Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:27:36 (29733): wrapper (7.7.26015): starting
17:27:36 (29733): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 17:27:36] Arguments: --nthreads 8
[2025-12-14 17:27:36] Threads: 8
[2025-12-14 17:27:36] Checking for CVMFS
[2025-12-14 17:27:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 17:27:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 17:27:36] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 17:27:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 17:27:37] 2.11.2.0 2934 203343 81572 154010 3 56 10497250 20275200 1 130560 1 74122471 99.940 9851446 24420 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 17:27:37] CVMFS is ok
[2025-12-14 17:27:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 17:27:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 17:27:37] Further information can be found at the LHC@home message board.
[2025-12-14 17:27:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 17:27:37] Checking for apptainer binary...
[2025-12-14 17:27:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 17:27:37] Running /usr/bin/apptainer --version
[2025-12-14 17:27:37] apptainer version 1.3.2-1.el7
[2025-12-14 17:27:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 17:27:38] c-204-33.aglt2.org
[2025-12-14 17:27:38] apptainer works
[2025-12-14 17:27:38] Set ATHENA_PROC_NUMBER=8
[2025-12-14 17:27:38] Set ATHENA_CORE_NUMBER=8
[2025-12-14 17:27:38] Starting ATLAS job with PandaID=6929410377
[2025-12-14 17:27:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 20:22:19]  *** The last 200 lines of the pilot log: ***
[2025-12-14 20:22:19] 2025-12-15 01:21:43,102 | INFO     | time since job start (10426s) is within the limit (174528.0s)
[2025-12-14 20:22:19] 2025-12-15 01:21:43,275 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-14 20:22:19] 2025-12-15 01:21:43,279 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-12-14 20:22:19] 2025-12-15 01:21:43,281 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929410377/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 20:22:19] 2025-12-15 01:21:43,282 | INFO     | extracted standard info from prmon json
[2025-12-14 20:22:19] 2025-12-15 01:21:43,282 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 20:22:19] 2025-12-15 01:21:43,282 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 20:22:19] 2025-12-15 01:21:43,283 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 20:22:19] 2025-12-15 01:21:43,283 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 20:22:19] 2025-12-15 01:21:43,287 | INFO     | fitting pss+swap vs Time
[2025-12-14 20:22:19] 2025-12-15 01:21:43,288 | INFO     | sum of square deviations: 1550429070.0
[2025-12-14 20:22:19] 2025-12-15 01:21:43,289 | INFO     | sum of deviations: -21049494053.0
[2025-12-14 20:22:19] 2025-12-15 01:21:43,289 | INFO     | mean x: 1765756494.0
[2025-12-14 20:22:19] 2025-12-15 01:21:43,289 | INFO     | mean y: 2516857.5029239766
[2025-12-14 20:22:19] 2025-12-15 01:21:43,289 | INFO     | intersect: 23975416707.412945
[2025-12-14 20:22:19] 2025-12-15 01:21:43,290 | INFO     | chi2: 2.381433279599046
[2025-12-14 20:22:19] 2025-12-15 01:21:43,290 | INFO     | sum of square deviations: 1418361477.5
[2025-12-14 20:22:19] 2025-12-15 01:21:43,291 | INFO     | sum of deviations: -8941291732.999998
[2025-12-14 20:22:19] 2025-12-15 01:21:43,291 | INFO     | mean x: 1765756341.5
