46,298 | INFO     | did not find any defunct processes belonging to 2345678
[2025-12-15 07:04:17] 2025-12-15 12:03:46,299 | INFO     | ready for new job
[2025-12-15 07:04:17] 2025-12-15 12:03:46,299 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 07:04:17] 2025-12-15 12:03:46,306 | INFO     | ***************************************
[2025-12-15 07:04:17] 2025-12-15 12:03:46,307 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 07:04:17] 2025-12-15 12:03:46,307 | INFO     | ***************************************
[2025-12-15 07:04:17] 2025-12-15 12:03:46,307 | INFO     | 
[2025-12-15 07:04:17] 2025-12-15 12:03:46,314 | INFO     | architecture information:
[2025-12-15 07:04:17] 2025-12-15 12:03:46,315 | INFO     | executing command: cat /etc/os-release
[2025-12-15 07:04:17] 2025-12-15 12:03:46,389 | INFO     | cat /etc/os-release:
[2025-12-15 07:04:17] NAME="CentOS Linux"
[2025-12-15 07:04:17] VERSION="7 (Core)"
[2025-12-15 07:04:17] ID="centos"
[2025-12-15 07:04:17] ID_LIKE="rhel fedora"
[2025-12-15 07:04:17] VERSION_ID="7"
[2025-12-15 07:04:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 07:04:17] ANSI_COLOR="0;31"
[2025-12-15 07:04:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 07:04:17] HOME_URL="https://www.centos.org/"
[2025-12-15 07:04:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 07:04:17] 
[2025-12-15 07:04:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 07:04:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 07:04:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 07:04:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 07:04:17] 
[2025-12-15 07:04:17] 2025-12-15 12:03:46,390 | INFO     | ***************************************
[2025-12-15 07:04:17] 2025-12-15 12:03:46,893 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-15 07:04:17] 2025-12-15 12:03:46,942 | INFO     | sufficient remaining disk space (63810043904 B)
[2025-12-15 07:04:17] 2025-12-15 12:03:46,943 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 07:04:17] 2025-12-15 12:03:46,943 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 07:04:17] 2025-12-15 12:03:46,943 | INFO     | update_server=False
[2025-12-15 07:04:17] 2025-12-15 12:03:46,943 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 07:04:17] 2025-12-15 12:03:47,357 | INFO     | all data control threads have been joined
[2025-12-15 07:04:17] 2025-12-15 12:03:47,489 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 07:04:17] 2025-12-15 12:03:47,668 | INFO     | all payload control threads have been joined
[2025-12-15 07:04:17] 2025-12-15 12:03:47,886 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 07:04:17] 2025-12-15 12:03:47,890 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 07:04:17] 2025-12-15 12:03:47,890 | INFO     | aborting loop
[2025-12-15 07:04:17] 2025-12-15 12:03:47,948 | INFO     | [job] retrieve thread has finished
[2025-12-15 07:04:17] 2025-12-15 12:03:47,969 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 07:04:17] 2025-12-15 12:03:48,050 | INFO     | all job control threads have been joined
[2025-12-15 07:04:17] 2025-12-15 12:03:48,143 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 07:04:17] 2025-12-15 12:03:48,242 | INFO     | [data] copytool_in thread has finished
[2025-12-15 07:04:17] 2025-12-15 12:03:48,365 | INFO     | [data] control thread has finished
[2025-12-15 07:04:17] 2025-12-15 12:03:48,473 | INFO     | [payload] failed_post thread has finished
[2025-12-15 07:04:17] 2025-12-15 12:03:48,535 | INFO     | [payload] validate_post thread has finished
[2025-12-15 07:04:17] 2025-12-15 12:03:48,674 | INFO     | [payload] control thread has finished
[2025-12-15 07:04:17] 2025-12-15 12:03:48,899 | INFO     | [job] job monitor thread has finished
[2025-12-15 07:04:17] 2025-12-15 12:03:49,033 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 07:04:17] 2025-12-15 12:03:49,035 | INFO     | [job] validate thread has finished
[2025-12-15 07:04:17] 2025-12-15 12:03:49,059 | INFO     | [job] control thread has finished
[2025-12-15 07:04:17] 2025-12-15 12:03:49,271 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 07:04:17] 2025-12-15 12:03:49,373 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 07:04:17] 2025-12-15 12:03:49,496 | INFO     | [data] copytool_out thread has finished
[2025-12-15 07:04:17] 2025-12-15 12:03:50,039 | INFO     | [job] queue monitor thread has finished
[2025-12-15 07:04:17] 2025-12-15 12:03:51,899 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 07:04:17] 2025-12-15 12:03:57,742 | INFO     | [monitor] cgroup control has ended
[2025-12-15 07:04:17] 2025-12-15 12:03:59,470 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140013107554112)>', '<ExcThread(monitor, started 140012603549440)>']
[2025-12-15 07:04:17] 2025-12-15 12:04:04,496 | INFO     | all workflow threads have been joined
[2025-12-15 07:04:17] 2025-12-15 12:04:04,496 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 07:04:17] 2025-12-15 12:04:04,496 | INFO     | traces error code: 0
[2025-12-15 07:04:17] 2025-12-15 12:04:04,497 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 07:04:17] 2025-12-15 12:04:16,710 | INFO     | PID=2329897 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-15 07:04:17] 2025-12-15 12:04:16,735 | INFO     | .. there are 8 such processes running
[2025-12-15 07:04:17] 2025-12-15 12:04:16,736 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 07:04:17] 2025-12-15 12:04:16,736 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 07:04:17] 2025-12-15 12:04:16,736 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 07:04:17] 2025-12-15 12:04:16,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 07:04:17] 2025-12-15 12:04:16,736 | INFO     | [monitor] control thread has ended
[2025-12-15 07:04:17] 2025-12-15 12:04:17,060 [wrapper] ==== pilot stdout END ====
[2025-12-15 07:04:17] 2025-12-15 12:04:17,064 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 07:04:17] 2025-12-15 12:04:17,067 [wrapper] pilotpid: 2329897
[2025-12-15 07:04:17] 2025-12-15 12:04:17,069 [wrapper] Pilot exit status: 0
[2025-12-15 07:04:17] 2025-12-15 12:04:17,083 [wrapper] pandaids: 6929465722
[2025-12-15 07:04:17] 2025-12-15 12:04:17,370 [wrapper] cleanup supervisor_pilot 3159113 2329898
[2025-12-15 07:04:17] 2025-12-15 12:04:17,391 [wrapper] Test setup, not cleaning
[2025-12-15 07:04:17] 2025-12-15 12:04:17,397 [wrapper] apfmon messages muted
[2025-12-15 07:04:17] 2025-12-15 12:04:17,402 [wrapper] ==== wrapper stdout END ====
[2025-12-15 07:04:17] 2025-12-15 12:04:17,405 [wrapper] ==== wrapper stderr END ====
[2025-12-15 07:04:17]  *** Error codes and diagnostics ***
[2025-12-15 07:04:17]     "exeErrorCode": 0,
[2025-12-15 07:04:17]     "exeErrorDiag": "",
[2025-12-15 07:04:17]     "pilotErrorCode": 0,
[2025-12-15 07:04:17]     "pilotErrorDiag": "",
[2025-12-15 07:04:17]  *** Listing of results directory ***
[2025-12-15 07:04:17] total 441928
[2025-12-15 07:04:17] -rw-r--r--. 1 boincer umatlas    579449 Dec 14 13:53 pilot3.tar.gz
[2025-12-15 07:04:17] -rwx------. 1 boincer umatlas     36322 Dec 14 13:55 runpilot2-wrapper.sh
[2025-12-15 07:04:17] -rw-r--r--. 1 boincer umatlas      5112 Dec 14 13:56 queuedata.json
[2025-12-15 07:04:17] -rw-r--r--. 1 boincer umatlas       100 Dec 14 20:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 07:04:17] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 14 20:56 run_atlas
