Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:55:05 (24564): wrapper (7.7.26015): starting
10:55:05 (24564): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 10:55:05] Arguments: --nthreads 8
[2025-12-14 10:55:05] Threads: 8
[2025-12-14 10:55:05] Checking for CVMFS
[2025-12-14 10:55:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 10:55:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 10:55:06] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 10:55:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 10:55:06] 2.11.2.0 3643 92011 132260 154000 0 59 17370634 18432000 1833 130560 0 57521033 99.980 3506926 29370 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 10:55:06] CVMFS is ok
[2025-12-14 10:55:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 10:55:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 10:55:06] Further information can be found at the LHC@home message board.
[2025-12-14 10:55:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 10:55:06] Checking for apptainer binary...
[2025-12-14 10:55:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 10:55:06] Running /usr/bin/apptainer --version
[2025-12-14 10:55:06] apptainer version 1.3.2-1.el7
[2025-12-14 10:55:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 10:55:07] c-206-15.aglt2.org
[2025-12-14 10:55:07] apptainer works
[2025-12-14 10:55:07] Set ATHENA_PROC_NUMBER=8
[2025-12-14 10:55:07] Set ATHENA_CORE_NUMBER=8
[2025-12-14 10:55:07] Starting ATLAS job with PandaID=6929448794
[2025-12-14 10:55:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 15:02:05]  *** The last 200 lines of the pilot log: ***
[2025-12-14 15:02:05] 2025-12-14 20:01:28,694 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-14 15:02:05] 2025-12-14 20:01:28,803 | INFO     | monitor loop #1068: job 0:6929448794 is in state 'finished'
[2025-12-14 15:02:05] 2025-12-14 20:01:28,803 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 15:02:05] 2025-12-14 20:01:29,926 | INFO     | time since job start (14772s) is within the limit (174528.0s)
[2025-12-14 15:02:05] 2025-12-14 20:01:31,308 | INFO     | monitor loop #1069: job 0:6929448794 is in state 'finished'
[2025-12-14 15:02:05] 2025-12-14 20:01:31,308 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 15:02:05] 2025-12-14 20:01:31,930 | INFO     | time since job start (14774s) is within the limit (174528.0s)
[2025-12-14 15:02:05] 2025-12-14 20:01:32,023 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-14 15:02:05] 2025-12-14 20:01:32,027 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2505.6666666666665
[2025-12-14 15:02:05] 2025-12-14 20:01:32,030 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929448794/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 15:02:05] 2025-12-14 20:01:32,030 | INFO     | extracted standard info from prmon json
[2025-12-14 15:02:05] 2025-12-14 20:01:32,030 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 15:02:05] 2025-12-14 20:01:32,030 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 15:02:05] 2025-12-14 20:01:32,031 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 15:02:05] 2025-12-14 20:01:32,031 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 15:02:05] 2025-12-14 20:01:32,034 | INFO     | fitting pss+swap vs Time
[2025-12-14 15:02:05] 2025-12-14 20:01:32,035 | INFO     | sum of square deviations: 4394577280.5
[2025-12-14 15:02:05] 2025-12-14 20:01:32,036 | INFO     | sum of deviations: 21969835914.499996
[2025-12-14 15:02:05] 2025-12-14 20:01:32,036 | INFO     | mean x: 1765735092.5
[2025-12-14 15:02:05] 2025-12-14 20:01:32,036 | INFO     | mean y: 2482704.376033058
[2025-12-14 15:02:05] 2025-12-14 20:01:32,036 | INFO     | intersect: -8824967076.251274
[2025-12-14 15:02:05] 2025-12-14 20:01:32,037 | INFO     | chi2: 1.403386674325221
[2025-12-14 15:02:05] 2025-12-14 20:01:32,037 | INFO     | sum of square deviations: 4127772278.0
[2025-12-14 15:02:05] 2025-12-14 20:01:32,038 | INFO     | sum of deviations: 21332448591.999996
[2025-12-14 15:02:05] 2025-12-14 20:01:32,038 | INFO     | mean x: 1765734940.0
[2025-12-14 15:02:05] 2025-12-14 20:01:32,038 | INFO     | mean y: 2482340.379746835
[2025-12-14 15:02:05] 2025-12-14 20:01:32,039 | INFO     | intersect: -9122887786.11835
[2025-12-14 15:02:05] 2025-12-14 20:01:32,039 | INFO     | chi2: 1.403968585094899
[2025-12-14 15:02:05] 2025-12-14 20:01:32,039 | INFO     | current chi2=1.403968585094899 (change=-0.041464749546510964 %)
[2025-12-14 15:02:05] 2025-12-14 20:01:32,039 | INFO     | right removable region: 236
[2025-12-14 15:02:05] 2025-12-14 20:01:32,039 | INFO     | sum of square deviations: 4127772278.0
[2025-12-14 15:02:05] 2025-12-14 20:01:32,041 | INFO     | sum of deviations: -11157788343.0
[2025-12-14 15:02:05] 2025-12-14 20:01:32,041 | INFO     | mean x: 1765735245.0
[2025-12-14 15:02:05] 2025-12-14 20:01:32,041 | INFO     | mean y: 2501446.0337552745
[2025-12-14 15:02:05] 2025-12-14 20:01:32,041 | INFO     | intersect: 4775463423.246116
[2025-12-14 15:02:05] 2025-12-14 20:01:32,041 | INFO     | chi2: 0.11054898572323897
[2025-12-14 15:02:05] 2025-12-14 20:01:32,041 | INFO     | current chi2=0.11054898572323897 (change=92.12269948505866 %)
[2025-12-14 15:02:05] 2025-12-14 20:01:32,042 | INFO     | sum of square deviations: 3871990738.0
[2025-12-14 15:02:05] 2025-12-14 20:01:32,043 | INFO     | sum of deviations: -8467363639.999998
[2025-12-14 15:02:05] 2025-12-14 20:01:32,043 | INFO     | mean x: 1765735397.5
[2025-12-14 15:02:05] 2025-12-14 20:01:32,043 | INFO     | mean y: 2499809.0862068967
[2025-12-14 15:02:05] 2025-12-14 20:01:32,043 | INFO     | intersect: 3863852977.0886564
[2025-12-14 15:02:05] 2025-12-14 20:01:32,044 | INFO     | chi2: 0.09217777277236877
[2025-12-14 15:02:05] 2025-12-14 20:01:32,044 | INFO     | current chi2=0.09217777277236877 (change=16.618165088246766 %)
[2025-12-14 15:02:05] 2025-12-14 20:01:32,044 | INFO     | left removable region: 20
[2025-12-14 15:02:05] 2025-12-14 20:01:32,044 | INFO     | sum of square deviations: 3124858590.0
[2025-12-14 15:02:05] 2025-12-14 20:01:32,045 | INFO     | sum of deviations: 7630222850.499998
[2025-12-14 15:02:05] 2025-12-14 20:01:32,045 | INFO     | mean x: 1765735519.5
[2025-12-14 15:02:05] 2025-12-14 20:01:32,045 | INFO     | mean y: 2488991.921296296
[2025-12-14 15:02:05] 2025-12-14 20:01:32,046 | INFO     | intersect: -4309051873.301787
[2025-12-14 15:02:05] 2025-12-14 20:01:32,046 | INFO     | chi2: 0.0016421435238201168
[2025-12-14 15:02:05] 2025-12-14 20:01:32,046 | INFO     | current memory leak: 2.44 B/s (using 216 data points, chi2=0.00)
[2025-12-14 15:02:05] 2025-12-14 20:01:32,047 | INFO     | could have reported an average CPU frequency of 2546 MHz (12 samples)
[2025-12-14 15:02:05] 2025-12-14 20:01:32,047 | INFO     | ..............................
[2025-12-14 15:02:05] 2025-12-14 20:01:32,047 | INFO     | . Timing measurements:
[2025-12-14 15:02:05] 2025-12-14 20:01:32,047 | INFO     | . get job = 0 s
[2025-12-14 15:02:05] 2025-12-14 20:01:32,048 | INFO     | . initial setup = 2 s
[2025-12-14 15:02:05] 2025-12-14 20:01:32,048 | INFO     | . payload setup = 5 s
[2025-12-14 15:02:05] 2025-12-14 20:01:32,048 | INFO     | . stage-in = 0 s
[2025-12-14 15:02:05] 2025-12-14 20:01:32,048 | INFO     | . payload execution = 14742 s
[2025-12-14 15:02:05] 2025-12-14 20:01:32,048 | INFO     | . stage-out = 2 s
[2025-12-14 15:02:05] 2025-12-14 20:01:32,048 | INFO     | . log creation = 0 s
[2025-12-14 15:02:05] 2025-12-14 20:01:32,049 | INFO     | ..............................
[2025-12-14 15:02:05] 2025-12-14 20:01:32,312 | INFO     | 
[2025-12-14 15:02:05] 2025-12-14 20:01:32,312 | INFO     | job summary report
[2025-12-14 15:02:05] 2025-12-14 20:01:32,312 | INFO     | --------------------------------------------------
[2025-12-14 15:02:05] 2025-12-14 20:01:32,312 | INFO     | PanDA job id: 6929448794
[2025-12-14 15:02:05] 2025-12-14 20:01:32,313 | INFO     | task id: 47898836
[2025-12-14 15:02:05] 2025-12-14 20:01:32,313 | INFO     | errors: (none)
[2025-12-14 15:02:05] 2025-12-14 20:01:32,313 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 15:02:05] 2025-12-14 20:01:32,313 | INFO     | pilot state: finished 
[2025-12-14 15:02:05] 2025-12-14 20:01:32,313 | INFO     | transexitcode: 0
[2025-12-14 15:02:05] 2025-12-14 20:01:32,313 | INFO     | exeerrorcode: 0
[2025-12-14 15:02:05] 2025-12-14 20:01:32,314 | INFO     | exeerrordiag: 
[2025-12-14 15:02:05] 2025-12-14 20:01:32,314 | INFO     | exitcode: 0
[2025-12-14 15:02:05] 2025-12-14 20:01:32,314 | INFO     | exitmsg: OK
[2025-12-14 15:02:05] 2025-12-14 20:01:32,314 | INFO     | cpuconsumptiontime: 112705 s
[2025-12-14 15:02:05] 2025-12-14 20:01:32,314 | INFO     | nevents: 400
[2025-12-14 15:02:05] 2025-12-14 20:01:32,314 | INFO     | neventsw: 0
[2025-12-14 15:02:05] 2025-12-14 20:01:32,315 | INFO     | pid: 2298
[2025-12-14 15:02:05] 2025-12-14 20:01:32,315 | INFO     | pgrp: 2298
[2025-12-14 15:02:05] 2025-12-14 20:01:32,315 | INFO     | corecount: 8
[2025-12-14 15:02:05] 2025-12-14 20:01:32,315 | INFO     | event service: False
[2025-12-14 15:02:05] 2025-12-14 20:01:32,315 | INFO     | sizes: {0: 2284010, 1: 2284010, 4: 2284300, 11: 2284328, 14751: 2315319, 14752: 2315318, 14755: 2324500, 14757: 2324556, 14760: 2324750}
[2025-12-14 15:02:05] 2025-12-14 20:01:32,315 | INFO     | --------------------------------------------------
[2025-12-14 15:02:05] 2025-12-14 20:01:32,320 | INFO     | 
[2025-12-14 15:02:05] 2025-12-14 20:01:32,320 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-14 15:02:05] 2025-12-14 20:01:32,346 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 15:02:05] 2025-12-14 20:01:32,346 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 15:02:05] 2025-12-14 20:01:32,347 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 15:02:05] 2025-12-14 20:01:32,347 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 15:02:05] 2025-12-14 20:01:32,347 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 15:02:05] 2025-12-14 20:01:32,347 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 15:02:05] 2025-12-14 20:01:32,347 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 15:02:05] 2025-12-14 20:01:32,348 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 15:02:05] 2025-12-14 20:01:32,348 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 15:02:05] 2025-12-14 20:01:32,348 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 15:02:05] 2025-12-14 20:01:32,348 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 15:02:05] 2025-12-14 20:01:32,348 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 15:02:05] 2025-12-14 20:01:32,348 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 15:02:05] 2025-12-14 20:01:32,349 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 15:02:05] 2025-12-14 20:01:32,349 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 15:02:05] 2025-12-14 20:01:32,349 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 15:02:05] 2025-12-14 20:01:32,349 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 15:02:05] 2025-12-14 20:01:32,349 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 15:02:05] 2025-12-14 20:01:32,349 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 15:02:05] 2025-12-14 20:01:32,349 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 15:02:05] 2025-12-14 20:01:32,349 | INFO     | job 6929448794 has completed (purged errors)
[2025-12-14 15:02:05] 2025-12-14 20:01:32,349 | INFO     | overall cleanup function is called
[2025-12-14 15:02:05] 2025-12-14 20:01:33,114 | INFO     | PID=28235 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 15:02:05] 2025-12-14 20:01:33,115 | INFO     | .. there are 3 such processes running
[2025-12-14 15:02:05] 2025-12-14 20:01:33,356 | INFO     | --- collectZombieJob: --- 10, [2298]
[2025-12-14 15:02:05] 2025-12-14 20:01:33,356 | INFO     | zombie collector waiting for pid 2298
[2025-12-14 15:02:05] 2025-12-14 20:01:33,356 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 15:02:05] 2025-12-14 20:01:33,356 | INFO     | collected zombie processes
[2025-12-14 15:02:05] 2025-12-14 20:01:33,356 | INFO     | will attempt to kill all subprocesses of pid=2298
[2025-12-14 15:02:05] 2025-12-14 20:01:33,515 | INFO     | process IDs to be killed: [2298] (in reverse order)
[2025-12-14 15:02:05] 2025-12-14 20:01:33,575 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 15:02:05] 2025-12-14 20:01:33,576 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 15:02:05] 2025-12-14 20:01:33,581 | INFO     | did not find any defunct processes belonging to 2298
[2025-12-14 15:02:05] 2025-12-14 20:01:33,586 | INFO     | did not find any defunct processes belonging to 2298
[2025-12-14 15:02:05] 2025-12-14 20:01:33,587 | INFO     | ready for new job
[2025-12-14 15:02:05] 2025-12-14 20:01:33,587 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 15:02:05] 2025-12-14 20:01:33,589 | INFO     | ***************************************
[2025-12-14 15:02:05] 2025-12-14 20:01:33,589 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 15:02:05] 2025-12-14 20:01:33,589 | INFO     | ***************************************
[2025-12-14 15:02:05] 2025-12-14 20:01:33,589 | INFO     | 
[2025-12-14 15:02:05] 2025-12-14 20:01:33,591 | INFO     | architecture information:
[2025-12-14 15:02:05] 2025-12-14 20:01:33,591 | INFO     | executing command: cat /etc/os-release
[2025-12-14 15:02:05] 2025-12-14 20:01:33,603 | INFO     | cat /etc/os-release:
[2025-12-14 15:02:05] NAME="CentOS Linux"
[2025-12-14 15:02:05] VERSION="7 (Core)"
[2025-12-14 15:02:05] ID="centos"
[2025-12-14 15:02:05] ID_LIKE="rhel fedora"
[2025-12-14 15:02:05] VERSION_ID="7"
[2025-12-14 15:02:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 15:02:05] ANSI_COLOR="0;31"
[2025-12-14 15:02:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 15:02:05] HOME_URL="https://www.centos.org/"
[2025-12-14 15:02:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 15:02:05] 
[2025-12-14 15:02:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 15:02:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 15:02:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 15:02:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 15:02:05] 
[2025-12-14 15:02:05] 2025-12-14 20:01:33,604 | INFO     | ***************************************
[2025-12-14 15:02:05] 2025-12-14 20:01:34,108 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-14 15:02:05] 2025-12-14 20:01:34,123 | INFO     | sufficient remaining disk space (28093448192 B)
[2025-12-14 15:02:05] 2025-12-14 20:01:34,123 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 15:02:05] 2025-12-14 20:01:34,124 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 15:02:05] 2025-12-14 20:01:34,124 | INFO     | update_server=False
[2025-12-14 15:02:05] 2025-12-14 20:01:34,124 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 15:02:05] 2025-12-14 20:01:34,124 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 15:02:05] 2025-12-14 20:01:34,194 | INFO     | all payload control threads have been joined
[2025-12-14 15:02:05] 2025-12-14 20:01:34,672 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 15:02:05] 2025-12-14 20:01:34,817 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 15:02:05] 2025-12-14 20:01:34,817 | INFO     | aborting loop
[2025-12-14 15:02:05] 2025-12-14 20:01:34,819 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 15:02:05] 2025-12-14 20:01:34,844 | INFO     | all job control threads have been joined
[2025-12-14 15:02:05] 2025-12-14 20:01:35,129 | INFO     | [job] retrieve thread has finished
[2025-12-14 15:02:05] 2025-12-14 20:01:35,130 | INFO     | [job] queue monitor thread has finished
[2025-12-14 15:02:05] 2025-12-14 20:01:35,200 | INFO     | [payload] control thread has finished
[2025-12-14 15:02:05] 2025-12-14 20:01:35,212 | INFO     | all data control threads have been joined
[2025-12-14 15:02:05] 2025-12-14 20:01:35,522 | INFO     | [job] validate thread has finished
[2025-12-14 15:02:05] 2025-12-14 20:01:35,525 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 15:02:05] 2025-12-14 20:01:35,525 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 15:02:05] 2025-12-14 20:01:35,660 | INFO     | [payload] validate_post thread has finished
[2025-12-14 15:02:05] 2025-12-14 20:01:35,822 | INFO     | [job] job monitor thread has finished
[2025-12-14 15:02:05] 2025-12-14 20:01:35,837 | INFO     | [data] copytool_in thread has finished
[2025-12-14 15:02:05] 2025-12-14 20:01:35,849 | INFO     | [job] control thread has finished
[2025-12-14 15:02:05] 2025-12-14 20:01:36,034 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 15:02:05] 2025-12-14 20:01:36,217 | INFO     | [data] control thread has finished
[2025-12-14 15:02:05] 2025-12-14 20:01:36,381 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 15:02:05] 2025-12-14 20:01:36,491 | INFO     | [payload] failed_post thread has finished
[2025-12-14 15:02:05] 2025-12-14 20:01:36,825 | INFO     | [data] copytool_out thread has finished
[2025-12-14 15:02:05] 2025-12-14 20:01:38,677 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 15:02:05] 2025-12-14 20:01:41,078 | INFO     | [monitor] cgroup control has ended
[2025-12-14 15:02:05] 2025-12-14 20:01:42,083 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139802038122304)>', '<ExcThread(monitor, started 139801336452864)>']
[2025-12-14 15:02:05] 2025-12-14 20:01:47,102 | INFO     | all workflow threads have been joined
[2025-12-14 15:02:05] 2025-12-14 20:01:47,102 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 15:02:05] 2025-12-14 20:01:47,102 | INFO     | traces error code: 0
[2025-12-14 15:02:05] 2025-12-14 20:01:47,103 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 15:02:05] 2025-12-14 20:02:05,300 | INFO     | PID=28235 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 15:02:05] 2025-12-14 20:02:05,301 | INFO     | .. there are 3 such processes running
[2025-12-14 15:02:05] 2025-12-14 20:02:05,301 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 15:02:05] 2025-12-14 20:02:05,301 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 15:02:05] 2025-12-14 20:02:05,301 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 15:02:05] 2025-12-14 20:02:05,301 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 15:02:05] 2025-12-14 20:02:05,301 | INFO     | [monitor] control thread has ended
[2025-12-14 15:02:05] 2025-12-14 20:02:05,406 [wrapper] ==== pilot stdout END ====
[2025-12-14 15:02:05] 2025-12-14 20:02:05,409 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 15:02:05] 2025-12-14 20:02:05,411 [wrapper] pilotpid: 28235
[2025-12-14 15:02:05] 2025-12-14 20:02:05,414 [wrapper] Pilot exit status: 0
[2025-12-14 15:02:05] 2025-12-14 20:02:05,422 [wrapper] pandaids: 6929448794
[2025-12-14 15:02:05] 2025-12-14 20:02:05,454 [wrapper] cleanup supervisor_pilot 23763 28236
[2025-12-14 15:02:05] 2025-12-14 20:02:05,456 [wrapper] Test setup, not cleaning
[2025-12-14 15:02:05] 2025-12-14 20:02:05,458 [wrapper] apfmon messages muted
[2025-12-14 15:02:05] 2025-12-14 20:02:05,460 [wrapper] ==== wrapper stdout END ====
[2025-12-14 15:02:05] 2025-12-14 20:02:05,462 [wrapper] ==== wrapper stderr END ====
[2025-12-14 15:02:05]  *** Error codes and diagnostics ***
[2025-12-14 15:02:05]     "exeErrorCode": 0,
[2025-12-14 15:02:05]     "exeErrorDiag": "",
[2025-12-14 15:02:05]     "pilotErrorCode": 0,
[2025-12-14 15:02:05]     "pilotErrorDiag": "",
[2025-12-14 15:02:05]  *** Listing of results directory ***
[2025-12-14 15:02:05] total 416936
[2025-12-14 15:02:05] -rwx------ 1 boincer umatlas     36322 Dec 14 06:00 runpilot2-wrapper.sh
[2025-12-14 15:02:05] -rw-r--r-- 1 boincer umatlas    579449 Dec 14 06:00 pilot3.tar.gz
[2025-12-14 15:02:05] -rw-r--r-- 1 boincer umatlas      5112 Dec 14 06:01 queuedata.json
[2025-12-14 15:02:05] -rw-r--r-- 1 boincer umatlas       100 Dec 14 10:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 15:02:05] -rwxr-xr-x 1 boincer umatlas      7986 Dec 14 10:55 run_atlas
[2025-12-14 15:02:05] -rw-r--r-- 1 boincer umatlas       105 Dec 14 10:55 job.xml
[2025-12-14 15:02:05] -rw-r--r-- 2 boincer umatlas 215059057 Dec 14 10:55 EVNT.47898833._000130.pool.root.1
[2025-12-14 15:02:05] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 10:55 start_atlas.sh
[2025-12-14 15:02:05] drwxrwx--x 2 boincer umatlas      4096 Dec 14 10:55 shared
[2025-12-14 15:02:05] -rw-r--r-- 2 boincer umatlas    592403 Dec 14 10:55 input.tar.gz
[2025-12-14 15:02:05] -rw-r--r-- 1 boincer umatlas         0 Dec 14 10:55 boinc_lockfile
[2025-12-14 15:02:05] -rw-r--r-- 1 boincer umatlas      2552 Dec 14 10:55 pandaJob.out
[2025-12-14 15:02:05] -rw------- 1 boincer umatlas        57 Dec 14 10:55 setup.sh.local
[2025-12-14 15:02:05] -rw------- 1 boincer umatlas    991032 Dec 14 10:55 agis_schedconf.cvmfs.json
[2025-12-14 15:02:05] drwx------ 5 boincer umatlas      4096 Dec 14 10:55 pilot3
[2025-12-14 15:02:05] -rw------- 1 boincer umatlas 202906890 Dec 14 15:00 HITS.47898836._003242.pool.root.1
[2025-12-14 15:02:05] -rw-r--r-- 1 boincer umatlas       532 Dec 14 15:00 boinc_task_state.xml
[2025-12-14 15:02:05] -rw------- 1 boincer umatlas        95 Dec 14 15:01 pilot_heartbeat.json
[2025-12-14 15:02:05] -rw-r--r-- 1 boincer umatlas      5952 Dec 14 15:01 init_data.xml
[2025-12-14 15:02:05] -rw------- 1 boincer umatlas      1055 Dec 14 15:01 memory_monitor_summary.json
[2025-12-14 15:02:05] -rw------- 1 boincer umatlas   1516240 Dec 14 15:01 agis_ddmendpoints.agis.ALL.json
[2025-12-14 15:02:05] -rw------- 1 boincer umatlas    474334 Dec 14 15:01 log.47898836._003242.job.log.tgz.1
[2025-12-14 15:02:05] -rw------- 1 boincer umatlas      7856 Dec 14 15:01 heartbeat.json
[2025-12-14 15:02:05] -rw-r--r-- 1 boincer umatlas      8192 Dec 14 15:01 boinc_mmap_file
[2025-12-14 15:02:05] -rw-r--r-- 1 boincer umatlas        29 Dec 14 15:01 wrapper_checkpoint.txt
[2025-12-14 15:02:05] -rw------- 1 boincer umatlas       820 Dec 14 15:02 pilotlog.txt
[2025-12-14 15:02:05] -rw------- 1 boincer umatlas   2060851 Dec 14 15:02 log.47898836._003242.job.log.1
[2025-12-14 15:02:05] -rw------- 1 boincer umatlas       357 Dec 14 15:02 output.list
[2025-12-14 15:02:05] -rw-r--r-- 1 boincer umatlas       620 Dec 14 15:02 runtime_log
[2025-12-14 15:02:05] -rw------- 1 boincer umatlas   2549760 Dec 14 15:02 result.tar.gz
[2025-12-14 15:02:05] -rw-r--r-- 1 boincer umatlas      9343 Dec 14 15:02 runtime_log.err
[2025-12-14 15:02:05] -rw------- 1 boincer umatlas       663 Dec 14 15:02 j0TMDmN1yo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJDRKDmHQjhCo.diag
[2025-12-14 15:02:05] -rw-r--r-- 1 boincer umatlas     21500 Dec 14 15:02 stderr.txt
[2025-12-14 15:02:05] HITS file was successfully produced:
[2025-12-14 15:02:05] -rw------- 1 boincer umatlas 202906890 Dec 14 15:00 shared/HITS.pool.root.1
[2025-12-14 15:02:05]  *** Contents of shared directory: ***
[2025-12-14 15:02:05] total 411264
[2025-12-14 15:02:05] -rw-r--r-- 2 boincer umatlas 215059057 Dec 14 10:55 ATLAS.root_0
[2025-12-14 15:02:05] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 10:55 start_atlas.sh
[2025-12-14 15:02:05] -rw-r--r-- 2 boincer umatlas    592403 Dec 14 10:55 input.tar.gz
[2025-12-14 15:02:05] -rw------- 1 boincer umatlas 202906890 Dec 14 15:00 HITS.pool.root.1
[2025-12-14 15:02:05] -rw------- 1 boincer umatlas   2549760 Dec 14 15:02 result.tar.gz
15:02:07 (24564): run_atlas exited; CPU time 112911.463719
15:02:07 (24564): called boinc_finish(0)

</stderr_txt>
]]>

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