Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:31:41 (4098359): wrapper (7.7.26015): starting
15:31:41 (4098359): wrapper: running run_atlas (--nthreads 4)
[2025-12-15 15:31:41] Arguments: --nthreads 4
[2025-12-15 15:31:41] Threads: 4
[2025-12-15 15:31:41] Checking for CVMFS
[2025-12-15 15:31:41] No cvmfs_config command found, will try listing directly
[2025-12-15 15:31:41] CVMFS is ok
[2025-12-15 15:31:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 15:31:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 15:31:41] Further information can be found at the LHC@home message board.
[2025-12-15 15:31:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 15:31:41] Checking for apptainer binary...
[2025-12-15 15:31:41] which: no apptainer in ((null))
[2025-12-15 15:31:41] apptainer is not installed, using version from CVMFS
[2025-12-15 15:31:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 15:31:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-12-15 15:31:41] apptainer works
[2025-12-15 15:31:41] Set ATHENA_PROC_NUMBER=4
[2025-12-15 15:31:41] Set ATHENA_CORE_NUMBER=4
[2025-12-15 15:31:41] Starting ATLAS job with PandaID=6929449146
[2025-12-15 15:31:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 18:31:39]  *** The last 200 lines of the pilot log: ***
[2025-12-15 18:31:39] 2025-12-15 17:26:25,776 | INFO     | maximum number of monitored processes: 6
[2025-12-15 18:31:39] 2025-12-15 17:26:27,306 | INFO     | time since job start (10472s) is within the limit (174528.0s)
[2025-12-15 18:31:39] 2025-12-15 17:26:28,279 | INFO     | monitor loop #712: job 0:6929449146 is in state 'finished'
[2025-12-15 18:31:39] 2025-12-15 17:26:28,279 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 18:31:39] 2025-12-15 17:26:29,312 | INFO     | time since job start (10474s) is within the limit (174528.0s)
[2025-12-15 18:31:39] 2025-12-15 17:26:30,782 | INFO     | monitor loop #713: job 0:6929449146 is in state 'finished'
[2025-12-15 18:31:39] 2025-12-15 17:26:30,783 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 18:31:39] 2025-12-15 17:26:31,156 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-15 18:31:39] 2025-12-15 17:26:31,177 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2688.8762265625
[2025-12-15 18:31:39] 2025-12-15 17:26:31,201 | INFO     | using path: /scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6929449146/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 18:31:39] 2025-12-15 17:26:31,202 | INFO     | extracted standard info from prmon json
[2025-12-15 18:31:39] 2025-12-15 17:26:31,202 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 18:31:39] 2025-12-15 17:26:31,202 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 18:31:39] 2025-12-15 17:26:31,202 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 18:31:39] 2025-12-15 17:26:31,202 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 18:31:39] 2025-12-15 17:26:31,205 | INFO     | fitting pss+swap vs Time
[2025-12-15 18:31:39] 2025-12-15 17:26:31,206 | INFO     | sum of square deviations: 1550429070.0
[2025-12-15 18:31:39] 2025-12-15 17:26:31,207 | INFO     | sum of deviations: 9250306997.00001
[2025-12-15 18:31:39] 2025-12-15 17:26:31,207 | INFO     | mean x: 1765814335.0
