Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-14 22:52:51 (8280): vboxwrapper version 26210
2025-12-14 22:52:51 (8280): BOINC client version: 8.2.8
2025-12-14 22:52:52 (8280): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-12-14 22:52:52 (8280): Successfully copied 'init_data.xml' to the shared directory.
2025-12-14 22:52:52 (8280): Create VM. (boinc_3909e9a7680539f8, slot#3)
2025-12-14 22:52:53 (8280): Setting Memory Size for VM. (4000MB)
2025-12-14 22:52:53 (8280): Setting CPU Count for VM. (4)
2025-12-14 22:52:53 (8280): Setting Chipset Options for VM.
2025-12-14 22:52:53 (8280): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-14 22:52:54 (8280): Setting Boot Options for VM.
2025-12-14 22:52:54 (8280): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-14 22:52:54 (8280): Enabling VM Network Access.
2025-12-14 22:52:55 (8280): Disabling USB Support for VM.
2025-12-14 22:52:55 (8280): Disabling COM Port Support for VM.
2025-12-14 22:52:55 (8280): Disabling LPT Port Support for VM.
2025-12-14 22:52:55 (8280): Disabling Audio Support for VM.
2025-12-14 22:52:56 (8280): Disabling Clipboard Support for VM.
2025-12-14 22:52:56 (8280): Disabling Drag and Drop Support for VM.
2025-12-14 22:52:56 (8280): Adding storage controller(s) to VM.
2025-12-14 22:52:56 (8280): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-14 22:52:57 (8280): Adding VirtualBox Guest Additions to VM.
2025-12-14 22:52:57 (8280): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-14 22:52:57 (8280): forwarding host port 53460 to guest port 80
2025-12-14 22:52:58 (8280): Enabling remote desktop for VM.
2025-12-14 22:52:58 (8280): Required extension pack not installed, remote desktop not enabled.
2025-12-14 22:52:58 (8280): Enabling shared directory for VM.
2025-12-14 22:52:58 (8280): Starting VM using VBoxManage interface. (boinc_3909e9a7680539f8, slot#3)
2025-12-14 22:53:02 (8280): Successfully started VM. (PID = '30204')
2025-12-14 22:53:02 (8280): Reporting VM Process ID to BOINC.
2025-12-14 22:53:02 (8280): Guest Log: BIOS: VirtualBox 7.0.6
2025-12-14 22:53:02 (8280): Guest Log: CPUID EDX: 0x178bfbff
2025-12-14 22:53:02 (8280): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-14 22:53:02 (8280): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-14 22:53:02 (8280): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-14 22:53:02 (8280): Detected: Web Application Enabled (http://localhost:53460)
2025-12-14 22:53:02 (8280): Preference change detected
2025-12-14 22:53:02 (8280): Setting CPU throttle for VM. (100%)
2025-12-14 22:53:03 (8280): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-14 22:53:04 (8280): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-14 22:53:04 (8280): Guest Log: BIOS: Booting from Hard Disk...
2025-12-14 22:53:06 (8280): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-14 22:53:06 (8280): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-14 22:53:06 (8280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-14 22:53:13 (8280): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-14 22:53:13 (8280): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-12-14 22:53:16 (8280): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-14 22:53:16 (8280): Guest Log: 00:00:00.000066 main     Log opened 2025-12-14T22:53:14.643950000Z
2025-12-14 22:53:16 (8280): Guest Log: 00:00:00.000150 main     OS Product: Linux
2025-12-14 22:53:16 (8280): Guest Log: 00:00:00.000162 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-14 22:53:16 (8280): Guest Log: 00:00:00.000172 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-14 22:53:16 (8280): Guest Log: 00:00:00.000182 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-14 22:53:16 (8280): Guest Log: 00:00:00.000183 main     Process ID: 1292
2025-12-14 22:53:16 (8280): Guest Log: 00:00:00.000183 main     Package type: LINUX_64BITS_GENERIC
2025-12-14 22:53:16 (8280): Guest Log: 00:00:00.000653 main     5.2.32 r132073 started. Verbose level = 0
2025-12-14 22:53:16 (8280): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-14 22:53:16 (8280): Guest Log: [INFO] Mounting shared directory
2025-12-14 22:53:16 (8280): Guest Log: [INFO] Checking for init_data.xml
2025-12-14 22:53:26 (8280): Guest Log: 00:00:10.010742 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 620 673 000ns (GuestNow=1 765 774 406 265 991 000 ns GuestLast=1 765 752 794 645 318 000 ns fSetTimeLastLoop=true )
2025-12-14 22:53:28 (8280): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-14 22:53:28 (8280): Guest Log: [INFO] Detected branch: prod
2025-12-14 22:53:28 (8280): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-14 22:53:28 (8280): Guest Log: Copying input files
2025-12-14 22:53:29 (8280): Guest Log: Copied input files into RunAtlas.
2025-12-14 22:53:29 (8280): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-12-14 22:53:29 (8280): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-12-14 22:53:29 (8280): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-12-14 22:53:29 (8280): Guest Log: Further information can be found at the LHC@home message board.
2025-12-14 22:53:41 (8280): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-14 22:53:42 (8280): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-14 22:53:42 (8280): Guest Log: 2.6.3.0 1573 0 30160 154019 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-12-14 22:53:43 (8280): Guest Log: copied the webapp to /var/www
2025-12-14 22:53:43 (8280): Guest Log: ATHENA_PROC_NUMBER=4
2025-12-14 22:53:43 (8280): Guest Log: ATHENA_CORE_NUMBER=4
2025-12-14 22:53:44 (8280): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-14 22:53:44 (8280): Guest Log:  *** Starting ATLAS job. (PandaID=6929435755 taskID=47898763) ***
2025-12-15 00:33:05 (8280): Status Report: Elapsed Time: '6000.000000'
2025-12-15 00:33:05 (8280): Status Report: CPU Time: '16270.546875'
2025-12-15 01:58:42 (8280): Guest Log:  *** Job finished ***
2025-12-15 01:58:42 (8280): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-15 01:58:42 (8280): Guest Log: 2025-12-15 08:01:38,686 | INFO     | job.realtimelogging is not enabled
2025-12-15 01:58:42 (8280): Guest Log: 2025-12-15 08:01:39,689 | INFO     | [payload] run_realtimelog thread has finished
2025-12-15 01:58:42 (8280): Guest Log: 2025-12-15 08:02:05,590 | INFO     | [monitor] cgroup control has ended
2025-12-15 01:58:42 (8280): Guest Log: 2025-12-15 08:02:05,617 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140099690600256)>', '<ExcThread(monitor, started 140098762938112)>']
2025-12-15 01:58:42 (8280): Guest Log: 2025-12-15 08:02:06,351 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-15 01:58:42 (8280): Guest Log: 2025-12-15 08:02:06,351 | INFO     | [monitor] control thread has ended
2025-12-15 01:58:42 (8280): Guest Log: 2025-12-15 08:02:10,629 | INFO     | all workflow threads have been joined
2025-12-15 01:58:42 (8280): Guest Log: 2025-12-15 08:02:10,629 | INFO     | end of generic workflow (traces error code: 0)
2025-12-15 01:58:42 (8280): Guest Log: 2025-12-15 08:02:10,630 | INFO     | traces error code: 0
2025-12-15 01:58:42 (8280): Guest Log: 2025-12-15 08:02:10,630 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-15 01:58:42 (8280): Guest Log: 2025-12-15 08:02:10,744 [wrapper] ==== pilot stdout END ====
2025-12-15 01:58:42 (8280): Guest Log: 2025-12-15 08:02:10,747 [wrapper] ==== wrapper stdout RESUME ====
2025-12-15 01:58:42 (8280): Guest Log: 2025-12-15 08:02:10,750 [wrapper] pilotpid: 6448
2025-12-15 01:58:42 (8280): Guest Log: 2025-12-15 08:02:10,754 [wrapper] Pilot exit status: 0
2025-12-15 01:58:42 (8280): Guest Log: 2025-12-15 08:02:12,998 [wrapper] pandaids: 6929435755
2025-12-15 01:58:42 (8280): Guest Log: 2025-12-15 08:02:13,020 [wrapper] cleanup supervisor_pilot  9156 6449
2025-12-15 01:58:42 (8280): Guest Log: 2025-12-15 08:02:13,023 [wrapper] Test setup, not cleaning
2025-12-15 01:58:42 (8280): Guest Log: 2025-12-15 08:02:13,026 [wrapper] apfmon messages muted
2025-12-15 01:58:42 (8280): Guest Log: 2025-12-15 08:02:13,029 [wrapper] ==== wrapper stdout END ====
2025-12-15 01:58:42 (8280): Guest Log: 2025-12-15 08:02:13,032 [wrapper] ==== wrapper stderr END ====
2025-12-15 01:58:42 (8280): Guest Log:  *** Error codes and diagnostics ***
2025-12-15 01:58:42 (8280): Guest Log:     "exeErrorCode": 0,
2025-12-15 01:58:42 (8280): Guest Log:     "exeErrorDiag": "",
2025-12-15 01:58:42 (8280): Guest Log:     "pilotErrorCode": 0,
2025-12-15 01:58:42 (8280): Guest Log:     "pilotErrorDiag": "",
2025-12-15 01:58:42 (8280): Guest Log:  *** Listing of results directory ***
2025-12-15 01:58:42 (8280): Guest Log: total 223928
2025-12-15 01:58:42 (8280): Guest Log: -rwx------. 1 atlas atlas     36322 Dec 14 07:47 runpilot2-wrapper.sh
2025-12-15 01:58:42 (8280): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Dec 14 07:47 queuedata.json
2025-12-15 01:58:42 (8280): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Dec 14 07:47 pilot3.tar.gz
2025-12-15 01:58:42 (8280): Guest Log: -rwxr-xr-x. 1 atlas atlas      8717 Dec 15 04:53 init_data.xml
2025-12-15 01:58:42 (8280): Guest Log: -rwxr-xr-x. 1 atlas atlas    592390 Dec 15 04:53 input.tar.gz
2025-12-15 01:58:42 (8280): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Dec 15 04:53 start_atlas.sh
2025-12-15 01:58:42 (8280): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec 15 04:53 EVNT.47898761._000327.pool.root.1 -> /data/./ATLAS.root_0
2025-12-15 01:58:42 (8280): Guest Log: -rw-r--r--. 1 atlas atlas      2504 Dec 15 04:53 pandaJob.out
2025-12-15 01:58:42 (8280): Guest Log: -rw-------. 1 atlas atlas   1516240 Dec 15 05:11 agis_ddmendpoints.agis.ALL.json
2025-12-15 01:58:42 (8280): Guest Log: -rw-------. 1 atlas atlas    991016 Dec 15 05:12 agis_schedconf.cvmfs.json
2025-12-15 01:58:42 (8280): Guest Log: drwx------. 5 atlas atlas      4096 Dec 15 05:12 pilot3
2025-12-15 01:58:42 (8280): Guest Log: -rw-------. 1 atlas atlas 222096391 Dec 15 08:00 HITS.47898763._008167.pool.root.1
2025-12-15 01:58:42 (8280): Guest Log: -rw-------. 1 atlas atlas      1026 Dec 15 08:01 memory_monitor_summary.json
2025-12-15 01:58:42 (8280): Guest Log: -rw-------. 1 atlas atlas    339025 Dec 15 08:01 log.47898763._008167.job.log.tgz.1
2025-12-15 01:58:42 (8280): Guest Log: -rw-------. 1 atlas atlas        96 Dec 15 08:01 pilot_heartbeat.json
2025-12-15 01:58:42 (8280): Guest Log: -rw-------. 1 atlas atlas      7787 Dec 15 08:01 heartbeat.json
2025-12-15 01:58:42 (8280): Guest Log: -rw-------. 1 atlas atlas      4684 Dec 15 08:02 pilotlog.txt
2025-12-15 01:58:42 (8280): Guest Log: -rw-------. 1 atlas atlas   1345131 Dec 15 08:02 log.47898763._008167.job.log.1
2025-12-15 01:58:42 (8280): Guest Log: -rw-------. 1 atlas atlas       357 Dec 15 08:02 output.list
2025-12-15 01:58:42 (8280): Guest Log: -rw-r--r--. 1 atlas atlas       620 Dec 15 08:02 runtime_log
2025-12-15 01:58:42 (8280): Guest Log: -rw-------. 1 atlas atlas   1699840 Dec 15 08:02 result.tar.gz
2025-12-15 01:58:42 (8280): Guest Log: -rw-------. 1 atlas atlas       667 Dec 15 08:02 wEGNDm1zvo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwmQKDm4VBgMm.diag
2025-12-15 01:58:42 (8280): Guest Log: -rw-r--r--. 1 atlas atlas      8783 Dec 15 08:02 runtime_log.err
2025-12-15 01:58:42 (8280): Guest Log: Looking for outputfile HITS.47898763._008167.pool.root.1
2025-12-15 01:58:42 (8280): Guest Log: HITS file was successfully produced
2025-12-15 01:58:42 (8280): Guest Log: -rw-------. 1 atlas atlas 222096391 Dec 15 08:00 /home/atlas/RunAtlas/HITS.47898763._008167.pool.root.1
2025-12-15 01:58:43 (8280): Guest Log: Successfully finished the ATLAS job!
2025-12-15 01:58:43 (8280): Guest Log: Copying the results back to the shared directory!
2025-12-15 01:58:43 (8280): Guest Log:  *** Contents of shared directory: ***
2025-12-15 01:58:43 (8280): Guest Log: total 439440
2025-12-15 01:58:43 (8280): Guest Log: -rwxrwxrwx. 1 root root 225566271 Dec 15 04:52 ATLAS.root_0
2025-12-15 01:58:43 (8280): Guest Log: -rwxrwxrwx. 1 root root 222096391 Dec 15 07:58 HITS.pool.root.1
2025-12-15 01:58:43 (8280): Guest Log: -rwxrwxrwx. 1 root root      8717 Dec 15 04:52 init_data.xml
2025-12-15 01:58:43 (8280): Guest Log: -rwxrwxrwx. 1 root root    592390 Dec 14 17:39 input.tar.gz
2025-12-15 01:58:43 (8280): Guest Log: -rwxrwxrwx. 1 root root   1699840 Dec 15 07:58 result.tar.gz
2025-12-15 01:58:43 (8280): Guest Log: -rwxrwxrwx. 1 root root     15847 Dec 14 17:39 start_atlas.sh
2025-12-15 01:58:43 (8280): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-15 01:58:43 (8280): VM Completion File Detected.
2025-12-15 01:58:43 (8280): Powering off VM.
2025-12-15 01:58:43 (8280): Successfully stopped VM.
2025-12-15 01:58:43 (8280): Deregistering VM. (boinc_3909e9a7680539f8, slot#3)
2025-12-15 01:58:43 (8280): Removing network bandwidth throttle group from VM.
2025-12-15 01:58:43 (8280): Removing VM from VirtualBox.
2025-12-15 01:58:49 (8280): called boinc_finish(0)

</stderr_txt>
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