[2025-12-14 20:22:19] 2025-12-15 01:21:43,291 | INFO     | mean y: 2530530.0843373495
[2025-12-14 20:22:19] 2025-12-15 01:21:43,291 | INFO     | intersect: 11133785029.871239
[2025-12-14 20:22:19] 2025-12-15 01:21:43,291 | INFO     | chi2: 1.6165350057887957
[2025-12-14 20:22:19] 2025-12-15 01:21:43,292 | INFO     | current chi2=1.6165350057887957 (change=32.11924013840244 %)
[2025-12-14 20:22:19] 2025-12-15 01:21:43,292 | INFO     | sum of square deviations: 1294014960.0
[2025-12-14 20:22:19] 2025-12-15 01:21:43,293 | INFO     | sum of deviations: -8407197814.999999
[2025-12-14 20:22:19] 2025-12-15 01:21:43,293 | INFO     | mean x: 1765756189.0
[2025-12-14 20:22:19] 2025-12-15 01:21:43,293 | INFO     | mean y: 2531185.347826087
[2025-12-14 20:22:19] 2025-12-15 01:21:43,293 | INFO     | intersect: 11474625429.129618
[2025-12-14 20:22:19] 2025-12-15 01:21:43,293 | INFO     | chi2: 1.6157117732285085
[2025-12-14 20:22:19] 2025-12-15 01:21:43,294 | INFO     | current chi2=1.6157117732285085 (change=0.05092574904590872 %)
[2025-12-14 20:22:19] 2025-12-15 01:21:43,294 | INFO     | right removable region: 160
[2025-12-14 20:22:19] 2025-12-15 01:21:43,294 | INFO     | sum of square deviations: 1418361477.5
[2025-12-14 20:22:19] 2025-12-15 01:21:43,295 | INFO     | sum of deviations: -46038671825.0
[2025-12-14 20:22:19] 2025-12-15 01:21:43,295 | INFO     | mean x: 1765756646.5
[2025-12-14 20:22:19] 2025-12-15 01:21:43,295 | INFO     | mean y: 2545312.9277108433
[2025-12-14 20:22:19] 2025-12-15 01:21:43,295 | INFO     | intersect: 57317335696.48566
[2025-12-14 20:22:19] 2025-12-15 01:21:43,296 | INFO     | chi2: 0.969192168617287
[2025-12-14 20:22:19] 2025-12-15 01:21:43,296 | INFO     | current chi2=0.969192168617287 (change=59.302148965497516 %)
[2025-12-14 20:22:19] 2025-12-15 01:21:43,296 | INFO     | sum of square deviations: 1294014960.0
[2025-12-14 20:22:19] 2025-12-15 01:21:43,297 | INFO     | sum of deviations: -43431496750.0
[2025-12-14 20:22:19] 2025-12-15 01:21:43,297 | INFO     | mean x: 1765756799.0
[2025-12-14 20:22:19] 2025-12-15 01:21:43,297 | INFO     | mean y: 2542063.3416149067
[2025-12-14 20:22:19] 2025-12-15 01:21:43,297 | INFO     | intersect: 59267282462.52441
[2025-12-14 20:22:19] 2025-12-15 01:21:43,298 | INFO     | chi2: 0.9592264572743872
[2025-12-14 20:22:19] 2025-12-15 01:21:43,298 | INFO     | current chi2=0.9592264572743872 (change=1.0282492642421517 %)
[2025-12-14 20:22:19] 2025-12-15 01:21:43,298 | INFO     | left removable region: 20
[2025-12-14 20:22:19] 2025-12-15 01:21:43,298 | INFO     | sum of square deviations: 850825255.0
[2025-12-14 20:22:19] 2025-12-15 01:21:43,299 | INFO     | sum of deviations: -20737194762.5
[2025-12-14 20:22:19] 2025-12-15 01:21:43,299 | INFO     | mean x: 1765756768.5
[2025-12-14 20:22:19] 2025-12-15 01:21:43,299 | INFO     | mean y: 2544797.9785714285
[2025-12-14 20:22:19] 2025-12-15 01:21:43,299 | INFO     | intersect: 43039398483.74172
[2025-12-14 20:22:19] 2025-12-15 01:21:43,299 | INFO     | chi2: 0.1453958861732492
[2025-12-14 20:22:19] 2025-12-15 01:21:43,300 | INFO     | current memory leak: -24.37 B/s (using 140 data points, chi2=0.15)
[2025-12-14 20:22:19] 2025-12-15 01:21:43,300 | INFO     | could have reported an average CPU frequency of 2030 MHz (9 samples)
[2025-12-14 20:22:19] 2025-12-15 01:21:43,300 | INFO     | ..............................
