Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:12:35 (2068892): wrapper (7.7.26015): starting
07:12:35 (2068892): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 07:12:35] Arguments: --nthreads 4
[2025-12-16 07:12:35] Threads: 4
[2025-12-16 07:12:35] Checking for CVMFS
[2025-12-16 07:12:35] No cvmfs_config command found, will try listing directly
[2025-12-16 07:12:35] CVMFS is ok
[2025-12-16 07:12:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 07:12:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 07:12:35] Further information can be found at the LHC@home message board.
[2025-12-16 07:12:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 07:12:35] Checking for apptainer binary...
[2025-12-16 07:12:35] which: no apptainer in ((null))
[2025-12-16 07:12:35] apptainer is not installed, using version from CVMFS
[2025-12-16 07:12:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 07:12:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-12-16 07:12:35] apptainer works
[2025-12-16 07:12:35] Set ATHENA_PROC_NUMBER=4
[2025-12-16 07:12:35] Set ATHENA_CORE_NUMBER=4
[2025-12-16 07:12:35] Starting ATLAS job with PandaID=6929449307
[2025-12-16 07:12:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 10:06:19]  *** The last 200 lines of the pilot log: ***
[2025-12-16 10:06:19] 2025-12-16 09:05:36,380 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 10:06:19] 2025-12-16 09:05:36,399 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2709.152335937502
[2025-12-16 10:06:19] 2025-12-16 09:05:36,421 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6929449307/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 10:06:19] 2025-12-16 09:05:36,422 | INFO     | extracted standard info from prmon json
[2025-12-16 10:06:19] 2025-12-16 09:05:36,422 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 10:06:19] 2025-12-16 09:05:36,422 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 10:06:19] 2025-12-16 09:05:36,423 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 10:06:19] 2025-12-16 09:05:36,423 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 10:06:19] 2025-12-16 09:05:36,426 | INFO     | fitting pss+swap vs Time
[2025-12-16 10:06:19] 2025-12-16 09:05:36,426 | INFO     | sum of square deviations: 1523386702.5
[2025-12-16 10:06:19] 2025-12-16 09:05:36,427 | INFO     | sum of deviations: 5996551106.5
[2025-12-16 10:06:19] 2025-12-16 09:05:36,427 | INFO     | mean x: 1765870759.5
[2025-12-16 10:06:19] 2025-12-16 09:05:36,427 | INFO     | mean y: 2299199.8294117646
[2025-12-16 10:06:19] 2025-12-16 09:05:36,427 | INFO     | intersect: -6948748908.597753
[2025-12-16 10:06:19] 2025-12-16 09:05:36,428 | INFO     | chi2: 2.08662255358743
[2025-12-16 10:06:19] 2025-12-16 09:05:36,428 | INFO     | sum of square deviations: 1392881930.0
[2025-12-16 10:06:19] 2025-12-16 09:05:36,429 | INFO     | sum of deviations: 16295541586.000008
[2025-12-16 10:06:19] 2025-12-16 09:05:36,429 | INFO     | mean x: 1765870607.0
[2025-12-16 10:06:19] 2025-12-16 09:05:36,429 | INFO     | mean y: 2310941.193939394
[2025-12-16 10:06:19] 2025-12-16 09:05:36,429 | INFO     | intersect: -20656882987.658
[2025-12-16 10:06:19] 2025-12-16 09:05:36,429 | INFO     | chi2: 1.295200220091371
[2025-12-16 10:06:19] 2025-12-16 09:05:36,429 | INFO     | current chi2=1.295200220091371 (change=37.92838969057458 %)
[2025-12-16 10:06:19] 2025-12-16 09:05:36,430 | INFO     | sum of square deviations: 1270051720.0
[2025-12-16 10:06:19] 2025-12-16 09:05:36,430 | INFO     | sum of deviations: 15864749490.499992
[2025-12-16 10:06:19] 2025-12-16 09:05:36,431 | INFO     | mean x: 1765870454.5
[2025-12-16 10:06:19] 2025-12-16 09:05:36,431 | INFO     | mean y: 2310406.18125
[2025-12-16 10:06:19] 2025-12-16 09:05:36,431 | INFO     | intersect: -22055919154.200638
[2025-12-16 10:06:19] 2025-12-16 09:05:36,431 | INFO     | chi2: 1.2962360159498356
[2025-12-16 10:06:19] 2025-12-16 09:05:36,431 | INFO     | current chi2=1.2962360159498356 (change=-0.07997187171505515 %)
[2025-12-16 10:06:19] 2025-12-16 09:05:36,431 | INFO     | right removable region: 159
[2025-12-16 10:06:19] 2025-12-16 09:05:36,431 | INFO     | sum of square deviations: 1392881930.0
[2025-12-16 10:06:19] 2025-12-16 09:05:36,432 | INFO     | sum of deviations: -14087523671.000008
[2025-12-16 10:06:19] 2025-12-16 09:05:36,432 | INFO     | mean x: 1765870912.0
[2025-12-16 10:06:19] 2025-12-16 09:05:36,432 | INFO     | mean y: 2322275.696969697
[2025-12-16 10:06:19] 2025-12-16 09:05:36,433 | INFO     | intersect: 17862233971.679966
[2025-12-16 10:06:19] 2025-12-16 09:05:36,433 | INFO     | chi2: 0.8158534377906053
[2025-12-16 10:06:19] 2025-12-16 09:05:36,433 | INFO     | current chi2=0.8158534377906053 (change=60.90076586261623 %)
[2025-12-16 10:06:19] 2025-12-16 09:05:36,433 | INFO     | sum of square deviations: 1270051720.0
[2025-12-16 10:06:19] 2025-12-16 09:05:36,434 | INFO     | sum of deviations: -13670693804.5
[2025-12-16 10:06:19] 2025-12-16 09:05:36,434 | INFO     | mean x: 1765871064.5
[2025-12-16 10:06:19] 2025-12-16 09:05:36,434 | INFO     | mean y: 2321754.33125
[2025-12-16 10:06:19] 2025-12-16 09:05:36,434 | INFO     | intersect: 19009959192.124702
[2025-12-16 10:06:19] 2025-12-16 09:05:36,434 | INFO     | chi2: 0.816146722144935
[2025-12-16 10:06:19] 2025-12-16 09:05:36,434 | INFO     | current chi2=0.816146722144935 (change=-0.03594816675945791 %)
[2025-12-16 10:06:19] 2025-12-16 09:05:36,435 | INFO     | left removable region: 20
[2025-12-16 10:06:19] 2025-12-16 09:05:36,435 | INFO     | sum of square deviations: 832722590.0
[2025-12-16 10:06:19] 2025-12-16 09:05:36,435 | INFO     | sum of deviations: -2272082067.0
[2025-12-16 10:06:19] 2025-12-16 09:05:36,436 | INFO     | mean x: 1765871034.0
[2025-12-16 10:06:19] 2025-12-16 09:05:36,436 | INFO     | mean y: 2333756.5899280575
[2025-12-16 10:06:19] 2025-12-16 09:05:36,436 | INFO     | intersect: 4820509649.940134
[2025-12-16 10:06:19] 2025-12-16 09:05:36,436 | INFO     | chi2: 0.001450641395869642
[2025-12-16 10:06:19] 2025-12-16 09:05:36,436 | INFO     | current memory leak: -2.73 B/s (using 139 data points, chi2=0.00)
[2025-12-16 10:06:19] 2025-12-16 09:05:36,436 | INFO     | could have reported an average CPU frequency of 2693 MHz (9 samples)
[2025-12-16 10:06:19] 2025-12-16 09:05:36,436 | INFO     | ..............................
[2025-12-16 10:06:19] 2025-12-16 09:05:36,437 | INFO     | . Timing measurements:
[2025-12-16 10:06:19] 2025-12-16 09:05:36,437 | INFO     | . get job = 0 s
[2025-12-16 10:06:19] 2025-12-16 09:05:36,437 | INFO     | . initial setup = 1 s
[2025-12-16 10:06:19] 2025-12-16 09:05:36,437 | INFO     | . payload setup = 8 s
[2025-12-16 10:06:19] 2025-12-16 09:05:36,437 | INFO     | . stage-in = 0 s
[2025-12-16 10:06:19] 2025-12-16 09:05:36,437 | INFO     | . payload execution = 10324 s
[2025-12-16 10:06:19] 2025-12-16 09:05:36,437 | INFO     | . stage-out = 0 s
[2025-12-16 10:06:19] 2025-12-16 09:05:36,437 | INFO     | . log creation = 0 s
[2025-12-16 10:06:19] 2025-12-16 09:05:36,437 | INFO     | ..............................
[2025-12-16 10:06:19] 2025-12-16 09:05:36,693 | INFO     | time since job start (10367s) is within the limit (174528.0s)
[2025-12-16 10:06:19] 2025-12-16 09:05:36,719 | INFO     | 
[2025-12-16 10:06:19] 2025-12-16 09:05:36,719 | INFO     | job summary report
[2025-12-16 10:06:19] 2025-12-16 09:05:36,719 | INFO     | --------------------------------------------------
[2025-12-16 10:06:19] 2025-12-16 09:05:36,719 | INFO     | PanDA job id: 6929449307
[2025-12-16 10:06:19] 2025-12-16 09:05:36,719 | INFO     | task id: 47886933
[2025-12-16 10:06:19] 2025-12-16 09:05:36,720 | INFO     | errors: (none)
[2025-12-16 10:06:19] 2025-12-16 09:05:36,720 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 10:06:19] 2025-12-16 09:05:36,720 | INFO     | pilot state: finished 
[2025-12-16 10:06:19] 2025-12-16 09:05:36,720 | INFO     | transexitcode: 0
[2025-12-16 10:06:19] 2025-12-16 09:05:36,720 | INFO     | exeerrorcode: 0
[2025-12-16 10:06:19] 2025-12-16 09:05:36,720 | INFO     | exeerrordiag: 
[2025-12-16 10:06:19] 2025-12-16 09:05:36,720 | INFO     | exitcode: 0
[2025-12-16 10:06:19] 2025-12-16 09:05:36,720 | INFO     | exitmsg: OK
[2025-12-16 10:06:19] 2025-12-16 09:05:36,720 | INFO     | cpuconsumptiontime: 39768 s
[2025-12-16 10:06:19] 2025-12-16 09:05:36,720 | INFO     | nevents: 400
[2025-12-16 10:06:19] 2025-12-16 09:05:36,720 | INFO     | neventsw: 0
[2025-12-16 10:06:19] 2025-12-16 09:05:36,720 | INFO     | pid: 2091786
[2025-12-16 10:06:19] 2025-12-16 09:05:36,721 | INFO     | pgrp: 2091786
[2025-12-16 10:06:19] 2025-12-16 09:05:36,721 | INFO     | corecount: 4
[2025-12-16 10:06:19] 2025-12-16 09:05:36,721 | INFO     | event service: False
[2025-12-16 10:06:19] 2025-12-16 09:05:36,721 | INFO     | sizes: {0: 2283807, 1: 2284006, 7: 2284268, 11: 2284296, 10337: 2313506, 10338: 2322528, 10340: 2322712, 10349: 2322970}
[2025-12-16 10:06:19] 2025-12-16 09:05:36,721 | INFO     | --------------------------------------------------
[2025-12-16 10:06:19] 2025-12-16 09:05:36,721 | INFO     | 
[2025-12-16 10:06:19] 2025-12-16 09:05:36,721 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-12-16 10:06:19] 2025-12-16 09:05:36,749 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 10:06:19] 2025-12-16 09:05:36,750 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 10:06:19] 2025-12-16 09:05:36,750 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 10:06:19] 2025-12-16 09:05:36,750 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 10:06:19] 2025-12-16 09:05:36,750 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 10:06:19] 2025-12-16 09:05:36,750 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 10:06:19] 2025-12-16 09:05:36,750 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 10:06:19] 2025-12-16 09:05:36,750 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 10:06:19] 2025-12-16 09:05:36,750 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 10:06:19] 2025-12-16 09:05:36,751 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 10:06:19] 2025-12-16 09:05:36,751 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 10:06:19] 2025-12-16 09:05:36,751 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 10:06:19] 2025-12-16 09:05:36,751 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 10:06:19] 2025-12-16 09:05:36,751 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 10:06:19] 2025-12-16 09:05:36,751 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 10:06:19] 2025-12-16 09:05:36,751 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 10:06:19] 2025-12-16 09:05:36,751 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 10:06:19] 2025-12-16 09:05:36,751 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 10:06:19] 2025-12-16 09:05:36,751 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 10:06:19] 2025-12-16 09:05:36,751 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 10:06:19] 2025-12-16 09:05:36,751 | INFO     | job 6929449307 has completed (purged errors)
[2025-12-16 10:06:19] 2025-12-16 09:05:36,752 | INFO     | overall cleanup function is called
[2025-12-16 10:06:19] 2025-12-16 09:05:37,760 | INFO     | --- collectZombieJob: --- 10, [2091786]
[2025-12-16 10:06:19] 2025-12-16 09:05:37,760 | INFO     | zombie collector waiting for pid 2091786
[2025-12-16 10:06:19] 2025-12-16 09:05:37,760 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 10:06:19] 2025-12-16 09:05:37,760 | INFO     | collected zombie processes
[2025-12-16 10:06:19] 2025-12-16 09:05:37,760 | INFO     | will attempt to kill all subprocesses of pid=2091786
[2025-12-16 10:06:19] 2025-12-16 09:05:38,541 | INFO     | process IDs to be killed: [2091786] (in reverse order)
[2025-12-16 10:06:19] 2025-12-16 09:05:38,780 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 10:06:19] 2025-12-16 09:05:38,780 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 10:06:19] 2025-12-16 09:05:38,809 | INFO     | did not find any defunct processes belonging to 2091786
[2025-12-16 10:06:19] 2025-12-16 09:05:38,836 | INFO     | did not find any defunct processes belonging to 2091786
[2025-12-16 10:06:19] 2025-12-16 09:05:38,837 | INFO     | ready for new job
[2025-12-16 10:06:19] 2025-12-16 09:05:38,837 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 10:06:19] 2025-12-16 09:05:38,839 | INFO     | ***************************************
[2025-12-16 10:06:19] 2025-12-16 09:05:38,839 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 10:06:19] 2025-12-16 09:05:38,839 | INFO     | ***************************************
[2025-12-16 10:06:19] 2025-12-16 09:05:38,839 | INFO     | 
[2025-12-16 10:06:19] 2025-12-16 09:05:38,847 | INFO     | architecture information:
[2025-12-16 10:06:19] 2025-12-16 09:05:38,847 | INFO     | executing command: cat /etc/os-release
[2025-12-16 10:06:19] 2025-12-16 09:05:38,868 | INFO     | cat /etc/os-release:
[2025-12-16 10:06:19] NAME="CentOS Linux"
[2025-12-16 10:06:19] VERSION="7 (Core)"
[2025-12-16 10:06:19] ID="centos"
[2025-12-16 10:06:19] ID_LIKE="rhel fedora"
[2025-12-16 10:06:19] VERSION_ID="7"
[2025-12-16 10:06:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 10:06:19] ANSI_COLOR="0;31"
[2025-12-16 10:06:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 10:06:19] HOME_URL="https://www.centos.org/"
[2025-12-16 10:06:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 10:06:19] 
[2025-12-16 10:06:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 10:06:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 10:06:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 10:06:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 10:06:19] 
[2025-12-16 10:06:19] 2025-12-16 09:05:38,869 | INFO     | ***************************************
[2025-12-16 10:06:19] 2025-12-16 09:05:39,372 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-12-16 10:06:19] 2025-12-16 09:05:39,396 | INFO     | sufficient remaining disk space (3338539106304 B)
[2025-12-16 10:06:19] 2025-12-16 09:05:39,396 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 10:06:19] 2025-12-16 09:05:39,397 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 10:06:19] 2025-12-16 09:05:39,397 | INFO     | update_server=False
[2025-12-16 10:06:19] 2025-12-16 09:05:39,397 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 10:06:19] 2025-12-16 09:05:39,397 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 10:06:19] 2025-12-16 09:05:40,004 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 10:06:19] 2025-12-16 09:05:40,004 | INFO     | aborting loop
[2025-12-16 10:06:19] 2025-12-16 09:05:40,202 | INFO     | all data control threads have been joined
[2025-12-16 10:06:19] 2025-12-16 09:05:40,399 | INFO     | [job] retrieve thread has finished
[2025-12-16 10:06:19] 2025-12-16 09:05:40,579 | INFO     | [payload] failed_post thread has finished
[2025-12-16 10:06:19] 2025-12-16 09:05:40,615 | INFO     | [data] copytool_in thread has finished
[2025-12-16 10:06:19] 2025-12-16 09:05:40,647 | INFO     | all payload control threads have been joined
[2025-12-16 10:06:19] 2025-12-16 09:05:40,849 | INFO     | all job control threads have been joined
[2025-12-16 10:06:19] 2025-12-16 09:05:40,894 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 10:06:19] 2025-12-16 09:05:40,941 | INFO     | [job] validate thread has finished
[2025-12-16 10:06:19] 2025-12-16 09:05:40,969 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 10:06:19] 2025-12-16 09:05:41,009 | INFO     | [job] job monitor thread has finished
[2025-12-16 10:06:19] 2025-12-16 09:05:41,208 | INFO     | [data] control thread has finished
[2025-12-16 10:06:19] 2025-12-16 09:05:41,403 | INFO     | [data] copytool_out thread has finished
[2025-12-16 10:06:19] 2025-12-16 09:05:41,424 | INFO     | [payload] validate_post thread has finished
[2025-12-16 10:06:19] 2025-12-16 09:05:41,533 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 10:06:19] 2025-12-16 09:05:41,653 | INFO     | [payload] control thread has finished
[2025-12-16 10:06:19] 2025-12-16 09:05:41,826 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 10:06:19] 2025-12-16 09:05:41,855 | INFO     | [job] control thread has finished
[2025-12-16 10:06:19] 2025-12-16 09:05:42,539 | INFO     | [job] queue monitor thread has finished
[2025-12-16 10:06:19] 2025-12-16 09:05:42,634 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 10:06:19] 2025-12-16 09:05:46,640 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 10:06:19] 2025-12-16 09:05:49,569 | INFO     | job.realtimelogging is not enabled
[2025-12-16 10:06:19] 2025-12-16 09:05:50,575 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 10:06:19] 2025-12-16 09:06:06,047 | INFO     | [monitor] cgroup control has ended
[2025-12-16 10:06:19] 2025-12-16 09:06:07,050 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22477943760704)>', '<ExcThread(monitor, started 22477503710976)>']
[2025-12-16 10:06:19] 2025-12-16 09:06:10,729 | INFO     | PID=2076510 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 10:06:19] 2025-12-16 09:06:10,729 | INFO     | .. there are 9 such processes running
[2025-12-16 10:06:19] 2025-12-16 09:06:10,730 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 10:06:19] 2025-12-16 09:06:10,731 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 10:06:19] 2025-12-16 09:06:10,731 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 10:06:19] 2025-12-16 09:06:10,731 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 10:06:19] 2025-12-16 09:06:10,731 | INFO     | [monitor] control thread has ended
[2025-12-16 10:06:19] 2025-12-16 09:06:12,071 | INFO     | all workflow threads have been joined
[2025-12-16 10:06:19] 2025-12-16 09:06:12,072 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 10:06:19] 2025-12-16 09:06:12,072 | INFO     | traces error code: 0
[2025-12-16 10:06:19] 2025-12-16 09:06:12,072 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 10:06:19] 2025-12-16 09:06:12,215 [wrapper] ==== pilot stdout END ====
[2025-12-16 10:06:19] 2025-12-16 09:06:12,218 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 10:06:19] 2025-12-16 09:06:12,221 [wrapper] pilotpid: 2076510
[2025-12-16 10:06:19] 2025-12-16 09:06:12,224 [wrapper] Pilot exit status: 0
[2025-12-16 10:06:19] 2025-12-16 09:06:12,239 [wrapper] pandaids: 6929449307
[2025-12-16 10:06:19] 2025-12-16 09:06:12,414 [wrapper] cleanup supervisor_pilot 2432900 2076511
[2025-12-16 10:06:19] 2025-12-16 09:06:12,419 [wrapper] Test setup, not cleaning
[2025-12-16 10:06:19] 2025-12-16 09:06:12,423 [wrapper] apfmon messages muted
[2025-12-16 10:06:19] 2025-12-16 09:06:12,427 [wrapper] ==== wrapper stdout END ====
[2025-12-16 10:06:19] 2025-12-16 09:06:12,432 [wrapper] ==== wrapper stderr END ====
[2025-12-16 10:06:19]  *** Error codes and diagnostics ***
[2025-12-16 10:06:19]     "exeErrorCode": 0,
[2025-12-16 10:06:19]     "exeErrorDiag": "",
[2025-12-16 10:06:19]     "pilotErrorCode": 0,
[2025-12-16 10:06:19]     "pilotErrorDiag": "",
[2025-12-16 10:06:19]  *** Listing of results directory ***
[2025-12-16 10:06:19] total 342216
[2025-12-16 10:06:19] -rw-r--r-- 1 boinc boinc    579449 Dec 14 12:00 pilot3.tar.gz
[2025-12-16 10:06:19] -rwx------ 1 boinc boinc     36322 Dec 14 12:03 runpilot2-wrapper.sh
[2025-12-16 10:06:19] -rw-r--r-- 1 boinc boinc      5112 Dec 14 12:03 queuedata.json
[2025-12-16 10:06:19] -rw-r--r-- 1 boinc boinc       100 Dec 16 07:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 10:06:19] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 07:12 run_atlas
[2025-12-16 10:06:19] -rw-r--r-- 1 boinc boinc       105 Dec 16 07:12 job.xml
[2025-12-16 10:06:19] -rw-r--r-- 2 boinc boinc 194040638 Dec 16 07:12 EVNT.47886929._000145.pool.root.1
[2025-12-16 10:06:19] -rw-r--r-- 1 boinc boinc      6691 Dec 16 07:12 init_data.xml
[2025-12-16 10:06:19] -rw-r--r-- 2 boinc boinc     15847 Dec 16 07:12 start_atlas.sh
[2025-12-16 10:06:19] drwxrwx--x 2 boinc boinc      4096 Dec 16 07:12 shared
[2025-12-16 10:06:19] -rw-r--r-- 2 boinc boinc    592399 Dec 16 07:12 input.tar.gz
[2025-12-16 10:06:19] -rw-r--r-- 1 boinc boinc         0 Dec 16 07:12 boinc_lockfile
[2025-12-16 10:06:19] -rw-r--r-- 1 boinc boinc      2514 Dec 16 07:12 pandaJob.out
[2025-12-16 10:06:19] -rw------- 1 boinc boinc    994531 Dec 16 07:12 agis_schedconf.cvmfs.json
[2025-12-16 10:06:19] -rw------- 1 boinc boinc   1516240 Dec 16 07:12 agis_ddmendpoints.agis.ALL.json
[2025-12-16 10:06:19] drwx------ 5 boinc boinc      4096 Dec 16 07:12 pilot3
[2025-12-16 10:06:19] -rw------- 1 boinc boinc 148897976 Dec 16 10:04 HITS.47886933._003171.pool.root.1
[2025-12-16 10:06:19] -rw-r--r-- 1 boinc boinc       528 Dec 16 10:05 boinc_task_state.xml
[2025-12-16 10:06:19] -rw------- 1 boinc boinc      1031 Dec 16 10:05 memory_monitor_summary.json
[2025-12-16 10:06:19] -rw------- 1 boinc boinc    336959 Dec 16 10:05 log.47886933._003171.job.log.tgz.1
[2025-12-16 10:06:19] -rw------- 1 boinc boinc      7787 Dec 16 10:05 heartbeat.json
[2025-12-16 10:06:19] -rw-r--r-- 1 boinc boinc        26 Dec 16 10:06 wrapper_checkpoint.txt
[2025-12-16 10:06:19] -rw------- 1 boinc boinc        95 Dec 16 10:06 pilot_heartbeat.json
[2025-12-16 10:06:19] -rw------- 1 boinc boinc      4907 Dec 16 10:06 pilotlog.txt
[2025-12-16 10:06:19] -rw------- 1 boinc boinc   1447916 Dec 16 10:06 log.47886933._003171.job.log.1
[2025-12-16 10:06:19] -rw------- 1 boinc boinc       357 Dec 16 10:06 output.list
[2025-12-16 10:06:19] -rw-r--r-- 1 boinc boinc       620 Dec 16 10:06 runtime_log
[2025-12-16 10:06:19] -rw------- 1 boinc boinc   1802240 Dec 16 10:06 result.tar.gz
[2025-12-16 10:06:19] -rw-r--r-- 1 boinc boinc      9223 Dec 16 10:06 runtime_log.err
[2025-12-16 10:06:19] -rw------- 1 boinc boinc       666 Dec 16 10:06 qOHMDm13yo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkUVKDmBaciHn.diag
[2025-12-16 10:06:19] -rw-r--r-- 1 boinc boinc      8192 Dec 16 10:06 boinc_mmap_file
[2025-12-16 10:06:19] -rw-r--r-- 1 boinc boinc     20854 Dec 16 10:06 stderr.txt
[2025-12-16 10:06:19] HITS file was successfully produced:
[2025-12-16 10:06:19] -rw------- 1 boinc boinc 148897976 Dec 16 10:04 shared/HITS.pool.root.1
[2025-12-16 10:06:19]  *** Contents of shared directory: ***
[2025-12-16 10:06:19] total 337272
[2025-12-16 10:06:19] -rw-r--r-- 2 boinc boinc 194040638 Dec 16 07:12 ATLAS.root_0
[2025-12-16 10:06:19] -rw-r--r-- 2 boinc boinc     15847 Dec 16 07:12 start_atlas.sh
[2025-12-16 10:06:19] -rw-r--r-- 2 boinc boinc    592399 Dec 16 07:12 input.tar.gz
[2025-12-16 10:06:19] -rw------- 1 boinc boinc 148897976 Dec 16 10:04 HITS.pool.root.1
[2025-12-16 10:06:19] -rw------- 1 boinc boinc   1802240 Dec 16 10:06 result.tar.gz
10:06:20 (2068892): run_atlas exited; CPU time 40431.816747
10:06:20 (2068892): called boinc_finish(0)

</stderr_txt>
]]>

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