Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:18:48 (1356918): wrapper (7.7.26015): starting
12:18:48 (1356918): wrapper: running run_atlas (--nthreads 12)
[2025-12-14 12:18:48] Arguments: --nthreads 12
[2025-12-14 12:18:48] Threads: 12
[2025-12-14 12:18:48] Checking for CVMFS
[2025-12-14 12:18:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 12:18:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 12:18:48] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 12:18:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 12:18:49] 2.11.5.0 1559483 19597 369960 154007 2 26 23509466 45568001 24731 130560 0 118560240 99.706 107617672 20520 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-14 12:18:49] CVMFS is ok
[2025-12-14 12:18:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 12:18:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 12:18:49] Further information can be found at the LHC@home message board.
[2025-12-14 12:18:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 12:18:49] Checking for apptainer binary...
[2025-12-14 12:18:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 12:18:49] Running /usr/bin/apptainer --version
[2025-12-14 12:18:49] apptainer version 1.4.1-1.el9
[2025-12-14 12:18:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 12:18:49] wns0054.triumf.lcg
[2025-12-14 12:18:49] apptainer works
[2025-12-14 12:18:49] Set ATHENA_PROC_NUMBER=12
[2025-12-14 12:18:49] Set ATHENA_CORE_NUMBER=12
[2025-12-14 12:18:49] Starting ATLAS job with PandaID=6930659958
[2025-12-14 12:18:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 12:24:30]  *** The last 200 lines of the pilot log: ***
[2025-12-14 12:24:30] 2025-12-14 20:23:41,969 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 12:24:30] 2025-12-14 20:23:41,969 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | WARNING  | wrong length of table data, x=[1765743646.0], y=[1477.0] (must be same and length>=4)
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | could have reported an average CPU frequency of 2660 MHz (4 samples)
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | correcting setup and stagein times since remote i/o verification was done
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | ..............................
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . Timing measurements:
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . get job = 0 s
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . initial setup = 4 s
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . payload setup = 18 s
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . stage-in = 1 s
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . payload execution = 59 s
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . stage-out = 0 s
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . log creation = 0 s
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | ..............................
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-14 12:24:30] 2025-12-14 20:23:41,971 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6930659958/pilotlog.txt
[2025-12-14 12:24:30] 2025-12-14 20:23:41,980 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-14 12:24:30] - Log from pilotlog.txt -
[2025-12-14 12:24:30] 2025-12-14 20:23:41,969 | INFO     | extracted standard info from prmon json
[2025-12-14 12:24:30] 2025-12-14 20:23:41,969 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 12:24:30] 2025-12-14 20:23:41,969 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 12:24:30] 2025-12-14 20:23:41,969 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 12:24:30] 2025-12-14 20:23:41,969 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | WARNING  | wrong length of table data, x=[1765743646.0], y=[1477.0] (must be same and length>=4)
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | could have reported an average CPU frequency of 2660 MHz (4 samples)
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | correcting setup and stagein times since remote i/o verification was done
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | ..............................
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . Timing measurements:
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . get job = 0 s
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . initial setup = 4 s
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . payload setup = 18 s
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . stage-in = 1 s
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . payload execution = 59 s
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . stage-out = 0 s
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . log creation = 0 s
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | ..............................
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-14 12:24:30] 2025-12-14 20:23:41,971 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6930659958/pilotlog.txt
[2025-12-14 12:24:30] 2025-12-14 20:23:41,980 | WARNING  | 
[2025-12-14 12:24:30] [begin log extracts]
[2025-12-14 12:24:30] - Log from pilotlog.txt -
[2025-12-14 12:24:30] 2025-12-14 20:23:41,969 | INFO     | extracted standard info from prmon json
[2025-12-14 12:24:30] 2025-12-14 20:23:41,969 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 12:24:30] 2025-12-14 20:23:41,969 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 12:24:30] 2025-12-14 20:23:41,969 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 12:24:30] 2025-12-14 20:23:41,969 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | WARNING  | wrong length of table data, x=[1765743646.0], y=[1477.0] (must be same and length>=4)
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | could have reported an average CPU frequency of 2660 MHz (4 samples)
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | correcting setup and stagein times since remote i/o verification was done
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | ..............................
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . Timing measurements:
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . get job = 0 s
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . initial setup = 4 s
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . payload setup = 18 s
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . stage-in = 1 s
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . payload execution = 59 s
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . stage-out = 0 s
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | . log creation = 0 s
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | ..............................
[2025-12-14 12:24:30] 2025-12-14 20:23:41,970 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-14 12:24:30] 2025-12-14 20:23:41,971 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6930659958/pilotlog.txt
[2025-12-14 12:24:30] [end log extracts]
[2025-12-14 12:24:30] 2025-12-14 20:23:41,980 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-14 12:24:30] 2025-12-14 20:23:41,981 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-14 12:24:30] 2025-12-14 20:23:42,035 | INFO     | 
[2025-12-14 12:24:30] 2025-12-14 20:23:42,035 | INFO     | job summary report
[2025-12-14 12:24:30] 2025-12-14 20:23:42,035 | INFO     | --------------------------------------------------
[2025-12-14 12:24:30] 2025-12-14 20:23:42,035 | INFO     | PanDA job id: 6930659958
[2025-12-14 12:24:30] 2025-12-14 20:23:42,035 | INFO     | task id: 47898878
[2025-12-14 12:24:30] 2025-12-14 20:23:42,036 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-14 12:21:18,727 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-14 12:24:30] 2025-12-14 20:23:42,036 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 12:24:30] 2025-12-14 20:23:42,036 | INFO     | pilot state: failed 
[2025-12-14 12:24:30] 2025-12-14 20:23:42,036 | INFO     | transexitcode: 65
[2025-12-14 12:24:30] 2025-12-14 20:23:42,036 | INFO     | exeerrorcode: 65
[2025-12-14 12:24:30] 2025-12-14 20:23:42,036 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-14 12:24:30] 2025-12-14 20:23:42,036 | INFO     | exitcode: 65
[2025-12-14 12:24:30] 2025-12-14 20:23:42,036 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-14 12:24:30] 2025-12-14 20:23:42,036 | INFO     | cpuconsumptiontime: 18 s
[2025-12-14 12:24:30] 2025-12-14 20:23:42,036 | INFO     | nevents: 0
[2025-12-14 12:24:30] 2025-12-14 20:23:42,036 | INFO     | neventsw: 0
[2025-12-14 12:24:30] 2025-12-14 20:23:42,036 | INFO     | pid: 1367643
[2025-12-14 12:24:30] 2025-12-14 20:23:42,036 | INFO     | pgrp: 1367643
[2025-12-14 12:24:30] 2025-12-14 20:23:42,036 | INFO     | corecount: 12
[2025-12-14 12:24:30] 2025-12-14 20:23:42,036 | INFO     | event service: False
[2025-12-14 12:24:30] 2025-12-14 20:23:42,036 | INFO     | sizes: {0: 2283889, 11: 2283889, 20: 2284179, 22: 2284207, 83: 2307470, 84: 2311762, 88: 2311918, 218: 2312084}
[2025-12-14 12:24:30] 2025-12-14 20:23:42,036 | INFO     | --------------------------------------------------
[2025-12-14 12:24:30] 2025-12-14 20:23:42,036 | INFO     | 
[2025-12-14 12:24:30] 2025-12-14 20:23:42,036 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-14 12:24:30] 2025-12-14 20:23:42,049 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 12:24:30] 2025-12-14 20:23:42,049 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 12:24:30] 2025-12-14 20:23:42,050 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 12:24:30] 2025-12-14 20:23:42,050 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 12:24:30] 2025-12-14 20:23:42,050 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 12:24:30] 2025-12-14 20:23:42,050 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 12:24:30] 2025-12-14 20:23:42,050 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 12:24:30] 2025-12-14 20:23:42,050 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 12:24:30] 2025-12-14 20:23:42,050 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 12:24:30] 2025-12-14 20:23:42,050 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 12:24:30] 2025-12-14 20:23:42,050 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 12:24:30] 2025-12-14 20:23:42,050 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 12:24:30] 2025-12-14 20:23:42,050 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 12:24:30] 2025-12-14 20:23:42,050 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 12:24:30] 2025-12-14 20:23:42,050 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 12:24:30] 2025-12-14 20:23:42,050 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 12:24:30] 2025-12-14 20:23:42,050 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 12:24:30] 2025-12-14 20:23:42,050 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 12:24:30] 2025-12-14 20:23:42,050 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 12:24:30] 2025-12-14 20:23:42,050 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 12:24:30] 2025-12-14 20:23:42,051 | INFO     | job 6930659958 has completed (purged errors)
[2025-12-14 12:24:30] 2025-12-14 20:23:42,051 | INFO     | overall cleanup function is called
[2025-12-14 12:24:30] 2025-12-14 20:23:43,058 | INFO     | --- collectZombieJob: --- 10, [1367643]
[2025-12-14 12:24:30] 2025-12-14 20:23:43,058 | INFO     | zombie collector waiting for pid 1367643
[2025-12-14 12:24:30] 2025-12-14 20:23:43,058 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 12:24:30] 2025-12-14 20:23:43,058 | INFO     | collected zombie processes
[2025-12-14 12:24:30] 2025-12-14 20:23:43,058 | INFO     | will attempt to kill all subprocesses of pid=1367643
[2025-12-14 12:24:30] 2025-12-14 20:23:43,887 | INFO     | process IDs to be killed: [1367643] (in reverse order)
[2025-12-14 12:24:30] 2025-12-14 20:23:44,074 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 12:24:30] 2025-12-14 20:23:44,075 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 12:24:30] 2025-12-14 20:23:44,089 | INFO     | did not find any defunct processes belonging to 1367643
[2025-12-14 12:24:30] 2025-12-14 20:23:44,096 | INFO     | did not find any defunct processes belonging to 1367643
[2025-12-14 12:24:30] 2025-12-14 20:23:44,097 | INFO     | ready for new job
[2025-12-14 12:24:30] 2025-12-14 20:23:44,097 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 12:24:30] 2025-12-14 20:23:44,098 | INFO     | ***************************************
[2025-12-14 12:24:30] 2025-12-14 20:23:44,098 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 12:24:30] 2025-12-14 20:23:44,098 | INFO     | ***************************************
[2025-12-14 12:24:30] 2025-12-14 20:23:44,098 | INFO     | 
[2025-12-14 12:24:30] 2025-12-14 20:23:44,100 | INFO     | architecture information:
[2025-12-14 12:24:30] 2025-12-14 20:23:44,100 | INFO     | executing command: cat /etc/os-release
[2025-12-14 12:24:30] 2025-12-14 20:23:44,113 | INFO     | cat /etc/os-release:
[2025-12-14 12:24:30] NAME="CentOS Linux"
[2025-12-14 12:24:30] VERSION="7 (Core)"
[2025-12-14 12:24:30] ID="centos"
[2025-12-14 12:24:30] ID_LIKE="rhel fedora"
[2025-12-14 12:24:30] VERSION_ID="7"
[2025-12-14 12:24:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 12:24:30] ANSI_COLOR="0;31"
[2025-12-14 12:24:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 12:24:30] HOME_URL="https://www.centos.org/"
[2025-12-14 12:24:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 12:24:30] 
[2025-12-14 12:24:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 12:24:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 12:24:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 12:24:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 12:24:30] 
[2025-12-14 12:24:30] 2025-12-14 20:23:44,113 | INFO     | ***************************************
[2025-12-14 12:24:30] 2025-12-14 20:23:44,617 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-14 12:24:30] 2025-12-14 20:23:44,675 | INFO     | sufficient remaining disk space (1911452336128 B)
[2025-12-14 12:24:30] 2025-12-14 20:23:44,676 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 12:24:30] 2025-12-14 20:23:44,676 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 12:24:30] 2025-12-14 20:23:44,676 | INFO     | update_server=False
[2025-12-14 12:24:30] 2025-12-14 20:23:44,676 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 12:24:30] 2025-12-14 20:23:44,676 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 12:24:30] 2025-12-14 20:23:44,677 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 12:24:30] 2025-12-14 20:23:44,677 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 12:24:30] 2025-12-14 20:23:44,682 | INFO     | aborting loop
[2025-12-14 12:24:30] 2025-12-14 20:23:44,744 | INFO     | all job control threads have been joined
[2025-12-14 12:24:30] 2025-12-14 20:23:44,841 | INFO     | all data control threads have been joined
[2025-12-14 12:24:30] 2025-12-14 20:23:45,682 | INFO     | [job] retrieve thread has finished
[2025-12-14 12:24:30] 2025-12-14 20:23:45,688 | INFO     | [job] job monitor thread has finished
[2025-12-14 12:24:30] 2025-12-14 20:23:45,746 | INFO     | [data] copytool_in thread has finished
[2025-12-14 12:24:30] 2025-12-14 20:23:45,750 | INFO     | [job] control thread has finished
[2025-12-14 12:24:30] 2025-12-14 20:23:45,758 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 12:24:30] 2025-12-14 20:23:45,847 | INFO     | [data] control thread has finished
[2025-12-14 12:24:30] 2025-12-14 20:23:45,891 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 12:24:30] 2025-12-14 20:23:45,954 | INFO     | all payload control threads have been joined
[2025-12-14 12:24:30] 2025-12-14 20:23:46,045 | INFO     | [payload] validate_post thread has finished
[2025-12-14 12:24:30] 2025-12-14 20:23:46,683 | INFO     | [data] copytool_out thread has finished
[2025-12-14 12:24:30] 2025-12-14 20:23:46,713 | INFO     | [payload] failed_post thread has finished
[2025-12-14 12:24:30] 2025-12-14 20:23:46,801 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 12:24:30] 2025-12-14 20:23:46,871 | INFO     | [job] validate thread has finished
[2025-12-14 12:24:30] 2025-12-14 20:23:46,960 | INFO     | [payload] control thread has finished
[2025-12-14 12:24:30] 2025-12-14 20:23:47,053 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 12:24:30] 2025-12-14 20:23:47,146 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 12:24:30] 2025-12-14 20:23:48,059 | INFO     | [job] queue monitor thread has finished
[2025-12-14 12:24:30] 2025-12-14 20:23:48,698 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 12:24:30] 2025-12-14 20:24:14,522 | INFO     | PID=1360710 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 12:24:30] 2025-12-14 20:24:14,522 | INFO     | .. there are 35 such processes running
[2025-12-14 12:24:30] 2025-12-14 20:24:14,522 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 12:24:30] 2025-12-14 20:24:14,522 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 12:24:30] 2025-12-14 20:24:14,522 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 12:24:30] 2025-12-14 20:24:23,139 | INFO     | [monitor] cgroup control has ended
[2025-12-14 12:24:30] 2025-12-14 20:24:24,506 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140298124932928)>', '<ExcThread(monitor, started 140297413568256)>']
[2025-12-14 12:24:30] 2025-12-14 20:24:24,593 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 12:24:30] 2025-12-14 20:24:24,593 | INFO     | [monitor] control thread has ended
[2025-12-14 12:24:30] 2025-12-14 20:24:29,532 | INFO     | all workflow threads have been joined
[2025-12-14 12:24:30] 2025-12-14 20:24:29,532 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 12:24:30] 2025-12-14 20:24:29,532 | INFO     | traces error code: 0
[2025-12-14 12:24:30] 2025-12-14 20:24:29,532 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 12:24:30] 2025-12-14 20:24:29,739 [wrapper] ==== pilot stdout END ====
[2025-12-14 12:24:30] 2025-12-14 20:24:29,771 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 12:24:30] 2025-12-14 20:24:29,798 [wrapper] pilotpid: 1360710
[2025-12-14 12:24:30] 2025-12-14 20:24:29,829 [wrapper] Pilot exit status: 0
[2025-12-14 12:24:30] 2025-12-14 20:24:29,840 [wrapper] pandaids: 6930659958
[2025-12-14 12:24:30] 2025-12-14 20:24:29,922 [wrapper] cleanup supervisor_pilot 1360716 1360711
[2025-12-14 12:24:30] 2025-12-14 20:24:29,925 [wrapper] Test setup, not cleaning
[2025-12-14 12:24:30] 2025-12-14 20:24:29,927 [wrapper] apfmon messages muted
[2025-12-14 12:24:30] 2025-12-14 20:24:29,929 [wrapper] ==== wrapper stdout END ====
[2025-12-14 12:24:30] 2025-12-14 20:24:29,930 [wrapper] ==== wrapper stderr END ====
[2025-12-14 12:24:30]  *** Error codes and diagnostics ***
[2025-12-14 12:24:30]     "exeErrorCode": 65,
[2025-12-14 12:24:30]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-14 12:24:30]     "pilotErrorCode": 1305,
[2025-12-14 12:24:30]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-14 12:24:30]  *** Listing of results directory ***
[2025-12-14 12:24:30] total 196764
[2025-12-14 12:24:30] -rw-r--r--. 1 boinc boinc    579449 Dec 14 07:56 pilot3.tar.gz
[2025-12-14 12:24:30] -rw-r--r--. 1 boinc boinc      5112 Dec 14 07:56 queuedata.json
[2025-12-14 12:24:30] -rwx------. 1 boinc boinc     36322 Dec 14 07:56 runpilot2-wrapper.sh
[2025-12-14 12:24:30] -rw-r--r--. 1 boinc boinc       100 Dec 14 12:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 12:24:30] -rwxr-xr-x. 1 boinc boinc      7986 Dec 14 12:18 run_atlas
[2025-12-14 12:24:30] -rw-r--r--. 1 boinc boinc       105 Dec 14 12:18 job.xml
[2025-12-14 12:24:30] -rw-r--r--. 1 boinc boinc      6596 Dec 14 12:18 init_data.xml
[2025-12-14 12:24:30] -rw-r--r--. 2 boinc boinc 197341966 Dec 14 12:18 EVNT.47898875._000054.pool.root.1
[2025-12-14 12:24:30] -rw-r--r--. 2 boinc boinc     15847 Dec 14 12:18 start_atlas.sh
[2025-12-14 12:24:30] drwxrwx--x. 2 boinc boinc      4096 Dec 14 12:18 shared
[2025-12-14 12:24:30] -rw-r--r--. 2 boinc boinc    592390 Dec 14 12:18 input.tar.gz
[2025-12-14 12:24:30] -rw-r--r--. 1 boinc boinc         0 Dec 14 12:18 boinc_lockfile
[2025-12-14 12:24:30] -rw-r--r--. 1 boinc boinc      2499 Dec 14 12:18 pandaJob.out
[2025-12-14 12:24:30] -rw-------. 1 boinc boinc    991024 Dec 14 12:19 agis_schedconf.cvmfs.json
[2025-12-14 12:24:30] -rw-------. 1 boinc boinc   1516240 Dec 14 12:19 agis_ddmendpoints.agis.ALL.json
[2025-12-14 12:24:30] drwx------. 5 boinc boinc      4096 Dec 14 12:19 pilot3
[2025-12-14 12:24:30] -rw-r--r--. 1 boinc boinc       524 Dec 14 12:21 boinc_task_state.xml
[2025-12-14 12:24:30] -rw-------. 1 boinc boinc       960 Dec 14 12:21 memory_monitor_summary.json
[2025-12-14 12:24:30] -rw-------. 1 boinc boinc     21766 Dec 14 12:21 log.47898878._001359.job.log.tgz.1
[2025-12-14 12:24:30] -rw-------. 1 boinc boinc        95 Dec 14 12:23 pilot_heartbeat.json
[2025-12-14 12:24:30] -rw-------. 1 boinc boinc      8383 Dec 14 12:23 heartbeat.json
[2025-12-14 12:24:30] -rw-r--r--. 1 boinc boinc        22 Dec 14 12:24 wrapper_checkpoint.txt
[2025-12-14 12:24:30] -rw-------. 1 boinc boinc      4823 Dec 14 12:24 pilotlog.txt
[2025-12-14 12:24:30] -rw-r--r--. 1 boinc boinc      8192 Dec 14 12:24 boinc_mmap_file
[2025-12-14 12:24:30] -rw-------. 1 boinc boinc     93245 Dec 14 12:24 log.47898878._001359.job.log.1
[2025-12-14 12:24:30] -rw-------. 1 boinc boinc       188 Dec 14 12:24 output.list
[2025-12-14 12:24:30] -rw-r--r--. 1 boinc boinc       620 Dec 14 12:24 runtime_log
[2025-12-14 12:24:30] -rw-------. 1 boinc boinc    133120 Dec 14 12:24 result.tar.gz
[2025-12-14 12:24:30] -rw-r--r--. 1 boinc boinc      8636 Dec 14 12:24 runtime_log.err
[2025-12-14 12:24:30] -rw-------. 1 boinc boinc       647 Dec 14 12:24 25YMDmKd3o8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJqVKDmF2qFIn.diag
[2025-12-14 12:24:30] -rw-r--r--. 1 boinc boinc     21775 Dec 14 12:24 stderr.txt
[2025-12-14 12:24:30] No HITS result produced
[2025-12-14 12:24:30]  *** Contents of shared directory: ***
[2025-12-14 12:24:30] total 193452
[2025-12-14 12:24:30] -rw-r--r--. 2 boinc boinc 197341966 Dec 14 12:18 ATLAS.root_0
[2025-12-14 12:24:30] -rw-r--r--. 2 boinc boinc     15847 Dec 14 12:18 start_atlas.sh
[2025-12-14 12:24:30] -rw-r--r--. 2 boinc boinc    592390 Dec 14 12:18 input.tar.gz
[2025-12-14 12:24:30] -rw-------. 1 boinc boinc    133120 Dec 14 12:24 result.tar.gz
12:24:32 (1356918): run_atlas exited; CPU time 28.576495
12:24:32 (1356918): called boinc_finish(0)

</stderr_txt>
]]>

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