[2025-12-14 20:22:19] 2025-12-15 01:21:43,300 | INFO     | . Timing measurements:
[2025-12-14 20:22:19] 2025-12-15 01:21:43,300 | INFO     | . get job = 0 s
[2025-12-14 20:22:19] 2025-12-15 01:21:43,300 | INFO     | . initial setup = 2 s
[2025-12-14 20:22:19] 2025-12-15 01:21:43,301 | INFO     | . payload setup = 8 s
[2025-12-14 20:22:19] 2025-12-15 01:21:43,301 | INFO     | . stage-in = 0 s
[2025-12-14 20:22:19] 2025-12-15 01:21:43,301 | INFO     | . payload execution = 10385 s
[2025-12-14 20:22:19] 2025-12-15 01:21:43,301 | INFO     | . stage-out = 0 s
[2025-12-14 20:22:19] 2025-12-15 01:21:43,301 | INFO     | . log creation = 0 s
[2025-12-14 20:22:19] 2025-12-15 01:21:43,301 | INFO     | ..............................
[2025-12-14 20:22:19] 2025-12-15 01:21:43,389 | INFO     | 
[2025-12-14 20:22:19] 2025-12-15 01:21:43,390 | INFO     | job summary report
[2025-12-14 20:22:19] 2025-12-15 01:21:43,390 | INFO     | --------------------------------------------------
[2025-12-14 20:22:19] 2025-12-15 01:21:43,390 | INFO     | PanDA job id: 6929410377
[2025-12-14 20:22:19] 2025-12-15 01:21:43,390 | INFO     | task id: 47898836
[2025-12-14 20:22:19] 2025-12-15 01:21:43,390 | INFO     | errors: (none)
[2025-12-14 20:22:19] 2025-12-15 01:21:43,391 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 20:22:19] 2025-12-15 01:21:43,391 | INFO     | pilot state: finished 
[2025-12-14 20:22:19] 2025-12-15 01:21:43,391 | INFO     | transexitcode: 0
[2025-12-14 20:22:19] 2025-12-15 01:21:43,391 | INFO     | exeerrorcode: 0
[2025-12-14 20:22:19] 2025-12-15 01:21:43,391 | INFO     | exeerrordiag: 
[2025-12-14 20:22:19] 2025-12-15 01:21:43,391 | INFO     | exitcode: 0
[2025-12-14 20:22:19] 2025-12-15 01:21:43,392 | INFO     | exitmsg: OK
[2025-12-14 20:22:19] 2025-12-15 01:21:43,392 | INFO     | cpuconsumptiontime: 78534 s
[2025-12-14 20:22:19] 2025-12-15 01:21:43,392 | INFO     | nevents: 400
[2025-12-14 20:22:19] 2025-12-15 01:21:43,392 | INFO     | neventsw: 0
[2025-12-14 20:22:19] 2025-12-15 01:21:43,392 | INFO     | pid: 7987
[2025-12-14 20:22:19] 2025-12-15 01:21:43,392 | INFO     | pgrp: 7987
[2025-12-14 20:22:19] 2025-12-15 01:21:43,393 | INFO     | corecount: 8
[2025-12-14 20:22:19] 2025-12-15 01:21:43,393 | INFO     | event service: False
[2025-12-14 20:22:19] 2025-12-15 01:21:43,393 | INFO     | sizes: {0: 2284008, 6: 2284270, 11: 2284298, 10396: 2313029, 10397: 2313028, 10399: 2322082, 10400: 2322266, 10408: 2322524}
[2025-12-14 20:22:19] 2025-12-15 01:21:43,393 | INFO     | --------------------------------------------------
[2025-12-14 20:22:19] 2025-12-15 01:21:43,393 | INFO     | 
[2025-12-14 20:22:19] 2025-12-15 01:21:43,393 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-14 20:22:19] 2025-12-15 01:21:43,422 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 20:22:19] 2025-12-15 01:21:43,422 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 20:22:19] 2025-12-15 01:21:43,422 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 20:22:19] 2025-12-15 01:21:43,423 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 20:22:19] 2025-12-15 01:21:43,423 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 20:22:19] 2025-12-15 01:21:43,423 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 20:22:19] 2025-12-15 01:21:43,423 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 