Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:51:30 (2100240): wrapper (7.7.26015): starting
18:51:30 (2100240): wrapper: running run_atlas (--nthreads 4)
[2025-12-14 18:51:30] Arguments: --nthreads 4
[2025-12-14 18:51:30] Threads: 4
[2025-12-14 18:51:30] Checking for CVMFS
[2025-12-14 18:51:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 18:51:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 18:51:30] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 18:51:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 18:51:30] 2.9.2.0 1875135 64 66720 154003 3 186 19273587 36864000 0 130560 0 596693 99.999 1420 217 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-14 18:51:30] CVMFS is ok
[2025-12-14 18:51:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 18:51:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 18:51:30] Further information can be found at the LHC@home message board.
[2025-12-14 18:51:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 18:51:30] Checking for apptainer binary...
[2025-12-14 18:51:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 18:51:30] Running /usr/bin/apptainer --version
[2025-12-14 18:51:30] apptainer version 1.4.1-1.1
[2025-12-14 18:51:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 18:51:31] thA325
[2025-12-14 18:51:31] apptainer works
[2025-12-14 18:51:31] Set ATHENA_PROC_NUMBER=4
[2025-12-14 18:51:31] Set ATHENA_CORE_NUMBER=4
[2025-12-14 18:51:31] Starting ATLAS job with PandaID=6929435586
[2025-12-14 18:51:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 18:55:45]  *** The last 200 lines of the pilot log: ***
[2025-12-14 18:55:45] 2025-12-14 17:54:51,840 | INFO     | [job] retrieve thread has finished
[2025-12-14 18:55:45] 2025-12-14 17:54:51,840 | INFO     | [job] queue monitor thread has finished
[2025-12-14 18:55:45] 2025-12-14 17:54:51,896 | INFO     | [data] copytool_in thread has finished
[2025-12-14 18:55:45] 2025-12-14 17:54:51,930 | INFO     | all payload control threads have been joined
[2025-12-14 18:55:45] 2025-12-14 17:54:52,120 | INFO     | all job control threads have been joined
[2025-12-14 18:55:45] 2025-12-14 17:54:52,178 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 18:55:45] 2025-12-14 17:54:52,332 | INFO     | [data] control thread has finished
[2025-12-14 18:55:45] 2025-12-14 17:54:52,349 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 18:55:45] 2025-12-14 17:54:52,422 | INFO     | [payload] validate_post thread has finished
[2025-12-14 18:55:45] 2025-12-14 17:54:52,705 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 18:55:45] 2025-12-14 17:54:52,935 | INFO     | [payload] control thread has finished
[2025-12-14 18:55:45] 2025-12-14 17:54:53,004 | INFO     | [job] validate thread has finished
[2025-12-14 18:55:45] 2025-12-14 17:54:53,104 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 18:55:45] 2025-12-14 17:54:53,126 | INFO     | [job] control thread has finished
[2025-12-14 18:55:45] 2025-12-14 17:54:53,169 | INFO     | [payload] failed_post thread has finished
[2025-12-14 18:55:45] 2025-12-14 17:54:53,186 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 18:55:45] 2025-12-14 17:54:53,403 | INFO     | [data] copytool_out thread has finished
[2025-12-14 18:55:45] 2025-12-14 17:54:56,184 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 18:55:45] 2025-12-14 17:55:39,306 | INFO     | [monitor] cgroup control has ended
[2025-12-14 18:55:45] 2025-12-14 17:55:40,203 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139865741080384)>', '<ExcThread(monitor, started 139864729184000)>']
[2025-12-14 18:55:45] 2025-12-14 17:55:41,092 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 18:55:45] 2025-12-14 17:55:41,092 | INFO     | [monitor] control thread has ended
[2025-12-14 18:55:45] 2025-12-14 17:55:45,228 | INFO     | all workflow threads have been joined
[2025-12-14 18:55:45] 2025-12-14 17:55:45,228 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 18:55:45] 2025-12-14 17:55:45,228 | INFO     | traces error code: 0
[2025-12-14 18:55:45] 2025-12-14 17:55:45,228 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 18:55:45] 2025-12-14 17:55:45,290 [wrapper] ==== pilot stdout END ====
[2025-12-14 18:55:45] 2025-12-14 17:55:45,293 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 18:55:45] 2025-12-14 17:55:45,297 [wrapper] pilotpid: 2104040
[2025-12-14 18:55:45] 2025-12-14 17:55:45,301 [wrapper] Pilot exit status: 0
[2025-12-14 18:55:45] 2025-12-14 17:55:45,311 [wrapper] pandaids: 6929435586
[2025-12-14 18:55:45] 2025-12-14 17:55:45,332 [wrapper] cleanup supervisor_pilot 2104046 2104041
[2025-12-14 18:55:45] 2025-12-14 17:55:45,336 [wrapper] Test setup, not cleaning
[2025-12-14 18:55:45] 2025-12-14 17:55:45,339 [wrapper] apfmon messages muted
[2025-12-14 18:55:45] 2025-12-14 17:55:45,343 [wrapper] ==== wrapper stdout END ====
[2025-12-14 18:55:45] 2025-12-14 17:55:45,346 [wrapper] ==== wrapper stderr END ====
[2025-12-14 18:55:45]  *** Error codes and diagnostics ***
[2025-12-14 18:55:45]     "exeErrorCode": 65,
[2025-12-14 18:55:45]     "exeErrorDiag": "EVNTtoHITS got a SIGHUP signal (exit code 129)",
[2025-12-14 18:55:45]     "pilotErrorCode": 1305,
[2025-12-14 18:55:45]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGHUP signal (exit code 129)",
[2025-12-14 18:55:45]  *** Listing of results directory ***
[2025-12-14 18:55:45] total 220708
[2025-12-14 18:55:45] -rwx------ 1 boinc boinc     36322 Dec 14 08:47 runpilot2-wrapper.sh
[2025-12-14 18:55:45] -rw-r--r-- 1 boinc boinc      5112 Dec 14 08:47 queuedata.json
[2025-12-14 18:55:45] -rw-r--r-- 1 boinc boinc    579449 Dec 14 08:47 pilot3.tar.gz
[2025-12-14 18:55:45] -rw-r--r-- 1 boinc boinc       100 Dec 14 18:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 18:55:45] -rwxr-xr-x 1 boinc boinc      7986 Dec 14 18:51 run_atlas
[2025-12-14 18:55:45] -rw-r--r-- 1 boinc boinc       105 Dec 14 18:51 job.xml
[2025-12-14 18:55:45] -rw-r--r-- 2 boinc boinc 221864949 Dec 14 18:51 EVNT.47898761._000321.pool.root.1
[2025-12-14 18:55:45] drwxrwx--x 2 boinc boinc      4096 Dec 14 18:51 shared
[2025-12-14 18:55:45] -rw-r--r-- 2 boinc boinc    592386 Dec 14 18:51 input.tar.gz
[2025-12-14 18:55:45] -rw-r--r-- 2 boinc boinc     15847 Dec 14 18:51 start_atlas.sh
[2025-12-14 18:55:45] -rw-r--r-- 1 boinc boinc         0 Dec 14 18:51 boinc_setup_complete
[2025-12-14 18:55:45] -rw-r--r-- 1 boinc boinc      6368 Dec 14 18:51 init_data.xml
[2025-12-14 18:55:45] -rw-r--r-- 1 boinc boinc         0 Dec 14 18:51 boinc_lockfile
[2025-12-14 18:55:45] -rw-r--r-- 1 boinc boinc      2501 Dec 14 18:51 pandaJob.out
[2025-12-14 18:55:45] -rw------- 1 boinc boinc    991024 Dec 14 18:51 agis_schedconf.cvmfs.json
[2025-12-14 18:55:45] -rw------- 1 boinc boinc   1516240 Dec 14 18:51 agis_ddmendpoints.agis.ALL.json
[2025-12-14 18:55:45] drwx------ 5 boinc boinc      4096 Dec 14 18:51 pilot3
[2025-12-14 18:55:45] -rw-r--r-- 1 boinc boinc       522 Dec 14 18:52 boinc_task_state.xml
[2025-12-14 18:55:45] -rw------- 1 boinc boinc       973 Dec 14 18:52 memory_monitor_summary.json
[2025-12-14 18:55:45] -rw------- 1 boinc boinc     34109 Dec 14 18:52 log.47898763._008002.job.log.tgz.1
[2025-12-14 18:55:45] -rw------- 1 boinc boinc        95 Dec 14 18:54 pilot_heartbeat.json
[2025-12-14 18:55:45] -rw------- 1 boinc boinc      8403 Dec 14 18:54 heartbeat.json
[2025-12-14 18:55:45] -rw-r--r-- 1 boinc boinc      8192 Dec 14 18:55 boinc_mmap_file
[2025-12-14 18:55:45] -rw-r--r-- 1 boinc boinc        22 Dec 14 18:55 wrapper_checkpoint.txt
[2025-12-14 18:55:45] -rw------- 1 boinc boinc      4556 Dec 14 18:55 pilotlog.txt
[2025-12-14 18:55:45] -rw------- 1 boinc boinc     85939 Dec 14 18:55 log.47898763._008002.job.log.1
[2025-12-14 18:55:45] -rw------- 1 boinc boinc       188 Dec 14 18:55 output.list
[2025-12-14 18:55:45] -rw-r--r-- 1 boinc boinc       620 Dec 14 18:55 runtime_log
[2025-12-14 18:55:45] -rw------- 1 boinc boinc    143360 Dec 14 18:55 result.tar.gz
[2025-12-14 18:55:45] -rw-r--r-- 1 boinc boinc      8744 Dec 14 18:55 runtime_log.err
[2025-12-14 18:55:45] -rw------- 1 boinc boinc       648 Dec 14 18:55 KVxMDm1zvo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjmQKDmJIBTWm.diag
[2025-12-14 18:55:45] -rw-r--r-- 1 boinc boinc      6201 Dec 14 18:55 stderr.txt
[2025-12-14 18:55:45] No HITS result produced
[2025-12-14 18:55:45]  *** Contents of shared directory: ***
[2025-12-14 18:55:45] total 217408
[2025-12-14 18:55:45] -rw-r--r-- 2 boinc boinc 221864949 Dec 14 18:51 ATLAS.root_0
[2025-12-14 18:55:45] -rw-r--r-- 2 boinc boinc    592386 Dec 14 18:51 input.tar.gz
[2025-12-14 18:55:45] -rw-r--r-- 2 boinc boinc     15847 Dec 14 18:51 start_atlas.sh
[2025-12-14 18:55:45] -rw------- 1 boinc boinc    143360 Dec 14 18:55 result.tar.gz
18:55:47 (2100240): run_atlas exited; CPU time 27.981213
18:55:47 (2100240): called boinc_finish(0)

</stderr_txt>
]]>

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