[2025-12-15 18:31:39] 2025-12-15 17:26:31,207 | INFO     | mean y: 2313975.2865497074
[2025-12-15 18:31:39] 2025-12-15 17:26:31,207 | INFO     | intersect: -10533043632.819584
[2025-12-15 18:31:39] 2025-12-15 17:26:31,208 | INFO     | chi2: 1.3339072800371716
[2025-12-15 18:31:39] 2025-12-15 17:26:31,208 | INFO     | sum of square deviations: 1418361477.5
[2025-12-15 18:31:39] 2025-12-15 17:26:31,209 | INFO     | sum of deviations: 8927577529.999994
[2025-12-15 18:31:39] 2025-12-15 17:26:31,209 | INFO     | mean x: 1765814182.5
[2025-12-15 18:31:39] 2025-12-15 17:26:31,209 | INFO     | mean y: 2313602.518072289
[2025-12-15 18:31:39] 2025-12-15 17:26:31,209 | INFO     | intersect: -11112231785.184273
[2025-12-15 18:31:39] 2025-12-15 17:26:31,210 | INFO     | chi2: 1.3348139653206024
[2025-12-15 18:31:39] 2025-12-15 17:26:31,210 | INFO     | current chi2=1.3348139653206024 (change=-0.06797213696933081 %)
[2025-12-15 18:31:39] 2025-12-15 17:26:31,210 | INFO     | right removable region: 165
[2025-12-15 18:31:39] 2025-12-15 17:26:31,210 | INFO     | sum of square deviations: 1418361477.5
[2025-12-15 18:31:39] 2025-12-15 17:26:31,211 | INFO     | sum of deviations: -10867653463.499998
[2025-12-15 18:31:39] 2025-12-15 17:26:31,211 | INFO     | mean x: 1765814487.5
[2025-12-15 18:31:39] 2025-12-15 17:26:31,212 | INFO     | mean y: 2336818.391566265
[2025-12-15 18:31:39] 2025-12-15 17:26:31,212 | INFO     | intersect: 13532216355.73105
[2025-12-15 18:31:39] 2025-12-15 17:26:31,212 | INFO     | chi2: 0.04031120529636784
[2025-12-15 18:31:39] 2025-12-15 17:26:31,212 | INFO     | current chi2=0.04031120529636784 (change=96.97796046999274 %)
[2025-12-15 18:31:39] 2025-12-15 17:26:31,212 | INFO     | sum of square deviations: 1294014960.0
[2025-12-15 18:31:39] 2025-12-15 17:26:31,213 | INFO     | sum of deviations: -8948313016.0
[2025-12-15 18:31:39] 2025-12-15 17:26:31,214 | INFO     | mean x: 1765814640.0
[2025-12-15 18:31:39] 2025-12-15 17:26:31,214 | INFO     | mean y: 2334458.5714285714
[2025-12-15 18:31:39] 2025-12-15 17:26:31,214 | INFO     | intersect: 12213215024.399937
[2025-12-15 18:31:39] 2025-12-15 17:26:31,214 | INFO     | chi2: 0.0387727156130561
[2025-12-15 18:31:39] 2025-12-15 17:26:31,214 | INFO     | current chi2=0.0387727156130561 (change=3.8165310910472003 %)
[2025-12-15 18:31:39] 2025-12-15 17:26:31,214 | INFO     | left removable region: 20
[2025-12-15 18:31:39] 2025-12-15 17:26:31,214 | INFO     | sum of square deviations: 945282840.0
[2025-12-15 18:31:39] 2025-12-15 17:26:31,215 | INFO     | sum of deviations: -4093599651.0000014
[2025-12-15 18:31:39] 2025-12-15 17:26:31,215 | INFO     | mean x: 1765814762.0
[2025-12-15 18:31:39] 2025-12-15 17:26:31,215 | INFO     | mean y: 2328026.227586207
[2025-12-15 18:31:39] 2025-12-15 17:26:31,216 | INFO     | intersect: 7649286574.056351
[2025-12-15 18:31:39] 2025-12-15 17:26:31,216 | INFO     | chi2: 0.028460877760346608
[2025-12-15 18:31:39] 2025-12-15 17:26:31,216 | INFO     | current memory leak: -4.33 B/s (using 145 data points, chi2=0.03)
[2025-12-15 18:31:39] 2025-12-15 17:26:31,216 | INFO     | could have reported an average CPU frequency of 2694 MHz (9 samples)
[2025-12-15 18:31:39] 2025-12-15 17:26:31,217 | INFO     | ..............................