20:22:19] 2025-12-15 01:21:43,423 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 20:22:19] 2025-12-15 01:21:43,423 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 20:22:19] 2025-12-15 01:21:43,423 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 20:22:19] 2025-12-15 01:21:43,423 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 20:22:19] 2025-12-15 01:21:43,424 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 20:22:19] 2025-12-15 01:21:43,424 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 20:22:19] 2025-12-15 01:21:43,424 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 20:22:19] 2025-12-15 01:21:43,424 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 20:22:19] 2025-12-15 01:21:43,424 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 20:22:19] 2025-12-15 01:21:43,424 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 20:22:19] 2025-12-15 01:21:43,424 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 20:22:19] 2025-12-15 01:21:43,424 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 20:22:19] 2025-12-15 01:21:43,425 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 20:22:19] 2025-12-15 01:21:43,425 | INFO     | job 6929410377 has completed (purged errors)
[2025-12-14 20:22:19] 2025-12-15 01:21:43,425 | INFO     | overall cleanup function is called
[2025-12-14 20:22:19] 2025-12-15 01:21:44,220 | INFO     | PID=1351 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-14 20:22:19] 2025-12-15 01:21:44,433 | INFO     | --- collectZombieJob: --- 10, [7987]
[2025-12-14 20:22:19] 2025-12-15 01:21:44,433 | INFO     | zombie collector waiting for pid 7987
[2025-12-14 20:22:19] 2025-12-15 01:21:44,433 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 20:22:19] 2025-12-15 01:21:44,433 | INFO     | collected zombie processes
[2025-12-14 20:22:19] 2025-12-15 01:21:44,434 | INFO     | will attempt to kill all subprocesses of pid=7987
[2025-12-14 20:22:19] 2025-12-15 01:21:44,521 | INFO     | process IDs to be killed: [7987] (in reverse order)
[2025-12-14 20:22:19] 2025-12-15 01:21:44,579 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 20:22:19] 2025-12-15 01:21:44,580 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 20:22:19] 2025-12-15 01:21:44,584 | INFO     | did not find any defunct processes belonging to 7987
[2025-12-14 20:22:19] 2025-12-15 01:21:44,587 | INFO     | did not find any defunct processes belonging to 7987
[2025-12-14 20:22:19] 2025-12-15 01:21:44,588 | INFO     | ready for new job
[2025-12-14 20:22:19] 2025-12-15 01:21:44,588 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 20:22:19] 2025-12-15 01:21:44,589 | INFO     | ***************************************
[2025-12-14 20:22:19] 2025-12-15 01:21:44,589 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 20:22:19] 2025-12-15 01:21:44,590 | INFO     | ***************************************
[2025-12-14 20:22:19] 2025-12-15 01:21:44,590 | INFO     | 
[2025-12-14 20:22:19] 2025-12-15 01:21:44,590 | INFO     | architecture information:
[2025-12-14 20:22:19] 2025-12-15 01:21:44,591 | INFO     | executing command: cat /etc/os-release
[2025-12-14 20:22:19] 2025-12-15 01:21:44,609 | INFO     | cat /etc/os-release:
[2025-12-14 20:22:19] NAME="CentOS Linux"
[2025-12-14 20:22:19] VERSION="7 (Core)"
[2025-12-14 20:22:19] ID="centos"
[2025-12-14 20:22:19] ID_LIKE="rhel fedora"
[2025-12-14 20:22:19] VERSION_ID="7"
[2025-12-14 20:22:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 20:22:19] ANSI_COLOR="0;31"
[2025-12-14 20:22:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 20:22:19] HOME_URL="https://www.centos.org/"
[2025-12-14 20:22:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 20:22:19] 
[2025-12-14 20:22:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 20:22:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 20:22:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 20:22:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 20:22:19] 
[2025-12-14 20:22:19] 2025-12-15 01:21:44,610 | INFO     | ***************************************
[2025-12-14 20:22:19] 2025-12-15 01:21:45,113 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-14 20:22:19] 2025-12-15 01:21:45,132 | INFO     | sufficient remaining disk space (18580766720 B)
[2025-12-14 20:22:19] 2025-12-15 01:21:45,133 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 20:22:19] 2025-12-15 01:21:45,133 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 20:22:19] 2025-12-15 01:21:45,133 | INFO     | update_server=False
[2025-12-14 20:22:19] 2025-12-15 01:21:45,133 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 20:22:19] 2025-12-15 01:21:45,134 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 20:22:19] 2025-12-15 01:21:45,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 20:22:19] 2025-12-15 01:21:45,134 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-14 20:22:19] 2025-12-15 01:21:45,135 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 20:22:19] 2025-12-15 01:21:45,135 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 20:22:19] 2025-12-15 01:21:45,135 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 20:22:19] 2025-12-15 01:21:45,286 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 20:22:19] 2025-12-15 01:21:45,356 | INFO     | all job control threads have been joined
[2025-12-14 20:22:19] 2025-12-15 01:21:45,551 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 20:22:19] 2025-12-15 01:21:45,551 | INFO     | aborting loop
[2025-12-14 20:22:19] 2025-12-15 01:21:45,560 | INFO     | all data control threads have been joined
[2025-12-14 20:22:19] 2025-12-15 01:21:45,801 | INFO     | all payload control threads have been joined
[2025-12-14 20:22:19] 2025-12-15 01:21:46,139 | INFO     | [job] retrieve thread has finished
[2025-12-14 20:22:19] 2025-12-15 01:21:46,140 | INFO     | [job] queue monitor thread has finished
[2025-12-14 20:22:19] 2025-12-15 01:21:46,362 | INFO     | [job] control thread has finished
[2025-12-14 20:22:19] 2025-12-15 01:21:46,557 | INFO     | [job] job monitor thread has finished
[2025-12-14 20:22:19] 2025-12-15 01:21:46,566 | INFO     | [data] control thread has finished
[2025-12-14 20:22:19] 2025-12-15 01:21:46,601 | INFO     | [job] validate thread has finished
[2025-12-14 20:22:19] 2025-12-15 01:21:46,765 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 20:22:19] 2025-12-15 01:21:46,791 | INFO     | [data] copytool_in thread has finished
[2025-12-14 20:22:19] 2025-12-15 01:21:46,804 | INFO     | [payload] failed_post thread has finished
[2025-12-14 20:22:19] 2025-12-15 01:21:46,806 | INFO     | [payload] control thread has finished
[2025-12-14 20:22:19] 2025-12-15 01:21:47,098 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 20:22:19] 2025-12-15 01:21:47,140 | INFO     | [data] copytool_out thread has finished
[2025-12-14 20:22:19] 2025-12-15 01:21:47,328 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 20:22:19] 2025-12-15 01:21:47,409 | INFO     | [payload] validate_post thread has finished
[2025-12-14 20:22:19] 2025-12-15 01:21:49,292 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 20:22:19] 2025-12-15 01:21:55,337 | INFO     | job.realtimelogging is not enabled
[2025-12-14 20:22:19] 2025-12-15 01:21:56,342 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 20:22:19] 2025-12-15 01:22:13,798 | INFO     | [monitor] cgroup control has ended
[2025-12-14 20:22:19] 2025-12-15 01:22:14,512 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139766340863808)>', '<ExcThread(monitor, started 139765517104896)>']
[2025-12-14 20:22:19] 2025-12-15 01:22:15,259 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 20:22:19] 2025-12-15 01:22:15,259 | INFO     | [monitor] control thread has ended
[2025-12-14 20:22:19] 2025-12-15 01:22:19,525 | INFO     | all workflow threads have been joined
[2025-12-14 20:22:19] 2025-12-15 01:22:19,525 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 20:22:19] 2025-12-15 01:22:19,526 | INFO     | traces error code: 0
[2025-12-14 20:22:19] 2025-12-15 01:22:19,526 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 20:22:19] 2025-12-15 01:22:19,635 [wrapper] ==== pilot stdout END ====
[2025-12-14 20:22:19] 2025-12-15 01:22:19,640 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 20:22:19] 2025-12-15 01:22:19,645 [wrapper] pilotpid: 1351
[2025-12-14 20:22:19] 2025-12-15 01:22:19,650 [wrapper] Pilot exit status: 0
[2025-12-14 20:22:19] 2025-12-15 01:22:19,668 [wrapper] pandaids: 6929410377
[2025-12-14 20:22:19] 2025-12-15 01:22:19,712 [wrapper] cleanup supervisor_pilot 15464 1352
[2025-12-14 20:22:19] 2025-12-15 01:22:19,717 [wrapper] Test setup, not cleaning
[2025-12-14 20:22:19] 2025-12-15 01:22:19,721 [wrapper] apfmon messages muted
[2025-12-14 20:22:19] 2025-12-15 01:22:19,725 [wrapper] ==== wrapper stdout END ====
[2025-12-14 20:22:19] 2025-12-15 01:22:19,730 [wrapper] ==== wrapper stderr END ====
[2025-12-14 20:22:19]  *** Error codes and diagnostics ***
[2025-12-14 20:22:19]     "exeErrorCode": 0,
[2025-12-14 20:22:19]     "exeErrorDiag": "",
[2025-12-14 20:22:19]     "pilotErrorCode": 0,
[2025-12-14 20:22:19]     "pilotErrorDiag": "",
[2025-12-14 20:22:19]  *** Listing of results directory ***
[2025-12-14 20:22:19] total 412796
[2025-12-14 20:22:19] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 23:46 pilot3.tar.gz
[2025-12-14 20:22:19] -rwx------ 1 boincer umatlas     36322 Dec 13 23:47 runpilot2-wrapper.sh
[2025-12-14 20:22:19] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 23:48 queuedata.json
[2025-12-14 20:22:19] -rw-r--r-- 1 boincer umatlas       100 Dec 14 17:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 20:22:19] -rwxr-xr-x 1 boincer umatlas      7986 Dec 14 17:27 run_atlas
[2025-12-14 20:22:19] -rw-r--r-- 1 boincer umatlas       105 Dec 14 17:27 job.xml
[2025-12-14 20:22:19] -rw-r--r-- 2 boincer umatlas 215189540 Dec 14 17:27 EVNT.47898833._000109.pool.root.1
[2025-12-14 20:22:19] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 17:27 start_atlas.sh
[2025-12-14 20:22:19] drwxrwx--x 2 boincer umatlas      4096 Dec 14 17:27 shared
[2025-12-14 20:22:19] -rw-r--r-- 2 boincer umatlas    592396 Dec 14 17:27 input.tar.gz
[2025-12-14 20:22:19] -rw-r--r-- 1 boincer umatlas         0 Dec 14 17:27 boinc_lockfile
[2025-12-14 20:22:19] -rw-r--r-- 1 boincer umatlas      2550 Dec 14 17:27 pandaJob.out
[2025-12-14 20:22:19] -rw------- 1 boincer umatlas        57 Dec 14 17:27 setup.sh.local
[2025-12-14 20:22:19] -rw------- 1 boincer umatlas    991024 Dec 14 17:27 agis_schedconf.cvmfs.json
[2025-12-14 20:22:19] -rw------- 1 boincer umatlas   1516240 Dec 14 17:27 agis_ddmendpoints.agis.ALL.json
[2025-12-14 20:22:19] drwx------ 5 boincer umatlas      4096 Dec 14 17:27 pilot3
[2025-12-14 20:22:19] -rw-r--r-- 1 boincer umatlas      5909 Dec 14 20:12 init_data.xml
[2025-12-14 20:22:19] -rw------- 1 boincer umatlas 199906876 Dec 14 20:20 HITS.47898836._002715.pool.root.1
[2025-12-14 20:22:19] -rw-r--r-- 1 boincer umatlas       530 Dec 14 20:21 boinc_task_state.xml
[2025-12-14 20:22:19] -rw------- 1 boincer umatlas        95 Dec 14 20:21 pilot_heartbeat.json
[2025-12-14 20:22:19] -rw------- 1 boincer umatlas      1050 Dec 14 20:21 memory_monitor_summary.json
[2025-12-14 20:22:19] -rw------- 1 boincer umatlas    406043 Dec 14 20:21 log.47898836._002715.job.log.tgz.1
[2025-12-14 20:22:19] -rw------- 1 boincer umatlas      7847 Dec 14 20:21 heartbeat.json
[2025-12-14 20:22:19] -rw-r--r-- 1 boincer umatlas      8192 Dec 14 20:22 boinc_mmap_file
[2025-12-14 20:22:19] -rw-r--r-- 1 boincer umatlas        28 Dec 14 20:22 wrapper_checkpoint.txt
[2025-12-14 20:22:19] -rw------- 1 boincer umatlas      4624 Dec 14 20:22 pilotlog.txt
[2025-12-14 20:22:19] -rw------- 1 boincer umatlas   1443123 Dec 14 20:22 log.47898836._002715.job.log.1
[2025-12-14 20:22:19] -rw------- 1 boincer umatlas       357 Dec 14 20:22 output.list
[2025-12-14 20:22:19] -rw-r--r-- 1 boincer umatlas       620 Dec 14 20:22 runtime_log
[2025-12-14 20:22:19] -rw------- 1 boincer umatlas   1863680 Dec 14 20:22 result.tar.gz
[2025-12-14 20:22:19] -rw------- 1 boincer umatlas       662 Dec 14 20:22 zFWLDmWCto8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmytUKDmth5zKm.diag
[2025-12-14 20:22:19] -rw-r--r-- 1 boincer umatlas      9343 Dec 14 20:22 runtime_log.err
[2025-12-14 20:22:19] -rw-r--r-- 1 boincer umatlas     21067 Dec 14 20:22 stderr.txt
[2025-12-14 20:22:19] HITS file was successfully produced:
[2025-12-14 20:22:19] -rw------- 1 boincer umatlas 199906876 Dec 14 20:20 shared/HITS.pool.root.1
[2025-12-14 20:22:19]  *** Contents of shared directory: ***
[2025-12-14 20:22:19] total 407788
[2025-12-14 20:22:19] -rw-r--r-- 2 boincer umatlas 215189540 Dec 14 17:27 ATLAS.root_0
[2025-12-14 20:22:19] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 17:27 start_atlas.sh
[2025-12-14 20:22:19] -rw-r--r-- 2 boincer umatlas    592396 Dec 14 17:27 input.tar.gz
[2025-12-14 20:22:19] -rw------- 1 boincer umatlas 199906876 Dec 14 20:20 HITS.pool.root.1
[2025-12-14 20:22:19] -rw------- 1 boincer umatlas   1863680 Dec 14 20:22 result.tar.gz
20:22:21 (29733): run_atlas exited; CPU time 78482.102947
20:22:21 (29733): called boinc_finish(0)

</stderr_txt>
]]>

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