Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:53:31 (4109086): wrapper (7.7.26015): starting
18:53:31 (4109086): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 18:53:31] Arguments: --nthreads 8
[2025-12-14 18:53:31] Threads: 8
[2025-12-14 18:53:31] Checking for CVMFS
[2025-12-14 18:53:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 18:53:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 18:53:52] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 18:53:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 18:53:54] 2.13.3.0 9435 56521 324372 154012 2 435 22194112 32935937 11425 16776704 0 280382281 99.709 206064862 32791 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-14 18:53:54] CVMFS is ok
[2025-12-14 18:53:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 18:53:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 18:53:54] Further information can be found at the LHC@home message board.
[2025-12-14 18:53:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 18:53:54] Checking for apptainer binary...
[2025-12-14 18:53:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 18:53:54] Running /usr/bin/apptainer --version
[2025-12-14 18:53:54] apptainer version 1.4.5-2.el9
[2025-12-14 18:53:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 18:53:55] c-8-17.aglt2.org
[2025-12-14 18:53:55] apptainer works
[2025-12-14 18:53:55] Set ATHENA_PROC_NUMBER=8
[2025-12-14 18:53:55] Set ATHENA_CORE_NUMBER=8
[2025-12-14 18:53:56] Starting ATLAS job with PandaID=6930660105
[2025-12-14 18:53:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 23:48:38]  *** The last 200 lines of the pilot log: ***
[2025-12-14 23:48:38] 2025-12-15 04:47:56,746 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-14 23:48:38] 2025-12-15 04:47:56,771 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1968750000005
[2025-12-14 23:48:38] 2025-12-15 04:47:56,780 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6930660105/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 23:48:38] 2025-12-15 04:47:56,796 | INFO     | extracted standard info from prmon json
[2025-12-14 23:48:38] 2025-12-15 04:47:56,796 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 23:48:38] 2025-12-15 04:47:56,796 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 23:48:38] 2025-12-15 04:47:56,797 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 23:48:38] 2025-12-15 04:47:56,797 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 23:48:38] 2025-12-15 04:47:56,831 | INFO     | fitting pss+swap vs Time
[2025-12-14 23:48:38] 2025-12-15 04:47:56,840 | INFO     | sum of square deviations: 7253698498.85314
[2025-12-14 23:48:38] 2025-12-15 04:47:56,851 | INFO     | sum of deviations: 17165505473.811146
[2025-12-14 23:48:38] 2025-12-15 04:47:56,851 | INFO     | mean x: 1765765337.7412589
[2025-12-14 23:48:38] 2025-12-15 04:47:56,851 | INFO     | mean y: 2531126.0244755247
[2025-12-14 23:48:38] 2025-12-15 04:47:56,852 | INFO     | intersect: -4176061984.1324778
[2025-12-14 23:48:38] 2025-12-15 04:47:56,852 | INFO     | chi2: 2.7210610405952065
[2025-12-14 23:48:38] 2025-12-15 04:47:56,852 | INFO     | sum of square deviations: 6879932431.551634
[2025-12-14 23:48:38] 2025-12-15 04:47:56,870 | INFO     | sum of deviations: 35572300450.31675
[2025-12-14 23:48:38] 2025-12-15 04:47:56,871 | INFO     | mean x: 1765765185.2562277
[2025-12-14 23:48:38] 2025-12-15 04:47:56,871 | INFO     | mean y: 2538522.6761565837
[2025-12-14 23:48:38] 2025-12-15 04:47:56,871 | INFO     | intersect: -9127250224.46095
[2025-12-14 23:48:38] 2025-12-15 04:47:56,872 | INFO     | chi2: 1.9449301983402845
[2025-12-14 23:48:38] 2025-12-15 04:47:56,872 | INFO     | current chi2=1.9449301983402845 (change=28.52309561145129 %)
[2025-12-14 23:48:38] 2025-12-15 04:47:56,872 | INFO     | sum of square deviations: 6519253150.072482
[2025-12-14 23:48:38] 2025-12-15 04:47:56,891 | INFO     | sum of deviations: 34096743237.869556
[2025-12-14 23:48:38] 2025-12-15 04:47:56,896 | INFO     | mean x: 1765765032.7753623
[2025-12-14 23:48:38] 2025-12-15 04:47:56,896 | INFO     | mean y: 2537898.804347826
[2025-12-14 23:48:38] 2025-12-15 04:47:56,896 | INFO     | intersect: -9232697419.56651
[2025-12-14 23:48:38] 2025-12-15 04:47:56,897 | INFO     | chi2: 1.9453617076234853
[2025-12-14 23:48:38] 2025-12-15 04:47:56,897 | INFO     | current chi2=1.9453617076234853 (change=-0.022186363478186685 %)
[2025-12-14 23:48:38] 2025-12-15 04:47:56,897 | INFO     | right removable region: 275
[2025-12-14 23:48:38] 2025-12-15 04:47:56,898 | INFO     | sum of square deviations: 6879750648.512455
[2025-12-14 23:48:38] 2025-12-15 04:47:56,904 | INFO     | sum of deviations: -35386918588.12098
[2025-12-14 23:48:38] 2025-12-15 04:47:56,904 | INFO     | mean x: 1765765490.2633452
[2025-12-14 23:48:38] 2025-12-15 04:47:56,905 | INFO     | mean y: 2552418.2989323842
[2025-12-14 23:48:38] 2025-12-15 04:47:56,905 | INFO     | intersect: 9085003635.215214
[2025-12-14 23:48:38] 2025-12-15 04:47:56,905 | INFO     | chi2: 1.0000935879222725
[2025-12-14 23:48:38] 2025-12-15 04:47:56,905 | INFO     | current chi2=1.0000935879222725 (change=63.246190621893895 %)
[2025-12-14 23:48:38] 2025-12-15 04:47:56,906 | INFO     | sum of square deviations: 6518872810.387695
[2025-12-14 23:48:38] 2025-12-15 04:47:56,908 | INFO     | sum of deviations: -31802360140.199287
[2025-12-14 23:48:38] 2025-12-15 04:47:56,908 | INFO     | mean x: 1765765642.786232
[2025-12-14 23:48:38] 2025-12-15 04:47:56,909 | INFO     | mean y: 2550872.894927536
[2025-12-14 23:48:38] 2025-12-15 04:47:56,909 | INFO     | intersect: 8616849161.64134
[2025-12-14 23:48:38] 2025-12-15 04:47:56,909 | INFO     | chi2: 0.976367317509681
[2025-12-14 23:48:38] 2025-12-15 04:47:56,909 | INFO     | current chi2=0.976367317509681 (change=2.3724050128032195 %)
[2025-12-14 23:48:38] 2025-12-15 04:47:56,909 | INFO     | left removable region: 20
[2025-12-14 23:48:38] 2025-12-15 04:47:56,910 | INFO     | sum of square deviations: 5141156300.525506
[2025-12-14 23:48:38] 2025-12-15 04:47:56,912 | INFO     | sum of deviations: 11567614110.262741
[2025-12-14 23:48:38] 2025-12-15 04:47:56,912 | INFO     | mean x: 1765765612.3568628
[2025-12-14 23:48:38] 2025-12-15 04:47:56,912 | INFO     | mean y: 2546279.6784313726
[2025-12-14 23:48:38] 2025-12-15 04:47:56,912 | INFO     | intersect: -3970430618.6952186
[2025-12-14 23:48:38] 2025-12-15 04:47:56,964 | INFO     | chi2: 0.002676075112561058
[2025-12-14 23:48:38] 2025-12-15 04:47:56,964 | INFO     | current memory leak: 2.25 B/s (using 255 data points, chi2=0.00)
[2025-12-14 23:48:38] 2025-12-15 04:47:56,965 | INFO     | could have reported an average CPU frequency of 2600 MHz (13 samples)
[2025-12-14 23:48:38] 2025-12-15 04:47:56,965 | INFO     | ..............................
[2025-12-14 23:48:38] 2025-12-15 04:47:56,966 | INFO     | . Timing measurements:
[2025-12-14 23:48:38] 2025-12-15 04:47:56,966 | INFO     | . get job = 0 s
[2025-12-14 23:48:38] 2025-12-15 04:47:56,966 | INFO     | . initial setup = 8 s
[2025-12-14 23:48:38] 2025-12-15 04:47:56,966 | INFO     | . payload setup = 41 s
[2025-12-14 23:48:38] 2025-12-15 04:47:56,966 | INFO     | . stage-in = 0 s
[2025-12-14 23:48:38] 2025-12-15 04:47:56,966 | INFO     | . payload execution = 17442 s
[2025-12-14 23:48:38] 2025-12-15 04:47:56,966 | INFO     | . stage-out = 3 s
[2025-12-14 23:48:38] 2025-12-15 04:47:56,966 | INFO     | . log creation = 0 s
[2025-12-14 23:48:38] 2025-12-15 04:47:56,966 | INFO     | ..............................
[2025-12-14 23:48:38] 2025-12-15 04:47:57,379 | INFO     | 
[2025-12-14 23:48:38] 2025-12-15 04:47:57,379 | INFO     | job summary report
[2025-12-14 23:48:38] 2025-12-15 04:47:57,379 | INFO     | --------------------------------------------------
[2025-12-14 23:48:38] 2025-12-15 04:47:57,379 | INFO     | PanDA job id: 6930660105
[2025-12-14 23:48:38] 2025-12-15 04:47:57,379 | INFO     | task id: 47898878
[2025-12-14 23:48:38] 2025-12-15 04:47:57,379 | INFO     | errors: (none)
[2025-12-14 23:48:38] 2025-12-15 04:47:57,380 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 23:48:38] 2025-12-15 04:47:57,380 | INFO     | pilot state: finished 
[2025-12-14 23:48:38] 2025-12-15 04:47:57,380 | INFO     | transexitcode: 0
[2025-12-14 23:48:38] 2025-12-15 04:47:57,380 | INFO     | exeerrorcode: 0
[2025-12-14 23:48:38] 2025-12-15 04:47:57,380 | INFO     | exeerrordiag: 
[2025-12-14 23:48:38] 2025-12-15 04:47:57,380 | INFO     | exitcode: 0
[2025-12-14 23:48:38] 2025-12-15 04:47:57,380 | INFO     | exitmsg: OK
[2025-12-14 23:48:38] 2025-12-15 04:47:57,380 | INFO     | cpuconsumptiontime: 46142 s
[2025-12-14 23:48:38] 2025-12-15 04:47:57,380 | INFO     | nevents: 400
[2025-12-14 23:48:38] 2025-12-15 04:47:57,381 | INFO     | neventsw: 0
[2025-12-14 23:48:38] 2025-12-15 04:47:57,381 | INFO     | pid: 4134726
[2025-12-14 23:48:38] 2025-12-15 04:47:57,381 | INFO     | pgrp: 4134726
[2025-12-14 23:48:38] 2025-12-15 04:47:57,381 | INFO     | corecount: 8
[2025-12-14 23:48:38] 2025-12-15 04:47:57,381 | INFO     | event service: False
[2025-12-14 23:48:38] 2025-12-15 04:47:57,381 | INFO     | sizes: {0: 2283666, 1: 2283722, 2: 2283778, 3: 2283977, 15: 2283977, 27: 2284005, 36: 2284423, 38: 2284451, 17487: 2316454, 17492: 2325452, 17494: 2325508, 17506: 
[2025-12-14 23:48:38] 2025-12-15 04:47:57,381 | INFO     | --------------------------------------------------
[2025-12-14 23:48:38] 2025-12-15 04:47:57,381 | INFO     | 
[2025-12-14 23:48:38] 2025-12-15 04:47:57,382 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-14 23:48:38] 2025-12-15 04:47:57,619 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 23:48:38] 2025-12-15 04:47:57,620 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 23:48:38] 2025-12-15 04:47:57,620 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 23:48:38] 2025-12-15 04:47:57,620 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 23:48:38] 2025-12-15 04:47:57,620 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 23:48:38] 2025-12-15 04:47:57,620 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 23:48:38] 2025-12-15 04:47:57,620 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 23:48:38] 2025-12-15 04:47:57,620 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 23:48:38] 2025-12-15 04:47:57,620 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 23:48:38] 2025-12-15 04:47:57,621 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 23:48:38] 2025-12-15 04:47:57,621 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 23:48:38] 2025-12-15 04:47:57,621 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 23:48:38] 2025-12-15 04:47:57,621 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 23:48:38] 2025-12-15 04:47:57,621 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 23:48:38] 2025-12-15 04:47:57,621 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 23:48:38] 2025-12-15 04:47:57,621 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 23:48:38] 2025-12-15 04:47:57,621 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 23:48:38] 2025-12-15 04:47:57,621 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 23:48:38] 2025-12-15 04:47:57,622 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 23:48:38] 2025-12-15 04:47:57,622 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 23:48:38] 2025-12-15 04:47:57,622 | INFO     | job 6930660105 has completed (purged errors)
[2025-12-14 23:48:38] 2025-12-15 04:47:57,622 | INFO     | overall cleanup function is called
[2025-12-14 23:48:38] 2025-12-15 04:47:58,021 | INFO     | PID=4116829 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-14 23:48:38] 2025-12-15 04:47:58,037 | INFO     | .. there are 12 such processes running
[2025-12-14 23:48:38] 2025-12-15 04:47:58,651 | INFO     | --- collectZombieJob: --- 10, [4134726]
[2025-12-14 23:48:38] 2025-12-15 04:47:58,651 | INFO     | zombie collector waiting for pid 4134726
[2025-12-14 23:48:38] 2025-12-15 04:47:58,651 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 23:48:38] 2025-12-15 04:47:58,651 | INFO     | collected zombie processes
[2025-12-14 23:48:38] 2025-12-15 04:47:58,651 | INFO     | will attempt to kill all subprocesses of pid=4134726
[2025-12-14 23:48:38] 2025-12-15 04:47:59,138 | INFO     | process IDs to be killed: [4134726] (in reverse order)
[2025-12-14 23:48:38] 2025-12-15 04:47:59,260 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 23:48:38] 2025-12-15 04:47:59,261 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 23:48:38] 2025-12-15 04:47:59,308 | INFO     | did not find any defunct processes belonging to 4134726
[2025-12-14 23:48:38] 2025-12-15 04:47:59,345 | INFO     | did not find any defunct processes belonging to 4134726
[2025-12-14 23:48:38] 2025-12-15 04:47:59,345 | INFO     | ready for new job
[2025-12-14 23:48:38] 2025-12-15 04:47:59,346 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 23:48:38] 2025-12-15 04:47:59,348 | INFO     | ***************************************
[2025-12-14 23:48:38] 2025-12-15 04:47:59,348 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 23:48:38] 2025-12-15 04:47:59,348 | INFO     | ***************************************
[2025-12-14 23:48:38] 2025-12-15 04:47:59,348 | INFO     | 
[2025-12-14 23:48:38] 2025-12-15 04:47:59,354 | INFO     | architecture information:
[2025-12-14 23:48:38] 2025-12-15 04:47:59,359 | INFO     | executing command: cat /etc/os-release
[2025-12-14 23:48:38] 2025-12-15 04:47:59,414 | INFO     | cat /etc/os-release:
[2025-12-14 23:48:38] NAME="CentOS Linux"
[2025-12-14 23:48:38] VERSION="7 (Core)"
[2025-12-14 23:48:38] ID="centos"
[2025-12-14 23:48:38] ID_LIKE="rhel fedora"
[2025-12-14 23:48:38] VERSION_ID="7"
[2025-12-14 23:48:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 23:48:38] ANSI_COLOR="0;31"
[2025-12-14 23:48:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 23:48:38] HOME_URL="https://www.centos.org/"
[2025-12-14 23:48:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 23:48:38] 
[2025-12-14 23:48:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 23:48:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 23:48:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 23:48:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 23:48:38] 
[2025-12-14 23:48:38] 2025-12-15 04:47:59,414 | INFO     | ***************************************
[2025-12-14 23:48:38] 2025-12-15 04:47:59,918 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-14 23:48:38] 2025-12-15 04:48:00,025 | INFO     | sufficient remaining disk space (76379324416 B)
[2025-12-14 23:48:38] 2025-12-15 04:48:00,026 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 23:48:38] 2025-12-15 04:48:00,026 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 23:48:38] 2025-12-15 04:48:00,026 | INFO     | update_server=False
[2025-12-14 23:48:38] 2025-12-15 04:48:00,026 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 23:48:38] 2025-12-15 04:48:00,027 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 23:48:38] 2025-12-15 04:48:00,027 | INFO     | aborting loop
[2025-12-14 23:48:38] 2025-12-15 04:48:00,101 | INFO     | all job control threads have been joined
[2025-12-14 23:48:38] 2025-12-15 04:48:00,730 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 23:48:38] 2025-12-15 04:48:00,802 | INFO     | all data control threads have been joined
[2025-12-14 23:48:38] 2025-12-15 04:48:00,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 23:48:38] 2025-12-15 04:48:01,012 | INFO     | all payload control threads have been joined
[2025-12-14 23:48:38] 2025-12-15 04:48:01,031 | INFO     | [job] retrieve thread has finished
[2025-12-14 23:48:38] 2025-12-15 04:48:01,032 | INFO     | [job] job monitor thread has finished
[2025-12-14 23:48:38] 2025-12-15 04:48:01,107 | INFO     | [job] control thread has finished
[2025-12-14 23:48:38] 2025-12-15 04:48:01,219 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 23:48:38] 2025-12-15 04:48:01,405 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 23:48:38] 2025-12-15 04:48:01,448 | INFO     | [payload] failed_post thread has finished
[2025-12-14 23:48:38] 2025-12-15 04:48:01,646 | INFO     | [data] copytool_in thread has finished
[2025-12-14 23:48:38] 2025-12-15 04:48:01,808 | INFO     | [data] control thread has finished
[2025-12-14 23:48:38] 2025-12-15 04:48:02,018 | INFO     | [payload] control thread has finished
[2025-12-14 23:48:38] 2025-12-15 04:48:02,033 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 23:48:38] 2025-12-15 04:48:02,094 | INFO     | [job] validate thread has finished
[2025-12-14 23:48:38] 2025-12-15 04:48:02,202 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 23:48:38] 2025-12-15 04:48:02,226 | INFO     | [payload] validate_post thread has finished
[2025-12-14 23:48:38] 2025-12-15 04:48:02,360 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 23:48:38] 2025-12-15 04:48:02,921 | INFO     | [data] copytool_out thread has finished
[2025-12-14 23:48:38] 2025-12-15 04:48:03,366 | INFO     | [job] queue monitor thread has finished
[2025-12-14 23:48:38] 2025-12-15 04:48:04,741 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 23:48:38] 2025-12-15 04:48:30,739 | INFO     | PID=4116829 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 23:48:38] 2025-12-15 04:48:30,739 | INFO     | .. there are 12 such processes running
[2025-12-14 23:48:38] 2025-12-15 04:48:30,740 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 23:48:38] 2025-12-15 04:48:30,740 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 23:48:38] 2025-12-15 04:48:30,740 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 23:48:38] 2025-12-15 04:48:30,914 | INFO     | [monitor] cgroup control has ended
[2025-12-14 23:48:38] 2025-12-15 04:48:32,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139944086161216)>', '<ExcThread(monitor, started 139943431096064)>']
[2025-12-14 23:48:38] 2025-12-15 04:48:32,752 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 23:48:38] 2025-12-15 04:48:32,752 | INFO     | [monitor] control thread has ended
[2025-12-14 23:48:38] 2025-12-15 04:48:37,398 | INFO     | all workflow threads have been joined
[2025-12-14 23:48:38] 2025-12-15 04:48:37,398 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 23:48:38] 2025-12-15 04:48:37,398 | INFO     | traces error code: 0
[2025-12-14 23:48:38] 2025-12-15 04:48:37,399 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 23:48:38] 2025-12-15 04:48:37,686 [wrapper] ==== pilot stdout END ====
[2025-12-14 23:48:38] 2025-12-15 04:48:37,719 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 23:48:38] 2025-12-15 04:48:37,735 [wrapper] pilotpid: 4116829
[2025-12-14 23:48:38] 2025-12-15 04:48:37,739 [wrapper] Pilot exit status: 0
[2025-12-14 23:48:38] 2025-12-15 04:48:37,830 [wrapper] pandaids: 6930660105
[2025-12-14 23:48:38] 2025-12-15 04:48:37,943 [wrapper] cleanup supervisor_pilot  732014 4116830
[2025-12-14 23:48:38] 2025-12-15 04:48:37,948 [wrapper] Test setup, not cleaning
[2025-12-14 23:48:38] 2025-12-15 04:48:37,951 [wrapper] apfmon messages muted
[2025-12-14 23:48:38] 2025-12-15 04:48:37,954 [wrapper] ==== wrapper stdout END ====
[2025-12-14 23:48:38] 2025-12-15 04:48:37,958 [wrapper] ==== wrapper stderr END ====
[2025-12-14 23:48:38]  *** Error codes and diagnostics ***
[2025-12-14 23:48:38]     "exeErrorCode": 0,
[2025-12-14 23:48:38]     "exeErrorDiag": "",
[2025-12-14 23:48:38]     "pilotErrorCode": 0,
[2025-12-14 23:48:38]     "pilotErrorDiag": "",
[2025-12-14 23:48:38]  *** Listing of results directory ***
[2025-12-14 23:48:38] total 379968
[2025-12-14 23:48:38] -rw-r--r--. 1 boincer umatlas    579449 Dec 14 10:56 pilot3.tar.gz
[2025-12-14 23:48:38] -rw-r--r--. 1 boincer umatlas      5112 Dec 14 10:58 queuedata.json
[2025-12-14 23:48:38] -rwx------. 1 boincer umatlas     36322 Dec 14 10:59 runpilot2-wrapper.sh
[2025-12-14 23:48:38] -rw-r--r--. 1 boincer umatlas       100 Dec 14 18:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 23:48:38] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 14 18:53 run_atlas
[2025-12-14 23:48:38] -rw-r--r--. 1 boincer umatlas       105 Dec 14 18:53 job.xml
[2025-12-14 23:48:38] -rw-r--r--. 2 boincer umatlas 199281263 Dec 14 18:53 EVNT.47898875._000060.pool.root.1
[2025-12-14 23:48:38] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 18:53 start_atlas.sh
[2025-12-14 23:48:38] drwxrwx--x. 2 boincer umatlas      4096 Dec 14 18:53 shared
[2025-12-14 23:48:38] -rw-r--r--. 2 boincer umatlas    592389 Dec 14 18:53 input.tar.gz
[2025-12-14 23:48:38] -rw-r--r--. 1 boincer umatlas         0 Dec 14 18:53 boinc_lockfile
[2025-12-14 23:48:38] -rw-r--r--. 1 boincer umatlas      2500 Dec 14 18:53 pandaJob.out
[2025-12-14 23:48:38] -rw-------. 1 boincer umatlas        57 Dec 14 18:53 setup.sh.local
[2025-12-14 23:48:38] -rw-------. 1 boincer umatlas    991024 Dec 14 18:54 agis_schedconf.cvmfs.json
[2025-12-14 23:48:38] drwx------. 5 boincer umatlas      4096 Dec 14 18:54 pilot3
[2025-12-14 23:48:38] -rw-r--r--. 1 boincer umatlas      6660 Dec 14 23:46 init_data.xml
[2025-12-14 23:48:38] -rw-------. 1 boincer umatlas 180787558 Dec 14 23:47 HITS.47898878._001506.pool.root.1
[2025-12-14 23:48:38] -rw-r--r--. 1 boincer umatlas       531 Dec 14 23:47 boinc_task_state.xml
[2025-12-14 23:48:38] -rw-------. 1 boincer umatlas      1043 Dec 14 23:47 memory_monitor_summary.json
[2025-12-14 23:48:38] -rw-------. 1 boincer umatlas   1516240 Dec 14 23:47 agis_ddmendpoints.agis.ALL.json
[2025-12-14 23:48:38] -rw-------. 1 boincer umatlas    469952 Dec 14 23:47 log.47898878._001506.job.log.tgz.1
[2025-12-14 23:48:38] -rw-------. 1 boincer umatlas      7815 Dec 14 23:47 heartbeat.json
[2025-12-14 23:48:38] -rw-r--r--. 1 boincer umatlas      8192 Dec 14 23:48 boinc_mmap_file
[2025-12-14 23:48:38] -rw-r--r--. 1 boincer umatlas        28 Dec 14 23:48 wrapper_checkpoint.txt
[2025-12-14 23:48:38] -rw-------. 1 boincer umatlas        95 Dec 14 23:48 pilot_heartbeat.json
[2025-12-14 23:48:38] -rw-------. 1 boincer umatlas      4824 Dec 14 23:48 pilotlog.txt
[2025-12-14 23:48:38] -rw-------. 1 boincer umatlas   2081839 Dec 14 23:48 log.47898878._001506.job.log.1
[2025-12-14 23:48:38] -rw-------. 1 boincer umatlas       357 Dec 14 23:48 output.list
[2025-12-14 23:48:38] -rw-r--r--. 1 boincer umatlas       620 Dec 14 23:48 runtime_log
[2025-12-14 23:48:38] -rw-------. 1 boincer umatlas   2570240 Dec 14 23:48 result.tar.gz
[2025-12-14 23:48:38] -rw-------. 1 boincer umatlas       653 Dec 14 23:48 TGKLDmQg3o8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyxVKDmKxxXKm.diag
[2025-12-14 23:48:38] -rw-r--r--. 1 boincer umatlas      9333 Dec 14 23:48 runtime_log.err
[2025-12-14 23:48:38] -rw-r--r--. 1 boincer umatlas     21308 Dec 14 23:48 stderr.txt
[2025-12-14 23:48:38] HITS file was successfully produced:
[2025-12-14 23:48:38] -rw-------. 1 boincer umatlas 180787558 Dec 14 23:47 shared/HITS.pool.root.1
[2025-12-14 23:48:38]  *** Contents of shared directory: ***
[2025-12-14 23:48:38] total 374276
[2025-12-14 23:48:38] -rw-r--r--. 2 boincer umatlas 199281263 Dec 14 18:53 ATLAS.root_0
[2025-12-14 23:48:38] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 18:53 start_atlas.sh
[2025-12-14 23:48:38] -rw-r--r--. 2 boincer umatlas    592389 Dec 14 18:53 input.tar.gz
[2025-12-14 23:48:38] -rw-------. 1 boincer umatlas 180787558 Dec 14 23:47 HITS.pool.root.1
[2025-12-14 23:48:38] -rw-------. 1 boincer umatlas   2570240 Dec 14 23:48 result.tar.gz
23:48:40 (4109086): run_atlas exited; CPU time 46617.028733
23:48:40 (4109086): called boinc_finish(0)

</stderr_txt>
]]>

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