Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:26:00 (780193): wrapper (7.7.26015): starting
22:26:00 (780193): wrapper: running run_atlas (--nthreads 4)
[2025-12-14 22:26:00] Arguments: --nthreads 4
[2025-12-14 22:26:00] Threads: 4
[2025-12-14 22:26:00] Checking for CVMFS
[2025-12-14 22:26:00] No cvmfs_config command found, will try listing directly
[2025-12-14 22:26:00] CVMFS is ok
[2025-12-14 22:26:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 22:26:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 22:26:00] Further information can be found at the LHC@home message board.
[2025-12-14 22:26:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 22:26:00] Checking for apptainer binary...
[2025-12-14 22:26:00] which: no apptainer in ((null))
[2025-12-14 22:26:00] apptainer is not installed, using version from CVMFS
[2025-12-14 22:26:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 22:26:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2025-12-14 22:26:00] apptainer works
[2025-12-14 22:26:00] Set ATHENA_PROC_NUMBER=4
[2025-12-14 22:26:00] Set ATHENA_CORE_NUMBER=4
[2025-12-14 22:26:00] Starting ATLAS job with PandaID=6930221459
[2025-12-14 22:26:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 13:52:05]  *** The last 200 lines of the pilot log: ***
[2025-12-15 13:52:05] 2025-12-15 12:36:45,332 | INFO     | .. there are 2 such processes running
[2025-12-15 13:52:05] 2025-12-15 12:36:46,333 | INFO     | time since job start (54634s) is within the limit (174528.0s)
[2025-12-15 13:52:05] 2025-12-15 12:36:47,232 | INFO     | monitor loop #3953: job 0:6930221459 is in state 'finished'
[2025-12-15 13:52:05] 2025-12-15 12:36:47,232 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 13:52:05] 2025-12-15 12:36:47,705 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-15 13:52:05] 2025-12-15 12:36:47,712 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2607.4558249999995
[2025-12-15 13:52:05] 2025-12-15 12:36:47,720 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6930221459/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 13:52:05] 2025-12-15 12:36:47,721 | INFO     | extracted standard info from prmon json
[2025-12-15 13:52:05] 2025-12-15 12:36:47,721 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 13:52:05] 2025-12-15 12:36:47,721 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 13:52:05] 2025-12-15 12:36:47,738 | INFO     | fitting pss+swap vs Time
[2025-12-15 13:52:05] 2025-12-15 12:36:47,741 | INFO     | sum of square deviations: 223049837920.0
[2025-12-15 13:52:05] 2025-12-15 12:36:47,760 | INFO     | sum of deviations: 751961424395.5
[2025-12-15 13:52:05] 2025-12-15 12:36:47,760 | INFO     | mean x: 1765774900.5
[2025-12-15 13:52:05] 2025-12-15 12:36:47,761 | INFO     | mean y: 2705475.7667410714
[2025-12-15 13:52:05] 2025-12-15 12:36:47,761 | INFO     | intersect: -5950200035.054723
[2025-12-15 13:52:05] 2025-12-15 12:36:47,762 | INFO     | chi2: 4.905098987529687
[2025-12-15 13:52:05] 2025-12-15 12:36:47,763 | INFO     | sum of square deviations: 219336540390.0
[2025-12-15 13:52:05] 2025-12-15 12:36:47,783 | INFO     | sum of deviations: 994596466648.9995
[2025-12-15 13:52:05] 2025-12-15 12:36:47,783 | INFO     | mean x: 1765774748.0
[2025-12-15 13:52:05] 2025-12-15 12:36:47,783 | INFO     | mean y: 2715428.8776655444
[2025-12-15 13:52:05] 2025-12-15 12:36:47,783 | INFO     | intersect: -8004310314.010808
[2025-12-15 13:52:05] 2025-12-15 12:36:47,785 | INFO     | chi2: 2.2534968536797977
[2025-12-15 13:52:05] 2025-12-15 12:36:47,785 | INFO     | current chi2=2.2534968536797977 (change=54.05807590409696 %)
[2025-12-15 13:52:05] 2025-12-15 12:36:47,786 | INFO     | sum of square deviations: 215664685497.5
[2025-12-15 13:52:05] 2025-12-15 12:36:47,805 | INFO     | sum of deviations: 990684242629.0004
[2025-12-15 13:52:05] 2025-12-15 12:36:47,806 | INFO     | mean x: 1765774595.5
[2025-12-15 13:52:05] 2025-12-15 12:36:47,806 | INFO     | mean y: 2715264.2392776525
[2025-12-15 13:52:05] 2025-12-15 12:36:47,806 | INFO     | intersect: -8108603766.788291
[2025-12-15 13:52:05] 2025-12-15 12:36:47,807 | INFO     | chi2: 2.2313053803610057
[2025-12-15 13:52:05] 2025-12-15 12:36:47,807 | INFO     | current chi2=2.2313053803610057 (change=0.9847572355184315 %)
[2025-12-15 13:52:05] 2025-12-15 12:36:47,808 | INFO     | right removable region: 885
[2025-12-15 13:52:05] 2025-12-15 12:36:47,809 | INFO     | sum of square deviations: 219336540390.0
[2025-12-15 13:52:05] 2025-12-15 12:36:47,828 | INFO     | sum of deviations: 528492015269.0001
[2025-12-15 13:52:05] 2025-12-15 12:36:47,828 | INFO     | mean x: 1765775053.0
[2025-12-15 13:52:05] 2025-12-15 12:36:47,828 | INFO     | mean y: 2714641.952861953
[2025-12-15 13:52:05] 2025-12-15 12:36:47,829 | INFO     | intersect: -4251925349.233221
[2025-12-15 13:52:05] 2025-12-15 12:36:47,830 | INFO     | chi2: 2.8336878465784325
[2025-12-15 13:52:05] 2025-12-15 12:36:47,830 | INFO     | current chi2=2.8336878465784325 (change=42.22975206448304 %)
[2025-12-15 13:52:05] 2025-12-15 12:36:47,831 | INFO     | sum of square deviations: 215664685497.5
[2025-12-15 13:52:05] 2025-12-15 12:36:47,851 | INFO     | sum of deviations: 513364730860.0001
[2025-12-15 13:52:05] 2025-12-15 12:36:47,851 | INFO     | mean x: 1765775205.5
[2025-12-15 13:52:05] 2025-12-15 12:36:47,851 | INFO     | mean y: 2715269.261851016
[2025-12-15 13:52:05] 2025-12-15 12:36:47,851 | INFO     | intersect: -4200507483.873024
[2025-12-15 13:52:05] 2025-12-15 12:36:47,852 | INFO     | chi2: 2.831055740421564
[2025-12-15 13:52:05] 2025-12-15 12:36:47,853 | INFO     | current chi2=2.831055740421564 (change=0.09288624221777074 %)
[2025-12-15 13:52:05] 2025-12-15 12:36:47,853 | INFO     | left removable region: 20
[2025-12-15 13:52:05] 2025-12-15 12:36:47,854 | INFO     | sum of square deviations: 200690200080.0
[2025-12-15 13:52:05] 2025-12-15 12:36:47,872 | INFO     | sum of deviations: 746228446663.9998
[2025-12-15 13:52:05] 2025-12-15 12:36:47,872 | INFO     | mean x: 1765775175.0
[2025-12-15 13:52:05] 2025-12-15 12:36:47,872 | INFO     | mean y: 2725297.9352601157
[2025-12-15 13:52:05] 2025-12-15 12:36:47,873 | INFO     | intersect: -6562974798.39653
[2025-12-15 13:52:05] 2025-12-15 12:36:47,874 | INFO     | chi2: 0.12513883715135388
[2025-12-15 13:52:05] 2025-12-15 12:36:47,874 | INFO     | current memory leak: 3.72 B/s (using 865 data points, chi2=0.13)
[2025-12-15 13:52:05] 2025-12-15 12:36:47,875 | INFO     | could have reported an average CPU frequency of 2549 MHz (34 samples)
[2025-12-15 13:52:05] 2025-12-15 12:36:47,875 | INFO     | ..............................
[2025-12-15 13:52:05] 2025-12-15 12:36:47,875 | INFO     | . Timing measurements:
[2025-12-15 13:52:05] 2025-12-15 12:36:47,875 | INFO     | . get job = 0 s
[2025-12-15 13:52:05] 2025-12-15 12:36:47,876 | INFO     | . initial setup = 1 s
[2025-12-15 13:52:05] 2025-12-15 12:36:47,876 | INFO     | . payload setup = 10 s
[2025-12-15 13:52:05] 2025-12-15 12:36:47,876 | INFO     | . stage-in = 0 s
[2025-12-15 13:52:05] 2025-12-15 12:36:47,876 | INFO     | . payload execution = 54599 s
[2025-12-15 13:52:05] 2025-12-15 12:36:47,876 | INFO     | . stage-out = 2 s
[2025-12-15 13:52:05] 2025-12-15 12:36:47,876 | INFO     | . log creation = 0 s
[2025-12-15 13:52:05] 2025-12-15 12:36:47,876 | INFO     | ..............................
[2025-12-15 13:52:05] 2025-12-15 12:36:47,981 | INFO     | 
[2025-12-15 13:52:05] 2025-12-15 12:36:47,981 | INFO     | job summary report
[2025-12-15 13:52:05] 2025-12-15 12:36:47,981 | INFO     | --------------------------------------------------
[2025-12-15 13:52:05] 2025-12-15 12:36:47,981 | INFO     | PanDA job id: 6930221459
[2025-12-15 13:52:05] 2025-12-15 12:36:47,981 | INFO     | task id: 47906416
[2025-12-15 13:52:05] 2025-12-15 12:36:47,981 | INFO     | errors: (none)
[2025-12-15 13:52:05] 2025-12-15 12:36:47,982 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 13:52:05] 2025-12-15 12:36:47,982 | INFO     | pilot state: finished 
[2025-12-15 13:52:05] 2025-12-15 12:36:47,982 | INFO     | transexitcode: 0
[2025-12-15 13:52:05] 2025-12-15 12:36:47,982 | INFO     | exeerrorcode: 0
[2025-12-15 13:52:05] 2025-12-15 12:36:47,982 | INFO     | exeerrordiag: 
[2025-12-15 13:52:05] 2025-12-15 12:36:47,982 | INFO     | exitcode: 0
[2025-12-15 13:52:05] 2025-12-15 12:36:47,982 | INFO     | exitmsg: OK
[2025-12-15 13:52:05] 2025-12-15 12:36:47,982 | INFO     | cpuconsumptiontime: 214337 s
[2025-12-15 13:52:05] 2025-12-15 12:36:47,983 | INFO     | nevents: 1000
[2025-12-15 13:52:05] 2025-12-15 12:36:47,983 | INFO     | neventsw: 0
[2025-12-15 13:52:05] 2025-12-15 12:36:47,983 | INFO     | pid: 793696
[2025-12-15 13:52:05] 2025-12-15 12:36:47,983 | INFO     | pgrp: 793696
[2025-12-15 13:52:05] 2025-12-15 12:36:47,983 | INFO     | corecount: 4
[2025-12-15 13:52:05] 2025-12-15 12:36:47,983 | INFO     | event service: False
[2025-12-15 13:52:05] 2025-12-15 12:36:47,983 | INFO     | sizes: {0: 2284575, 1: 2284575, 4: 2284865, 11: 2284893, 54614: 2353120, 54616: 2362320, 54620: 2362510}
[2025-12-15 13:52:05] 2025-12-15 12:36:47,983 | INFO     | --------------------------------------------------
[2025-12-15 13:52:05] 2025-12-15 12:36:47,983 | INFO     | 
[2025-12-15 13:52:05] 2025-12-15 12:36:47,984 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-12-15 13:52:05] 2025-12-15 12:36:48,001 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 13:52:05] 2025-12-15 12:36:48,002 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 13:52:05] 2025-12-15 12:36:48,002 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 13:52:05] 2025-12-15 12:36:48,002 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 13:52:05] 2025-12-15 12:36:48,002 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 13:52:05] 2025-12-15 12:36:48,002 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 13:52:05] 2025-12-15 12:36:48,003 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 13:52:05] 2025-12-15 12:36:48,003 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 13:52:05] 2025-12-15 12:36:48,003 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 13:52:05] 2025-12-15 12:36:48,003 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 13:52:05] 2025-12-15 12:36:48,003 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 13:52:05] 2025-12-15 12:36:48,003 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 13:52:05] 2025-12-15 12:36:48,003 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 13:52:05] 2025-12-15 12:36:48,004 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 13:52:05] 2025-12-15 12:36:48,004 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 13:52:05] 2025-12-15 12:36:48,004 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 13:52:05] 2025-12-15 12:36:48,004 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 13:52:05] 2025-12-15 12:36:48,004 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 13:52:05] 2025-12-15 12:36:48,004 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 13:52:05] 2025-12-15 12:36:48,004 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 13:52:05] 2025-12-15 12:36:48,005 | INFO     | job 6930221459 has completed (purged errors)
[2025-12-15 13:52:05] 2025-12-15 12:36:48,005 | INFO     | overall cleanup function is called
[2025-12-15 13:52:05] 2025-12-15 12:36:49,019 | INFO     | --- collectZombieJob: --- 10, [793696]
[2025-12-15 13:52:05] 2025-12-15 12:36:49,019 | INFO     | zombie collector waiting for pid 793696
[2025-12-15 13:52:05] 2025-12-15 12:36:49,019 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 13:52:05] 2025-12-15 12:36:49,019 | INFO     | collected zombie processes
[2025-12-15 13:52:05] 2025-12-15 12:36:49,020 | INFO     | will attempt to kill all subprocesses of pid=793696
[2025-12-15 13:52:05] 2025-12-15 12:36:49,368 | INFO     | process IDs to be killed: [793696] (in reverse order)
[2025-12-15 13:52:05] 2025-12-15 12:36:49,445 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 13:52:05] 2025-12-15 12:36:49,446 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 13:52:05] 2025-12-15 12:36:49,457 | INFO     | did not find any defunct processes belonging to 793696
[2025-12-15 13:52:05] 2025-12-15 12:36:49,466 | INFO     | did not find any defunct processes belonging to 793696
[2025-12-15 13:52:05] 2025-12-15 12:36:49,467 | INFO     | ready for new job
[2025-12-15 13:52:05] 2025-12-15 12:36:49,467 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 13:52:05] 2025-12-15 12:36:49,471 | INFO     | ***************************************
[2025-12-15 13:52:05] 2025-12-15 12:36:49,471 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 13:52:05] 2025-12-15 12:36:49,472 | INFO     | ***************************************
[2025-12-15 13:52:05] 2025-12-15 12:36:49,472 | INFO     | 
[2025-12-15 13:52:05] 2025-12-15 12:36:49,474 | INFO     | architecture information:
[2025-12-15 13:52:05] 2025-12-15 12:36:49,475 | INFO     | executing command: cat /etc/os-release
[2025-12-15 13:52:05] 2025-12-15 12:36:49,487 | INFO     | cat /etc/os-release:
[2025-12-15 13:52:05] NAME="CentOS Linux"
[2025-12-15 13:52:05] VERSION="7 (Core)"
[2025-12-15 13:52:05] ID="centos"
[2025-12-15 13:52:05] ID_LIKE="rhel fedora"
[2025-12-15 13:52:05] VERSION_ID="7"
[2025-12-15 13:52:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 13:52:05] ANSI_COLOR="0;31"
[2025-12-15 13:52:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 13:52:05] HOME_URL="https://www.centos.org/"
[2025-12-15 13:52:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 13:52:05] 
[2025-12-15 13:52:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 13:52:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 13:52:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 13:52:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 13:52:05] 
[2025-12-15 13:52:05] 2025-12-15 12:36:49,487 | INFO     | ***************************************
[2025-12-15 13:52:05] 2025-12-15 12:36:49,990 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-12-15 13:52:05] 2025-12-15 12:36:50,003 | INFO     | sufficient remaining disk space (1673371058176 B)
[2025-12-15 13:52:05] 2025-12-15 12:36:50,003 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 13:52:05] 2025-12-15 12:36:50,003 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 13:52:05] 2025-12-15 12:36:50,003 | INFO     | update_server=False
[2025-12-15 13:52:05] 2025-12-15 12:36:50,003 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 13:52:05] 2025-12-15 12:36:50,004 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 13:52:05] 2025-12-15 12:36:50,085 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 13:52:05] 2025-12-15 12:36:50,532 | INFO     | all payload control threads have been joined
[2025-12-15 13:52:05] 2025-12-15 12:36:50,660 | INFO     | all data control threads have been joined
[2025-12-15 13:52:05] 2025-12-15 12:36:50,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 13:52:05] 2025-12-15 12:36:50,741 | INFO     | aborting loop
[2025-12-15 13:52:05] 2025-12-15 12:36:50,798 | INFO     | all job control threads have been joined
[2025-12-15 13:52:05] 2025-12-15 12:36:51,004 | INFO     | [job] retrieve thread has finished
[2025-12-15 13:52:05] 2025-12-15 12:36:51,115 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 13:52:05] 2025-12-15 12:36:51,204 | INFO     | [job] validate thread has finished
[2025-12-15 13:52:05] 2025-12-15 12:36:51,356 | INFO     | [data] copytool_in thread has finished
[2025-12-15 13:52:05] 2025-12-15 12:36:51,537 | INFO     | [payload] control thread has finished
[2025-12-15 13:52:05] 2025-12-15 12:36:51,586 | INFO     | [payload] failed_post thread has finished
[2025-12-15 13:52:05] 2025-12-15 12:36:51,610 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 13:52:05] 2025-12-15 12:36:51,663 | INFO     | [data] control thread has finished
[2025-12-15 13:52:05] 2025-12-15 12:36:51,746 | INFO     | [job] job monitor thread has finished
[2025-12-15 13:52:05] 2025-12-15 12:36:51,799 | INFO     | [job] control thread has finished
[2025-12-15 13:52:05] 2025-12-15 12:36:51,816 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 13:52:05] 2025-12-15 12:36:52,006 | INFO     | [data] copytool_out thread has finished
[2025-12-15 13:52:05] 2025-12-15 12:36:52,070 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 13:52:05] 2025-12-15 12:36:52,457 | INFO     | [payload] validate_post thread has finished
[2025-12-15 13:52:05] 2025-12-15 12:36:52,991 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 13:52:05] 2025-12-15 12:36:53,997 | INFO     | [job] queue monitor thread has finished
[2025-12-15 13:52:05] 2025-12-15 12:36:54,091 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 13:52:05] 2025-12-15 12:37:19,837 | INFO     | PID=786268 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-15 13:52:05] 2025-12-15 12:37:19,837 | INFO     | .. there are 2 such processes running
[2025-12-15 13:52:05] 2025-12-15 12:37:19,838 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 13:52:05] 2025-12-15 12:37:19,838 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 13:52:05] 2025-12-15 12:37:19,838 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 13:52:05] 2025-12-15 12:37:41,955 | INFO     | [monitor] cgroup control has ended
[2025-12-15 13:52:05] 2025-12-15 12:37:42,762 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22437029377856)>', '<ExcThread(monitor, started 22436789581568)>']
[2025-12-15 13:52:05] 2025-12-15 12:37:42,940 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 13:52:05] 2025-12-15 12:37:42,940 | INFO     | [monitor] control thread has ended
[2025-12-15 13:52:05] 2025-12-15 12:37:47,787 | INFO     | all workflow threads have been joined
[2025-12-15 13:52:05] 2025-12-15 12:37:47,787 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 13:52:05] 2025-12-15 12:37:47,788 | INFO     | traces error code: 0
[2025-12-15 13:52:05] 2025-12-15 12:37:47,788 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 13:52:05] 2025-12-15 12:37:47,910 [wrapper] ==== pilot stdout END ====
[2025-12-15 13:52:05] 2025-12-15 12:37:47,913 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 13:52:05] 2025-12-15 12:37:47,915 [wrapper] pilotpid: 786268
[2025-12-15 13:52:05] 2025-12-15 12:37:47,917 [wrapper] Pilot exit status: 0
[2025-12-15 13:52:05] 2025-12-15 12:37:47,926 [wrapper] pandaids: 6930221459
[2025-12-15 13:52:05] 2025-12-15 12:37:47,995 [wrapper] cleanup supervisor_pilot 1470969 786269
[2025-12-15 13:52:05] 2025-12-15 12:37:47,998 [wrapper] Test setup, not cleaning
[2025-12-15 13:52:05] 2025-12-15 12:37:48,000 [wrapper] apfmon messages muted
[2025-12-15 13:52:05] 2025-12-15 12:37:48,002 [wrapper] ==== wrapper stdout END ====
[2025-12-15 13:52:05] 2025-12-15 12:37:48,004 [wrapper] ==== wrapper stderr END ====
[2025-12-15 13:52:05]  *** Error codes and diagnostics ***
[2025-12-15 13:52:05]     "exeErrorCode": 0,
[2025-12-15 13:52:05]     "exeErrorDiag": "",
[2025-12-15 13:52:05]     "pilotErrorCode": 0,
[2025-12-15 13:52:05]     "pilotErrorDiag": "",
[2025-12-15 13:52:05]  *** Listing of results directory ***
[2025-12-15 13:52:05] total 949588
[2025-12-15 13:52:05] -rw-r--r-- 1 boinc boinc    579449 Dec 14 09:33 pilot3.tar.gz
[2025-12-15 13:52:05] -rwx------ 1 boinc boinc     36322 Dec 14 09:36 runpilot2-wrapper.sh
[2025-12-15 13:52:05] -rw-r--r-- 1 boinc boinc      5112 Dec 14 09:39 queuedata.json
[2025-12-15 13:52:05] -rw-r--r-- 1 boinc boinc       100 Dec 14 21:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 13:52:05] -rwxr-xr-x 1 boinc boinc      7986 Dec 14 21:26 run_atlas
[2025-12-15 13:52:05] -rw-r--r-- 1 boinc boinc       105 Dec 14 21:26 job.xml
[2025-12-15 13:52:05] -rw-r--r-- 2 boinc boinc 327469493 Dec 14 22:26 EVNT.47906413._000004.pool.root.1
[2025-12-15 13:52:05] -rw-r--r-- 1 boinc boinc      6425 Dec 14 22:26 init_data.xml
[2025-12-15 13:52:05] -rw-r--r-- 2 boinc boinc     15847 Dec 14 22:26 start_atlas.sh
[2025-12-15 13:52:05] drwxrwx--x 2 boinc boinc      4096 Dec 14 22:26 shared
[2025-12-15 13:52:05] -rw-r--r-- 2 boinc boinc    592595 Dec 14 22:26 input.tar.gz
[2025-12-15 13:52:05] -rw-r--r-- 1 boinc boinc         0 Dec 14 22:26 boinc_lockfile
[2025-12-15 13:52:05] -rw-r--r-- 1 boinc boinc      2852 Dec 14 22:26 pandaJob.out
[2025-12-15 13:52:05] -rw------- 1 boinc boinc    991024 Dec 14 22:26 agis_schedconf.cvmfs.json
[2025-12-15 13:52:05] drwx------ 5 boinc boinc      4096 Dec 14 22:26 pilot3
[2025-12-15 13:52:05] -rw-r--r-- 1 boinc boinc       531 Dec 15 13:31 boinc_task_state.xml
[2025-12-15 13:52:05] -rw------- 1 boinc boinc 622164705 Dec 15 13:36 HITS.47906416._000019.pool.root.1
[2025-12-15 13:52:05] -rw------- 1 boinc boinc      1044 Dec 15 13:36 memory_monitor_summary.json
[2025-12-15 13:52:05] -rw------- 1 boinc boinc   1516240 Dec 15 13:36 agis_ddmendpoints.agis.ALL.json
[2025-12-15 13:52:05] -rw------- 1 boinc boinc   1719718 Dec 15 13:36 log.47906416._000019.job.log.tgz.1
[2025-12-15 13:52:05] -rw------- 1 boinc boinc     27413 Dec 15 13:36 heartbeat.json
[2025-12-15 13:52:05] -rw------- 1 boinc boinc        95 Dec 15 13:37 pilot_heartbeat.json
[2025-12-15 13:52:05] -rw------- 1 boinc boinc      4833 Dec 15 13:37 pilotlog.txt
[2025-12-15 13:52:05] -rw------- 1 boinc boinc   7676646 Dec 15 13:37 log.47906416._000019.job.log.1
[2025-12-15 13:52:05] -rw------- 1 boinc boinc       353 Dec 15 13:37 output.list
[2025-12-15 13:52:05] -rw-r--r-- 1 boinc boinc       620 Dec 15 13:37 runtime_log
[2025-12-15 13:52:05] -rw------- 1 boinc boinc   9431040 Dec 15 13:37 result.tar.gz
[2025-12-15 13:52:05] -rw-r--r-- 1 boinc boinc      9206 Dec 15 13:37 runtime_log.err
[2025-12-15 13:52:05] -rw------- 1 boinc boinc       670 Dec 15 13:37 HZIKDm8lwo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEIVKDmhz0xOm.diag
[2025-12-15 13:52:05] -rw-r--r-- 1 boinc boinc        27 Dec 15 13:52 wrapper_checkpoint.txt
[2025-12-15 13:52:05] -rw-r--r-- 1 boinc boinc      8192 Dec 15 13:52 boinc_mmap_file
[2025-12-15 13:52:05] -rw-r--r-- 1 boinc boinc     20912 Dec 15 13:52 stderr.txt
[2025-12-15 13:52:05] HITS file was successfully produced:
[2025-12-15 13:52:05] -rw------- 1 boinc boinc 622164705 Dec 15 13:36 shared/HITS.pool.root.1
[2025-12-15 13:52:05]  *** Contents of shared directory: ***
[2025-12-15 13:52:05] total 937196
[2025-12-15 13:52:05] -rw-r--r-- 2 boinc boinc 327469493 Dec 14 22:26 ATLAS.root_0
[2025-12-15 13:52:05] -rw-r--r-- 2 boinc boinc     15847 Dec 14 22:26 start_atlas.sh
[2025-12-15 13:52:05] -rw-r--r-- 2 boinc boinc    592595 Dec 14 22:26 input.tar.gz
[2025-12-15 13:52:05] -rw------- 1 boinc boinc 622164705 Dec 15 13:36 HITS.pool.root.1
[2025-12-15 13:52:05] -rw------- 1 boinc boinc   9431040 Dec 15 13:37 result.tar.gz
13:52:07 (780193): run_atlas exited; CPU time 216141.955224
13:52:07 (780193): called boinc_finish(0)

</stderr_txt>
]]>

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