[2025-12-15 18:31:39] 2025-12-15 17:26:31,217 | INFO     | . Timing measurements:
[2025-12-15 18:31:39] 2025-12-15 17:26:31,217 | INFO     | . get job = 0 s
[2025-12-15 18:31:39] 2025-12-15 17:26:31,217 | INFO     | . initial setup = 1 s
[2025-12-15 18:31:39] 2025-12-15 17:26:31,217 | INFO     | . payload setup = 9 s
[2025-12-15 18:31:39] 2025-12-15 17:26:31,217 | INFO     | . stage-in = 0 s
[2025-12-15 18:31:39] 2025-12-15 17:26:31,217 | INFO     | . payload execution = 10432 s
[2025-12-15 18:31:39] 2025-12-15 17:26:31,217 | INFO     | . stage-out = 0 s
[2025-12-15 18:31:39] 2025-12-15 17:26:31,217 | INFO     | . log creation = 0 s
[2025-12-15 18:31:39] 2025-12-15 17:26:31,217 | INFO     | ..............................
[2025-12-15 18:31:39] 2025-12-15 17:26:31,312 | INFO     | 
[2025-12-15 18:31:39] 2025-12-15 17:26:31,313 | INFO     | job summary report
[2025-12-15 18:31:39] 2025-12-15 17:26:31,313 | INFO     | --------------------------------------------------
[2025-12-15 18:31:39] 2025-12-15 17:26:31,313 | INFO     | PanDA job id: 6929449146
[2025-12-15 18:31:39] 2025-12-15 17:26:31,313 | INFO     | task id: 47886933
[2025-12-15 18:31:39] 2025-12-15 17:26:31,314 | INFO     | errors: (none)
[2025-12-15 18:31:39] 2025-12-15 17:26:31,314 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 18:31:39] 2025-12-15 17:26:31,314 | INFO     | pilot state: finished 
[2025-12-15 18:31:39] 2025-12-15 17:26:31,314 | INFO     | transexitcode: 0
[2025-12-15 18:31:39] 2025-12-15 17:26:31,314 | INFO     | exeerrorcode: 0
[2025-12-15 18:31:39] 2025-12-15 17:26:31,314 | INFO     | exeerrordiag: 
[2025-12-15 18:31:39] 2025-12-15 17:26:31,314 | INFO     | exitcode: 0
[2025-12-15 18:31:39] 2025-12-15 17:26:31,314 | INFO     | exitmsg: OK
[2025-12-15 18:31:39] 2025-12-15 17:26:31,314 | INFO     | cpuconsumptiontime: 39974 s
[2025-12-15 18:31:39] 2025-12-15 17:26:31,314 | INFO     | nevents: 400
[2025-12-15 18:31:39] 2025-12-15 17:26:31,314 | INFO     | neventsw: 0
[2025-12-15 18:31:39] 2025-12-15 17:26:31,315 | INFO     | pid: 4140878
[2025-12-15 18:31:39] 2025-12-15 17:26:31,315 | INFO     | pgrp: 4140878
[2025-12-15 18:31:39] 2025-12-15 17:26:31,315 | INFO     | corecount: 4
[2025-12-15 18:31:39] 2025-12-15 17:26:31,315 | INFO     | event service: False
[2025-12-15 18:31:39] 2025-12-15 17:26:31,315 | INFO     | sizes: {0: 2283978, 7: 2284240, 11: 2284268, 10446: 2313507, 10447: 2313506, 10449: 2322584, 10451: 2322768, 10459: 2323026}
[2025-12-15 18:31:39] 2025-12-15 17:26:31,315 | INFO     | --------------------------------------------------
[2025-12-15 18:31:39] 2025-12-15 17:26:31,315 | INFO     | 
[2025-12-15 18:31:39] 2025-12-15 17:26:31,315 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2025-12-15 18:31:39] 2025-12-15 17:26:31,324 | INFO     | time since job start (10476s) is within the limit (174528.0s)