[2025-12-15 07:04:17] -rw-r--r--. 1 boincer umatlas       105 Dec 14 20:56 job.xml
[2025-12-15 07:04:17] -rw-r--r--. 2 boincer umatlas 223366391 Dec 14 20:56 EVNT.47898761._000525.pool.root.1
[2025-12-15 07:04:17] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 20:56 start_atlas.sh
[2025-12-15 07:04:17] drwxrwx--x. 2 boincer umatlas      4096 Dec 14 20:56 shared
[2025-12-15 07:04:17] -rw-r--r--. 2 boincer umatlas    592405 Dec 14 20:56 input.tar.gz
[2025-12-15 07:04:17] -rw-r--r--. 1 boincer umatlas         0 Dec 14 20:56 boinc_lockfile
[2025-12-15 07:04:17] -rw-r--r--. 1 boincer umatlas      2505 Dec 14 20:56 pandaJob.out
[2025-12-15 07:04:17] -rw-------. 1 boincer umatlas        57 Dec 14 20:56 setup.sh.local
[2025-12-15 07:04:17] -rw-------. 1 boincer umatlas    991024 Dec 14 20:56 agis_schedconf.cvmfs.json
[2025-12-15 07:04:17] drwx------. 5 boincer umatlas      4096 Dec 14 20:56 pilot3
[2025-12-15 07:04:17] -rw-r--r--. 1 boincer umatlas      6613 Dec 15 07:01 init_data.xml
[2025-12-15 07:04:17] -rw-------. 1 boincer umatlas 214872030 Dec 15 07:02 HITS.47898763._011855.pool.root.1
[2025-12-15 07:04:17] -rw-r--r--. 1 boincer umatlas       531 Dec 15 07:02 boinc_task_state.xml
[2025-12-15 07:04:17] -rw-------. 1 boincer umatlas      1042 Dec 15 07:03 memory_monitor_summary.json
[2025-12-15 07:04:17] -rw-------. 1 boincer umatlas   1516240 Dec 15 07:03 agis_ddmendpoints.agis.ALL.json
[2025-12-15 07:04:17] -rw-------. 1 boincer umatlas    719910 Dec 15 07:03 log.47898763._011855.job.log.tgz.1
[2025-12-15 07:04:17] -rw-------. 1 boincer umatlas      7820 Dec 15 07:03 heartbeat.json
[2025-12-15 07:04:17] -rw-r--r--. 1 boincer umatlas      8192 Dec 15 07:04 boinc_mmap_file
[2025-12-15 07:04:17] -rw-r--r--. 1 boincer umatlas        28 Dec 15 07:04 wrapper_checkpoint.txt
[2025-12-15 07:04:17] -rw-------. 1 boincer umatlas        95 Dec 15 07:04 pilot_heartbeat.json
[2025-12-15 07:04:17] -rw-------. 1 boincer umatlas       822 Dec 15 07:04 pilotlog.txt
[2025-12-15 07:04:17] -rw-------. 1 boincer umatlas   4475164 Dec 15 07:04 log.47898763._011855.job.log.1
[2025-12-15 07:04:17] -rw-------. 1 boincer umatlas       357 Dec 15 07:04 output.list
[2025-12-15 07:04:17] -rw-r--r--. 1 boincer umatlas       620 Dec 15 07:04 runtime_log
[2025-12-15 07:04:17] -rw-------. 1 boincer umatlas   5212160 Dec 15 07:04 result.tar.gz
[2025-12-15 07:04:17] -rw-r--r--. 1 boincer umatlas      9338 Dec 15 07:04 runtime_log.err
[2025-12-15 07:04:17] -rw-------. 1 boincer umatlas       658 Dec 15 07:04 PPhNDm8Q6o8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmqRKDmdLF12m.diag
[2025-12-15 07:04:17] -rw-r--r--. 1 boincer umatlas     21498 Dec 15 07:04 stderr.txt
[2025-12-15 07:04:17] HITS file was successfully produced:
[2025-12-15 07:04:17] -rw-------. 1 boincer umatlas 214872030 Dec 15 07:02 shared/HITS.pool.root.1
[2025-12-15 07:04:17]  *** Contents of shared directory: ***
[2025-12-15 07:04:17] total 433660
[2025-12-15 07:04:17] -rw-r--r--. 2 boincer umatlas 223366391 Dec 14 20:56 ATLAS.root_0
[2025-12-15 07:04:17] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 20:56 start_atlas.sh
[2025-12-15 07:04:17] -rw-r--r--. 2 boincer umatlas    592405 Dec 14 20:56 input.tar.gz
[2025-12-15 07:04:17] -rw-------. 1 boincer umatlas 214872030 Dec 15 07:02 HITS.pool.root.1
[2025-12-15 07:04:17] -rw-------. 1 boincer umatlas   5212160 Dec 15 07:04 result.tar.gz
07:04:39 (2325889): run_atlas exited; CPU time 88552.678040
07:04:39 (2325889): called boinc_finish(0)

</stderr_txt>
]]>

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