Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:36:20 (2844355): wrapper (7.7.26015): starting
20:36:20 (2844355): wrapper: running run_atlas (--nthreads 3)
[2025-12-14 20:36:20] Arguments: --nthreads 3
[2025-12-14 20:36:20] Threads: 3
[2025-12-14 20:36:20] Checking for CVMFS
[2025-12-14 20:36:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 20:36:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 20:36:20] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 20:36:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 20:36:21] 2.9.2.0 2238870 2339 79348 154006 0 57 20748318 36864001 0 130560 0 1600397 99.990 81849 15967 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-14 20:36:21] CVMFS is ok
[2025-12-14 20:36:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 20:36:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 20:36:21] Further information can be found at the LHC@home message board.
[2025-12-14 20:36:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 20:36:21] Checking for apptainer binary...
[2025-12-14 20:36:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 20:36:21] Running /usr/bin/apptainer --version
[2025-12-14 20:36:21] apptainer version 1.4.1-1.1
[2025-12-14 20:36:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 20:36:21] magicA161a
[2025-12-14 20:36:21] apptainer works
[2025-12-14 20:36:21] Set ATHENA_PROC_NUMBER=3
[2025-12-14 20:36:21] Set ATHENA_CORE_NUMBER=3
[2025-12-14 20:36:21] Starting ATLAS job with PandaID=6929448689
[2025-12-14 20:36:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 22:26:57]  *** The last 200 lines of the pilot log: ***
[2025-12-14 22:26:57] 2025-12-14 21:26:27,317 | INFO     | all job control threads have been joined
[2025-12-14 22:26:57] 2025-12-14 21:26:27,517 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 22:26:57] 2025-12-14 21:26:27,518 | INFO     | aborting loop
[2025-12-14 22:26:57] 2025-12-14 21:26:27,699 | INFO     | all data control threads have been joined
[2025-12-14 22:26:57] 2025-12-14 21:26:27,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 22:26:57] 2025-12-14 21:26:27,942 | INFO     | all payload control threads have been joined
[2025-12-14 22:26:57] 2025-12-14 21:26:27,958 | INFO     | [job] retrieve thread has finished
[2025-12-14 22:26:57] 2025-12-14 21:26:27,958 | INFO     | [job] queue monitor thread has finished
[2025-12-14 22:26:57] 2025-12-14 21:26:27,981 | INFO     | [data] copytool_in thread has finished
[2025-12-14 22:26:57] 2025-12-14 21:26:28,157 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 22:26:57] 2025-12-14 21:26:28,257 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 22:26:57] 2025-12-14 21:26:28,323 | INFO     | [job] control thread has finished
[2025-12-14 22:26:57] 2025-12-14 21:26:28,498 | INFO     | [job] validate thread has finished
[2025-12-14 22:26:57] 2025-12-14 21:26:28,523 | INFO     | [job] job monitor thread has finished
[2025-12-14 22:26:57] 2025-12-14 21:26:28,577 | INFO     | [payload] failed_post thread has finished
[2025-12-14 22:26:57] 2025-12-14 21:26:28,587 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 22:26:57] 2025-12-14 21:26:28,662 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 22:26:57] 2025-12-14 21:26:28,704 | INFO     | [data] control thread has finished
[2025-12-14 22:26:57] 2025-12-14 21:26:28,948 | INFO     | [payload] control thread has finished
[2025-12-14 22:26:57] 2025-12-14 21:26:29,092 | INFO     | [payload] validate_post thread has finished
[2025-12-14 22:26:57] 2025-12-14 21:26:29,921 | INFO     | [data] copytool_out thread has finished
[2025-12-14 22:26:57] 2025-12-14 21:26:30,959 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 22:26:57] 2025-12-14 21:26:32,284 | INFO     | [monitor] cgroup control has ended
[2025-12-14 22:26:57] 2025-12-14 21:26:33,816 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139911385163584)>', '<ExcThread(monitor, started 139910765864704)>']
[2025-12-14 22:26:57] 2025-12-14 21:26:38,842 | INFO     | all workflow threads have been joined
[2025-12-14 22:26:57] 2025-12-14 21:26:38,842 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 22:26:57] 2025-12-14 21:26:38,843 | INFO     | traces error code: 0
[2025-12-14 22:26:57] 2025-12-14 21:26:38,843 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 22:26:57] 2025-12-14 21:26:57,874 | INFO     | PID=2848074 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 22:26:57] 2025-12-14 21:26:57,875 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 22:26:57] 2025-12-14 21:26:57,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 22:26:57] 2025-12-14 21:26:57,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 22:26:57] 2025-12-14 21:26:57,875 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 22:26:57] 2025-12-14 21:26:57,875 | INFO     | [monitor] control thread has ended
[2025-12-14 22:26:57] 2025-12-14 21:26:57,921 [wrapper] ==== pilot stdout END ====
[2025-12-14 22:26:57] 2025-12-14 21:26:57,923 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 22:26:57] 2025-12-14 21:26:57,926 [wrapper] pilotpid: 2848074
[2025-12-14 22:26:57] 2025-12-14 21:26:57,928 [wrapper] Pilot exit status: 0
[2025-12-14 22:26:57] 2025-12-14 21:26:57,935 [wrapper] pandaids: 6929448689
[2025-12-14 22:26:57] 2025-12-14 21:26:57,951 [wrapper] cleanup supervisor_pilot 2869089 2848075
[2025-12-14 22:26:57] 2025-12-14 21:26:57,953 [wrapper] Test setup, not cleaning
[2025-12-14 22:26:57] 2025-12-14 21:26:57,956 [wrapper] apfmon messages muted
[2025-12-14 22:26:57] 2025-12-14 21:26:57,958 [wrapper] ==== wrapper stdout END ====
[2025-12-14 22:26:57] 2025-12-14 21:26:57,960 [wrapper] ==== wrapper stderr END ====
[2025-12-14 22:26:57]  *** Error codes and diagnostics ***
[2025-12-14 22:26:57]     "exeErrorCode": 0,
[2025-12-14 22:26:57]     "exeErrorDiag": "",
[2025-12-14 22:26:57]     "pilotErrorCode": 0,
[2025-12-14 22:26:57]     "pilotErrorDiag": "",
[2025-12-14 22:26:57]  *** Listing of results directory ***
[2025-12-14 22:26:58] total 411612
[2025-12-14 22:26:58] -rwx------ 1 boinc boinc     36322 Dec 14 12:00 runpilot2-wrapper.sh
[2025-12-14 22:26:58] -rw-r--r-- 1 boinc boinc    579449 Dec 14 12:00 pilot3.tar.gz
[2025-12-14 22:26:58] -rw-r--r-- 1 boinc boinc      5112 Dec 14 12:01 queuedata.json
[2025-12-14 22:26:58] -rw-r--r-- 1 boinc boinc       100 Dec 14 20:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 22:26:58] -rwxr-xr-x 1 boinc boinc      7986 Dec 14 20:36 run_atlas
[2025-12-14 22:26:58] -rw-r--r-- 1 boinc boinc       105 Dec 14 20:36 job.xml