[2025-12-15 18:31:39] 2025-12-15 17:26:31,348 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 18:31:39] 2025-12-15 17:26:31,348 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 18:31:39] 2025-12-15 17:26:31,348 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 18:31:39] 2025-12-15 17:26:31,348 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 18:31:39] 2025-12-15 17:26:31,348 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 18:31:39] 2025-12-15 17:26:31,348 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 18:31:39] 2025-12-15 17:26:31,348 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 18:31:39] 2025-12-15 17:26:31,348 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 18:31:39] 2025-12-15 17:26:31,349 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 18:31:39] 2025-12-15 17:26:31,349 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 18:31:39] 2025-12-15 17:26:31,349 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 18:31:39] 2025-12-15 17:26:31,349 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 18:31:39] 2025-12-15 17:26:31,349 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 18:31:39] 2025-12-15 17:26:31,349 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 18:31:39] 2025-12-15 17:26:31,349 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 18:31:39] 2025-12-15 17:26:31,349 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 18:31:39] 2025-12-15 17:26:31,349 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 18:31:39] 2025-12-15 17:26:31,349 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 18:31:39] 2025-12-15 17:26:31,349 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 18:31:39] 2025-12-15 17:26:31,350 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 18:31:39] 2025-12-15 17:26:31,350 | INFO     | job 6929449146 has completed (purged errors)
[2025-12-15 18:31:39] 2025-12-15 17:26:31,350 | INFO     | overall cleanup function is called
[2025-12-15 18:31:39] 2025-12-15 17:26:32,360 | INFO     | --- collectZombieJob: --- 10, [4140878]
[2025-12-15 18:31:39] 2025-12-15 17:26:32,360 | INFO     | zombie collector waiting for pid 4140878
[2025-12-15 18:31:39] 2025-12-15 17:26:32,360 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 18:31:39] 2025-12-15 17:26:32,360 | INFO     | collected zombie processes
[2025-12-15 18:31:39] 2025-12-15 17:26:32,360 | INFO     | will attempt to kill all subprocesses of pid=4140878
[2025-12-15 18:31:39] 2025-12-15 17:26:33,197 | INFO     | process IDs to be killed: [4140878] (in reverse order)
[2025-12-15 18:31:39] 2025-12-15 17:26:33,462 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 18:31:39] 2025-12-15 17:26:33,462 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 18:31:39] 2025-12-15 17:26:33,494 | INFO     | did not find any defunct processes belonging to 4140878
[2025-12-15 18:31:39] 2025-12-15 17:26:33,525 | INFO     | did not find any defunct processes belonging to 4140878
[2025-12-15 18:31:39] 2025-12-15 17:26:33,526 | INFO     | ready for new job
[2025-12-15 18:31:39] 2025-12-15 17:26:33,526 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 18:31:39] 2025-12-15 17:26:33,528 | INFO     | ***************************************
[2025-12-15 18:31:39] 2025-12-15 17:26:33,529 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 18:31:39] 2025-12-15 17:26:33,529 | INFO     | ***************************************
[2025-12-15 18:31:39] 2025-12-15 17:26:33,529 | INFO     | 
[2025-12-15 18:31:39] 2025-12-15 17:26:33,538 | INFO     | architecture information:
[2025-12-15 18:31:39] 2025-12-15 17:26:33,538 | INFO     | executing command: cat /etc/os-release
[2025-12-15 18:31:39] 2025-12-15 17:26:33,561 | INFO     | cat /etc/os-release:
[2025-12-15 18:31:39] NAME="CentOS Linux"
[2025-12-15 18:31:39] VERSION="7 (Core)"
[2025-12-15 18:31:39] ID="centos"
[2025-12-15 18:31:39] ID_LIKE="rhel fedora"
[2025-12-15 18:31:39] VERSION_ID="7"
[2025-12-15 18:31:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 18:31:39] ANSI_COLOR="0;31"
[2025-12-15 18:31:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 18:31:39] HOME_URL="https://www.centos.org/"
[2025-12-15 18:31:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 18:31:39] 
[2025-12-15 18:31:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 18:31:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 18:31:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 18:31:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 18:31:39] 
[2025-12-15 18:31:39] 2025-12-15 17:26:33,561 | INFO     | ***************************************
[2025-12-15 18:31:39] 2025-12-15 17:26:34,065 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2025-12-15 18:31:39] 2025-12-15 17:26:34,089 | INFO     | sufficient remaining disk space (3300779884544 B)
[2025-12-15 18:31:39] 2025-12-15 17:26:34,089 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 18:31:39] 2025-12-15 17:26:34,090 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 18:31:39] 2025-12-15 17:26:34,090 | INFO     | update_server=False
[2025-12-15 18:31:39] 2025-12-15 17:26:34,090 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 18:31:39] 2025-12-15 17:26:34,197 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 18:31:39] 2025-12-15 17:26:34,291 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 18:31:39] 2025-12-15 17:26:34,291 | INFO     | aborting loop
[2025-12-15 18:31:39] 2025-12-15 17:26:34,848 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 18:31:39] 2025-12-15 17:26:34,886 | INFO     | all job control threads have been joined
[2025-12-15 18:31:39] 2025-12-15 17:26:35,091 | INFO     | all data control threads have been joined
[2025-12-15 18:31:39] 2025-12-15 17:26:35,095 | INFO     | [job] retrieve thread has finished
[2025-12-15 18:31:39] 2025-12-15 17:26:35,296 | INFO     | [job] job monitor thread has finished
[2025-12-15 18:31:39] 2025-12-15 17:26:35,418 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 18:31:39] 2025-12-15 17:26:35,496 | INFO     | all payload control threads have been joined
[2025-12-15 18:31:39] 2025-12-15 17:26:35,891 | INFO     | [job] control thread has finished
[2025-12-15 18:31:39] 2025-12-15 17:26:36,097 | INFO     | [data] control thread has finished
[2025-12-15 18:31:39] 2025-12-15 17:26:36,276 | INFO     | [data] copytool_in thread has finished
[2025-12-15 18:31:39] 2025-12-15 17:26:36,323 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 18:31:39] 2025-12-15 17:26:36,333 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 18:31:39] 2025-12-15 17:26:36,342 | INFO     | [payload] failed_post thread has finished
[2025-12-15 18:31:39] 2025-12-15 17:26:36,366 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 18:31:39] 2025-12-15 17:26:36,411 | INFO     | [job] validate thread has finished
[2025-12-15 18:31:39] 2025-12-15 17:26:36,500 | INFO     | [payload] control thread has finished
[2025-12-15 18:31:39] 2025-12-15 17:26:36,524 | INFO     | [payload] validate_post thread has finished
