Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:30:33 (22972): wrapper (7.7.26015): starting
12:30:33 (22972): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 12:30:33] Arguments: --nthreads 8
[2025-12-14 12:30:33] Threads: 8
[2025-12-14 12:30:33] Checking for CVMFS
[2025-12-14 12:30:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 12:30:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 12:30:33] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 12:30:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 12:30:34] 2.11.2.0 3643 92106 132164 154003 1 59 17393089 18432000 1833 130560 0 57633020 99.980 3512443 29377 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 12:30:34] CVMFS is ok
[2025-12-14 12:30:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 12:30:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 12:30:34] Further information can be found at the LHC@home message board.
[2025-12-14 12:30:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 12:30:34] Checking for apptainer binary...
[2025-12-14 12:30:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 12:30:34] Running /usr/bin/apptainer --version
[2025-12-14 12:30:34] apptainer version 1.3.2-1.el7
[2025-12-14 12:30:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 12:30:34] c-206-15.aglt2.org
[2025-12-14 12:30:34] apptainer works
[2025-12-14 12:30:34] Set ATHENA_PROC_NUMBER=8
[2025-12-14 12:30:34] Set ATHENA_CORE_NUMBER=8
[2025-12-14 12:30:34] Starting ATLAS job with PandaID=6929435751
[2025-12-14 12:30:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 16:45:15]  *** The last 200 lines of the pilot log: ***
[2025-12-14 16:45:15] 2025-12-14 21:44:32,058 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-14 16:45:15] 2025-12-14 21:44:32,068 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2450.2083333333335
[2025-12-14 16:45:15] 2025-12-14 21:44:32,079 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6929435751/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 16:45:15] 2025-12-14 21:44:32,079 | INFO     | extracted standard info from prmon json
[2025-12-14 16:45:15] 2025-12-14 21:44:32,082 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 16:45:15] 2025-12-14 21:44:32,082 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 16:45:15] 2025-12-14 21:44:32,082 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 16:45:15] 2025-12-14 21:44:32,082 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 16:45:15] 2025-12-14 21:44:32,097 | INFO     | fitting pss+swap vs Time
[2025-12-14 16:45:15] 2025-12-14 21:44:32,097 | INFO     | sum of square deviations: 4844974562.5
[2025-12-14 16:45:15] 2025-12-14 21:44:32,098 | INFO     | sum of deviations: -25977872024.499992
[2025-12-14 16:45:15] 2025-12-14 21:44:32,098 | INFO     | mean x: 1765741065.5
[2025-12-14 16:45:15] 2025-12-14 21:44:32,099 | INFO     | mean y: 2504256.772
[2025-12-14 16:45:15] 2025-12-14 21:44:32,099 | INFO     | intersect: 9470086560.092558
[2025-12-14 16:45:15] 2025-12-14 21:44:32,099 | INFO     | chi2: 2.420581669814603
[2025-12-14 16:45:15] 2025-12-14 21:44:32,099 | INFO     | sum of square deviations: 4560048290.0
[2025-12-14 16:45:15] 2025-12-14 21:44:32,101 | INFO     | sum of deviations: -8341318791.000013
[2025-12-14 16:45:15] 2025-12-14 21:44:32,101 | INFO     | mean x: 1765740913.0
[2025-12-14 16:45:15] 2025-12-14 21:44:32,101 | INFO     | mean y: 2513548.3673469387
[2025-12-14 16:45:15] 2025-12-14 21:44:32,101 | INFO     | intersect: 3232437207.277639
[2025-12-14 16:45:15] 2025-12-14 21:44:32,101 | INFO     | chi2: 1.600028021770798
[2025-12-14 16:45:15] 2025-12-14 21:44:32,102 | INFO     | current chi2=1.600028021770798 (change=33.899027588135574 %)
[2025-12-14 16:45:15] 2025-12-14 21:44:32,102 | INFO     | sum of square deviations: 4286517580.0
[2025-12-14 16:45:15] 2025-12-14 21:44:32,104 | INFO     | sum of deviations: -8052232379.499994
[2025-12-14 16:45:15] 2025-12-14 21:44:32,104 | INFO     | mean x: 1765740760.5
[2025-12-14 16:45:15] 2025-12-14 21:44:32,105 | INFO     | mean y: 2513709.5708333333
[2025-12-14 16:45:15] 2025-12-14 21:44:32,105 | INFO     | intersect: 3319461478.9769354
[2025-12-14 16:45:15] 2025-12-14 21:44:32,105 | INFO     | chi2: 1.5997160818591454
[2025-12-14 16:45:15] 2025-12-14 21:44:32,106 | INFO     | current chi2=1.5997160818591454 (change=0.019495903034713605 %)
[2025-12-14 16:45:15] 2025-12-14 21:44:32,106 | INFO     | right removable region: 239
[2025-12-14 16:45:15] 2025-12-14 21:44:32,106 | INFO     | sum of square deviations: 4560048290.0
[2025-12-14 16:45:15] 2025-12-14 21:44:32,108 | INFO     | sum of deviations: -61518644143.0
[2025-12-14 16:45:15] 2025-12-14 21:44:32,109 | INFO     | mean x: 1765741218.0
[2025-12-14 16:45:15] 2025-12-14 21:44:32,109 | INFO     | mean y: 2523095.567346939
[2025-12-14 16:45:15] 2025-12-14 21:44:32,109 | INFO     | intersect: 23823763295.365627
[2025-12-14 16:45:15] 2025-12-14 21:44:32,109 | INFO     | chi2: 1.0747247003568772
[2025-12-14 16:45:15] 2025-12-14 21:44:32,110 | INFO     | current chi2=1.0747247003568772 (change=55.600560238928345 %)
[2025-12-14 16:45:15] 2025-12-14 21:44:32,110 | INFO     | sum of square deviations: 4286517580.0
[2025-12-14 16:45:15] 2025-12-14 21:44:32,112 | INFO     | sum of deviations: -65789474779.99999
[2025-12-14 16:45:15] 2025-12-14 21:44:32,113 | INFO     | mean x: 1765741370.5
[2025-12-14 16:45:15] 2025-12-14 21:44:32,113 | INFO     | mean y: 2525476.566666667
[2025-12-14 16:45:15] 2025-12-14 21:44:32,113 | INFO     | intersect: 27103125251.200596
[2025-12-14 16:45:15] 2025-12-14 21:44:32,113 | INFO     | chi2: 1.0440036155489514
[2025-12-14 16:45:15] 2025-12-14 21:44:32,114 | INFO     | current chi2=1.0440036155489514 (change=2.858507373816237 %)
[2025-12-14 16:45:15] 2025-12-14 21:44:32,114 | INFO     | left removable region: 20
[2025-12-14 16:45:15] 2025-12-14 21:44:32,114 | INFO     | sum of square deviations: 3256879670.0
[2025-12-14 16:45:15] 2025-12-14 21:44:32,116 | INFO     | sum of deviations: -34305249723.000008
[2025-12-14 16:45:15] 2025-12-14 21:44:32,116 | INFO     | mean x: 1765741340.0
[2025-12-14 16:45:15] 2025-12-14 21:44:32,116 | INFO     | mean y: 2528207.794520548
[2025-12-14 16:45:15] 2025-12-14 21:44:32,117 | INFO     | intersect: 18601372424.51213
[2025-12-14 16:45:15] 2025-12-14 21:44:32,117 | INFO     | chi2: 0.18300364958690657
[2025-12-14 16:45:15] 2025-12-14 21:44:32,117 | INFO     | current memory leak: -10.53 B/s (using 219 data points, chi2=0.18)
[2025-12-14 16:45:15] 2025-12-14 21:44:32,118 | INFO     | could have reported an average CPU frequency of 2557 MHz (12 samples)
[2025-12-14 16:45:15] 2025-12-14 21:44:32,118 | INFO     | ..............................
[2025-12-14 16:45:15] 2025-12-14 21:44:32,118 | INFO     | . Timing measurements:
[2025-12-14 16:45:15] 2025-12-14 21:44:32,118 | INFO     | . get job = 0 s
[2025-12-14 16:45:15] 2025-12-14 21:44:32,119 | INFO     | . initial setup = 2 s
[2025-12-14 16:45:15] 2025-12-14 21:44:32,119 | INFO     | . payload setup = 5 s
[2025-12-14 16:45:15] 2025-12-14 21:44:32,119 | INFO     | . stage-in = 0 s
[2025-12-14 16:45:15] 2025-12-14 21:44:32,119 | INFO     | . payload execution = 15195 s
[2025-12-14 16:45:15] 2025-12-14 21:44:32,119 | INFO     | . stage-out = 2 s
[2025-12-14 16:45:15] 2025-12-14 21:44:32,119 | INFO     | . log creation = 0 s
[2025-12-14 16:45:15] 2025-12-14 21:44:32,119 | INFO     | ..............................
[2025-12-14 16:45:15] 2025-12-14 21:44:32,489 | INFO     | 
[2025-12-14 16:45:15] 2025-12-14 21:44:32,489 | INFO     | job summary report
[2025-12-14 16:45:15] 2025-12-14 21:44:32,489 | INFO     | --------------------------------------------------
[2025-12-14 16:45:15] 2025-12-14 21:44:32,489 | INFO     | PanDA job id: 6929435751
[2025-12-14 16:45:15] 2025-12-14 21:44:32,490 | INFO     | task id: 47898763
[2025-12-14 16:45:15] 2025-12-14 21:44:32,490 | INFO     | errors: (none)
[2025-12-14 16:45:15] 2025-12-14 21:44:32,490 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 16:45:15] 2025-12-14 21:44:32,490 | INFO     | pilot state: finished 
[2025-12-14 16:45:15] 2025-12-14 21:44:32,490 | INFO     | transexitcode: 0
[2025-12-14 16:45:15] 2025-12-14 21:44:32,490 | INFO     | exeerrorcode: 0
[2025-12-14 16:45:15] 2025-12-14 21:44:32,491 | INFO     | exeerrordiag: 
[2025-12-14 16:45:15] 2025-12-14 21:44:32,491 | INFO     | exitcode: 0
[2025-12-14 16:45:15] 2025-12-14 21:44:32,491 | INFO     | exitmsg: OK
[2025-12-14 16:45:15] 2025-12-14 21:44:32,491 | INFO     | cpuconsumptiontime: 114498 s
[2025-12-14 16:45:15] 2025-12-14 21:44:32,491 | INFO     | nevents: 400
[2025-12-14 16:45:15] 2025-12-14 21:44:32,491 | INFO     | neventsw: 0
[2025-12-14 16:45:15] 2025-12-14 21:44:32,492 | INFO     | pid: 2845
[2025-12-14 16:45:15] 2025-12-14 21:44:32,492 | INFO     | pgrp: 2845
[2025-12-14 16:45:15] 2025-12-14 21:44:32,492 | INFO     | corecount: 8
[2025-12-14 16:45:15] 2025-12-14 21:44:32,492 | INFO     | event service: False
[2025-12-14 16:45:15] 2025-12-14 21:44:32,492 | INFO     | sizes: {0: 2283952, 1: 2283952, 4: 2284242, 11: 2284270, 15203: 2315395, 15206: 2324393, 15207: 2324577, 15211: 2324771}
[2025-12-14 16:45:15] 2025-12-14 21:44:32,492 | INFO     | --------------------------------------------------
[2025-12-14 16:45:15] 2025-12-14 21:44:32,493 | INFO     | 
[2025-12-14 16:45:15] 2025-12-14 21:44:32,493 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-14 16:45:15] 2025-12-14 21:44:32,513 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 16:45:15] 2025-12-14 21:44:32,514 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 16:45:15] 2025-12-14 21:44:32,514 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 16:45:15] 2025-12-14 21:44:32,514 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 16:45:15] 2025-12-14 21:44:32,514 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 16:45:15] 2025-12-14 21:44:32,515 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 16:45:15] 2025-12-14 21:44:32,515 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 16:45:15] 2025-12-14 21:44:32,515 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 16:45:15] 2025-12-14 21:44:32,515 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 16:45:15] 2025-12-14 21:44:32,515 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 16:45:15] 2025-12-14 21:44:32,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 16:45:15] 2025-12-14 21:44:32,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 16:45:15] 2025-12-14 21:44:32,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 16:45:15] 2025-12-14 21:44:32,516 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 16:45:15] 2025-12-14 21:44:32,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 16:45:15] 2025-12-14 21:44:32,516 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 16:45:15] 2025-12-14 21:44:32,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 16:45:15] 2025-12-14 21:44:32,517 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 16:45:15] 2025-12-14 21:44:32,517 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 16:45:15] 2025-12-14 21:44:32,517 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 16:45:15] 2025-12-14 21:44:32,517 | INFO     | job 6929435751 has completed (purged errors)
[2025-12-14 16:45:15] 2025-12-14 21:44:32,518 | INFO     | overall cleanup function is called
[2025-12-14 16:45:15] 2025-12-14 21:44:33,526 | INFO     | --- collectZombieJob: --- 10, [2845]
[2025-12-14 16:45:15] 2025-12-14 21:44:33,526 | INFO     | zombie collector waiting for pid 2845
[2025-12-14 16:45:15] 2025-12-14 21:44:33,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 16:45:15] 2025-12-14 21:44:33,526 | INFO     | collected zombie processes
[2025-12-14 16:45:15] 2025-12-14 21:44:33,526 | INFO     | will attempt to kill all subprocesses of pid=2845
[2025-12-14 16:45:15] 2025-12-14 21:44:33,663 | INFO     | process IDs to be killed: [2845] (in reverse order)
[2025-12-14 16:45:15] 2025-12-14 21:44:33,724 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 16:45:15] 2025-12-14 21:44:33,725 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 16:45:15] 2025-12-14 21:44:33,730 | INFO     | did not find any defunct processes belonging to 2845
[2025-12-14 16:45:15] 2025-12-14 21:44:33,735 | INFO     | did not find any defunct processes belonging to 2845
[2025-12-14 16:45:15] 2025-12-14 21:44:33,735 | INFO     | ready for new job
[2025-12-14 16:45:15] 2025-12-14 21:44:33,736 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 16:45:15] 2025-12-14 21:44:33,738 | INFO     | ***************************************
[2025-12-14 16:45:15] 2025-12-14 21:44:33,738 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 16:45:15] 2025-12-14 21:44:33,738 | INFO     | ***************************************
[2025-12-14 16:45:15] 2025-12-14 21:44:33,738 | INFO     | 
[2025-12-14 16:45:15] 2025-12-14 21:44:33,739 | INFO     | architecture information:
[2025-12-14 16:45:15] 2025-12-14 21:44:33,740 | INFO     | executing command: cat /etc/os-release
[2025-12-14 16:45:15] 2025-12-14 21:44:33,752 | INFO     | cat /etc/os-release:
[2025-12-14 16:45:15] NAME="CentOS Linux"
[2025-12-14 16:45:15] VERSION="7 (Core)"
[2025-12-14 16:45:15] ID="centos"
[2025-12-14 16:45:15] ID_LIKE="rhel fedora"
[2025-12-14 16:45:15] VERSION_ID="7"
[2025-12-14 16:45:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 16:45:15] ANSI_COLOR="0;31"
[2025-12-14 16:45:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 16:45:15] HOME_URL="https://www.centos.org/"
[2025-12-14 16:45:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 16:45:15] 
[2025-12-14 16:45:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 16:45:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 16:45:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 16:45:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 16:45:15] 
[2025-12-14 16:45:15] 2025-12-14 21:44:33,752 | INFO     | ***************************************
[2025-12-14 16:45:15] 2025-12-14 21:44:34,255 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-14 16:45:15] 2025-12-14 21:44:34,270 | INFO     | sufficient remaining disk space (28017950720 B)
[2025-12-14 16:45:15] 2025-12-14 21:44:34,270 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 16:45:15] 2025-12-14 21:44:34,270 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 16:45:15] 2025-12-14 21:44:34,270 | INFO     | update_server=False
[2025-12-14 16:45:15] 2025-12-14 21:44:34,271 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 16:45:15] 2025-12-14 21:44:34,271 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 16:45:15] 2025-12-14 21:44:34,388 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-14 16:45:15] 2025-12-14 21:44:34,388 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-14 16:45:15] 2025-12-14 21:44:34,388 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 16:45:15] 2025-12-14 21:44:34,388 | INFO     | will abort loop
[2025-12-14 16:45:15] 2025-12-14 21:44:34,615 | INFO     | all payload control threads have been joined
[2025-12-14 16:45:15] 2025-12-14 21:44:34,868 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 16:45:15] 2025-12-14 21:44:35,164 | INFO     | all data control threads have been joined
[2025-12-14 16:45:15] 2025-12-14 21:44:35,272 | INFO     | [job] retrieve thread has finished
[2025-12-14 16:45:15] 2025-12-14 21:44:35,394 | INFO     | [job] job monitor thread has finished
[2025-12-14 16:45:15] 2025-12-14 21:44:35,620 | INFO     | [payload] control thread has finished
[2025-12-14 16:45:15] 2025-12-14 21:44:35,649 | INFO     | all job control threads have been joined
[2025-12-14 16:45:15] 2025-12-14 21:44:35,653 | INFO     | [job] validate thread has finished
[2025-12-14 16:45:15] 2025-12-14 21:44:35,654 | INFO     | [data] copytool_in thread has finished
[2025-12-14 16:45:15] 2025-12-14 21:44:35,758 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 16:45:15] 2025-12-14 21:44:35,902 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 16:45:15] 2025-12-14 21:44:35,993 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 16:45:15] 2025-12-14 21:44:36,010 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 16:45:15] 2025-12-14 21:44:36,171 | INFO     | [data] control thread has finished
[2025-12-14 16:45:15] 2025-12-14 21:44:36,604 | INFO     | [payload] validate_post thread has finished
[2025-12-14 16:45:15] 2025-12-14 21:44:36,655 | INFO     | [job] control thread has finished
[2025-12-14 16:45:15] 2025-12-14 21:44:36,674 | INFO     | [payload] failed_post thread has finished
[2025-12-14 16:45:15] 2025-12-14 21:44:36,874 | INFO     | [data] copytool_out thread has finished
[2025-12-14 16:45:15] 2025-12-14 21:44:37,266 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 16:45:15] 2025-12-14 21:44:38,271 | INFO     | [job] queue monitor thread has finished
[2025-12-14 16:45:15] 2025-12-14 21:44:38,277 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 16:45:15] 2025-12-14 21:45:03,803 | INFO     | PID=26660 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 16:45:15] 2025-12-14 21:45:03,803 | INFO     | .. there are 3 such processes running
[2025-12-14 16:45:15] 2025-12-14 21:45:03,804 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 16:45:15] 2025-12-14 21:45:03,804 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 16:45:15] 2025-12-14 21:45:03,805 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 16:45:15] 2025-12-14 21:45:09,630 | INFO     | [monitor] cgroup control has ended
[2025-12-14 16:45:15] 2025-12-14 21:45:10,517 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140370629355328)>', '<ExcThread(monitor, started 140370025359104)>']
[2025-12-14 16:45:15] 2025-12-14 21:45:10,836 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 16:45:15] 2025-12-14 21:45:10,836 | INFO     | [monitor] control thread has ended
[2025-12-14 16:45:15] 2025-12-14 21:45:15,543 | INFO     | all workflow threads have been joined
[2025-12-14 16:45:15] 2025-12-14 21:45:15,543 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 16:45:15] 2025-12-14 21:45:15,544 | INFO     | traces error code: 0
[2025-12-14 16:45:15] 2025-12-14 21:45:15,544 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 16:45:15] 2025-12-14 21:45:15,670 [wrapper] ==== pilot stdout END ====
[2025-12-14 16:45:15] 2025-12-14 21:45:15,673 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 16:45:15] 2025-12-14 21:45:15,674 [wrapper] pilotpid: 26660
[2025-12-14 16:45:15] 2025-12-14 21:45:15,676 [wrapper] Pilot exit status: 0
[2025-12-14 16:45:15] 2025-12-14 21:45:15,685 [wrapper] pandaids: 6929435751
[2025-12-14 16:45:15] 2025-12-14 21:45:15,711 [wrapper] cleanup supervisor_pilot 21659 26661
[2025-12-14 16:45:15] 2025-12-14 21:45:15,714 [wrapper] Test setup, not cleaning
[2025-12-14 16:45:15] 2025-12-14 21:45:15,716 [wrapper] apfmon messages muted
[2025-12-14 16:45:15] 2025-12-14 21:45:15,718 [wrapper] ==== wrapper stdout END ====
[2025-12-14 16:45:15] 2025-12-14 21:45:15,720 [wrapper] ==== wrapper stderr END ====
[2025-12-14 16:45:15]  *** Error codes and diagnostics ***
[2025-12-14 16:45:15]     "exeErrorCode": 0,
[2025-12-14 16:45:15]     "exeErrorDiag": "",
[2025-12-14 16:45:15]     "pilotErrorCode": 0,
[2025-12-14 16:45:15]     "pilotErrorDiag": "",
[2025-12-14 16:45:15]  *** Listing of results directory ***
[2025-12-14 16:45:15] total 440396
[2025-12-14 16:45:15] -rwx------ 1 boincer umatlas     36322 Dec 14 02:47 runpilot2-wrapper.sh
[2025-12-14 16:45:15] -rw-r--r-- 1 boincer umatlas      5112 Dec 14 02:47 queuedata.json
[2025-12-14 16:45:15] -rw-r--r-- 1 boincer umatlas    579449 Dec 14 02:47 pilot3.tar.gz
[2025-12-14 16:45:15] -rw-r--r-- 1 boincer umatlas       100 Dec 14 12:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 16:45:15] -rwxr-xr-x 1 boincer umatlas      7986 Dec 14 12:30 run_atlas
[2025-12-14 16:45:15] -rw-r--r-- 1 boincer umatlas       105 Dec 14 12:30 job.xml
[2025-12-14 16:45:15] -rw-r--r-- 2 boincer umatlas 225566271 Dec 14 12:30 EVNT.47898761._000327.pool.root.1
[2025-12-14 16:45:15] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 12:30 start_atlas.sh
[2025-12-14 16:45:15] drwxrwx--x 2 boincer umatlas      4096 Dec 14 12:30 shared
[2025-12-14 16:45:15] -rw-r--r-- 2 boincer umatlas    592387 Dec 14 12:30 input.tar.gz
[2025-12-14 16:45:15] -rw-r--r-- 1 boincer umatlas         0 Dec 14 12:30 boinc_lockfile
[2025-12-14 16:45:15] -rw-r--r-- 1 boincer umatlas      2504 Dec 14 12:30 pandaJob.out
[2025-12-14 16:45:15] -rw------- 1 boincer umatlas        57 Dec 14 12:30 setup.sh.local
[2025-12-14 16:45:15] -rw------- 1 boincer umatlas    991024 Dec 14 12:30 agis_schedconf.cvmfs.json
[2025-12-14 16:45:15] drwx------ 5 boincer umatlas      4096 Dec 14 12:30 pilot3
[2025-12-14 16:45:15] -rw-r--r-- 1 boincer umatlas      5952 Dec 14 16:37 init_data.xml
[2025-12-14 16:45:15] -rw------- 1 boincer umatlas 216284627 Dec 14 16:43 HITS.47898763._008163.pool.root.1
[2025-12-14 16:45:15] -rw-r--r-- 1 boincer umatlas       531 Dec 14 16:43 boinc_task_state.xml
[2025-12-14 16:45:15] -rw------- 1 boincer umatlas      1055 Dec 14 16:44 memory_monitor_summary.json
[2025-12-14 16:45:15] -rw------- 1 boincer umatlas   1516240 Dec 14 16:44 agis_ddmendpoints.agis.ALL.json
[2025-12-14 16:45:15] -rw------- 1 boincer umatlas    476091 Dec 14 16:44 log.47898763._008163.job.log.tgz.1
[2025-12-14 16:45:15] -rw------- 1 boincer umatlas      7856 Dec 14 16:44 heartbeat.json
[2025-12-14 16:45:15] -rw-r--r-- 1 boincer umatlas        29 Dec 14 16:45 wrapper_checkpoint.txt
[2025-12-14 16:45:15] -rw-r--r-- 1 boincer umatlas      8192 Dec 14 16:45 boinc_mmap_file
[2025-12-14 16:45:15] -rw------- 1 boincer umatlas        95 Dec 14 16:45 pilot_heartbeat.json
[2025-12-14 16:45:15] -rw------- 1 boincer umatlas      5007 Dec 14 16:45 pilotlog.txt
[2025-12-14 16:45:15] -rw------- 1 boincer umatlas   2121869 Dec 14 16:45 log.47898763._008163.job.log.1
[2025-12-14 16:45:15] -rw------- 1 boincer umatlas       357 Dec 14 16:45 output.list
[2025-12-14 16:45:15] -rw-r--r-- 1 boincer umatlas       620 Dec 14 16:45 runtime_log
[2025-12-14 16:45:15] -rw------- 1 boincer umatlas   2621440 Dec 14 16:45 result.tar.gz
[2025-12-14 16:45:15] -rw-r--r-- 1 boincer umatlas      9343 Dec 14 16:45 runtime_log.err
[2025-12-14 16:45:15] -rw------- 1 boincer umatlas       663 Dec 14 16:45 pmDNDm1zvo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmumQKDmh4351m.diag
[2025-12-14 16:45:15] -rw-r--r-- 1 boincer umatlas     21058 Dec 14 16:45 stderr.txt
[2025-12-14 16:45:15] HITS file was successfully produced:
[2025-12-14 16:45:15] -rw------- 1 boincer umatlas 216284627 Dec 14 16:43 shared/HITS.pool.root.1
[2025-12-14 16:45:15]  *** Contents of shared directory: ***
[2025-12-14 16:45:15] total 434656
[2025-12-14 16:45:15] -rw-r--r-- 2 boincer umatlas 225566271 Dec 14 12:30 ATLAS.root_0
[2025-12-14 16:45:15] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 12:30 start_atlas.sh
[2025-12-14 16:45:15] -rw-r--r-- 2 boincer umatlas    592387 Dec 14 12:30 input.tar.gz
[2025-12-14 16:45:15] -rw------- 1 boincer umatlas 216284627 Dec 14 16:43 HITS.pool.root.1
[2025-12-14 16:45:15] -rw------- 1 boincer umatlas   2621440 Dec 14 16:45 result.tar.gz
16:45:17 (22972): run_atlas exited; CPU time 114701.488934
16:45:17 (22972): called boinc_finish(0)

</stderr_txt>
]]>

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