Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:52:27 (1091907): wrapper (7.7.26015): starting
01:52:27 (1091907): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 01:52:27] Arguments: --nthreads 4
[2025-12-16 01:52:27] Threads: 4
[2025-12-16 01:52:27] Checking for CVMFS
[2025-12-16 01:52:27] No cvmfs_config command found, will try listing directly
[2025-12-16 01:52:27] CVMFS is ok
[2025-12-16 01:52:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 01:52:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 01:52:27] Further information can be found at the LHC@home message board.
[2025-12-16 01:52:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 01:52:27] Checking for apptainer binary...
[2025-12-16 01:52:27] which: no apptainer in ((null))
[2025-12-16 01:52:27] apptainer is not installed, using version from CVMFS
[2025-12-16 01:52:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 01:52:27] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-12-16 01:52:27] apptainer works
[2025-12-16 01:52:27] Set ATHENA_PROC_NUMBER=4
[2025-12-16 01:52:27] Set ATHENA_CORE_NUMBER=4
[2025-12-16 01:52:27] Starting ATLAS job with PandaID=6929436662
[2025-12-16 01:52:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 05:58:44]  *** The last 200 lines of the pilot log: ***
[2025-12-16 05:58:44] 2025-12-16 04:51:32,454 | INFO     | time since job start (14331s) is within the limit (174528.0s)
[2025-12-16 05:58:44] 2025-12-16 04:51:33,753 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 05:58:44] 2025-12-16 04:51:33,773 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2699.2961484374987
[2025-12-16 05:58:44] 2025-12-16 04:51:33,796 | INFO     | using path: /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6929436662/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 05:58:44] 2025-12-16 04:51:33,796 | INFO     | extracted standard info from prmon json
[2025-12-16 05:58:44] 2025-12-16 04:51:33,796 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 05:58:44] 2025-12-16 04:51:33,797 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 05:58:44] 2025-12-16 04:51:33,797 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 05:58:44] 2025-12-16 04:51:33,797 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 05:58:44] 2025-12-16 04:51:33,801 | INFO     | fitting pss+swap vs Time
[2025-12-16 05:58:44] 2025-12-16 04:51:33,802 | INFO     | sum of square deviations: 4024149870.0
[2025-12-16 05:58:44] 2025-12-16 04:51:33,803 | INFO     | sum of deviations: 11233772626.999998
[2025-12-16 05:58:44] 2025-12-16 04:51:33,803 | INFO     | mean x: 1765853533.0
[2025-12-16 05:58:44] 2025-12-16 04:51:33,804 | INFO     | mean y: 2323990.8680851064
[2025-12-16 05:58:44] 2025-12-16 04:51:33,804 | INFO     | intersect: -4927213358.173698
[2025-12-16 05:58:44] 2025-12-16 04:51:33,804 | INFO     | chi2: 2.0580635100462157
[2025-12-16 05:58:44] 2025-12-16 04:51:33,804 | INFO     | sum of square deviations: 3772712597.5
[2025-12-16 05:58:44] 2025-12-16 04:51:33,806 | INFO     | sum of deviations: 25367914663.500004
[2025-12-16 05:58:44] 2025-12-16 04:51:33,806 | INFO     | mean x: 1765853380.5
[2025-12-16 05:58:44] 2025-12-16 04:51:33,806 | INFO     | mean y: 2332412.5086956522
[2025-12-16 05:58:44] 2025-12-16 04:51:33,806 | INFO     | intersect: -11871357063.456482
[2025-12-16 05:58:44] 2025-12-16 04:51:33,806 | INFO     | chi2: 1.2972978406191489
[2025-12-16 05:58:44] 2025-12-16 04:51:33,807 | INFO     | current chi2=1.2972978406191489 (change=36.965121130298996 %)
[2025-12-16 05:58:44] 2025-12-16 04:51:33,807 | INFO     | sum of square deviations: 3531973200.0
[2025-12-16 05:58:44] 2025-12-16 04:51:33,808 | INFO     | sum of deviations: 24827391681.0
[2025-12-16 05:58:44] 2025-12-16 04:51:33,808 | INFO     | mean x: 1765853228.0
[2025-12-16 05:58:44] 2025-12-16 04:51:33,808 | INFO     | mean y: 2332070.053333333
[2025-12-16 05:58:44] 2025-12-16 04:51:33,809 | INFO     | intersect: -12410426255.155418
[2025-12-16 05:58:44] 2025-12-16 04:51:33,809 | INFO     | chi2: 1.2978622297212283
[2025-12-16 05:58:44] 2025-12-16 04:51:33,809 | INFO     | current chi2=1.2978622297212283 (change=-0.04350497506494684 %)
[2025-12-16 05:58:44] 2025-12-16 04:51:33,809 | INFO     | right removable region: 224
[2025-12-16 05:58:44] 2025-12-16 04:51:33,809 | INFO     | sum of square deviations: 3772712597.5
[2025-12-16 05:58:44] 2025-12-16 04:51:33,811 | INFO     | sum of deviations: -17483793251.5
[2025-12-16 05:58:44] 2025-12-16 04:51:33,811 | INFO     | mean x: 1765853685.5
[2025-12-16 05:58:44] 2025-12-16 04:51:33,811 | INFO     | mean y: 2341207.960869565
[2025-12-16 05:58:44] 2025-12-16 04:51:33,811 | INFO     | intersect: 8185795407.504174
[2025-12-16 05:58:44] 2025-12-16 04:51:33,811 | INFO     | chi2: 0.787553427992329
[2025-12-16 05:58:44] 2025-12-16 04:51:33,811 | INFO     | current chi2=0.787553427992329 (change=61.73327867930354 %)
[2025-12-16 05:58:44] 2025-12-16 04:51:33,812 | INFO     | sum of square deviations: 3531973200.0
[2025-12-16 05:58:44] 2025-12-16 04:51:33,813 | INFO     | sum of deviations: -15376646065.000004
[2025-12-16 05:58:44] 2025-12-16 04:51:33,813 | INFO     | mean x: 1765853838.0
[2025-12-16 05:58:44] 2025-12-16 04:51:33,813 | INFO     | mean y: 2339869.657777778
[2025-12-16 05:58:44] 2025-12-16 04:51:33,813 | INFO     | intersect: 7690084915.245285
[2025-12-16 05:58:44] 2025-12-16 04:51:33,814 | INFO     | chi2: 0.7857820297408118
[2025-12-16 05:58:44] 2025-12-16 04:51:33,814 | INFO     | current chi2=0.7857820297408118 (change=0.22492420051207365 %)
[2025-12-16 05:58:44] 2025-12-16 04:51:33,814 | INFO     | left removable region: 20
[2025-12-16 05:58:44] 2025-12-16 04:51:33,814 | INFO     | sum of square deviations: 2632440055.0
[2025-12-16 05:58:44] 2025-12-16 04:51:33,815 | INFO     | sum of deviations: 2836135616.5
[2025-12-16 05:58:44] 2025-12-16 04:51:33,815 | INFO     | mean x: 1765853807.5
[2025-12-16 05:58:44] 2025-12-16 04:51:33,816 | INFO     | mean y: 2346015.6421568627
[2025-12-16 05:58:44] 2025-12-16 04:51:33,816 | INFO     | intersect: -1900147781.8786702
[2025-12-16 05:58:44] 2025-12-16 04:51:33,816 | INFO     | chi2: 0.0008920002161187413
[2025-12-16 05:58:44] 2025-12-16 04:51:33,816 | INFO     | current memory leak: 1.08 B/s (using 204 data points, chi2=0.00)
[2025-12-16 05:58:44] 2025-12-16 04:51:33,816 | INFO     | could have reported an average CPU frequency of 2705 MHz (11 samples)
[2025-12-16 05:58:44] 2025-12-16 04:51:33,817 | INFO     | ..............................
[2025-12-16 05:58:44] 2025-12-16 04:51:33,817 | INFO     | . Timing measurements:
[2025-12-16 05:58:44] 2025-12-16 04:51:33,817 | INFO     | . get job = 0 s
[2025-12-16 05:58:44] 2025-12-16 04:51:33,817 | INFO     | . initial setup = 1 s
[2025-12-16 05:58:44] 2025-12-16 04:51:33,817 | INFO     | . payload setup = 8 s
[2025-12-16 05:58:44] 2025-12-16 04:51:33,817 | INFO     | . stage-in = 0 s
[2025-12-16 05:58:44] 2025-12-16 04:51:33,817 | INFO     | . payload execution = 14288 s
[2025-12-16 05:58:44] 2025-12-16 04:51:33,817 | INFO     | . stage-out = 1 s
[2025-12-16 05:58:44] 2025-12-16 04:51:33,817 | INFO     | . log creation = 0 s
[2025-12-16 05:58:44] 2025-12-16 04:51:33,817 | INFO     | ..............................
[2025-12-16 05:58:44] 2025-12-16 04:51:33,926 | INFO     | 
[2025-12-16 05:58:44] 2025-12-16 04:51:33,926 | INFO     | job summary report
[2025-12-16 05:58:44] 2025-12-16 04:51:33,926 | INFO     | --------------------------------------------------
[2025-12-16 05:58:44] 2025-12-16 04:51:33,926 | INFO     | PanDA job id: 6929436662
[2025-12-16 05:58:44] 2025-12-16 04:51:33,926 | INFO     | task id: 47898763
[2025-12-16 05:58:44] 2025-12-16 04:51:33,927 | INFO     | errors: (none)
[2025-12-16 05:58:44] 2025-12-16 04:51:33,927 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 05:58:44] 2025-12-16 04:51:33,927 | INFO     | pilot state: finished 
[2025-12-16 05:58:44] 2025-12-16 04:51:33,927 | INFO     | transexitcode: 0
[2025-12-16 05:58:44] 2025-12-16 04:51:33,927 | INFO     | exeerrorcode: 0
[2025-12-16 05:58:44] 2025-12-16 04:51:33,927 | INFO     | exeerrordiag: 
[2025-12-16 05:58:44] 2025-12-16 04:51:33,927 | INFO     | exitcode: 0
[2025-12-16 05:58:44] 2025-12-16 04:51:33,927 | INFO     | exitmsg: OK
[2025-12-16 05:58:44] 2025-12-16 04:51:33,927 | INFO     | cpuconsumptiontime: 55330 s
[2025-12-16 05:58:44] 2025-12-16 04:51:33,927 | INFO     | nevents: 400
[2025-12-16 05:58:44] 2025-12-16 04:51:33,927 | INFO     | neventsw: 0
[2025-12-16 05:58:44] 2025-12-16 04:51:33,927 | INFO     | pid: 1115125
[2025-12-16 05:58:44] 2025-12-16 04:51:33,927 | INFO     | pgrp: 1115125
[2025-12-16 05:58:44] 2025-12-16 04:51:33,927 | INFO     | corecount: 4
[2025-12-16 05:58:44] 2025-12-16 04:51:33,927 | INFO     | event service: False
[2025-12-16 05:58:44] 2025-12-16 04:51:33,928 | INFO     | sizes: {0: 2283793, 1: 2283992, 7: 2284254, 11: 2284282, 14301: 2315502, 14303: 2324524, 14306: 2324708, 14314: 2324902}
[2025-12-16 05:58:44] 2025-12-16 04:51:33,928 | INFO     | --------------------------------------------------
[2025-12-16 05:58:44] 2025-12-16 04:51:33,928 | INFO     | 
[2025-12-16 05:58:44] 2025-12-16 04:51:33,928 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2025-12-16 05:58:44] 2025-12-16 04:51:33,960 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 05:58:44] 2025-12-16 04:51:33,960 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 05:58:44] 2025-12-16 04:51:33,960 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 05:58:44] 2025-12-16 04:51:33,960 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 05:58:44] 2025-12-16 04:51:33,960 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 05:58:44] 2025-12-16 04:51:33,960 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 05:58:44] 2025-12-16 04:51:33,961 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 05:58:44] 2025-12-16 04:51:33,961 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 05:58:44] 2025-12-16 04:51:33,961 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 05:58:44] 2025-12-16 04:51:33,961 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 05:58:44] 2025-12-16 04:51:33,961 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 05:58:44] 2025-12-16 04:51:33,961 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 05:58:44] 2025-12-16 04:51:33,961 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 05:58:44] 2025-12-16 04:51:33,961 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 05:58:44] 2025-12-16 04:51:33,961 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 05:58:44] 2025-12-16 04:51:33,961 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 05:58:44] 2025-12-16 04:51:33,961 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 05:58:44] 2025-12-16 04:51:33,961 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 05:58:44] 2025-12-16 04:51:33,962 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 05:58:44] 2025-12-16 04:51:33,962 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 05:58:44] 2025-12-16 04:51:33,962 | INFO     | job 6929436662 has completed (purged errors)
[2025-12-16 05:58:44] 2025-12-16 04:51:33,962 | INFO     | overall cleanup function is called
[2025-12-16 05:58:44] 2025-12-16 04:51:34,971 | INFO     | --- collectZombieJob: --- 10, [1115125]
[2025-12-16 05:58:44] 2025-12-16 04:51:34,971 | INFO     | zombie collector waiting for pid 1115125
[2025-12-16 05:58:44] 2025-12-16 04:51:34,971 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 05:58:44] 2025-12-16 04:51:34,971 | INFO     | collected zombie processes
[2025-12-16 05:58:44] 2025-12-16 04:51:34,971 | INFO     | will attempt to kill all subprocesses of pid=1115125
[2025-12-16 05:58:44] 2025-12-16 04:51:35,807 | INFO     | process IDs to be killed: [1115125] (in reverse order)
[2025-12-16 05:58:44] 2025-12-16 04:51:36,072 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 05:58:44] 2025-12-16 04:51:36,072 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 05:58:44] 2025-12-16 04:51:36,105 | INFO     | did not find any defunct processes belonging to 1115125
[2025-12-16 05:58:44] 2025-12-16 04:51:36,134 | INFO     | did not find any defunct processes belonging to 1115125
[2025-12-16 05:58:44] 2025-12-16 04:51:36,135 | INFO     | ready for new job
[2025-12-16 05:58:44] 2025-12-16 04:51:36,135 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 05:58:44] 2025-12-16 04:51:36,141 | INFO     | ***************************************
[2025-12-16 05:58:44] 2025-12-16 04:51:36,141 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 05:58:44] 2025-12-16 04:51:36,141 | INFO     | ***************************************
[2025-12-16 05:58:44] 2025-12-16 04:51:36,141 | INFO     | 
[2025-12-16 05:58:44] 2025-12-16 04:51:36,149 | INFO     | architecture information:
[2025-12-16 05:58:44] 2025-12-16 04:51:36,149 | INFO     | executing command: cat /etc/os-release
[2025-12-16 05:58:44] 2025-12-16 04:51:36,175 | INFO     | cat /etc/os-release:
[2025-12-16 05:58:44] NAME="CentOS Linux"
[2025-12-16 05:58:44] VERSION="7 (Core)"
[2025-12-16 05:58:44] ID="centos"
[2025-12-16 05:58:44] ID_LIKE="rhel fedora"
[2025-12-16 05:58:44] VERSION_ID="7"
[2025-12-16 05:58:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 05:58:44] ANSI_COLOR="0;31"
[2025-12-16 05:58:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 05:58:44] HOME_URL="https://www.centos.org/"
[2025-12-16 05:58:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 05:58:44] 
[2025-12-16 05:58:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 05:58:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 05:58:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 05:58:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 05:58:44] 
[2025-12-16 05:58:44] 2025-12-16 04:51:36,176 | INFO     | ***************************************
[2025-12-16 05:58:44] 2025-12-16 04:51:36,676 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2025-12-16 05:58:44] 2025-12-16 04:51:36,702 | INFO     | sufficient remaining disk space (3288632131584 B)
[2025-12-16 05:58:44] 2025-12-16 04:51:36,705 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 05:58:44] 2025-12-16 04:51:36,706 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 05:58:44] 2025-12-16 04:51:36,706 | INFO     | update_server=False
[2025-12-16 05:58:44] 2025-12-16 04:51:36,706 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 05:58:44] 2025-12-16 04:51:36,706 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 05:58:44] 2025-12-16 04:51:36,707 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 05:58:44] 2025-12-16 04:51:36,920 | INFO     | all job control threads have been joined
[2025-12-16 05:58:44] 2025-12-16 04:51:36,983 | INFO     | all data control threads have been joined
[2025-12-16 05:58:44] 2025-12-16 04:51:37,172 | INFO     | all payload control threads have been joined
[2025-12-16 05:58:44] 2025-12-16 04:51:37,604 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 05:58:44] 2025-12-16 04:51:37,604 | INFO     | aborting loop
[2025-12-16 05:58:44] 2025-12-16 04:51:37,711 | INFO     | [job] retrieve thread has finished
[2025-12-16 05:58:44] 2025-12-16 04:51:37,867 | INFO     | [payload] validate_post thread has finished
[2025-12-16 05:58:44] 2025-12-16 04:51:37,870 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 05:58:44] 2025-12-16 04:51:37,926 | INFO     | [job] control thread has finished
[2025-12-16 05:58:44] 2025-12-16 04:51:37,987 | INFO     | [data] control thread has finished
[2025-12-16 05:58:44] 2025-12-16 04:51:38,080 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 05:58:44] 2025-12-16 04:51:38,173 | INFO     | [payload] control thread has finished
[2025-12-16 05:58:44] 2025-12-16 04:51:38,609 | INFO     | [job] job monitor thread has finished
[2025-12-16 05:58:44] 2025-12-16 04:51:38,712 | INFO     | [data] copytool_out thread has finished
[2025-12-16 05:58:44] 2025-12-16 04:51:38,739 | INFO     | [payload] failed_post thread has finished
[2025-12-16 05:58:44] 2025-12-16 04:51:38,913 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 05:58:44] 2025-12-16 04:51:38,997 | INFO     | [job] validate thread has finished
[2025-12-16 05:58:44] 2025-12-16 04:51:39,003 | INFO     | [data] copytool_in thread has finished
[2025-12-16 05:58:44] 2025-12-16 04:51:39,194 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 05:58:44] 2025-12-16 04:51:39,918 | INFO     | [job] queue monitor thread has finished
[2025-12-16 05:58:44] 2025-12-16 04:51:40,713 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 05:58:44] 2025-12-16 04:51:47,345 | INFO     | job.realtimelogging is not enabled
[2025-12-16 05:58:44] 2025-12-16 04:51:48,350 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 05:58:44] 2025-12-16 04:52:04,377 | INFO     | [monitor] cgroup control has ended
[2025-12-16 05:58:44] 2025-12-16 04:52:05,797 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22966023063360)>', '<ExcThread(monitor, started 22965705987840)>']
[2025-12-16 05:58:44] 2025-12-16 04:52:06,506 | INFO     | PID=1099551 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 05:58:44] 2025-12-16 04:52:06,506 | INFO     | .. there are 8 such processes running
[2025-12-16 05:58:44] 2025-12-16 04:52:06,506 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 05:58:44] 2025-12-16 04:52:06,506 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 05:58:44] 2025-12-16 04:52:06,506 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 05:58:44] 2025-12-16 04:52:06,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 05:58:44] 2025-12-16 04:52:06,506 | INFO     | [monitor] control thread has ended
[2025-12-16 05:58:44] 2025-12-16 04:52:10,823 | INFO     | all workflow threads have been joined
[2025-12-16 05:58:44] 2025-12-16 04:52:10,823 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 05:58:44] 2025-12-16 04:52:10,824 | INFO     | traces error code: 0
[2025-12-16 05:58:44] 2025-12-16 04:52:10,824 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 05:58:44] 2025-12-16 04:52:10,990 [wrapper] ==== pilot stdout END ====
[2025-12-16 05:58:44] 2025-12-16 04:52:10,994 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 05:58:44] 2025-12-16 04:52:10,998 [wrapper] pilotpid: 1099551
[2025-12-16 05:58:44] 2025-12-16 04:52:11,003 [wrapper] Pilot exit status: 0
[2025-12-16 05:58:44] 2025-12-16 04:52:11,018 [wrapper] pandaids: 6929436662
[2025-12-16 05:58:44] 2025-12-16 04:52:11,194 [wrapper] cleanup supervisor_pilot 1559871 1099552
[2025-12-16 05:58:44] 2025-12-16 04:52:11,199 [wrapper] Test setup, not cleaning
[2025-12-16 05:58:44] 2025-12-16 04:52:11,203 [wrapper] apfmon messages muted
[2025-12-16 05:58:44] 2025-12-16 04:52:11,207 [wrapper] ==== wrapper stdout END ====
[2025-12-16 05:58:44] 2025-12-16 04:52:11,211 [wrapper] ==== wrapper stderr END ====
[2025-12-16 05:58:44]  *** Error codes and diagnostics ***
[2025-12-16 05:58:44]     "exeErrorCode": 0,
[2025-12-16 05:58:44]     "exeErrorDiag": "",
[2025-12-16 05:58:44]     "pilotErrorCode": 0,
[2025-12-16 05:58:44]     "pilotErrorDiag": "",
[2025-12-16 05:58:44]  *** Listing of results directory ***
[2025-12-16 05:58:44] total 449756
[2025-12-16 05:58:44] -rw-r--r-- 1 boinc boinc      5112 Dec 14 08:47 queuedata.json
[2025-12-16 05:58:44] -rw-r--r-- 1 boinc boinc    579449 Dec 14 08:47 pilot3.tar.gz
[2025-12-16 05:58:44] -rwx------ 1 boinc boinc     36322 Dec 14 08:47 runpilot2-wrapper.sh
[2025-12-16 05:58:44] -rw-r--r-- 1 boinc boinc       100 Dec 16 01:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 05:58:44] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 01:52 run_atlas
[2025-12-16 05:58:44] -rw-r--r-- 1 boinc boinc       105 Dec 16 01:52 job.xml
[2025-12-16 05:58:44] -rw-r--r-- 2 boinc boinc 224097166 Dec 16 01:52 EVNT.47898761._000339.pool.root.1
[2025-12-16 05:58:44] -rw-r--r-- 1 boinc boinc      6691 Dec 16 01:52 init_data.xml
[2025-12-16 05:58:44] -rw-r--r-- 2 boinc boinc     15847 Dec 16 01:52 start_atlas.sh
[2025-12-16 05:58:44] drwxrwx--x 2 boinc boinc      4096 Dec 16 01:52 shared
[2025-12-16 05:58:44] -rw-r--r-- 2 boinc boinc    592399 Dec 16 01:52 input.tar.gz
[2025-12-16 05:58:44] -rw-r--r-- 1 boinc boinc         0 Dec 16 01:52 boinc_lockfile
[2025-12-16 05:58:44] -rw-r--r-- 1 boinc boinc      2504 Dec 16 01:52 pandaJob.out
[2025-12-16 05:58:44] -rw------- 1 boinc boinc    994539 Dec 16 01:52 agis_schedconf.cvmfs.json
[2025-12-16 05:58:44] drwx------ 5 boinc boinc      4096 Dec 16 01:52 pilot3
[2025-12-16 05:58:44] -rw-r--r-- 1 boinc boinc       528 Dec 16 05:50 boinc_task_state.xml
[2025-12-16 05:58:44] -rw------- 1 boinc boinc 227782538 Dec 16 05:50 HITS.47898763._008457.pool.root.1
[2025-12-16 05:58:44] -rw------- 1 boinc boinc        95 Dec 16 05:51 pilot_heartbeat.json
[2025-12-16 05:58:44] -rw------- 1 boinc boinc      1034 Dec 16 05:51 memory_monitor_summary.json
[2025-12-16 05:58:44] -rw------- 1 boinc boinc   1516240 Dec 16 05:51 agis_ddmendpoints.agis.ALL.json
[2025-12-16 05:58:44] -rw------- 1 boinc boinc    395375 Dec 16 05:51 log.47898763._008457.job.log.tgz.1
[2025-12-16 05:58:44] -rw------- 1 boinc boinc      7788 Dec 16 05:51 heartbeat.json
[2025-12-16 05:58:44] -rw------- 1 boinc boinc      4907 Dec 16 05:52 pilotlog.txt
[2025-12-16 05:58:44] -rw------- 1 boinc boinc   1983967 Dec 16 05:52 log.47898763._008457.job.log.1
[2025-12-16 05:58:44] -rw------- 1 boinc boinc       357 Dec 16 05:52 output.list
[2025-12-16 05:58:44] -rw-r--r-- 1 boinc boinc       620 Dec 16 05:52 runtime_log
[2025-12-16 05:58:44] -rw------- 1 boinc boinc   2396160 Dec 16 05:52 result.tar.gz
[2025-12-16 05:58:44] -rw-r--r-- 1 boinc boinc      9223 Dec 16 05:52 runtime_log.err
[2025-12-16 05:58:44] -rw------- 1 boinc boinc       666 Dec 16 05:52 5tJNDm2zvo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmc1UKDmhvRdOn.diag
[2025-12-16 05:58:44] -rw-r--r-- 1 boinc boinc        26 Dec 16 05:58 wrapper_checkpoint.txt
[2025-12-16 05:58:44] -rw-r--r-- 1 boinc boinc      8192 Dec 16 05:58 boinc_mmap_file
[2025-12-16 05:58:44] -rw-r--r-- 1 boinc boinc     20873 Dec 16 05:58 stderr.txt
[2025-12-16 05:58:44] HITS file was successfully produced:
[2025-12-16 05:58:44] -rw------- 1 boinc boinc 227782538 Dec 16 05:50 shared/HITS.pool.root.1
[2025-12-16 05:58:44]  *** Contents of shared directory: ***
[2025-12-16 05:58:44] total 444232
[2025-12-16 05:58:44] -rw-r--r-- 2 boinc boinc 224097166 Dec 16 01:52 ATLAS.root_0
[2025-12-16 05:58:44] -rw-r--r-- 2 boinc boinc     15847 Dec 16 01:52 start_atlas.sh
[2025-12-16 05:58:44] -rw-r--r-- 2 boinc boinc    592399 Dec 16 01:52 input.tar.gz
[2025-12-16 05:58:44] -rw------- 1 boinc boinc 227782538 Dec 16 05:50 HITS.pool.root.1
[2025-12-16 05:58:44] -rw------- 1 boinc boinc   2396160 Dec 16 05:52 result.tar.gz
05:58:45 (1091907): run_atlas exited; CPU time 56328.305845
05:58:45 (1091907): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN