Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:03:12 (569855): wrapper (7.7.26015): starting
17:03:12 (569855): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 17:03:12] Arguments: --nthreads 8
[2025-12-14 17:03:12] Threads: 8
[2025-12-14 17:03:12] Checking for CVMFS
[2025-12-14 17:03:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 17:03:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 17:03:14] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 17:03:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 17:03:16] 2.13.2.0 9432 60336 235472 154008 1 150 36588245 39288832 8804 16776704 0 47488256 99.667 44330147 38733 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 17:03:16] CVMFS is ok
[2025-12-14 17:03:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 17:03:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 17:03:16] Further information can be found at the LHC@home message board.
[2025-12-14 17:03:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 17:03:16] Checking for apptainer binary...
[2025-12-14 17:03:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 17:03:16] Running /usr/bin/apptainer --version
[2025-12-14 17:03:17] apptainer version 1.4.4-1.el9
[2025-12-14 17:03:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 17:03:18] c-211-5.aglt2.org
[2025-12-14 17:03:18] apptainer works
[2025-12-14 17:03:18] Set ATHENA_PROC_NUMBER=8
[2025-12-14 17:03:18] Set ATHENA_CORE_NUMBER=8
[2025-12-14 17:03:18] Starting ATLAS job with PandaID=6929464909
[2025-12-14 17:03:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 05:40:06]  *** The last 200 lines of the pilot log: ***
[2025-12-15 05:40:06] 2025-12-15 10:39:14,242 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 05:40:06] 2025-12-15 10:39:14,243 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 05:40:06] 2025-12-15 10:39:14,243 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 05:40:06] 2025-12-15 10:39:14,257 | INFO     | fitting pss+swap vs Time
[2025-12-15 05:40:06] 2025-12-15 10:39:14,259 | INFO     | sum of square deviations: 125143795777.83524
[2025-12-15 05:40:06] 2025-12-15 10:39:14,274 | INFO     | sum of deviations: 814803315562.7006
[2025-12-15 05:40:06] 2025-12-15 10:39:14,275 | INFO     | mean x: 1765772559.0541272
[2025-12-15 05:40:06] 2025-12-15 10:39:14,275 | INFO     | mean y: 2475559.0324763195
[2025-12-15 05:40:06] 2025-12-15 10:39:14,275 | INFO     | intersect: -11494357557.657772
[2025-12-15 05:40:06] 2025-12-15 10:39:14,276 | INFO     | chi2: 6.289023493719533
[2025-12-15 05:40:06] 2025-12-15 10:39:14,277 | INFO     | sum of square deviations: 122621037224.74043
[2025-12-15 05:40:06] 2025-12-15 10:39:14,298 | INFO     | sum of deviations: 855527750952.6575
[2025-12-15 05:40:06] 2025-12-15 10:39:14,298 | INFO     | mean x: 1765772406.561308
[2025-12-15 05:40:06] 2025-12-15 10:39:14,351 | INFO     | mean y: 2478005.1076294277
[2025-12-15 05:40:06] 2025-12-15 10:39:14,351 | INFO     | intersect: -12317327224.64996
[2025-12-15 05:40:06] 2025-12-15 10:39:14,352 | INFO     | chi2: 5.595021117265012
[2025-12-15 05:40:06] 2025-12-15 10:39:14,352 | INFO     | current chi2=5.595021117265012 (change=11.035137285583037 %)
[2025-12-15 05:40:06] 2025-12-15 10:39:14,353 | INFO     | right removable region: 733
[2025-12-15 05:40:06] 2025-12-15 10:39:14,354 | INFO     | sum of square deviations: 122620606992.86234
[2025-12-15 05:40:06] 2025-12-15 10:39:14,525 | INFO     | sum of deviations: 601972690916.5399
[2025-12-15 05:40:06] 2025-12-15 10:39:14,526 | INFO     | mean x: 1765772711.5599456
[2025-12-15 05:40:06] 2025-12-15 10:39:14,526 | INFO     | mean y: 2488415.48773842
[2025-12-15 05:40:06] 2025-12-15 10:39:14,526 | INFO     | intersect: -8666094922.927877
[2025-12-15 05:40:06] 2025-12-15 10:39:14,527 | INFO     | chi2: 3.271429491824078
[2025-12-15 05:40:06] 2025-12-15 10:39:14,527 | INFO     | current chi2=3.271429491824078 (change=47.981916507530045 %)
[2025-12-15 05:40:06] 2025-12-15 10:39:14,533 | INFO     | sum of square deviations: 120131737359.34404
[2025-12-15 05:40:06] 2025-12-15 10:39:14,550 | INFO     | sum of deviations: 462383221019.35394
[2025-12-15 05:40:06] 2025-12-15 10:39:14,550 | INFO     | mean x: 1765772864.0603566
[2025-12-15 05:40:06] 2025-12-15 10:39:14,550 | INFO     | mean y: 2496963.946502058
[2025-12-15 05:40:06] 2025-12-15 10:39:14,550 | INFO     | intersect: -6793906404.719935
[2025-12-15 05:40:06] 2025-12-15 10:39:14,551 | INFO     | chi2: 2.055106529471027
[2025-12-15 05:40:06] 2025-12-15 10:39:14,551 | INFO     | current chi2=2.055106529471027 (change=37.180167428118885 %)
[2025-12-15 05:40:06] 2025-12-15 10:39:14,553 | INFO     | sum of square deviations: 117676553233.68365
[2025-12-15 05:40:06] 2025-12-15 10:39:14,566 | INFO     | sum of deviations: 363556627645.1593
[2025-12-15 05:40:06] 2025-12-15 10:39:14,566 | INFO     | mean x: 1765773016.5676796
[2025-12-15 05:40:06] 2025-12-15 10:39:14,566 | INFO     | mean y: 2503097.374309392
[2025-12-15 05:40:06] 2025-12-15 10:39:14,566 | INFO     | intersect: -5452776356.769423
[2025-12-15 05:40:06] 2025-12-15 10:39:14,568 | INFO     | chi2: 1.4350286507004009
[2025-12-15 05:40:06] 2025-12-15 10:39:14,568 | INFO     | current chi2=1.4350286507004009 (change=30.172541903714873 %)
[2025-12-15 05:40:06] 2025-12-15 10:39:14,569 | INFO     | sum of square deviations: 115255132732.23927
[2025-12-15 05:40:06] 2025-12-15 10:39:14,582 | INFO     | sum of deviations: 297600968152.477
[2025-12-15 05:40:06] 2025-12-15 10:39:14,582 | INFO     | mean x: 1765773169.0723226
[2025-12-15 05:40:06] 2025-12-15 10:39:14,582 | INFO     | mean y: 2507249.702364395
[2025-12-15 05:40:06] 2025-12-15 10:39:14,582 | INFO     | intersect: -4556906220.189884
[2025-12-15 05:40:06] 2025-12-15 10:39:14,583 | INFO     | chi2: 1.1888616526505058
[2025-12-15 05:40:06] 2025-12-15 10:39:14,584 | INFO     | current chi2=1.1888616526505058 (change=17.15415214391345 %)
[2025-12-15 05:40:06] 2025-12-15 10:39:14,584 | INFO     | left removable region: 40
[2025-12-15 05:40:06] 2025-12-15 10:39:14,585 | INFO     | sum of square deviations: 103198219311.714
[2025-12-15 05:40:06] 2025-12-15 10:39:14,596 | INFO     | sum of deviations: 210565457889.61877
[2025-12-15 05:40:06] 2025-12-15 10:39:14,597 | INFO     | mean x: 1765773596.0952382
[2025-12-15 05:40:06] 2025-12-15 10:39:14,597 | INFO     | mean y: 2518493.0057720058
[2025-12-15 05:40:06] 2025-12-15 10:39:14,597 | INFO     | intersect: -3600362722.1063223
[2025-12-15 05:40:06] 2025-12-15 10:39:14,598 | INFO     | chi2: 0.2432452937010086
[2025-12-15 05:40:06] 2025-12-15 10:39:14,598 | INFO     | current memory leak: 2.04 B/s (using 693 data points, chi2=0.24)
[2025-12-15 05:40:06] 2025-12-15 10:39:14,600 | INFO     | could have reported an average CPU frequency of 2600 MHz (28 samples)
[2025-12-15 05:40:06] 2025-12-15 10:39:14,600 | INFO     | ..............................
[2025-12-15 05:40:06] 2025-12-15 10:39:14,600 | INFO     | . Timing measurements:
[2025-12-15 05:40:06] 2025-12-15 10:39:14,600 | INFO     | . get job = 0 s
[2025-12-15 05:40:06] 2025-12-15 10:39:14,600 | INFO     | . initial setup = 5 s
[2025-12-15 05:40:06] 2025-12-15 10:39:14,600 | INFO     | . payload setup = 50 s
[2025-12-15 05:40:06] 2025-12-15 10:39:14,600 | INFO     | . stage-in = 0 s
[2025-12-15 05:40:06] 2025-12-15 10:39:14,601 | INFO     | . payload execution = 45105 s
[2025-12-15 05:40:06] 2025-12-15 10:39:14,601 | INFO     | . stage-out = 3 s
[2025-12-15 05:40:06] 2025-12-15 10:39:14,601 | INFO     | . log creation = 0 s
[2025-12-15 05:40:06] 2025-12-15 10:39:14,601 | INFO     | ..............................
[2025-12-15 05:40:06] 2025-12-15 10:39:14,725 | INFO     | 
[2025-12-15 05:40:06] 2025-12-15 10:39:14,725 | INFO     | job summary report
[2025-12-15 05:40:06] 2025-12-15 10:39:14,725 | INFO     | --------------------------------------------------
[2025-12-15 05:40:06] 2025-12-15 10:39:14,725 | INFO     | PanDA job id: 6929464909
[2025-12-15 05:40:06] 2025-12-15 10:39:14,725 | INFO     | task id: 47898763
[2025-12-15 05:40:06] 2025-12-15 10:39:14,725 | INFO     | errors: (none)
[2025-12-15 05:40:06] 2025-12-15 10:39:14,725 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 05:40:06] 2025-12-15 10:39:14,726 | INFO     | pilot state: finished 
[2025-12-15 05:40:06] 2025-12-15 10:39:14,726 | INFO     | transexitcode: 0
[2025-12-15 05:40:06] 2025-12-15 10:39:14,726 | INFO     | exeerrorcode: 0
[2025-12-15 05:40:06] 2025-12-15 10:39:14,726 | INFO     | exeerrordiag: 
[2025-12-15 05:40:06] 2025-12-15 10:39:14,726 | INFO     | exitcode: 0
[2025-12-15 05:40:06] 2025-12-15 10:39:14,726 | INFO     | exitmsg: OK
[2025-12-15 05:40:06] 2025-12-15 10:39:14,726 | INFO     | cpuconsumptiontime: 72020 s
[2025-12-15 05:40:06] 2025-12-15 10:39:14,726 | INFO     | nevents: 400
[2025-12-15 05:40:06] 2025-12-15 10:39:14,726 | INFO     | neventsw: 0
[2025-12-15 05:40:06] 2025-12-15 10:39:14,726 | INFO     | pid: 582198
[2025-12-15 05:40:06] 2025-12-15 10:39:14,726 | INFO     | pgrp: 582198
[2025-12-15 05:40:06] 2025-12-15 10:39:14,727 | INFO     | corecount: 8
[2025-12-15 05:40:06] 2025-12-15 10:39:14,727 | INFO     | event service: False
[2025-12-15 05:40:06] 2025-12-15 10:39:14,727 | INFO     | sizes: {0: 2283126, 1: 2283811, 2: 2284010, 3: 2284038, 14: 2284038, 25: 2284066, 36: 2284222, 38: 2284512, 47: 2284540, 45160: 2329491, 45163: 2338489, 45165: 233
[2025-12-15 05:40:06] 2025-12-15 10:39:14,727 | INFO     | --------------------------------------------------
[2025-12-15 05:40:06] 2025-12-15 10:39:14,727 | INFO     | 
[2025-12-15 05:40:06] 2025-12-15 10:39:14,727 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-15 05:40:06] 2025-12-15 10:39:14,751 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 05:40:06] 2025-12-15 10:39:14,752 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 05:40:06] 2025-12-15 10:39:14,752 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 05:40:06] 2025-12-15 10:39:14,752 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 05:40:06] 2025-12-15 10:39:14,752 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 05:40:06] 2025-12-15 10:39:14,752 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 05:40:06] 2025-12-15 10:39:14,752 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 05:40:06] 2025-12-15 10:39:14,753 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 05:40:06] 2025-12-15 10:39:14,753 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 05:40:06] 2025-12-15 10:39:14,753 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 05:40:06] 2025-12-15 10:39:14,753 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 05:40:06] 2025-12-15 10:39:14,753 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 05:40:06] 2025-12-15 10:39:14,753 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 05:40:06] 2025-12-15 10:39:14,753 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 05:40:06] 2025-12-15 10:39:14,753 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 05:40:06] 2025-12-15 10:39:14,753 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 05:40:06] 2025-12-15 10:39:14,753 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 05:40:06] 2025-12-15 10:39:14,754 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 05:40:06] 2025-12-15 10:39:14,754 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 05:40:06] 2025-12-15 10:39:14,754 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 05:40:06] 2025-12-15 10:39:14,754 | INFO     | job 6929464909 has completed (purged errors)
[2025-12-15 05:40:06] 2025-12-15 10:39:14,754 | INFO     | overall cleanup function is called
[2025-12-15 05:40:06] 2025-12-15 10:39:15,765 | INFO     | --- collectZombieJob: --- 10, [582198]
[2025-12-15 05:40:06] 2025-12-15 10:39:15,766 | INFO     | zombie collector waiting for pid 582198
[2025-12-15 05:40:06] 2025-12-15 10:39:15,766 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 05:40:06] 2025-12-15 10:39:15,766 | INFO     | collected zombie processes
[2025-12-15 05:40:06] 2025-12-15 10:39:15,766 | INFO     | will attempt to kill all subprocesses of pid=582198
[2025-12-15 05:40:06] 2025-12-15 10:39:16,217 | INFO     | process IDs to be killed: [582198] (in reverse order)
[2025-12-15 05:40:06] 2025-12-15 10:39:16,310 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 05:40:06] 2025-12-15 10:39:16,310 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 05:40:06] 2025-12-15 10:39:16,326 | INFO     | did not find any defunct processes belonging to 582198
[2025-12-15 05:40:06] 2025-12-15 10:39:16,341 | INFO     | did not find any defunct processes belonging to 582198
[2025-12-15 05:40:06] 2025-12-15 10:39:16,341 | INFO     | ready for new job
[2025-12-15 05:40:06] 2025-12-15 10:39:16,341 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 05:40:06] 2025-12-15 10:39:16,347 | INFO     | ***************************************
[2025-12-15 05:40:06] 2025-12-15 10:39:16,347 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 05:40:06] 2025-12-15 10:39:16,347 | INFO     | ***************************************
[2025-12-15 05:40:06] 2025-12-15 10:39:16,347 | INFO     | 
[2025-12-15 05:40:06] 2025-12-15 10:39:16,350 | INFO     | architecture information:
[2025-12-15 05:40:06] 2025-12-15 10:39:16,351 | INFO     | executing command: cat /etc/os-release
[2025-12-15 05:40:06] 2025-12-15 10:39:16,452 | INFO     | cat /etc/os-release:
[2025-12-15 05:40:06] NAME="CentOS Linux"
[2025-12-15 05:40:06] VERSION="7 (Core)"
[2025-12-15 05:40:06] ID="centos"
[2025-12-15 05:40:06] ID_LIKE="rhel fedora"
[2025-12-15 05:40:06] VERSION_ID="7"
[2025-12-15 05:40:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 05:40:06] ANSI_COLOR="0;31"
[2025-12-15 05:40:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 05:40:06] HOME_URL="https://www.centos.org/"
[2025-12-15 05:40:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 05:40:06] 
[2025-12-15 05:40:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 05:40:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 05:40:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 05:40:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 05:40:06] 
[2025-12-15 05:40:06] 2025-12-15 10:39:16,456 | INFO     | ***************************************
[2025-12-15 05:40:06] 2025-12-15 10:39:16,960 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-15 05:40:06] 2025-12-15 10:39:17,156 | INFO     | sufficient remaining disk space (53042216960 B)
[2025-12-15 05:40:06] 2025-12-15 10:39:17,156 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 05:40:06] 2025-12-15 10:39:17,157 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 05:40:06] 2025-12-15 10:39:17,157 | INFO     | update_server=False
[2025-12-15 05:40:06] 2025-12-15 10:39:17,157 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 05:40:06] 2025-12-15 10:39:17,176 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 05:40:06] 2025-12-15 10:39:17,278 | INFO     | all job control threads have been joined
[2025-12-15 05:40:06] 2025-12-15 10:39:17,413 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 05:40:06] 2025-12-15 10:39:17,414 | INFO     | aborting loop
[2025-12-15 05:40:06] 2025-12-15 10:39:17,449 | INFO     | all data control threads have been joined
[2025-12-15 05:40:06] 2025-12-15 10:39:17,450 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 05:40:06] 2025-12-15 10:39:18,167 | INFO     | [job] retrieve thread has finished
[2025-12-15 05:40:06] 2025-12-15 10:39:18,236 | INFO     | all payload control threads have been joined
[2025-12-15 05:40:06] 2025-12-15 10:39:18,286 | INFO     | [job] control thread has finished
[2025-12-15 05:40:06] 2025-12-15 10:39:18,419 | INFO     | [job] job monitor thread has finished
[2025-12-15 05:40:06] 2025-12-15 10:39:18,454 | INFO     | [data] control thread has finished
[2025-12-15 05:40:06] 2025-12-15 10:39:18,888 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 05:40:06] 2025-12-15 10:39:18,909 | INFO     | [data] copytool_in thread has finished
[2025-12-15 05:40:06] 2025-12-15 10:39:19,148 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 05:40:06] 2025-12-15 10:39:19,242 | INFO     | [payload] control thread has finished
[2025-12-15 05:40:06] 2025-12-15 10:39:19,456 | INFO     | [data] copytool_out thread has finished
[2025-12-15 05:40:06] 2025-12-15 10:39:19,638 | INFO     | [payload] validate_post thread has finished
[2025-12-15 05:40:06] 2025-12-15 10:39:19,638 | INFO     | [payload] failed_post thread has finished
[2025-12-15 05:40:06] 2025-12-15 10:39:19,654 | INFO     | [job] validate thread has finished
[2025-12-15 05:40:06] 2025-12-15 10:39:19,659 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 05:40:06] 2025-12-15 10:39:19,660 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 05:40:06] 2025-12-15 10:39:19,743 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 05:40:06] 2025-12-15 10:39:20,749 | INFO     | [job] queue monitor thread has finished
[2025-12-15 05:40:06] 2025-12-15 10:39:21,189 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 05:40:06] 2025-12-15 10:39:46,847 | INFO     | PID=574078 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-15 05:40:06] 2025-12-15 10:39:46,847 | INFO     | .. there are 7 such processes running
[2025-12-15 05:40:06] 2025-12-15 10:39:46,847 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 05:40:06] 2025-12-15 10:39:46,847 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 05:40:06] 2025-12-15 10:39:46,847 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 05:40:06] 2025-12-15 10:39:58,909 | INFO     | [monitor] cgroup control has ended
[2025-12-15 05:40:06] 2025-12-15 10:40:00,263 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139749133408064)>', '<ExcThread(monitor, started 139748337235712)>']
[2025-12-15 05:40:06] 2025-12-15 10:40:00,923 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 05:40:06] 2025-12-15 10:40:00,924 | INFO     | [monitor] control thread has ended
[2025-12-15 05:40:06] 2025-12-15 10:40:05,293 | INFO     | all workflow threads have been joined
[2025-12-15 05:40:06] 2025-12-15 10:40:05,294 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 05:40:06] 2025-12-15 10:40:05,295 | INFO     | traces error code: 0
[2025-12-15 05:40:06] 2025-12-15 10:40:05,295 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 05:40:06] 2025-12-15 10:40:05,835 [wrapper] ==== pilot stdout END ====
[2025-12-15 05:40:06] 2025-12-15 10:40:05,838 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 05:40:06] 2025-12-15 10:40:05,842 [wrapper] pilotpid: 574078
[2025-12-15 05:40:06] 2025-12-15 10:40:05,851 [wrapper] Pilot exit status: 0
[2025-12-15 05:40:06] 2025-12-15 10:40:05,865 [wrapper] pandaids: 6929464909
[2025-12-15 05:40:06] 2025-12-15 10:40:05,914 [wrapper] cleanup supervisor_pilot 1565036 574079
[2025-12-15 05:40:06] 2025-12-15 10:40:05,919 [wrapper] Test setup, not cleaning
[2025-12-15 05:40:06] 2025-12-15 10:40:05,922 [wrapper] apfmon messages muted
[2025-12-15 05:40:06] 2025-12-15 10:40:05,925 [wrapper] ==== wrapper stdout END ====
[2025-12-15 05:40:06] 2025-12-15 10:40:05,928 [wrapper] ==== wrapper stderr END ====
[2025-12-15 05:40:06]  *** Error codes and diagnostics ***
[2025-12-15 05:40:06]     "exeErrorCode": 0,
[2025-12-15 05:40:06]     "exeErrorDiag": "",
[2025-12-15 05:40:06]     "pilotErrorCode": 0,
[2025-12-15 05:40:06]     "pilotErrorDiag": "",
[2025-12-15 05:40:06]  *** Listing of results directory ***
[2025-12-15 05:40:06] total 455228
[2025-12-15 05:40:06] -rw-r--r--. 1 boincer umatlas    579449 Dec 14 10:56 pilot3.tar.gz
[2025-12-15 05:40:06] -rw-r--r--. 1 boincer umatlas      5112 Dec 14 10:56 queuedata.json
[2025-12-15 05:40:06] -rwx------. 1 boincer umatlas     36322 Dec 14 10:56 runpilot2-wrapper.sh
[2025-12-15 05:40:06] -rw-r--r--. 1 boincer umatlas       100 Dec 14 17:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 05:40:06] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 14 17:03 run_atlas
[2025-12-15 05:40:06] -rw-r--r--. 1 boincer umatlas       105 Dec 14 17:03 job.xml
[2025-12-15 05:40:06] -rw-r--r--. 2 boincer umatlas 221947440 Dec 14 17:03 EVNT.47898761._000504.pool.root.1
[2025-12-15 05:40:06] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 17:03 start_atlas.sh
[2025-12-15 05:40:06] drwxrwx--x. 2 boincer umatlas      4096 Dec 14 17:03 shared
[2025-12-15 05:40:06] -rw-r--r--. 2 boincer umatlas    592396 Dec 14 17:03 input.tar.gz
[2025-12-15 05:40:06] -rw-r--r--. 1 boincer umatlas         0 Dec 14 17:03 boinc_lockfile
[2025-12-15 05:40:06] -rw-r--r--. 1 boincer umatlas      2505 Dec 14 17:03 pandaJob.out
[2025-12-15 05:40:06] -rw-------. 1 boincer umatlas        57 Dec 14 17:03 setup.sh.local
[2025-12-15 05:40:06] -rw-------. 1 boincer umatlas    991024 Dec 14 17:04 agis_schedconf.cvmfs.json
[2025-12-15 05:40:06] drwx------. 5 boincer umatlas      4096 Dec 14 17:04 pilot3
[2025-12-15 05:40:06] -rw-r--r--. 1 boincer umatlas      6658 Dec 15 05:36 init_data.xml
[2025-12-15 05:40:06] -rw-------. 1 boincer umatlas 227177911 Dec 15 05:37 HITS.47898763._011329.pool.root.1
[2025-12-15 05:40:06] -rw-r--r--. 1 boincer umatlas       531 Dec 15 05:37 boinc_task_state.xml
[2025-12-15 05:40:06] -rw-------. 1 boincer umatlas      1053 Dec 15 05:38 memory_monitor_summary.json
[2025-12-15 05:40:06] -rw-------. 1 boincer umatlas   1516240 Dec 15 05:38 agis_ddmendpoints.agis.ALL.json
[2025-12-15 05:40:06] -rw-------. 1 boincer umatlas    843466 Dec 15 05:38 log.47898763._011329.job.log.tgz.1
[2025-12-15 05:40:06] -rw-------. 1 boincer umatlas        95 Dec 15 05:39 pilot_heartbeat.json
[2025-12-15 05:40:06] -rw-------. 1 boincer umatlas      7817 Dec 15 05:39 heartbeat.json
[2025-12-15 05:40:06] -rw-r--r--. 1 boincer umatlas      8192 Dec 15 05:40 boinc_mmap_file
[2025-12-15 05:40:06] -rw-r--r--. 1 boincer umatlas        28 Dec 15 05:40 wrapper_checkpoint.txt
[2025-12-15 05:40:06] -rw-------. 1 boincer umatlas      4822 Dec 15 05:40 pilotlog.txt
[2025-12-15 05:40:06] -rw-------. 1 boincer umatlas   5716010 Dec 15 05:40 log.47898763._011329.job.log.1
[2025-12-15 05:40:06] -rw-------. 1 boincer umatlas       357 Dec 15 05:40 output.list
[2025-12-15 05:40:06] -rw-r--r--. 1 boincer umatlas       620 Dec 15 05:40 runtime_log
[2025-12-15 05:40:06] -rw-------. 1 boincer umatlas   6574080 Dec 15 05:40 result.tar.gz
[2025-12-15 05:40:06] -rw-r--r--. 1 boincer umatlas      9338 Dec 15 05:40 runtime_log.err
[2025-12-15 05:40:06] -rw-------. 1 boincer umatlas       657 Dec 15 05:40 1W3MDmUd3o8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqrVKDmOkjTkm.diag
[2025-12-15 05:40:06] -rw-r--r--. 1 boincer umatlas     21027 Dec 15 05:40 stderr.txt
[2025-12-15 05:40:06] HITS file was successfully produced:
[2025-12-15 05:40:06] -rw-------. 1 boincer umatlas 227177911 Dec 15 05:37 shared/HITS.pool.root.1
[2025-12-15 05:40:06]  *** Contents of shared directory: ***
[2025-12-15 05:40:06] total 445624
[2025-12-15 05:40:06] -rw-r--r--. 2 boincer umatlas 221947440 Dec 14 17:03 ATLAS.root_0
[2025-12-15 05:40:06] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 17:03 start_atlas.sh
[2025-12-15 05:40:06] -rw-r--r--. 2 boincer umatlas    592396 Dec 14 17:03 input.tar.gz
[2025-12-15 05:40:06] -rw-------. 1 boincer umatlas 227177911 Dec 15 05:37 HITS.pool.root.1
[2025-12-15 05:40:06] -rw-------. 1 boincer umatlas   6574080 Dec 15 05:40 result.tar.gz
05:40:07 (569855): run_atlas exited; CPU time 73148.032985
05:40:07 (569855): called boinc_finish(0)

</stderr_txt>
]]>

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