[2025-12-14 22:26:58] -rw-r--r-- 2 boinc boinc 214393403 Dec 14 20:36 EVNT.47898833._000126.pool.root.1
[2025-12-14 22:26:58] -rw-r--r-- 2 boinc boinc    592404 Dec 14 20:36 input.tar.gz
[2025-12-14 22:26:58] -rw-r--r-- 2 boinc boinc     15847 Dec 14 20:36 start_atlas.sh
[2025-12-14 22:26:58] drwxrwx--x 2 boinc boinc      4096 Dec 14 20:36 shared
[2025-12-14 22:26:58] -rw-r--r-- 1 boinc boinc         0 Dec 14 20:36 boinc_setup_complete
[2025-12-14 22:26:58] -rw-r--r-- 1 boinc boinc      6448 Dec 14 20:36 init_data.xml
[2025-12-14 22:26:58] -rw-r--r-- 1 boinc boinc         0 Dec 14 20:36 boinc_lockfile
[2025-12-14 22:26:58] -rw-r--r-- 1 boinc boinc      2552 Dec 14 20:36 pandaJob.out
[2025-12-14 22:26:58] -rw------- 1 boinc boinc    991016 Dec 14 20:36 agis_schedconf.cvmfs.json
[2025-12-14 22:26:58] -rw------- 1 boinc boinc   1516240 Dec 14 20:36 agis_ddmendpoints.agis.ALL.json
[2025-12-14 22:26:58] drwx------ 5 boinc boinc      4096 Dec 14 20:36 pilot3
[2025-12-14 22:26:58] -rw------- 1 boinc boinc 200746709 Dec 14 22:26 HITS.47898836._003137.pool.root.1
[2025-12-14 22:26:58] -rw-r--r-- 1 boinc boinc       529 Dec 14 22:26 boinc_task_state.xml
[2025-12-14 22:26:58] -rw------- 1 boinc boinc      1027 Dec 14 22:26 memory_monitor_summary.json
[2025-12-14 22:26:58] -rw------- 1 boinc boinc    273798 Dec 14 22:26 log.47898836._003137.job.log.tgz.1
[2025-12-14 22:26:58] -rw------- 1 boinc boinc      7751 Dec 14 22:26 heartbeat.json
[2025-12-14 22:26:58] -rw-r--r-- 1 boinc boinc      8192 Dec 14 22:26 boinc_mmap_file
[2025-12-14 22:26:58] -rw-r--r-- 1 boinc boinc        27 Dec 14 22:26 wrapper_checkpoint.txt
[2025-12-14 22:26:58] -rw------- 1 boinc boinc       747 Dec 14 22:26 pilotlog.txt
[2025-12-14 22:26:58] -rw------- 1 boinc boinc        95 Dec 14 22:26 pilot_heartbeat.json
[2025-12-14 22:26:58] -rw------- 1 boinc boinc    954044 Dec 14 22:26 log.47898836._003137.job.log.1
[2025-12-14 22:26:58] -rw------- 1 boinc boinc       357 Dec 14 22:26 output.list
[2025-12-14 22:26:58] -rw-r--r-- 1 boinc boinc       620 Dec 14 22:26 runtime_log
[2025-12-14 22:26:58] -rw------- 1 boinc boinc   1249280 Dec 14 22:26 result.tar.gz
[2025-12-14 22:26:58] -rw------- 1 boinc boinc       663 Dec 14 22:26 sx7KDmF1yo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2RVKDmDJT6Lm.diag
[2025-12-14 22:26:58] -rw-r--r-- 1 boinc boinc      8917 Dec 14 22:26 runtime_log.err
[2025-12-14 22:26:58] -rw-r--r-- 1 boinc boinc      6937 Dec 14 22:26 stderr.txt
[2025-12-14 22:26:58] HITS file was successfully produced:
[2025-12-14 22:26:58] -rw------- 1 boinc boinc 200746709 Dec 14 22:26 shared/HITS.pool.root.1
[2025-12-14 22:26:58]  *** Contents of shared directory: ***
[2025-12-14 22:26:58] total 407240
[2025-12-14 22:26:58] -rw-r--r-- 2 boinc boinc 214393403 Dec 14 20:36 ATLAS.root_0
[2025-12-14 22:26:58] -rw-r--r-- 2 boinc boinc    592404 Dec 14 20:36 input.tar.gz
[2025-12-14 22:26:58] -rw-r--r-- 2 boinc boinc     15847 Dec 14 20:36 start_atlas.sh
[2025-12-14 22:26:58] -rw------- 1 boinc boinc 200746709 Dec 14 22:26 HITS.pool.root.1
[2025-12-14 22:26:58] -rw------- 1 boinc boinc   1249280 Dec 14 22:26 result.tar.gz
22:26:59 (2844355): run_atlas exited; CPU time 19174.494799
22:26:59 (2844355): called boinc_finish(0)

</stderr_txt>
]]>

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