Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:48:58 (2817153): wrapper (7.7.26015): starting
18:48:58 (2817153): wrapper: running run_atlas (--nthreads 3)
[2025-12-14 18:48:58] Arguments: --nthreads 3
[2025-12-14 18:48:58] Threads: 3
[2025-12-14 18:48:58] Checking for CVMFS
[2025-12-14 18:48:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 18:48:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 18:48:58] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 18:48:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 18:48:58] 2.9.2.0 2238870 2232 78968 154003 3 57 20739078 36864001 0 130560 0 1528924 99.990 77824 16199 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-14 18:48:58] CVMFS is ok
[2025-12-14 18:48:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 18:48:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 18:48:58] Further information can be found at the LHC@home message board.
[2025-12-14 18:48:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 18:48:58] Checking for apptainer binary...
[2025-12-14 18:48:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 18:48:58] Running /usr/bin/apptainer --version
[2025-12-14 18:48:58] apptainer version 1.4.1-1.1
[2025-12-14 18:48:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 18:48:58] magicA161a
[2025-12-14 18:48:58] apptainer works
[2025-12-14 18:48:58] Set ATHENA_PROC_NUMBER=3
[2025-12-14 18:48:58] Set ATHENA_CORE_NUMBER=3
[2025-12-14 18:48:58] Starting ATLAS job with PandaID=6929448555
[2025-12-14 18:48:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 20:36:16]  *** The last 200 lines of the pilot log: ***
[2025-12-14 20:36:16] 2025-12-14 19:35:14,818 | INFO     | [payload] validate_post thread has finished
[2025-12-14 20:36:16] 2025-12-14 19:35:14,860 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 20:36:16] 2025-12-14 19:35:14,870 | INFO     | [data] copytool_out thread has finished
[2025-12-14 20:36:16] 2025-12-14 19:35:15,390 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 20:36:16] 2025-12-14 19:35:19,397 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 20:36:16] 2025-12-14 19:35:23,065 | INFO     | job.realtimelogging is not enabled
[2025-12-14 20:36:16] 2025-12-14 19:35:24,071 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 20:36:16] 2025-12-14 19:35:42,941 | INFO     | PID=2820874 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 20:36:16] 2025-12-14 19:35:42,941 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 20:36:16] 2025-12-14 19:35:42,941 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 20:36:16] 2025-12-14 19:35:42,941 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 20:36:16] 2025-12-14 19:36:10,444 | INFO     | [monitor] cgroup control has ended
[2025-12-14 20:36:16] 2025-12-14 19:36:11,422 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140579192141632)>', '<ExcThread(monitor, started 140578557777664)>']
[2025-12-14 20:36:16] 2025-12-14 19:36:12,096 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 20:36:16] 2025-12-14 19:36:12,096 | INFO     | [monitor] control thread has ended
[2025-12-14 20:36:16] 2025-12-14 19:36:16,448 | INFO     | all workflow threads have been joined
[2025-12-14 20:36:16] 2025-12-14 19:36:16,448 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 20:36:16] 2025-12-14 19:36:16,448 | INFO     | traces error code: 0
[2025-12-14 20:36:16] 2025-12-14 19:36:16,448 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 20:36:16] 2025-12-14 19:36:16,497 [wrapper] ==== pilot stdout END ====
[2025-12-14 20:36:16] 2025-12-14 19:36:16,499 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 20:36:16] 2025-12-14 19:36:16,502 [wrapper] pilotpid: 2820874
[2025-12-14 20:36:16] 2025-12-14 19:36:16,504 [wrapper] Pilot exit status: 0
[2025-12-14 20:36:16] 2025-12-14 19:36:16,511 [wrapper] pandaids: 6929448555
[2025-12-14 20:36:16] 2025-12-14 19:36:16,528 [wrapper] cleanup supervisor_pilot 2841817 2820875
[2025-12-14 20:36:16] 2025-12-14 19:36:16,530 [wrapper] Test setup, not cleaning
[2025-12-14 20:36:16] 2025-12-14 19:36:16,533 [wrapper] apfmon messages muted
[2025-12-14 20:36:16] 2025-12-14 19:36:16,535 [wrapper] ==== wrapper stdout END ====
[2025-12-14 20:36:16] 2025-12-14 19:36:16,537 [wrapper] ==== wrapper stderr END ====
[2025-12-14 20:36:16]  *** Error codes and diagnostics ***
[2025-12-14 20:36:16]     "exeErrorCode": 0,
[2025-12-14 20:36:16]     "exeErrorDiag": "",
[2025-12-14 20:36:16]     "pilotErrorCode": 0,
[2025-12-14 20:36:16]     "pilotErrorDiag": "",
[2025-12-14 20:36:16]  *** Listing of results directory ***
[2025-12-14 20:36:16] total 407176
[2025-12-14 20:36:16] -rwx------ 1 boinc boinc     36322 Dec 14 12:00 runpilot2-wrapper.sh
[2025-12-14 20:36:16] -rw-r--r-- 1 boinc boinc    579449 Dec 14 12:00 pilot3.tar.gz
[2025-12-14 20:36:16] -rw-r--r-- 1 boinc boinc      5112 Dec 14 12:01 queuedata.json
[2025-12-14 20:36:16] -rw-r--r-- 1 boinc boinc       100 Dec 14 18:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 20:36:16] -rwxr-xr-x 1 boinc boinc      7986 Dec 14 18:48 run_atlas
[2025-12-14 20:36:16] -rw-r--r-- 1 boinc boinc       105 Dec 14 18:48 job.xml
[2025-12-14 20:36:16] -rw-r--r-- 2 boinc boinc 215386852 Dec 14 18:48 EVNT.47898833._000120.pool.root.1
[2025-12-14 20:36:16] -rw-r--r-- 2 boinc boinc    592402 Dec 14 18:48 input.tar.gz
[2025-12-14 20:36:16] -rw-r--r-- 2 boinc boinc     15847 Dec 14 18:48 start_atlas.sh
[2025-12-14 20:36:16] drwxrwx--x 2 boinc boinc      4096 Dec 14 18:48 shared
[2025-12-14 20:36:16] -rw-r--r-- 1 boinc boinc         0 Dec 14 18:48 boinc_setup_complete
[2025-12-14 20:36:16] -rw-r--r-- 1 boinc boinc      6448 Dec 14 18:48 init_data.xml
[2025-12-14 20:36:16] -rw-r--r-- 1 boinc boinc         0 Dec 14 18:48 boinc_lockfile
[2025-12-14 20:36:16] -rw-r--r-- 1 boinc boinc      2552 Dec 14 18:48 pandaJob.out
[2025-12-14 20:36:16] -rw------- 1 boinc boinc    991024 Dec 14 18:49 agis_schedconf.cvmfs.json
[2025-12-14 20:36:16] -rw------- 1 boinc boinc   1516240 Dec 14 18:49 agis_ddmendpoints.agis.ALL.json
[2025-12-14 20:36:16] drwx------ 5 boinc boinc      4096 Dec 14 18:49 pilot3
[2025-12-14 20:36:16] -rw------- 1 boinc boinc 195241282 Dec 14 20:34 HITS.47898836._003003.pool.root.1
[2025-12-14 20:36:16] -rw-r--r-- 1 boinc boinc       529 Dec 14 20:34 boinc_task_state.xml
[2025-12-14 20:36:16] -rw------- 1 boinc boinc      1016 Dec 14 20:35 memory_monitor_summary.json
[2025-12-14 20:36:16] -rw------- 1 boinc boinc    289069 Dec 14 20:35 log.47898836._003003.job.log.tgz.1
[2025-12-14 20:36:16] -rw------- 1 boinc boinc      7755 Dec 14 20:35 heartbeat.json
[2025-12-14 20:36:16] -rw------- 1 boinc boinc        95 Dec 14 20:35 pilot_heartbeat.json
[2025-12-14 20:36:16] -rw-r--r-- 1 boinc boinc      8192 Dec 14 20:36 boinc_mmap_file
[2025-12-14 20:36:16] -rw-r--r-- 1 boinc boinc        27 Dec 14 20:36 wrapper_checkpoint.txt
[2025-12-14 20:36:16] -rw------- 1 boinc boinc      5010 Dec 14 20:36 pilotlog.txt
[2025-12-14 20:36:16] -rw------- 1 boinc boinc    922415 Dec 14 20:36 log.47898836._003003.job.log.1
[2025-12-14 20:36:16] -rw------- 1 boinc boinc       357 Dec 14 20:36 output.list
[2025-12-14 20:36:16] -rw-r--r-- 1 boinc boinc       620 Dec 14 20:36 runtime_log
[2025-12-14 20:36:16] -rw------- 1 boinc boinc   1228800 Dec 14 20:36 result.tar.gz
[2025-12-14 20:36:16] -rw-r--r-- 1 boinc boinc      8917 Dec 14 20:36 runtime_log.err
[2025-12-14 20:36:16] -rw------- 1 boinc boinc       663 Dec 14 20:36 TQKMDmE1yo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjCRKDmuTru3n.diag
[2025-12-14 20:36:16] -rw-r--r-- 1 boinc boinc      5455 Dec 14 20:36 stderr.txt
[2025-12-14 20:36:16] HITS file was successfully produced:
[2025-12-14 20:36:16] -rw------- 1 boinc boinc 195241282 Dec 14 20:34 shared/HITS.pool.root.1
[2025-12-14 20:36:16]  *** Contents of shared directory: ***
[2025-12-14 20:36:16] total 402812
[2025-12-14 20:36:16] -rw-r--r-- 2 boinc boinc 215386852 Dec 14 18:48 ATLAS.root_0
[2025-12-14 20:36:16] -rw-r--r-- 2 boinc boinc    592402 Dec 14 18:48 input.tar.gz
[2025-12-14 20:36:16] -rw-r--r-- 2 boinc boinc     15847 Dec 14 18:48 start_atlas.sh
[2025-12-14 20:36:16] -rw------- 1 boinc boinc 195241282 Dec 14 20:34 HITS.pool.root.1
[2025-12-14 20:36:16] -rw------- 1 boinc boinc   1228800 Dec 14 20:36 result.tar.gz
20:36:18 (2817153): run_atlas exited; CPU time 18410.241188
20:36:18 (2817153): called boinc_finish(0)

</stderr_txt>
]]>

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