Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:58:40 (2538040): wrapper (7.7.26015): starting
13:58:40 (2538040): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 13:58:40] Arguments: --nthreads 8
[2025-12-14 13:58:40] Threads: 8
[2025-12-14 13:58:40] Checking for CVMFS
[2025-12-14 13:58:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 13:58:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 13:58:40] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 13:58:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 13:58:41] 2.13.2.0 6573 59189 403324 154004 1 357 31657209 40960001 16692 16776704 0 155908533 99.572 175242066 38231 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 13:58:41] CVMFS is ok
[2025-12-14 13:58:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 13:58:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 13:58:41] Further information can be found at the LHC@home message board.
[2025-12-14 13:58:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 13:58:41] Checking for apptainer binary...
[2025-12-14 13:58:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 13:58:41] Running /usr/bin/apptainer --version
[2025-12-14 13:58:41] apptainer version 1.4.4-1.el9
[2025-12-14 13:58:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 13:58:41] c-206-35.aglt2.org
[2025-12-14 13:58:41] apptainer works
[2025-12-14 13:58:41] Set ATHENA_PROC_NUMBER=8
[2025-12-14 13:58:41] Set ATHENA_CORE_NUMBER=8
[2025-12-14 13:58:41] Starting ATLAS job with PandaID=6929437863
[2025-12-14 13:58:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 17:26:59]  *** The last 200 lines of the pilot log: ***
[2025-12-14 17:26:59] 2025-12-14 22:26:19,219 | INFO     | time since job start (12428s) is within the limit (174528.0s)
[2025-12-14 17:26:59] 2025-12-14 22:26:20,372 | INFO     | monitor loop #864: job 0:6929437863 is in state 'finished'
[2025-12-14 17:26:59] 2025-12-14 22:26:20,372 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 17:26:59] 2025-12-14 22:26:21,443 | INFO     | PID=2541973 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 17:26:59] 2025-12-14 22:26:21,443 | INFO     | .. there are 13 such processes running
[2025-12-14 17:26:59] 2025-12-14 22:26:22,445 | INFO     | time since job start (12431s) is within the limit (174528.0s)
[2025-12-14 17:26:59] 2025-12-14 22:26:22,909 | INFO     | monitor loop #865: job 0:6929437863 is in state 'finished'
[2025-12-14 17:26:59] 2025-12-14 22:26:22,909 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 17:26:59] 2025-12-14 22:26:24,421 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-14 17:26:59] 2025-12-14 22:26:24,438 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3204.810578125
[2025-12-14 17:26:59] 2025-12-14 22:26:24,475 | INFO     | time since job start (12433s) is within the limit (174528.0s)
[2025-12-14 17:26:59] 2025-12-14 22:26:24,494 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6929437863/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 17:26:59] 2025-12-14 22:26:24,495 | INFO     | extracted standard info from prmon json
[2025-12-14 17:26:59] 2025-12-14 22:26:24,495 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 17:26:59] 2025-12-14 22:26:24,495 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 17:26:59] 2025-12-14 22:26:24,495 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 17:26:59] 2025-12-14 22:26:24,495 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 17:26:59] 2025-12-14 22:26:24,516 | INFO     | fitting pss+swap vs Time
[2025-12-14 17:26:59] 2025-12-14 22:26:24,516 | INFO     | sum of square deviations: 2594180708.9556656
[2025-12-14 17:26:59] 2025-12-14 22:26:24,517 | INFO     | sum of deviations: 153449731425.55167
[2025-12-14 17:26:59] 2025-12-14 22:26:24,518 | INFO     | mean x: 1765744964.1576355
[2025-12-14 17:26:59] 2025-12-14 22:26:24,518 | INFO     | mean y: 2350861.4827586208
[2025-12-14 17:26:59] 2025-12-14 22:26:24,518 | INFO     | intersect: -104444147248.93091
[2025-12-14 17:26:59] 2025-12-14 22:26:24,518 | INFO     | chi2: 4.0618139632516135
[2025-12-14 17:26:59] 2025-12-14 22:26:24,518 | INFO     | sum of square deviations: 2407200916.3282757
[2025-12-14 17:26:59] 2025-12-14 22:26:24,542 | INFO     | sum of deviations: 161346691339.13138
[2025-12-14 17:26:59] 2025-12-14 22:26:24,542 | INFO     | mean x: 1765744811.661616
[2025-12-14 17:26:59] 2025-12-14 22:26:24,542 | INFO     | mean y: 2357094.4646464647
[2025-12-14 17:26:59] 2025-12-14 22:26:24,542 | INFO     | intersect: -118349659631.00064
[2025-12-14 17:26:59] 2025-12-14 22:26:24,542 | INFO     | chi2: 3.2979774857344575
[2025-12-14 17:26:59] 2025-12-14 22:26:24,542 | INFO     | current chi2=3.2979774857344575 (change=18.805304340075686 %)
[2025-12-14 17:26:59] 2025-12-14 22:26:24,543 | INFO     | right removable region: 197
[2025-12-14 17:26:59] 2025-12-14 22:26:24,543 | INFO     | sum of square deviations: 2407181396.3282757
[2025-12-14 17:26:59] 2025-12-14 22:26:24,544 | INFO     | sum of deviations: 107420514493.95955
[2025-12-14 17:26:59] 2025-12-14 22:26:24,544 | INFO     | mean x: 1765745116.661616
[2025-12-14 17:26:59] 2025-12-14 22:26:24,544 | INFO     | mean y: 2388261.626262626
[2025-12-14 17:26:59] 2025-12-14 22:26:24,544 | INFO     | intersect: -78794020345.67941
[2025-12-14 17:26:59] 2025-12-14 22:26:24,544 | INFO     | chi2: 2.086283016904098
[2025-12-14 17:26:59] 2025-12-14 22:26:24,559 | INFO     | current chi2=2.086283016904098 (change=48.63666736637143 %)
[2025-12-14 17:26:59] 2025-12-14 22:26:24,559 | INFO     | sum of square deviations: 2229391558.6942916
[2025-12-14 17:26:59] 2025-12-14 22:26:24,560 | INFO     | sum of deviations: 81221809860.2747
[2025-12-14 17:26:59] 2025-12-14 22:26:24,560 | INFO     | mean x: 1765745269.1658032
[2025-12-14 17:26:59] 2025-12-14 22:26:24,560 | INFO     | mean y: 2410656.647668394
[2025-12-14 17:26:59] 2025-12-14 22:26:24,560 | INFO     | intersect: -64327709350.5622
[2025-12-14 17:26:59] 2025-12-14 22:26:24,561 | INFO     | chi2: 1.6014956331067165
[2025-12-14 17:26:59] 2025-12-14 22:26:24,561 | INFO     | current chi2=1.6014956331067165 (change=23.236894509009282 %)
[2025-12-14 17:26:59] 2025-12-14 22:26:24,561 | INFO     | left removable region: 20
[2025-12-14 17:26:59] 2025-12-14 22:26:24,561 | INFO     | sum of square deviations: 1719666286.2146926
[2025-12-14 17:26:59] 2025-12-14 22:26:24,562 | INFO     | sum of deviations: 54928929832.20341
[2025-12-14 17:26:59] 2025-12-14 22:26:24,562 | INFO     | mean x: 1765745391.180791
[2025-12-14 17:26:59] 2025-12-14 22:26:24,562 | INFO     | mean y: 2452844.118644068
[2025-12-14 17:26:59] 2025-12-14 22:26:24,562 | INFO     | intersect: -56398318323.64116
[2025-12-14 17:26:59] 2025-12-14 22:26:24,588 | INFO     | chi2: 0.4917485731463657
[2025-12-14 17:26:59] 2025-12-14 22:26:24,588 | INFO     | current memory leak: 31.94 B/s (using 177 data points, chi2=0.49)
[2025-12-14 17:26:59] 2025-12-14 22:26:24,589 | INFO     | could have reported an average CPU frequency of 3248 MHz (10 samples)
[2025-12-14 17:26:59] 2025-12-14 22:26:24,589 | INFO     | ..............................
[2025-12-14 17:26:59] 2025-12-14 22:26:24,589 | INFO     | . Timing measurements:
[2025-12-14 17:26:59] 2025-12-14 22:26:24,589 | INFO     | . get job = 0 s
[2025-12-14 17:26:59] 2025-12-14 22:26:24,589 | INFO     | . initial setup = 6 s
[2025-12-14 17:26:59] 2025-12-14 22:26:24,589 | INFO     | . payload setup = 21 s
[2025-12-14 17:26:59] 2025-12-14 22:26:24,589 | INFO     | . stage-in = 0 s
[2025-12-14 17:26:59] 2025-12-14 22:26:24,589 | INFO     | . payload execution = 12373 s
[2025-12-14 17:26:59] 2025-12-14 22:26:24,589 | INFO     | . stage-out = 5 s
[2025-12-14 17:26:59] 2025-12-14 22:26:24,589 | INFO     | . log creation = 0 s
[2025-12-14 17:26:59] 2025-12-14 22:26:24,589 | INFO     | ..............................
[2025-12-14 17:26:59] 2025-12-14 22:26:25,284 | INFO     | 
[2025-12-14 17:26:59] 2025-12-14 22:26:25,284 | INFO     | job summary report
[2025-12-14 17:26:59] 2025-12-14 22:26:25,284 | INFO     | --------------------------------------------------
[2025-12-14 17:26:59] 2025-12-14 22:26:25,284 | INFO     | PanDA job id: 6929437863
[2025-12-14 17:26:59] 2025-12-14 22:26:25,284 | INFO     | task id: 47898763
[2025-12-14 17:26:59] 2025-12-14 22:26:25,284 | INFO     | errors: (none)
[2025-12-14 17:26:59] 2025-12-14 22:26:25,284 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 17:26:59] 2025-12-14 22:26:25,284 | INFO     | pilot state: finished 
[2025-12-14 17:26:59] 2025-12-14 22:26:25,284 | INFO     | transexitcode: 0
[2025-12-14 17:26:59] 2025-12-14 22:26:25,285 | INFO     | exeerrorcode: 0
[2025-12-14 17:26:59] 2025-12-14 22:26:25,285 | INFO     | exeerrordiag: 
[2025-12-14 17:26:59] 2025-12-14 22:26:25,285 | INFO     | exitcode: 0
[2025-12-14 17:26:59] 2025-12-14 22:26:25,285 | INFO     | exitmsg: OK
[2025-12-14 17:26:59] 2025-12-14 22:26:25,285 | INFO     | cpuconsumptiontime: 49136 s
[2025-12-14 17:26:59] 2025-12-14 22:26:25,285 | INFO     | nevents: 400
[2025-12-14 17:26:59] 2025-12-14 22:26:25,285 | INFO     | neventsw: 0
[2025-12-14 17:26:59] 2025-12-14 22:26:25,285 | INFO     | pid: 2550489
[2025-12-14 17:26:59] 2025-12-14 22:26:25,285 | INFO     | pgrp: 2550489
[2025-12-14 17:26:59] 2025-12-14 22:26:25,285 | INFO     | corecount: 8
[2025-12-14 17:26:59] 2025-12-14 22:26:25,285 | INFO     | event service: False
[2025-12-14 17:26:59] 2025-12-14 22:26:25,285 | INFO     | sizes: {0: 2283952, 9: 2284214, 11: 2284242, 12399: 2314306, 12400: 2314305, 12405: 2323543, 12413: 2323681}
[2025-12-14 17:26:59] 2025-12-14 22:26:25,285 | INFO     | --------------------------------------------------
[2025-12-14 17:26:59] 2025-12-14 22:26:25,285 | INFO     | 
[2025-12-14 17:26:59] 2025-12-14 22:26:25,286 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-14 17:26:59] 2025-12-14 22:26:25,464 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 17:26:59] 2025-12-14 22:26:25,464 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 17:26:59] 2025-12-14 22:26:25,464 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 17:26:59] 2025-12-14 22:26:25,464 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 17:26:59] 2025-12-14 22:26:25,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 17:26:59] 2025-12-14 22:26:25,465 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 17:26:59] 2025-12-14 22:26:25,465 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 17:26:59] 2025-12-14 22:26:25,465 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 17:26:59] 2025-12-14 22:26:25,465 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 17:26:59] 2025-12-14 22:26:25,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 17:26:59] 2025-12-14 22:26:25,465 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 17:26:59] 2025-12-14 22:26:25,465 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 17:26:59] 2025-12-14 22:26:25,465 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 17:26:59] 2025-12-14 22:26:25,465 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 17:26:59] 2025-12-14 22:26:25,465 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 17:26:59] 2025-12-14 22:26:25,465 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 17:26:59] 2025-12-14 22:26:25,465 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 17:26:59] 2025-12-14 22:26:25,465 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 17:26:59] 2025-12-14 22:26:25,466 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 17:26:59] 2025-12-14 22:26:25,466 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 17:26:59] 2025-12-14 22:26:25,466 | INFO     | job 6929437863 has completed (purged errors)
[2025-12-14 17:26:59] 2025-12-14 22:26:25,466 | INFO     | overall cleanup function is called
[2025-12-14 17:26:59] 2025-12-14 22:26:26,504 | INFO     | --- collectZombieJob: --- 10, [2550489]
[2025-12-14 17:26:59] 2025-12-14 22:26:26,504 | INFO     | zombie collector waiting for pid 2550489
[2025-12-14 17:26:59] 2025-12-14 22:26:26,504 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 17:26:59] 2025-12-14 22:26:26,504 | INFO     | collected zombie processes
[2025-12-14 17:26:59] 2025-12-14 22:26:26,504 | INFO     | will attempt to kill all subprocesses of pid=2550489
[2025-12-14 17:26:59] 2025-12-14 22:26:27,079 | INFO     | process IDs to be killed: [2550489] (in reverse order)
[2025-12-14 17:26:59] 2025-12-14 22:26:27,365 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 17:26:59] 2025-12-14 22:26:27,365 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 17:26:59] 2025-12-14 22:26:27,440 | INFO     | did not find any defunct processes belonging to 2550489
[2025-12-14 17:26:59] 2025-12-14 22:26:27,501 | INFO     | did not find any defunct processes belonging to 2550489
[2025-12-14 17:26:59] 2025-12-14 22:26:27,516 | INFO     | ready for new job
[2025-12-14 17:26:59] 2025-12-14 22:26:27,516 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 17:26:59] 2025-12-14 22:26:27,519 | INFO     | ***************************************
[2025-12-14 17:26:59] 2025-12-14 22:26:27,519 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 17:26:59] 2025-12-14 22:26:27,519 | INFO     | ***************************************
[2025-12-14 17:26:59] 2025-12-14 22:26:27,519 | INFO     | 
[2025-12-14 17:26:59] 2025-12-14 22:26:27,538 | INFO     | architecture information:
[2025-12-14 17:26:59] 2025-12-14 22:26:27,550 | INFO     | executing command: cat /etc/os-release
[2025-12-14 17:26:59] 2025-12-14 22:26:27,646 | INFO     | cat /etc/os-release:
[2025-12-14 17:26:59] NAME="CentOS Linux"
[2025-12-14 17:26:59] VERSION="7 (Core)"
[2025-12-14 17:26:59] ID="centos"
[2025-12-14 17:26:59] ID_LIKE="rhel fedora"
[2025-12-14 17:26:59] VERSION_ID="7"
[2025-12-14 17:26:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 17:26:59] ANSI_COLOR="0;31"
[2025-12-14 17:26:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 17:26:59] HOME_URL="https://www.centos.org/"
[2025-12-14 17:26:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 17:26:59] 
[2025-12-14 17:26:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 17:26:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 17:26:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 17:26:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 17:26:59] 
[2025-12-14 17:26:59] 2025-12-14 22:26:27,646 | INFO     | ***************************************
[2025-12-14 17:26:59] 2025-12-14 22:26:28,150 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-14 17:26:59] 2025-12-14 22:26:28,305 | INFO     | sufficient remaining disk space (85150662656 B)
[2025-12-14 17:26:59] 2025-12-14 22:26:28,305 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 17:26:59] 2025-12-14 22:26:28,305 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 17:26:59] 2025-12-14 22:26:28,305 | INFO     | update_server=False
[2025-12-14 17:26:59] 2025-12-14 22:26:28,306 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 17:26:59] 2025-12-14 22:26:28,315 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 17:26:59] 2025-12-14 22:26:28,315 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 17:26:59] 2025-12-14 22:26:28,487 | INFO     | all data control threads have been joined
[2025-12-14 17:26:59] 2025-12-14 22:26:28,814 | INFO     | all job control threads have been joined
[2025-12-14 17:26:59] 2025-12-14 22:26:28,974 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 17:26:59] 2025-12-14 22:26:28,974 | INFO     | aborting loop
[2025-12-14 17:26:59] 2025-12-14 22:26:29,312 | INFO     | [job] retrieve thread has finished
[2025-12-14 17:26:59] 2025-12-14 22:26:29,382 | INFO     | [data] copytool_in thread has finished
[2025-12-14 17:26:59] 2025-12-14 22:26:29,472 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 17:26:59] 2025-12-14 22:26:29,493 | INFO     | [data] control thread has finished
[2025-12-14 17:26:59] 2025-12-14 22:26:29,500 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 17:26:59] 2025-12-14 22:26:29,522 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 17:26:59] 2025-12-14 22:26:29,603 | INFO     | [payload] failed_post thread has finished
[2025-12-14 17:26:59] 2025-12-14 22:26:29,774 | INFO     | all payload control threads have been joined
[2025-12-14 17:26:59] 2025-12-14 22:26:29,820 | INFO     | [job] control thread has finished
[2025-12-14 17:26:59] 2025-12-14 22:26:29,990 | INFO     | [job] job monitor thread has finished
[2025-12-14 17:26:59] 2025-12-14 22:26:30,284 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 17:26:59] 2025-12-14 22:26:30,324 | INFO     | [data] copytool_out thread has finished
[2025-12-14 17:26:59] 2025-12-14 22:26:30,383 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 17:26:59] 2025-12-14 22:26:30,555 | INFO     | [payload] validate_post thread has finished
[2025-12-14 17:26:59] 2025-12-14 22:26:30,780 | INFO     | [payload] control thread has finished
[2025-12-14 17:26:59] 2025-12-14 22:26:30,787 | INFO     | [job] validate thread has finished
[2025-12-14 17:26:59] 2025-12-14 22:26:31,290 | INFO     | [job] queue monitor thread has finished
[2025-12-14 17:26:59] 2025-12-14 22:26:32,112 | INFO     | [monitor] cgroup control has ended
[2025-12-14 17:26:59] 2025-12-14 22:26:32,325 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 17:26:59] 2025-12-14 22:26:34,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140252700079936)>', '<ExcThread(monitor, started 140252173801216)>']
[2025-12-14 17:26:59] 2025-12-14 22:26:39,357 | INFO     | all workflow threads have been joined
[2025-12-14 17:26:59] 2025-12-14 22:26:39,357 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 17:26:59] 2025-12-14 22:26:39,357 | INFO     | traces error code: 0
[2025-12-14 17:26:59] 2025-12-14 22:26:39,357 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 17:26:59] 2025-12-14 22:26:58,268 | INFO     | PID=2541973 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 17:26:59] 2025-12-14 22:26:58,268 | INFO     | .. there are 13 such processes running
[2025-12-14 17:26:59] 2025-12-14 22:26:58,269 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 17:26:59] 2025-12-14 22:26:58,269 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 17:26:59] 2025-12-14 22:26:58,269 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 17:26:59] 2025-12-14 22:26:58,269 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 17:26:59] 2025-12-14 22:26:58,269 | INFO     | [monitor] control thread has ended
[2025-12-14 17:26:59] 2025-12-14 22:26:58,930 [wrapper] ==== pilot stdout END ====
[2025-12-14 17:26:59] 2025-12-14 22:26:58,956 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 17:26:59] 2025-12-14 22:26:58,959 [wrapper] pilotpid: 2541973
[2025-12-14 17:26:59] 2025-12-14 22:26:58,964 [wrapper] Pilot exit status: 0
[2025-12-14 17:26:59] 2025-12-14 22:26:58,988 [wrapper] pandaids: 6929437863
[2025-12-14 17:26:59] 2025-12-14 22:26:59,120 [wrapper] cleanup supervisor_pilot 3266113 2541974
[2025-12-14 17:26:59] 2025-12-14 22:26:59,123 [wrapper] Test setup, not cleaning
[2025-12-14 17:26:59] 2025-12-14 22:26:59,149 [wrapper] apfmon messages muted
[2025-12-14 17:26:59] 2025-12-14 22:26:59,154 [wrapper] ==== wrapper stdout END ====
[2025-12-14 17:26:59] 2025-12-14 22:26:59,197 [wrapper] ==== wrapper stderr END ====
[2025-12-14 17:26:59]  *** Error codes and diagnostics ***
[2025-12-14 17:26:59]     "exeErrorCode": 0,
[2025-12-14 17:26:59]     "exeErrorDiag": "",
[2025-12-14 17:26:59]     "pilotErrorCode": 0,
[2025-12-14 17:26:59]     "pilotErrorDiag": "",
[2025-12-14 17:26:59]  *** Listing of results directory ***
[2025-12-14 17:26:59] total 445840
[2025-12-14 17:26:59] -rw-r--r--. 1 boincer umatlas      5112 Dec 14 03:33 queuedata.json
[2025-12-14 17:26:59] -rw-r--r--. 1 boincer umatlas    579449 Dec 14 03:33 pilot3.tar.gz
[2025-12-14 17:26:59] -rwx------. 1 boincer umatlas     36322 Dec 14 03:33 runpilot2-wrapper.sh
[2025-12-14 17:26:59] -rw-r--r--. 1 boincer umatlas       100 Dec 14 13:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 17:26:59] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 14 13:58 run_atlas
[2025-12-14 17:26:59] -rw-r--r--. 1 boincer umatlas       105 Dec 14 13:58 job.xml
[2025-12-14 17:26:59] -rw-r--r--. 2 boincer umatlas 224795685 Dec 14 13:58 EVNT.47898761._000383.pool.root.1
[2025-12-14 17:26:59] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 13:58 start_atlas.sh
[2025-12-14 17:26:59] drwxrwx--x. 2 boincer umatlas      4096 Dec 14 13:58 shared
[2025-12-14 17:26:59] -rw-r--r--. 2 boincer umatlas    592391 Dec 14 13:58 input.tar.gz
[2025-12-14 17:26:59] -rw-r--r--. 1 boincer umatlas         0 Dec 14 13:58 boinc_lockfile
[2025-12-14 17:26:59] -rw-r--r--. 1 boincer umatlas      2504 Dec 14 13:58 pandaJob.out
[2025-12-14 17:26:59] -rw-------. 1 boincer umatlas        57 Dec 14 13:58 setup.sh.local
[2025-12-14 17:26:59] -rw-------. 1 boincer umatlas    991032 Dec 14 13:59 agis_schedconf.cvmfs.json
[2025-12-14 17:26:59] drwx------. 5 boincer umatlas      4096 Dec 14 13:59 pilot3
[2025-12-14 17:26:59] -rw-r--r--. 1 boincer umatlas      6903 Dec 14 17:20 init_data.xml
[2025-12-14 17:26:59] -rw-------. 1 boincer umatlas 223550950 Dec 14 17:24 HITS.47898763._009562.pool.root.1
[2025-12-14 17:26:59] -rw-r--r--. 1 boincer umatlas       530 Dec 14 17:24 boinc_task_state.xml
[2025-12-14 17:26:59] -rw-------. 1 boincer umatlas      1046 Dec 14 17:26 memory_monitor_summary.json
[2025-12-14 17:26:59] -rw-------. 1 boincer umatlas   1516240 Dec 14 17:26 agis_ddmendpoints.agis.ALL.json
[2025-12-14 17:26:59] -rw-------. 1 boincer umatlas    431976 Dec 14 17:26 log.47898763._009562.job.log.tgz.1
[2025-12-14 17:26:59] -rw-------. 1 boincer umatlas      7782 Dec 14 17:26 heartbeat.json
[2025-12-14 17:26:59] -rw-r--r--. 1 boincer umatlas        28 Dec 14 17:26 wrapper_checkpoint.txt
[2025-12-14 17:26:59] -rw-------. 1 boincer umatlas        95 Dec 14 17:26 pilot_heartbeat.json
[2025-12-14 17:26:59] -rw-------. 1 boincer umatlas       823 Dec 14 17:26 pilotlog.txt
[2025-12-14 17:26:59] -rw-r--r--. 1 boincer umatlas      8192 Dec 14 17:26 boinc_mmap_file
[2025-12-14 17:26:59] -rw-------. 1 boincer umatlas   1711142 Dec 14 17:26 log.47898763._009562.job.log.1
[2025-12-14 17:26:59] -rw-------. 1 boincer umatlas       357 Dec 14 17:26 output.list
[2025-12-14 17:26:59] -rw-r--r--. 1 boincer umatlas       620 Dec 14 17:26 runtime_log
[2025-12-14 17:26:59] -rw-------. 1 boincer umatlas   2160640 Dec 14 17:26 result.tar.gz
[2025-12-14 17:26:59] -rw-------. 1 boincer umatlas       656 Dec 14 17:26 WtBMDmGjwo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDwQKDmRXzMZm.diag
[2025-12-14 17:26:59] -rw-r--r--. 1 boincer umatlas      9343 Dec 14 17:26 runtime_log.err
[2025-12-14 17:26:59] -rw-r--r--. 1 boincer umatlas     16409 Dec 14 17:26 stderr.txt
[2025-12-14 17:26:59] HITS file was successfully produced:
[2025-12-14 17:26:59] -rw-------. 1 boincer umatlas 223550950 Dec 14 17:24 shared/HITS.pool.root.1
[2025-12-14 17:26:59]  *** Contents of shared directory: ***
[2025-12-14 17:26:59] total 440556
[2025-12-14 17:26:59] -rw-r--r--. 2 boincer umatlas 224795685 Dec 14 13:58 ATLAS.root_0
[2025-12-14 17:26:59] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 13:58 start_atlas.sh
[2025-12-14 17:26:59] -rw-r--r--. 2 boincer umatlas    592391 Dec 14 13:58 input.tar.gz
[2025-12-14 17:26:59] -rw-------. 1 boincer umatlas 223550950 Dec 14 17:24 HITS.pool.root.1
[2025-12-14 17:26:59] -rw-------. 1 boincer umatlas   2160640 Dec 14 17:26 result.tar.gz
17:27:21 (2538040): run_atlas exited; CPU time 49307.499732
17:27:21 (2538040): called boinc_finish(0)

</stderr_txt>
]]>

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