[2025-12-15 18:31:39] 2025-12-15 17:26:36,851 | INFO     | [data] copytool_out thread has finished
[2025-12-15 18:31:39] 2025-12-15 17:26:37,329 | INFO     | [job] queue monitor thread has finished
[2025-12-15 18:31:39] 2025-12-15 17:26:38,201 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 18:31:39] 2025-12-15 17:26:45,087 | INFO     | job.realtimelogging is not enabled
[2025-12-15 18:31:39] 2025-12-15 17:26:46,092 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 18:31:39] 2025-12-15 17:27:05,402 | INFO     | PID=4110639 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-15 18:31:39] 2025-12-15 17:27:05,402 | INFO     | .. there are 8 such processes running
[2025-12-15 18:31:39] 2025-12-15 17:27:05,402 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 18:31:39] 2025-12-15 17:27:05,402 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 18:31:39] 2025-12-15 17:27:05,402 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 18:31:39] 2025-12-15 17:27:11,650 | INFO     | [monitor] cgroup control has ended
[2025-12-15 18:31:39] 2025-12-15 17:27:12,655 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22793716180800)>', '<ExcThread(monitor, started 22793477388032)>']
[2025-12-15 18:31:39] 2025-12-15 17:27:13,440 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 18:31:39] 2025-12-15 17:27:13,440 | INFO     | [monitor] control thread has ended
[2025-12-15 18:31:39] 2025-12-15 17:27:17,680 | INFO     | all workflow threads have been joined
[2025-12-15 18:31:39] 2025-12-15 17:27:17,680 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 18:31:39] 2025-12-15 17:27:17,680 | INFO     | traces error code: 0
[2025-12-15 18:31:39] 2025-12-15 17:27:17,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 18:31:39] 2025-12-15 17:27:17,860 [wrapper] ==== pilot stdout END ====
[2025-12-15 18:31:39] 2025-12-15 17:27:17,864 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 18:31:39] 2025-12-15 17:27:17,868 [wrapper] pilotpid: 4110639
[2025-12-15 18:31:39] 2025-12-15 17:27:17,872 [wrapper] Pilot exit status: 0
[2025-12-15 18:31:39] 2025-12-15 17:27:17,889 [wrapper] pandaids: 6929449146
[2025-12-15 18:31:39] 2025-12-15 17:27:18,052 [wrapper] cleanup supervisor_pilot  252557 4110640
[2025-12-15 18:31:39] 2025-12-15 17:27:18,057 [wrapper] Test setup, not cleaning
[2025-12-15 18:31:39] 2025-12-15 17:27:18,061 [wrapper] apfmon messages muted
[2025-12-15 18:31:39] 2025-12-15 17:27:18,064 [wrapper] ==== wrapper stdout END ====
[2025-12-15 18:31:39] 2025-12-15 17:27:18,068 [wrapper] ==== wrapper stderr END ====
[2025-12-15 18:31:39]  *** Error codes and diagnostics ***
[2025-12-15 18:31:39]     "exeErrorCode": 0,
[2025-12-15 18:31:39]     "exeErrorDiag": "",
[2025-12-15 18:31:39]     "pilotErrorCode": 0,
[2025-12-15 18:31:39]     "pilotErrorDiag": "",
[2025-12-15 18:31:39]  *** Listing of results directory ***
[2025-12-15 18:31:39] total 332892
[2025-12-15 18:31:39] -rw-r--r-- 1 boinc boinc    579449 Dec 14 12:00 pilot3.tar.gz
[2025-12-15 18:31:39] -rwx------ 1 boinc boinc     36322 Dec 14 12:03 runpilot2-wrapper.sh
[2025-12-15 18:31:39] -rw-r--r-- 1 boinc boinc      5112 Dec 14 12:03 queuedata.json
[2025-12-15 18:31:39] -rw-r--r-- 1 boinc boinc       100 Dec 15 15:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 18:31:39] -rwxr-xr-x 1 boinc boinc      7986 Dec 15 15:31 run_atlas
[2025-12-15 18:31:39] -rw-r--r-- 1 boinc boinc       105 Dec 15 15:31 job.xml
[2025-12-15 18:31:39] -rw-r--r-- 1 boinc boinc      6691 Dec 15 15:31 init_data.xml
[2025-12-15 18:31:39] -rw-r--r-- 2 boinc boinc 190197402 Dec 15 15:31 EVNT.47886929._000132.pool.root.1
[2025-12-15 18:31:39] -rw-r--r-- 2 boinc boinc     15847 Dec 15 15:31 start_atlas.sh
[2025-12-15 18:31:39] drwxrwx--x 2 boinc boinc      4096 Dec 15 15:31 shared
[2025-12-15 18:31:39] -rw-r--r-- 2 boinc boinc    592398 Dec 15 15:31 input.tar.gz
[2025-12-15 18:31:39] -rw-r--r-- 1 boinc boinc         0 Dec 15 15:31 boinc_lockfile
[2025-12-15 18:31:39] -rw-r--r-- 1 boinc boinc      2514 Dec 15 15:31 pandaJob.out
[2025-12-15 18:31:39] -rw------- 1 boinc boinc    994497 Dec 15 15:31 agis_schedconf.cvmfs.json
[2025-12-15 18:31:39] -rw------- 1 boinc boinc   1516240 Dec 15 15:31 agis_ddmendpoints.agis.ALL.json
[2025-12-15 18:31:39] drwx------ 5 boinc boinc      4096 Dec 15 15:31 pilot3
[2025-12-15 18:31:39] -rw------- 1 boinc boinc 143136045 Dec 15 18:25 HITS.47886933._003010.pool.root.1
[2025-12-15 18:31:39] -rw-r--r-- 1 boinc boinc       528 Dec 15 18:26 boinc_task_state.xml
[2025-12-15 18:31:39] -rw------- 1 boinc boinc      1026 Dec 15 18:26 memory_monitor_summary.json
[2025-12-15 18:31:39] -rw------- 1 boinc boinc    353952 Dec 15 18:26 log.47886933._003010.job.log.tgz.1
[2025-12-15 18:31:39] -rw------- 1 boinc boinc        95 Dec 15 18:26 pilot_heartbeat.json
[2025-12-15 18:31:39] -rw------- 1 boinc boinc      7781 Dec 15 18:26 heartbeat.json
[2025-12-15 18:31:39] -rw------- 1 boinc boinc      4908 Dec 15 18:27 pilotlog.txt
[2025-12-15 18:31:39] -rw------- 1 boinc boinc   1459243 Dec 15 18:27 log.47886933._003010.job.log.1
[2025-12-15 18:31:39] -rw------- 1 boinc boinc       357 Dec 15 18:27 output.list
[2025-12-15 18:31:39] -rw-r--r-- 1 boinc boinc       620 Dec 15 18:27 runtime_log
[2025-12-15 18:31:39] -rw------- 1 boinc boinc   1832960 Dec 15 18:27 result.tar.gz
[2025-12-15 18:31:39] -rw-r--r-- 1 boinc boinc      9223 Dec 15 18:27 runtime_log.err
[2025-12-15 18:31:39] -rw------- 1 boinc boinc       665 Dec 15 18:27 VtsKDms3yo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhDRKDmQxnJJn.diag
[2025-12-15 18:31:39] -rw-r--r-- 1 boinc boinc        26 Dec 15 18:31 wrapper_checkpoint.txt
[2025-12-15 18:31:39] -rw-r--r-- 1 boinc boinc      8192 Dec 15 18:31 boinc_mmap_file
[2025-12-15 18:31:39] -rw-r--r-- 1 boinc boinc     21083 Dec 15 18:31 stderr.txt
[2025-12-15 18:31:39] HITS file was successfully produced:
[2025-12-15 18:31:39] -rw------- 1 boinc boinc 143136045 Dec 15 18:25 shared/HITS.pool.root.1
[2025-12-15 18:31:39]  *** Contents of shared directory: ***
[2025-12-15 18:31:39] total 327920
[2025-12-15 18:31:39] -rw-r--r-- 2 boinc boinc 190197402 Dec 15 15:31 ATLAS.root_0
[2025-12-15 18:31:39] -rw-r--r-- 2 boinc boinc     15847 Dec 15 15:31 start_atlas.sh
[2025-12-15 18:31:39] -rw-r--r-- 2 boinc boinc    592398 Dec 15 15:31 input.tar.gz
[2025-12-15 18:31:39] -rw------- 1 boinc boinc 143136045 Dec 15 18:25 HITS.pool.root.1
[2025-12-15 18:31:39] -rw------- 1 boinc boinc   1832960 Dec 15 18:27 result.tar.gz
18:31:40 (4098359): run_atlas exited; CPU time 40700.940228
18:31:40 (4098359): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN