Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:58:54 (1590223): wrapper (7.7.26015): starting
05:58:54 (1590223): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 05:58:54] Arguments: --nthreads 4
[2025-12-16 05:58:54] Threads: 4
[2025-12-16 05:58:54] Checking for CVMFS
[2025-12-16 05:58:54] No cvmfs_config command found, will try listing directly
[2025-12-16 05:58:54] CVMFS is ok
[2025-12-16 05:58:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 05:58:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 05:58:54] Further information can be found at the LHC@home message board.
[2025-12-16 05:58:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 05:58:54] Checking for apptainer binary...
[2025-12-16 05:58:54] which: no apptainer in ((null))
[2025-12-16 05:58:54] apptainer is not installed, using version from CVMFS
[2025-12-16 05:58:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 05:58:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-12-16 05:58:54] apptainer works
[2025-12-16 05:58:54] Set ATHENA_PROC_NUMBER=4
[2025-12-16 05:58:54] Set ATHENA_CORE_NUMBER=4
[2025-12-16 05:58:54] Starting ATLAS job with PandaID=6929432015
[2025-12-16 05:58:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 09:48:44]  *** The last 200 lines of the pilot log: ***
[2025-12-16 09:48:44] 2025-12-16 08:43:53,038 | INFO     | using path: /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6929432015/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 09:48:44] 2025-12-16 08:43:53,039 | INFO     | extracted standard info from prmon json
[2025-12-16 09:48:44] 2025-12-16 08:43:53,039 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 09:48:44] 2025-12-16 08:43:53,039 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 09:48:44] 2025-12-16 08:43:53,039 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 09:48:44] 2025-12-16 08:43:53,039 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 09:48:44] 2025-12-16 08:43:53,044 | INFO     | fitting pss+swap vs Time
[2025-12-16 09:48:44] 2025-12-16 08:43:53,044 | INFO     | sum of square deviations: 3346927870.0
[2025-12-16 09:48:44] 2025-12-16 08:43:53,046 | INFO     | sum of deviations: 6752973584.999996
[2025-12-16 09:48:44] 2025-12-16 08:43:53,046 | INFO     | mean x: 1765867892.0
[2025-12-16 09:48:44] 2025-12-16 08:43:53,046 | INFO     | mean y: 2312925.511312217
[2025-12-16 09:48:44] 2025-12-16 08:43:53,046 | INFO     | intersect: -3560613941.2919536
[2025-12-16 09:48:44] 2025-12-16 08:43:53,046 | INFO     | chi2: 2.0719254124582616
[2025-12-16 09:48:44] 2025-12-16 08:43:53,047 | INFO     | sum of square deviations: 3124858590.0
[2025-12-16 09:48:44] 2025-12-16 08:43:53,048 | INFO     | sum of deviations: 20149283289.500004
[2025-12-16 09:48:44] 2025-12-16 08:43:53,049 | INFO     | mean x: 1765867739.5
[2025-12-16 09:48:44] 2025-12-16 08:43:53,049 | INFO     | mean y: 2321951.967592593
[2025-12-16 09:48:44] 2025-12-16 08:43:53,049 | INFO     | intersect: -11384103484.638964
[2025-12-16 09:48:44] 2025-12-16 08:43:53,049 | INFO     | chi2: 1.286150255768693
[2025-12-16 09:48:44] 2025-12-16 08:43:53,049 | INFO     | current chi2=1.286150255768693 (change=37.92487663719882 %)
[2025-12-16 09:48:44] 2025-12-16 08:43:53,050 | INFO     | sum of square deviations: 2912836010.0
[2025-12-16 09:48:44] 2025-12-16 08:43:53,051 | INFO     | sum of deviations: 19519678896.0
[2025-12-16 09:48:44] 2025-12-16 08:43:53,051 | INFO     | mean x: 1765867587.0
[2025-12-16 09:48:44] 2025-12-16 08:43:53,051 | INFO     | mean y: 2321499.0710900472
[2025-12-16 09:48:44] 2025-12-16 08:43:53,051 | INFO     | intersect: -11831220846.862192
[2025-12-16 09:48:44] 2025-12-16 08:43:53,052 | INFO     | chi2: 1.2868250990682568
[2025-12-16 09:48:44] 2025-12-16 08:43:53,052 | INFO     | current chi2=1.2868250990682568 (change=-0.052470020243510766 %)
[2025-12-16 09:48:44] 2025-12-16 08:43:53,052 | INFO     | right removable region: 210
[2025-12-16 09:48:44] 2025-12-16 08:43:53,052 | INFO     | sum of square deviations: 3124858590.0
[2025-12-16 09:48:44] 2025-12-16 08:43:53,054 | INFO     | sum of deviations: -17502330205.999996
[2025-12-16 09:48:44] 2025-12-16 08:43:53,054 | INFO     | mean x: 1765868044.5
[2025-12-16 09:48:44] 2025-12-16 08:43:53,054 | INFO     | mean y: 2329345.212962963
[2025-12-16 09:48:44] 2025-12-16 08:43:53,054 | INFO     | intersect: 9892954704.699228
[2025-12-16 09:48:44] 2025-12-16 08:43:53,054 | INFO     | chi2: 0.8446919687847436
[2025-12-16 09:48:44] 2025-12-16 08:43:53,054 | INFO     | current chi2=0.8446919687847436 (change=59.23154551289815 %)
[2025-12-16 09:48:44] 2025-12-16 08:43:53,055 | INFO     | sum of square deviations: 2912836010.0
[2025-12-16 09:48:44] 2025-12-16 08:43:53,056 | INFO     | sum of deviations: -12536125799.000002
[2025-12-16 09:48:44] 2025-12-16 08:43:53,056 | INFO     | mean x: 1765868197.0
[2025-12-16 09:48:44] 2025-12-16 08:43:53,056 | INFO     | mean y: 2325769.3601895734
[2025-12-16 09:48:44] 2025-12-16 08:43:53,057 | INFO     | intersect: 7602185763.553723
[2025-12-16 09:48:44] 2025-12-16 08:43:53,057 | INFO     | chi2: 0.8280223637565595
[2025-12-16 09:48:44] 2025-12-16 08:43:53,057 | INFO     | current chi2=0.8280223637565595 (change=1.9734537138037047 %)
[2025-12-16 09:48:44] 2025-12-16 08:43:53,057 | INFO     | left removable region: 20
[2025-12-16 09:48:44] 2025-12-16 08:43:53,057 | INFO     | sum of square deviations: 2126802667.5
[2025-12-16 09:48:44] 2025-12-16 08:43:53,059 | INFO     | sum of deviations: 3822840415.0000005
[2025-12-16 09:48:44] 2025-12-16 08:43:53,059 | INFO     | mean x: 1765868166.5
[2025-12-16 09:48:44] 2025-12-16 08:43:53,059 | INFO     | mean y: 2332612.4631578946
[2025-12-16 09:48:44] 2025-12-16 08:43:53,059 | INFO     | intersect: -3171742866.0076957
[2025-12-16 09:48:44] 2025-12-16 08:43:53,059 | INFO     | chi2: 0.0005534719330504822
[2025-12-16 09:48:44] 2025-12-16 08:43:53,059 | INFO     | current memory leak: 1.80 B/s (using 190 data points, chi2=0.00)
[2025-12-16 09:48:44] 2025-12-16 08:43:53,060 | INFO     | could have reported an average CPU frequency of 2718 MHz (11 samples)
[2025-12-16 09:48:44] 2025-12-16 08:43:53,060 | INFO     | ..............................
[2025-12-16 09:48:44] 2025-12-16 08:43:53,060 | INFO     | . Timing measurements:
[2025-12-16 09:48:44] 2025-12-16 08:43:53,060 | INFO     | . get job = 0 s
[2025-12-16 09:48:44] 2025-12-16 08:43:53,060 | INFO     | . initial setup = 1 s
[2025-12-16 09:48:44] 2025-12-16 08:43:53,060 | INFO     | . payload setup = 8 s
[2025-12-16 09:48:44] 2025-12-16 08:43:53,061 | INFO     | . stage-in = 0 s
[2025-12-16 09:48:44] 2025-12-16 08:43:53,061 | INFO     | . payload execution = 13446 s
[2025-12-16 09:48:44] 2025-12-16 08:43:53,061 | INFO     | . stage-out = 1 s
[2025-12-16 09:48:44] 2025-12-16 08:43:53,061 | INFO     | . log creation = 0 s
[2025-12-16 09:48:44] 2025-12-16 08:43:53,061 | INFO     | ..............................
[2025-12-16 09:48:44] 2025-12-16 08:43:53,161 | INFO     | 
[2025-12-16 09:48:44] 2025-12-16 08:43:53,164 | INFO     | job summary report
[2025-12-16 09:48:44] 2025-12-16 08:43:53,164 | INFO     | --------------------------------------------------
[2025-12-16 09:48:44] 2025-12-16 08:43:53,164 | INFO     | PanDA job id: 6929432015
[2025-12-16 09:48:44] 2025-12-16 08:43:53,164 | INFO     | task id: 47898826
[2025-12-16 09:48:44] 2025-12-16 08:43:53,164 | INFO     | errors: (none)
[2025-12-16 09:48:44] 2025-12-16 08:43:53,164 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 09:48:44] 2025-12-16 08:43:53,164 | INFO     | pilot state: finished 
[2025-12-16 09:48:44] 2025-12-16 08:43:53,165 | INFO     | transexitcode: 0
[2025-12-16 09:48:44] 2025-12-16 08:43:53,165 | INFO     | exeerrorcode: 0
[2025-12-16 09:48:44] 2025-12-16 08:43:53,165 | INFO     | exeerrordiag: 
[2025-12-16 09:48:44] 2025-12-16 08:43:53,165 | INFO     | exitcode: 0
[2025-12-16 09:48:44] 2025-12-16 08:43:53,165 | INFO     | exitmsg: OK
[2025-12-16 09:48:44] 2025-12-16 08:43:53,165 | INFO     | cpuconsumptiontime: 51877 s
[2025-12-16 09:48:44] 2025-12-16 08:43:53,165 | INFO     | nevents: 400
[2025-12-16 09:48:44] 2025-12-16 08:43:53,165 | INFO     | neventsw: 0
[2025-12-16 09:48:44] 2025-12-16 08:43:53,165 | INFO     | pid: 1603534
[2025-12-16 09:48:44] 2025-12-16 08:43:53,165 | INFO     | pgrp: 1603534
[2025-12-16 09:48:44] 2025-12-16 08:43:53,165 | INFO     | corecount: 4
[2025-12-16 09:48:44] 2025-12-16 08:43:53,165 | INFO     | event service: False
[2025-12-16 09:48:44] 2025-12-16 08:43:53,166 | INFO     | sizes: {0: 2283797, 1: 2283996, 7: 2284258, 11: 2284286, 13458: 2315223, 13460: 2324429, 13466: 2324567}
[2025-12-16 09:48:44] 2025-12-16 08:43:53,166 | INFO     | --------------------------------------------------
[2025-12-16 09:48:44] 2025-12-16 08:43:53,166 | INFO     | 
[2025-12-16 09:48:44] 2025-12-16 08:43:53,166 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2025-12-16 09:48:44] 2025-12-16 08:43:53,198 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 09:48:44] 2025-12-16 08:43:53,198 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 09:48:44] 2025-12-16 08:43:53,199 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 09:48:44] 2025-12-16 08:43:53,199 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 09:48:44] 2025-12-16 08:43:53,199 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 09:48:44] 2025-12-16 08:43:53,199 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 09:48:44] 2025-12-16 08:43:53,199 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 09:48:44] 2025-12-16 08:43:53,199 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 09:48:44] 2025-12-16 08:43:53,199 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 09:48:44] 2025-12-16 08:43:53,199 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 09:48:44] 2025-12-16 08:43:53,199 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 09:48:44] 2025-12-16 08:43:53,199 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 09:48:44] 2025-12-16 08:43:53,200 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 09:48:44] 2025-12-16 08:43:53,200 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 09:48:44] 2025-12-16 08:43:53,200 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 09:48:44] 2025-12-16 08:43:53,200 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 09:48:44] 2025-12-16 08:43:53,200 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 09:48:44] 2025-12-16 08:43:53,200 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 09:48:44] 2025-12-16 08:43:53,200 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 09:48:44] 2025-12-16 08:43:53,200 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 09:48:44] 2025-12-16 08:43:53,200 | INFO     | job 6929432015 has completed (purged errors)
[2025-12-16 09:48:44] 2025-12-16 08:43:53,201 | INFO     | overall cleanup function is called
[2025-12-16 09:48:44] 2025-12-16 08:43:54,205 | INFO     | --- collectZombieJob: --- 10, [1603534]
[2025-12-16 09:48:44] 2025-12-16 08:43:54,205 | INFO     | zombie collector waiting for pid 1603534
[2025-12-16 09:48:44] 2025-12-16 08:43:54,205 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 09:48:44] 2025-12-16 08:43:54,205 | INFO     | collected zombie processes
[2025-12-16 09:48:44] 2025-12-16 08:43:54,205 | INFO     | will attempt to kill all subprocesses of pid=1603534
[2025-12-16 09:48:44] 2025-12-16 08:43:55,007 | INFO     | process IDs to be killed: [1603534] (in reverse order)
[2025-12-16 09:48:44] 2025-12-16 08:43:55,256 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 09:48:44] 2025-12-16 08:43:55,256 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 09:48:44] 2025-12-16 08:43:55,290 | INFO     | did not find any defunct processes belonging to 1603534
[2025-12-16 09:48:44] 2025-12-16 08:43:55,320 | INFO     | did not find any defunct processes belonging to 1603534
[2025-12-16 09:48:44] 2025-12-16 08:43:55,320 | INFO     | ready for new job
[2025-12-16 09:48:44] 2025-12-16 08:43:55,320 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 09:48:44] 2025-12-16 08:43:55,323 | INFO     | ***************************************
[2025-12-16 09:48:44] 2025-12-16 08:43:55,323 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 09:48:44] 2025-12-16 08:43:55,323 | INFO     | ***************************************
[2025-12-16 09:48:44] 2025-12-16 08:43:55,323 | INFO     | 
[2025-12-16 09:48:44] 2025-12-16 08:43:55,332 | INFO     | architecture information:
[2025-12-16 09:48:44] 2025-12-16 08:43:55,332 | INFO     | executing command: cat /etc/os-release
[2025-12-16 09:48:44] 2025-12-16 08:43:55,353 | INFO     | cat /etc/os-release:
[2025-12-16 09:48:44] NAME="CentOS Linux"
[2025-12-16 09:48:44] VERSION="7 (Core)"
[2025-12-16 09:48:44] ID="centos"
[2025-12-16 09:48:44] ID_LIKE="rhel fedora"
[2025-12-16 09:48:44] VERSION_ID="7"
[2025-12-16 09:48:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 09:48:44] ANSI_COLOR="0;31"
[2025-12-16 09:48:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 09:48:44] HOME_URL="https://www.centos.org/"
[2025-12-16 09:48:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 09:48:44] 
[2025-12-16 09:48:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 09:48:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 09:48:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 09:48:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 09:48:44] 
[2025-12-16 09:48:44] 2025-12-16 08:43:55,353 | INFO     | ***************************************
[2025-12-16 09:48:44] 2025-12-16 08:43:55,856 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2025-12-16 09:48:44] 2025-12-16 08:43:55,882 | INFO     | sufficient remaining disk space (3273803169792 B)
[2025-12-16 09:48:44] 2025-12-16 08:43:55,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 09:48:44] 2025-12-16 08:43:55,882 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 09:48:44] 2025-12-16 08:43:55,883 | INFO     | update_server=False
[2025-12-16 09:48:44] 2025-12-16 08:43:55,883 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 09:48:44] 2025-12-16 08:43:56,048 | INFO     | all data control threads have been joined
[2025-12-16 09:48:44] 2025-12-16 08:43:56,215 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-16 09:48:44] 2025-12-16 08:43:56,215 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-16 09:48:44] 2025-12-16 08:43:56,215 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 09:48:44] 2025-12-16 08:43:56,215 | INFO     | will abort loop
[2025-12-16 09:48:44] 2025-12-16 08:43:56,329 | INFO     | all payload control threads have been joined
[2025-12-16 09:48:44] 2025-12-16 08:43:56,557 | INFO     | all job control threads have been joined
[2025-12-16 09:48:44] 2025-12-16 08:43:56,888 | INFO     | [job] retrieve thread has finished
[2025-12-16 09:48:44] 2025-12-16 08:43:56,902 | INFO     | [payload] failed_post thread has finished
[2025-12-16 09:48:44] 2025-12-16 08:43:56,945 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 09:48:44] 2025-12-16 08:43:57,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 09:48:44] 2025-12-16 08:43:57,053 | INFO     | [data] control thread has finished
[2025-12-16 09:48:44] 2025-12-16 08:43:57,220 | INFO     | [job] job monitor thread has finished
[2025-12-16 09:48:44] 2025-12-16 08:43:57,290 | INFO     | [payload] validate_post thread has finished
[2025-12-16 09:48:44] 2025-12-16 08:43:57,319 | INFO     | [data] copytool_in thread has finished
[2025-12-16 09:48:44] 2025-12-16 08:43:57,334 | INFO     | [payload] control thread has finished
[2025-12-16 09:48:44] 2025-12-16 08:43:57,562 | INFO     | [job] control thread has finished
[2025-12-16 09:48:44] 2025-12-16 08:43:57,695 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 09:48:44] 2025-12-16 08:43:57,748 | INFO     | [job] validate thread has finished
[2025-12-16 09:48:44] 2025-12-16 08:43:58,107 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 09:48:44] 2025-12-16 08:43:58,170 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 09:48:44] 2025-12-16 08:43:58,183 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 09:48:44] 2025-12-16 08:43:58,950 | INFO     | [data] copytool_out thread has finished
[2025-12-16 09:48:44] 2025-12-16 08:43:59,175 | INFO     | [job] queue monitor thread has finished
[2025-12-16 09:48:44] 2025-12-16 08:44:01,038 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 09:48:44] 2025-12-16 08:44:06,238 | INFO     | job.realtimelogging is not enabled
[2025-12-16 09:48:44] 2025-12-16 08:44:06,787 [wrapper] supervise_pilot (15 min periods counter: 16)
[2025-12-16 09:48:44] 2025-12-16 08:44:07,240 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 09:48:44] 2025-12-16 08:44:25,440 | INFO     | PID=1596138 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 09:48:44] 2025-12-16 08:44:25,441 | INFO     | .. there are 8 such processes running
[2025-12-16 09:48:44] 2025-12-16 08:44:25,441 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 09:48:44] 2025-12-16 08:44:25,441 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 09:48:44] 2025-12-16 08:44:25,441 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 09:48:44] 2025-12-16 08:44:30,476 | INFO     | [monitor] cgroup control has ended
[2025-12-16 09:48:44] 2025-12-16 08:44:31,920 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22706787645248)>', '<ExcThread(monitor, started 22706198112000)>']
[2025-12-16 09:48:44] 2025-12-16 08:44:32,478 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 09:48:44] 2025-12-16 08:44:32,478 | INFO     | [monitor] control thread has ended
[2025-12-16 09:48:44] 2025-12-16 08:44:36,945 | INFO     | all workflow threads have been joined
[2025-12-16 09:48:44] 2025-12-16 08:44:36,945 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 09:48:44] 2025-12-16 08:44:36,945 | INFO     | traces error code: 0
[2025-12-16 09:48:44] 2025-12-16 08:44:36,945 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 09:48:44] 2025-12-16 08:44:37,085 [wrapper] ==== pilot stdout END ====
[2025-12-16 09:48:44] 2025-12-16 08:44:37,089 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 09:48:44] 2025-12-16 08:44:37,093 [wrapper] pilotpid: 1596138
[2025-12-16 09:48:44] 2025-12-16 08:44:37,097 [wrapper] Pilot exit status: 0
[2025-12-16 09:48:44] 2025-12-16 08:44:37,115 [wrapper] pandaids: 6929432015
[2025-12-16 09:48:44] 2025-12-16 08:44:37,301 [wrapper] cleanup supervisor_pilot 2010291 1596139
[2025-12-16 09:48:44] 2025-12-16 08:44:37,305 [wrapper] Test setup, not cleaning
[2025-12-16 09:48:44] 2025-12-16 08:44:37,311 [wrapper] apfmon messages muted
[2025-12-16 09:48:44] 2025-12-16 08:44:37,315 [wrapper] ==== wrapper stdout END ====
[2025-12-16 09:48:44] 2025-12-16 08:44:37,318 [wrapper] ==== wrapper stderr END ====
[2025-12-16 09:48:44]  *** Error codes and diagnostics ***
[2025-12-16 09:48:44]     "exeErrorCode": 0,
[2025-12-16 09:48:44]     "exeErrorDiag": "",
[2025-12-16 09:48:44]     "pilotErrorCode": 0,
[2025-12-16 09:48:44]     "pilotErrorDiag": "",
[2025-12-16 09:48:44]  *** Listing of results directory ***
[2025-12-16 09:48:44] total 445172
[2025-12-16 09:48:44] -rw-r--r-- 1 boinc boinc    579449 Dec 14 05:46 pilot3.tar.gz
[2025-12-16 09:48:44] -rwx------ 1 boinc boinc     36322 Dec 14 05:47 runpilot2-wrapper.sh
[2025-12-16 09:48:44] -rw-r--r-- 1 boinc boinc      5112 Dec 14 05:48 queuedata.json
[2025-12-16 09:48:44] -rw-r--r-- 1 boinc boinc       100 Dec 16 05:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 09:48:44] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 05:58 run_atlas
[2025-12-16 09:48:44] -rw-r--r-- 1 boinc boinc       105 Dec 16 05:58 job.xml
[2025-12-16 09:48:44] -rw-r--r-- 2 boinc boinc 225527728 Dec 16 05:58 EVNT.47898824._000017.pool.root.1
[2025-12-16 09:48:44] -rw-r--r-- 1 boinc boinc      6691 Dec 16 05:58 init_data.xml
[2025-12-16 09:48:44] -rw-r--r-- 2 boinc boinc     15847 Dec 16 05:58 start_atlas.sh
[2025-12-16 09:48:44] drwxrwx--x 2 boinc boinc      4096 Dec 16 05:58 shared
[2025-12-16 09:48:44] -rw-r--r-- 2 boinc boinc    592392 Dec 16 05:58 input.tar.gz
[2025-12-16 09:48:44] -rw-r--r-- 1 boinc boinc         0 Dec 16 05:58 boinc_lockfile
[2025-12-16 09:48:44] -rw-r--r-- 1 boinc boinc      2511 Dec 16 05:58 pandaJob.out
[2025-12-16 09:48:44] -rw------- 1 boinc boinc    994531 Dec 16 05:59 agis_schedconf.cvmfs.json
[2025-12-16 09:48:44] drwx------ 5 boinc boinc      4096 Dec 16 05:59 pilot3
[2025-12-16 09:48:44] -rw------- 1 boinc boinc 221876976 Dec 16 09:43 HITS.47898826._000356.pool.root.1
[2025-12-16 09:48:44] -rw-r--r-- 1 boinc boinc       528 Dec 16 09:43 boinc_task_state.xml
[2025-12-16 09:48:44] -rw------- 1 boinc boinc        95 Dec 16 09:43 pilot_heartbeat.json
[2025-12-16 09:48:44] -rw------- 1 boinc boinc      1029 Dec 16 09:43 memory_monitor_summary.json
[2025-12-16 09:48:44] -rw------- 1 boinc boinc   1516240 Dec 16 09:43 agis_ddmendpoints.agis.ALL.json
[2025-12-16 09:48:44] -rw------- 1 boinc boinc    382390 Dec 16 09:43 log.47898826._000356.job.log.tgz.1
[2025-12-16 09:48:44] -rw------- 1 boinc boinc      7783 Dec 16 09:43 heartbeat.json
[2025-12-16 09:48:44] -rw------- 1 boinc boinc      5093 Dec 16 09:44 pilotlog.txt
[2025-12-16 09:48:44] -rw------- 1 boinc boinc   1880593 Dec 16 09:44 log.47898826._000356.job.log.1
[2025-12-16 09:48:44] -rw------- 1 boinc boinc       357 Dec 16 09:44 output.list
[2025-12-16 09:48:44] -rw-r--r-- 1 boinc boinc       620 Dec 16 09:44 runtime_log
[2025-12-16 09:48:44] -rw------- 1 boinc boinc   2283520 Dec 16 09:44 result.tar.gz
[2025-12-16 09:48:44] -rw-r--r-- 1 boinc boinc      9223 Dec 16 09:44 runtime_log.err
[2025-12-16 09:48:44] -rw------- 1 boinc boinc       666 Dec 16 09:44 ON2MDmMCto8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfsUKDmIRTRwn.diag
[2025-12-16 09:48:44] -rw-r--r-- 1 boinc boinc        26 Dec 16 09:48 wrapper_checkpoint.txt
[2025-12-16 09:48:44] -rw-r--r-- 1 boinc boinc      8192 Dec 16 09:48 boinc_mmap_file
[2025-12-16 09:48:44] -rw-r--r-- 1 boinc boinc     20843 Dec 16 09:48 stderr.txt
[2025-12-16 09:48:44] HITS file was successfully produced:
[2025-12-16 09:48:44] -rw------- 1 boinc boinc 221876976 Dec 16 09:43 shared/HITS.pool.root.1
[2025-12-16 09:48:44]  *** Contents of shared directory: ***
[2025-12-16 09:48:44] total 439760
[2025-12-16 09:48:44] -rw-r--r-- 2 boinc boinc 225527728 Dec 16 05:58 ATLAS.root_0
[2025-12-16 09:48:44] -rw-r--r-- 2 boinc boinc     15847 Dec 16 05:58 start_atlas.sh
[2025-12-16 09:48:44] -rw-r--r-- 2 boinc boinc    592392 Dec 16 05:58 input.tar.gz
[2025-12-16 09:48:44] -rw------- 1 boinc boinc 221876976 Dec 16 09:43 HITS.pool.root.1
[2025-12-16 09:48:44] -rw------- 1 boinc boinc   2283520 Dec 16 09:44 result.tar.gz
09:48:45 (1590223): run_atlas exited; CPU time 52801.488755
09:48:45 (1590223): called boinc_finish(0)

</stderr_txt>
]]>

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