Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:13:00 (5536): wrapper (7.7.26015): starting
17:13:00 (5536): wrapper: running run_atlas (--nthreads 12)
[2025-12-14 17:13:00] Arguments: --nthreads 12
[2025-12-14 17:13:00] Threads: 12
[2025-12-14 17:13:00] Checking for CVMFS
[2025-12-14 17:13:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 17:13:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 17:13:00] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 17:13:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 17:13:00] 2.11.2.0 22587 28728 90524 154008 0 59 12369169 20275201 1 130560 0 9961502 99.896 1855382 41249 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 17:13:00] CVMFS is ok
[2025-12-14 17:13:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 17:13:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 17:13:00] Further information can be found at the LHC@home message board.
[2025-12-14 17:13:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 17:13:00] Checking for apptainer binary...
[2025-12-14 17:13:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 17:13:00] Running /usr/bin/apptainer --version
[2025-12-14 17:13:00] apptainer version 1.3.2-1.el7
[2025-12-14 17:13:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 17:13:01] c-205-13.aglt2.org
[2025-12-14 17:13:01] apptainer works
[2025-12-14 17:13:02] Set ATHENA_PROC_NUMBER=12
[2025-12-14 17:13:02] Set ATHENA_CORE_NUMBER=12
[2025-12-14 17:13:02] Starting ATLAS job with PandaID=6929449726
[2025-12-14 17:13:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 18:32:34]  *** The last 200 lines of the pilot log: ***
[2025-12-14 18:32:34]  protocol_id=None
[2025-12-14 18:32:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-14 18:32:34]  replicas=None
[2025-12-14 18:32:34]  scope=mc23_13p6TeV
[2025-12-14 18:32:34]  status=None
[2025-12-14 18:32:34]  status_code=0
[2025-12-14 18:32:34]  storage_token=
[2025-12-14 18:32:34]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6929449726/log.47886933._003329.job.log.tgz.1
[2025-12-14 18:32:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/1d/log.47886933._003329.job.log.tgz.1
[2025-12-14 18:32:34]  workdir=None
[2025-12-14 18:32:34] ]
[2025-12-14 18:32:34] 2025-12-14 23:31:56,364 | INFO     | transferring file log.47886933._003329.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6929449726/log.47886933._003329.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-14 18:32:34] 2025-12-14 23:31:56,364 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6929449726/log.47886933._003329.job.log.tgz.1 /tmp/boinchome/slots/0/log.47886933._003329.job
[2025-12-14 18:32:34] 2025-12-14 23:31:56,386 | INFO     | adding to output.list: log.47886933._003329.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/1d/log.47886933._003329.job.log.tg
[2025-12-14 18:32:34] 2025-12-14 23:31:56,387 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-14 18:32:34] 2025-12-14 23:31:56,387 | INFO     | summary of transferred files:
[2025-12-14 18:32:34] 2025-12-14 23:31:56,387 | INFO     |  -- lfn=log.47886933._003329.job.log.tgz.1, status_code=0, status=transferred
[2025-12-14 18:32:34] 2025-12-14 23:31:56,387 | INFO     | stage-out finished correctly
[2025-12-14 18:32:34] 2025-12-14 23:31:56,468 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-14 18:32:34] 2025-12-14 23:31:56,546 | INFO     | job 6929449726 has state=finished
[2025-12-14 18:32:34] 2025-12-14 23:31:56,546 | INFO     | preparing for final server update for job 6929449726 in state='finished'
[2025-12-14 18:32:34] 2025-12-14 23:31:56,547 | INFO     | this job has now completed (state=finished)
[2025-12-14 18:32:34] 2025-12-14 23:31:56,547 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-14 18:32:34] 2025-12-14 23:31:56,547 | INFO     | log transfer has been attempted: DONE
[2025-12-14 18:32:34] 2025-12-14 23:31:56,547 | INFO     | job 6929449726 has finished - writing final server update
[2025-12-14 18:32:34] 2025-12-14 23:31:56,548 | INFO     | total number of processed events: 400 (read)
[2025-12-14 18:32:34] 2025-12-14 23:31:56,548 | INFO     | executing command: lscpu
[2025-12-14 18:32:34] 2025-12-14 23:31:56,573 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-14 18:32:34] 2025-12-14 23:31:56,752 | INFO     | time since job start (4719s) is within the limit (174528.0s)
[2025-12-14 18:32:34] 2025-12-14 23:31:57,112 | INFO     | monitor loop #352: job 0:6929449726 is in state 'finished'
[2025-12-14 18:32:34] 2025-12-14 23:31:57,112 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 18:32:34] 2025-12-14 23:31:58,758 | INFO     | time since job start (4721s) is within the limit (174528.0s)
[2025-12-14 18:32:34] 2025-12-14 23:31:59,615 | INFO     | monitor loop #353: job 0:6929449726 is in state 'finished'
[2025-12-14 18:32:34] 2025-12-14 23:31:59,615 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 18:32:34] 2025-12-14 23:32:00,763 | INFO     | time since job start (4723s) is within the limit (174528.0s)
[2025-12-14 18:32:34] 2025-12-14 23:32:02,118 | INFO     | monitor loop #354: job 0:6929449726 is in state 'finished'
[2025-12-14 18:32:34] 2025-12-14 23:32:02,118 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 18:32:34] 2025-12-14 23:32:02,490 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-14 18:32:34] 2025-12-14 23:32:02,494 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-12-14 18:32:34] 2025-12-14 23:32:02,497 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929449726/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 18:32:34] 2025-12-14 23:32:02,498 | INFO     | extracted standard info from prmon json
[2025-12-14 18:32:34] 2025-12-14 23:32:02,498 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 18:32:34] 2025-12-14 23:32:02,498 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 18:32:34] 2025-12-14 23:32:02,498 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 18:32:34] 2025-12-14 23:32:02,499 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 18:32:34] 2025-12-14 23:32:02,501 | INFO     | fitting pss+swap vs Time
[2025-12-14 18:32:34] 2025-12-14 23:32:02,501 | INFO     | sum of square deviations: 106336877.5
[2025-12-14 18:32:34] 2025-12-14 23:32:02,501 | INFO     | sum of deviations: -7726919775.999999
[2025-12-14 18:32:34] 2025-12-14 23:32:02,501 | INFO     | mean x: 1765752835.5
[2025-12-14 18:32:34] 2025-12-14 23:32:02,501 | INFO     | mean y: 2862011.1142857145
[2025-12-14 18:32:34] 2025-12-14 23:32:02,501 | INFO     | intersect: 128310471044.98894
[2025-12-14 18:32:34] 2025-12-14 23:32:02,502 | INFO     | chi2: 0.07476639130923775
[2025-12-14 18:32:34] 2025-12-14 23:32:02,502 | INFO     | current memory leak: -72.66 B/s (using 70 data points, chi2=0.07)
[2025-12-14 18:32:34] 2025-12-14 23:32:02,502 | INFO     | could have reported an average CPU frequency of 2032 MHz (6 samples)
[2025-12-14 18:32:34] 2025-12-14 23:32:02,502 | INFO     | ..............................
[2025-12-14 18:32:34] 2025-12-14 23:32:02,502 | INFO     | . Timing measurements:
[2025-12-14 18:32:34] 2025-12-14 23:32:02,502 | INFO     | . get job = 0 s
[2025-12-14 18:32:34] 2025-12-14 23:32:02,503 | INFO     | . initial setup = 2 s
[2025-12-14 18:32:34] 2025-12-14 23:32:02,503 | INFO     | . payload setup = 7 s
[2025-12-14 18:32:34] 2025-12-14 23:32:02,503 | INFO     | . stage-in = 0 s
[2025-12-14 18:32:34] 2025-12-14 23:32:02,503 | INFO     | . payload execution = 4690 s
[2025-12-14 18:32:34] 2025-12-14 23:32:02,503 | INFO     | . stage-out = 0 s
[2025-12-14 18:32:34] 2025-12-14 23:32:02,503 | INFO     | . log creation = 0 s
[2025-12-14 18:32:34] 2025-12-14 23:32:02,503 | INFO     | ..............................
[2025-12-14 18:32:34] 2025-12-14 23:32:02,583 | INFO     | 
[2025-12-14 18:32:34] 2025-12-14 23:32:02,583 | INFO     | job summary report
[2025-12-14 18:32:34] 2025-12-14 23:32:02,583 | INFO     | --------------------------------------------------
[2025-12-14 18:32:34] 2025-12-14 23:32:02,584 | INFO     | PanDA job id: 6929449726
[2025-12-14 18:32:34] 2025-12-14 23:32:02,584 | INFO     | task id: 47886933
[2025-12-14 18:32:34] 2025-12-14 23:32:02,584 | INFO     | errors: (none)
[2025-12-14 18:32:34] 2025-12-14 23:32:02,584 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 18:32:34] 2025-12-14 23:32:02,584 | INFO     | pilot state: finished 
[2025-12-14 18:32:34] 2025-12-14 23:32:02,584 | INFO     | transexitcode: 0
[2025-12-14 18:32:34] 2025-12-14 23:32:02,584 | INFO     | exeerrorcode: 0
[2025-12-14 18:32:34] 2025-12-14 23:32:02,584 | INFO     | exeerrordiag: 
[2025-12-14 18:32:34] 2025-12-14 23:32:02,584 | INFO     | exitcode: 0
[2025-12-14 18:32:34] 2025-12-14 23:32:02,584 | INFO     | exitmsg: OK
[2025-12-14 18:32:34] 2025-12-14 23:32:02,585 | INFO     | cpuconsumptiontime: 49282 s
[2025-12-14 18:32:34] 2025-12-14 23:32:02,585 | INFO     | nevents: 400
[2025-12-14 18:32:34] 2025-12-14 23:32:02,585 | INFO     | neventsw: 0
[2025-12-14 18:32:34] 2025-12-14 23:32:02,585 | INFO     | pid: 15736
[2025-12-14 18:32:34] 2025-12-14 23:32:02,585 | INFO     | pgrp: 15736
[2025-12-14 18:32:34] 2025-12-14 23:32:02,585 | INFO     | corecount: 12
[2025-12-14 18:32:34] 2025-12-14 23:32:02,585 | INFO     | event service: False
[2025-12-14 18:32:34] 2025-12-14 23:32:02,585 | INFO     | sizes: {0: 2283795, 1: 2283994, 6: 2284256, 11: 2284284, 4701: 2310436, 4702: 2310435, 4704: 2319673, 4710: 2319811}
[2025-12-14 18:32:34] 2025-12-14 23:32:02,585 | INFO     | --------------------------------------------------
[2025-12-14 18:32:34] 2025-12-14 23:32:02,585 | INFO     | 
[2025-12-14 18:32:34] 2025-12-14 23:32:02,586 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-14 18:32:34] 2025-12-14 23:32:02,609 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 18:32:34] 2025-12-14 23:32:02,609 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 18:32:34] 2025-12-14 23:32:02,609 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 18:32:34] 2025-12-14 23:32:02,609 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 18:32:34] 2025-12-14 23:32:02,610 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 18:32:34] 2025-12-14 23:32:02,610 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 18:32:34] 2025-12-14 23:32:02,610 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 18:32:34] 2025-12-14 23:32:02,610 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 18:32:34] 2025-12-14 23:32:02,610 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 18:32:34] 2025-12-14 23:32:02,610 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 18:32:34] 2025-12-14 23:32:02,610 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 18:32:34] 2025-12-14 23:32:02,610 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 18:32:34] 2025-12-14 23:32:02,610 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 18:32:34] 2025-12-14 23:32:02,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 18:32:34] 2025-12-14 23:32:02,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 18:32:34] 2025-12-14 23:32:02,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 18:32:34] 2025-12-14 23:32:02,611 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 18:32:34] 2025-12-14 23:32:02,611 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 18:32:34] 2025-12-14 23:32:02,611 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 18:32:34] 2025-12-14 23:32:02,611 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 18:32:34] 2025-12-14 23:32:02,611 | INFO     | job 6929449726 has completed (purged errors)
[2025-12-14 18:32:34] 2025-12-14 23:32:02,612 | INFO     | overall cleanup function is called
[2025-12-14 18:32:34] 2025-12-14 23:32:03,619 | INFO     | --- collectZombieJob: --- 10, [15736]
[2025-12-14 18:32:34] 2025-12-14 23:32:03,619 | INFO     | zombie collector waiting for pid 15736
[2025-12-14 18:32:34] 2025-12-14 23:32:03,619 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 18:32:34] 2025-12-14 23:32:03,619 | INFO     | collected zombie processes
[2025-12-14 18:32:34] 2025-12-14 23:32:03,620 | INFO     | will attempt to kill all subprocesses of pid=15736
[2025-12-14 18:32:34] 2025-12-14 23:32:03,710 | INFO     | process IDs to be killed: [15736] (in reverse order)
[2025-12-14 18:32:34] 2025-12-14 23:32:03,762 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 18:32:34] 2025-12-14 23:32:03,763 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 18:32:34] 2025-12-14 23:32:03,765 | INFO     | did not find any defunct processes belonging to 15736
[2025-12-14 18:32:34] 2025-12-14 23:32:03,768 | INFO     | did not find any defunct processes belonging to 15736
[2025-12-14 18:32:34] 2025-12-14 23:32:03,768 | INFO     | ready for new job
[2025-12-14 18:32:34] 2025-12-14 23:32:03,769 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 18:32:34] 2025-12-14 23:32:03,770 | INFO     | ***************************************
[2025-12-14 18:32:34] 2025-12-14 23:32:03,770 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 18:32:34] 2025-12-14 23:32:03,770 | INFO     | ***************************************
[2025-12-14 18:32:34] 2025-12-14 23:32:03,770 | INFO     | 
[2025-12-14 18:32:34] 2025-12-14 23:32:03,771 | INFO     | architecture information:
[2025-12-14 18:32:34] 2025-12-14 23:32:03,771 | INFO     | executing command: cat /etc/os-release
[2025-12-14 18:32:34] 2025-12-14 23:32:03,785 | INFO     | cat /etc/os-release:
[2025-12-14 18:32:34] NAME="CentOS Linux"
[2025-12-14 18:32:34] VERSION="7 (Core)"
[2025-12-14 18:32:34] ID="centos"
[2025-12-14 18:32:34] ID_LIKE="rhel fedora"
[2025-12-14 18:32:34] VERSION_ID="7"
[2025-12-14 18:32:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 18:32:34] ANSI_COLOR="0;31"
[2025-12-14 18:32:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 18:32:34] HOME_URL="https://www.centos.org/"
[2025-12-14 18:32:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 18:32:34] 
[2025-12-14 18:32:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 18:32:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 18:32:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 18:32:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 18:32:34] 
[2025-12-14 18:32:34] 2025-12-14 23:32:03,785 | INFO     | ***************************************
[2025-12-14 18:32:34] 2025-12-14 23:32:04,288 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-14 18:32:34] 2025-12-14 23:32:04,307 | INFO     | sufficient remaining disk space (29453451264 B)
[2025-12-14 18:32:34] 2025-12-14 23:32:04,307 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 18:32:34] 2025-12-14 23:32:04,307 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 18:32:34] 2025-12-14 23:32:04,308 | INFO     | update_server=False
[2025-12-14 18:32:34] 2025-12-14 23:32:04,308 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 18:32:34] 2025-12-14 23:32:04,308 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 18:32:34] 2025-12-14 23:32:04,480 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 18:32:34] 2025-12-14 23:32:04,621 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-14 18:32:34] 2025-12-14 23:32:04,621 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-14 18:32:34] 2025-12-14 23:32:04,621 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 18:32:34] 2025-12-14 23:32:04,622 | INFO     | will abort loop
[2025-12-14 18:32:34] 2025-12-14 23:32:04,696 | INFO     | all data control threads have been joined
[2025-12-14 18:32:34] 2025-12-14 23:32:05,057 | INFO     | all payload control threads have been joined
[2025-12-14 18:32:34] 2025-12-14 23:32:05,313 | INFO     | [job] retrieve thread has finished
[2025-12-14 18:32:34] 2025-12-14 23:32:05,314 | INFO     | [job] queue monitor thread has finished
[2025-12-14 18:32:34] 2025-12-14 23:32:05,359 | INFO     | all job control threads have been joined
[2025-12-14 18:32:34] 2025-12-14 23:32:05,627 | INFO     | [job] job monitor thread has finished
[2025-12-14 18:32:34] 2025-12-14 23:32:05,702 | INFO     | [data] control thread has finished
[2025-12-14 18:32:34] 2025-12-14 23:32:05,816 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 18:32:34] 2025-12-14 23:32:05,825 | INFO     | [job] validate thread has finished
[2025-12-14 18:32:34] 2025-12-14 23:32:05,915 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 18:32:34] 2025-12-14 23:32:06,063 | INFO     | [payload] control thread has finished
[2025-12-14 18:32:34] 2025-12-14 23:32:06,142 | INFO     | [payload] failed_post thread has finished
[2025-12-14 18:32:34] 2025-12-14 23:32:06,216 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 18:32:34] 2025-12-14 23:32:06,361 | INFO     | [job] control thread has finished
[2025-12-14 18:32:34] 2025-12-14 23:32:06,485 | INFO     | [data] copytool_out thread has finished
[2025-12-14 18:32:34] 2025-12-14 23:32:06,530 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 18:32:34] 2025-12-14 23:32:06,578 | INFO     | [data] copytool_in thread has finished
[2025-12-14 18:32:34] 2025-12-14 23:32:06,735 | INFO     | [payload] validate_post thread has finished
[2025-12-14 18:32:34] 2025-12-14 23:32:07,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 18:32:34] 2025-12-14 23:32:11,064 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 18:32:34] 2025-12-14 23:32:23,536 | INFO     | [monitor] cgroup control has ended
[2025-12-14 18:32:34] 2025-12-14 23:32:24,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140619819505472)>', '<ExcThread(monitor, started 140619234141952)>']
[2025-12-14 18:32:34] 2025-12-14 23:32:29,991 | INFO     | all workflow threads have been joined
[2025-12-14 18:32:34] 2025-12-14 23:32:29,991 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 18:32:34] 2025-12-14 23:32:29,992 | INFO     | traces error code: 0
[2025-12-14 18:32:34] 2025-12-14 23:32:29,992 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 18:32:34] 2025-12-14 23:32:33,963 | INFO     | PID=9261 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-14 18:32:34] 2025-12-14 23:32:33,964 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 18:32:34] 2025-12-14 23:32:33,964 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 18:32:34] 2025-12-14 23:32:33,964 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 18:32:34] 2025-12-14 23:32:33,964 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 18:32:34] 2025-12-14 23:32:33,964 | INFO     | [monitor] control thread has ended
[2025-12-14 18:32:34] 2025-12-14 23:32:34,053 [wrapper] ==== pilot stdout END ====
[2025-12-14 18:32:34] 2025-12-14 23:32:34,057 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 18:32:34] 2025-12-14 23:32:34,061 [wrapper] pilotpid: 9261
[2025-12-14 18:32:34] 2025-12-14 23:32:34,065 [wrapper] Pilot exit status: 0
[2025-12-14 18:32:34] 2025-12-14 23:32:34,081 [wrapper] pandaids: 6929449726
[2025-12-14 18:32:34] 2025-12-14 23:32:34,122 [wrapper] cleanup supervisor_pilot 12126 9262
[2025-12-14 18:32:34] 2025-12-14 23:32:34,127 [wrapper] Test setup, not cleaning
[2025-12-14 18:32:34] 2025-12-14 23:32:34,131 [wrapper] apfmon messages muted
[2025-12-14 18:32:34] 2025-12-14 23:32:34,135 [wrapper] ==== wrapper stdout END ====
[2025-12-14 18:32:34] 2025-12-14 23:32:34,139 [wrapper] ==== wrapper stderr END ====
[2025-12-14 18:32:34]  *** Error codes and diagnostics ***
[2025-12-14 18:32:34]     "exeErrorCode": 0,
[2025-12-14 18:32:34]     "exeErrorDiag": "",
[2025-12-14 18:32:34]     "pilotErrorCode": 0,
[2025-12-14 18:32:34]     "pilotErrorDiag": "",
[2025-12-14 18:32:34]  *** Listing of results directory ***
[2025-12-14 18:32:34] total 336324
[2025-12-14 18:32:34] -rw-r--r-- 1 boincer umatlas    579449 Dec 14 06:00 pilot3.tar.gz
[2025-12-14 18:32:34] -rwx------ 1 boincer umatlas     36322 Dec 14 06:03 runpilot2-wrapper.sh
[2025-12-14 18:32:34] -rw-r--r-- 1 boincer umatlas      5112 Dec 14 06:03 queuedata.json
[2025-12-14 18:32:34] -rw-r--r-- 1 boincer umatlas       100 Dec 14 17:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 18:32:34] -rwxr-xr-x 1 boincer umatlas      7986 Dec 14 17:12 run_atlas
[2025-12-14 18:32:34] -rw-r--r-- 1 boincer umatlas       105 Dec 14 17:12 job.xml
[2025-12-14 18:32:34] -rw-r--r-- 2 boincer umatlas 194715745 Dec 14 17:13 EVNT.47886929._000151.pool.root.1
[2025-12-14 18:32:34] -rw-r--r-- 2 boincer umatlas    592399 Dec 14 17:13 input.tar.gz
[2025-12-14 18:32:34] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 17:13 start_atlas.sh
[2025-12-14 18:32:34] drwxrwx--x 2 boincer umatlas      4096 Dec 14 17:13 shared
[2025-12-14 18:32:34] -rw-r--r-- 1 boincer umatlas         0 Dec 14 17:13 boinc_lockfile
[2025-12-14 18:32:34] -rw-r--r-- 1 boincer umatlas      2514 Dec 14 17:13 pandaJob.out
[2025-12-14 18:32:34] -rw------- 1 boincer umatlas        57 Dec 14 17:13 setup.sh.local
[2025-12-14 18:32:34] -rw------- 1 boincer umatlas    991024 Dec 14 17:13 agis_schedconf.cvmfs.json
[2025-12-14 18:32:34] -rw------- 1 boincer umatlas   1516240 Dec 14 17:13 agis_ddmendpoints.agis.ALL.json
[2025-12-14 18:32:34] drwx------ 5 boincer umatlas      4096 Dec 14 17:13 pilot3
[2025-12-14 18:32:34] -rw-r--r-- 1 boincer umatlas      5953 Dec 14 18:30 init_data.xml
[2025-12-14 18:32:34] -rw------- 1 boincer umatlas 143639371 Dec 14 18:31 HITS.47886933._003329.pool.root.1
[2025-12-14 18:32:34] -rw-r--r-- 1 boincer umatlas       529 Dec 14 18:31 boinc_task_state.xml
[2025-12-14 18:32:34] -rw------- 1 boincer umatlas      1059 Dec 14 18:31 memory_monitor_summary.json
[2025-12-14 18:32:34] -rw------- 1 boincer umatlas    383067 Dec 14 18:31 log.47886933._003329.job.log.tgz.1
[2025-12-14 18:32:34] -rw------- 1 boincer umatlas      7850 Dec 14 18:32 heartbeat.json
[2025-12-14 18:32:34] -rw-r--r-- 1 boincer umatlas        27 Dec 14 18:32 wrapper_checkpoint.txt
[2025-12-14 18:32:34] -rw-r--r-- 1 boincer umatlas      8192 Dec 14 18:32 boinc_mmap_file
[2025-12-14 18:32:34] -rw------- 1 boincer umatlas       744 Dec 14 18:32 pilotlog.txt
[2025-12-14 18:32:34] -rw------- 1 boincer umatlas        95 Dec 14 18:32 pilot_heartbeat.json
[2025-12-14 18:32:34] -rw------- 1 boincer umatlas    682842 Dec 14 18:32 log.47886933._003329.job.log.1
[2025-12-14 18:32:34] -rw------- 1 boincer umatlas       357 Dec 14 18:32 output.list
[2025-12-14 18:32:34] -rw-r--r-- 1 boincer umatlas       620 Dec 14 18:32 runtime_log
[2025-12-14 18:32:34] -rw------- 1 boincer umatlas   1085440 Dec 14 18:32 result.tar.gz
[2025-12-14 18:32:34] -rw-r--r-- 1 boincer umatlas      9344 Dec 14 18:32 runtime_log.err
[2025-12-14 18:32:34] -rw------- 1 boincer umatlas       659 Dec 14 18:32 dZxNDm13yo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3VVKDmKCYz1m.diag
[2025-12-14 18:32:34] -rw-r--r-- 1 boincer umatlas     21840 Dec 14 18:32 stderr.txt
[2025-12-14 18:32:34] HITS file was successfully produced:
[2025-12-14 18:32:34] -rw------- 1 boincer umatlas 143639371 Dec 14 18:31 shared/HITS.pool.root.1
[2025-12-14 18:32:34]  *** Contents of shared directory: ***
[2025-12-14 18:32:34] total 332088
[2025-12-14 18:32:34] -rw-r--r-- 2 boincer umatlas 194715745 Dec 14 17:13 ATLAS.root_0
[2025-12-14 18:32:34] -rw-r--r-- 2 boincer umatlas    592399 Dec 14 17:13 input.tar.gz
[2025-12-14 18:32:34] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 17:13 start_atlas.sh
[2025-12-14 18:32:34] -rw------- 1 boincer umatlas 143639371 Dec 14 18:31 HITS.pool.root.1
[2025-12-14 18:32:34] -rw------- 1 boincer umatlas   1085440 Dec 14 18:32 result.tar.gz
18:32:35 (5536): run_atlas exited; CPU time 49263.656661
18:32:35 (5536): called boinc_finish(0)

</stderr_txt>
]]>

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