Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:23:17 (390023): wrapper (7.7.26015): starting
01:23:17 (390023): wrapper: running run_atlas (--nthreads 3)
[2025-12-15 01:23:17] Arguments: --nthreads 3
[2025-12-15 01:23:17] Threads: 3
[2025-12-15 01:23:17] Checking for CVMFS
[2025-12-15 01:23:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 01:23:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 01:23:17] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 01:23:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 01:23:17] 2.9.2.0 3857183 2779 81184 154013 2 56 13383469 36864001 0 130560 0 1919569 99.990 98310 21554 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-15 01:23:17] CVMFS is ok
[2025-12-15 01:23:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 01:23:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 01:23:17] Further information can be found at the LHC@home message board.
[2025-12-15 01:23:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 01:23:17] Checking for apptainer binary...
[2025-12-15 01:23:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 01:23:17] Running /usr/bin/apptainer --version
[2025-12-15 01:23:17] apptainer version 1.4.1-1.1
[2025-12-15 01:23:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 01:23:18] thA325a
[2025-12-15 01:23:18] apptainer works
[2025-12-15 01:23:18] Set ATHENA_PROC_NUMBER=3
[2025-12-15 01:23:18] Set ATHENA_CORE_NUMBER=3
[2025-12-15 01:23:18] Starting ATLAS job with PandaID=6929302463
[2025-12-15 01:23:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 03:18:39]  *** The last 200 lines of the pilot log: ***
[2025-12-15 03:18:39] 2025-12-15 02:18:08,171 | INFO     | did not find any defunct processes belonging to 400185
[2025-12-15 03:18:39] 2025-12-15 02:18:08,172 | INFO     | did not find any defunct processes belonging to 400185
[2025-12-15 03:18:39] 2025-12-15 02:18:08,172 | INFO     | ready for new job
[2025-12-15 03:18:39] 2025-12-15 02:18:08,172 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 03:18:39] 2025-12-15 02:18:08,173 | INFO     | ***************************************
[2025-12-15 03:18:39] 2025-12-15 02:18:08,173 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 03:18:39] 2025-12-15 02:18:08,173 | INFO     | ***************************************
[2025-12-15 03:18:39] 2025-12-15 02:18:08,173 | INFO     | 
[2025-12-15 03:18:39] 2025-12-15 02:18:08,173 | INFO     | architecture information:
[2025-12-15 03:18:39] 2025-12-15 02:18:08,173 | INFO     | executing command: cat /etc/os-release
[2025-12-15 03:18:39] 2025-12-15 02:18:08,182 | INFO     | cat /etc/os-release:
[2025-12-15 03:18:39] NAME="CentOS Linux"
[2025-12-15 03:18:39] VERSION="7 (Core)"
[2025-12-15 03:18:39] ID="centos"
[2025-12-15 03:18:39] ID_LIKE="rhel fedora"
[2025-12-15 03:18:39] VERSION_ID="7"
[2025-12-15 03:18:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 03:18:39] ANSI_COLOR="0;31"
[2025-12-15 03:18:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 03:18:39] HOME_URL="https://www.centos.org/"
[2025-12-15 03:18:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 03:18:39] 
[2025-12-15 03:18:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 03:18:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 03:18:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 03:18:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 03:18:39] 
[2025-12-15 03:18:39] 2025-12-15 02:18:08,182 | INFO     | ***************************************
[2025-12-15 03:18:39] 2025-12-15 02:18:08,685 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-15 03:18:39] 2025-12-15 02:18:08,697 | INFO     | sufficient remaining disk space (246751952896 B)
[2025-12-15 03:18:39] 2025-12-15 02:18:08,698 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 03:18:39] 2025-12-15 02:18:08,698 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 03:18:39] 2025-12-15 02:18:08,698 | INFO     | update_server=False
[2025-12-15 03:18:39] 2025-12-15 02:18:08,698 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 03:18:39] 2025-12-15 02:18:08,698 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 03:18:39] 2025-12-15 02:18:08,698 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 03:18:39] 2025-12-15 02:18:08,915 | INFO     | all data control threads have been joined
[2025-12-15 03:18:39] 2025-12-15 02:18:09,307 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 03:18:39] 2025-12-15 02:18:09,308 | INFO     | aborting loop
[2025-12-15 03:18:39] 2025-12-15 02:18:09,704 | INFO     | [job] retrieve thread has finished
[2025-12-15 03:18:39] 2025-12-15 02:18:09,704 | INFO     | [job] queue monitor thread has finished
[2025-12-15 03:18:39] 2025-12-15 02:18:09,704 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 03:18:39] 2025-12-15 02:18:09,921 | INFO     | [data] control thread has finished
[2025-12-15 03:18:39] 2025-12-15 02:18:09,938 | INFO     | all job control threads have been joined
[2025-12-15 03:18:39] 2025-12-15 02:18:09,975 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 03:18:39] 2025-12-15 02:18:10,098 | INFO     | all payload control threads have been joined
[2025-12-15 03:18:39] 2025-12-15 02:18:10,313 | INFO     | [job] job monitor thread has finished
[2025-12-15 03:18:39] 2025-12-15 02:18:10,579 | INFO     | [data] copytool_in thread has finished
[2025-12-15 03:18:39] 2025-12-15 02:18:10,607 | INFO     | [payload] validate_post thread has finished
[2025-12-15 03:18:39] 2025-12-15 02:18:10,704 | INFO     | [data] copytool_out thread has finished
[2025-12-15 03:18:39] 2025-12-15 02:18:10,944 | INFO     | [job] control thread has finished
[2025-12-15 03:18:39] 2025-12-15 02:18:11,035 | INFO     | [payload] failed_post thread has finished
[2025-12-15 03:18:39] 2025-12-15 02:18:11,104 | INFO     | [payload] control thread has finished
[2025-12-15 03:18:39] 2025-12-15 02:18:11,138 | INFO     | [job] validate thread has finished
[2025-12-15 03:18:39] 2025-12-15 02:18:11,163 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 03:18:39] 2025-12-15 02:18:12,126 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 03:18:39] 2025-12-15 02:18:16,132 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 03:18:39] 2025-12-15 02:18:19,526 | INFO     | job.realtimelogging is not enabled
[2025-12-15 03:18:39] 2025-12-15 02:18:20,532 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 03:18:39] 2025-12-15 02:18:31,102 | INFO     | [monitor] cgroup control has ended
[2025-12-15 03:18:39] 2025-12-15 02:18:32,544 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140671532914496)>', '<ExcThread(monitor, started 140671033792256)>']
[2025-12-15 03:18:39] 2025-12-15 02:18:37,570 | INFO     | all workflow threads have been joined
[2025-12-15 03:18:39] 2025-12-15 02:18:37,570 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 03:18:39] 2025-12-15 02:18:37,570 | INFO     | traces error code: 0
[2025-12-15 03:18:39] 2025-12-15 02:18:37,570 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 03:18:39] 2025-12-15 02:18:39,372 | INFO     | PID=393745 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-15 03:18:39] 2025-12-15 02:18:39,372 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 03:18:39] 2025-12-15 02:18:39,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 03:18:39] 2025-12-15 02:18:39,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 03:18:39] 2025-12-15 02:18:39,372 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 03:18:39] 2025-12-15 02:18:39,372 | INFO     | [monitor] control thread has ended
[2025-12-15 03:18:39] 2025-12-15 02:18:39,418 [wrapper] ==== pilot stdout END ====
[2025-12-15 03:18:39] 2025-12-15 02:18:39,421 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 03:18:39] 2025-12-15 02:18:39,423 [wrapper] pilotpid: 393745
[2025-12-15 03:18:39] 2025-12-15 02:18:39,425 [wrapper] Pilot exit status: 0
[2025-12-15 03:18:39] 2025-12-15 02:18:39,432 [wrapper] pandaids: 6929302463
[2025-12-15 03:18:39] 2025-12-15 02:18:39,448 [wrapper] cleanup supervisor_pilot  414813 393746
[2025-12-15 03:18:39] 2025-12-15 02:18:39,450 [wrapper] Test setup, not cleaning
[2025-12-15 03:18:39] 2025-12-15 02:18:39,452 [wrapper] apfmon messages muted
[2025-12-15 03:18:39] 2025-12-15 02:18:39,455 [wrapper] ==== wrapper stdout END ====
[2025-12-15 03:18:39] 2025-12-15 02:18:39,457 [wrapper] ==== wrapper stderr END ====
[2025-12-15 03:18:39]  *** Error codes and diagnostics ***
[2025-12-15 03:18:39]     "exeErrorCode": 0,
[2025-12-15 03:18:39]     "exeErrorDiag": "",
[2025-12-15 03:18:39]     "pilotErrorCode": 0,
[2025-12-15 03:18:39]     "pilotErrorDiag": "",
[2025-12-15 03:18:39]  *** Listing of results directory ***
[2025-12-15 03:18:39] total 439208
[2025-12-15 03:18:39] -rw-r--r-- 1 boinc boinc    579449 Dec 13 12:35 pilot3.tar.gz
[2025-12-15 03:18:39] -rwx------ 1 boinc boinc     36322 Dec 13 12:37 runpilot2-wrapper.sh
[2025-12-15 03:18:39] -rw-r--r-- 1 boinc boinc      5112 Dec 13 12:38 queuedata.json
[2025-12-15 03:18:39] -rw-r--r-- 1 boinc boinc       100 Dec 15 01:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 03:18:39] -rwxr-xr-x 1 boinc boinc      7986 Dec 15 01:23 run_atlas
[2025-12-15 03:18:39] -rw-r--r-- 1 boinc boinc       105 Dec 15 01:23 job.xml
[2025-12-15 03:18:39] -rw-r--r-- 2 boinc boinc 223655531 Dec 15 01:23 EVNT.47898761._000254.pool.root.1
[2025-12-15 03:18:39] -rw-r--r-- 2 boinc boinc    592399 Dec 15 01:23 input.tar.gz
[2025-12-15 03:18:39] -rw-r--r-- 2 boinc boinc     15847 Dec 15 01:23 start_atlas.sh
[2025-12-15 03:18:39] drwxrwx--x 2 boinc boinc      4096 Dec 15 01:23 shared
[2025-12-15 03:18:39] -rw-r--r-- 1 boinc boinc         0 Dec 15 01:23 boinc_setup_complete
[2025-12-15 03:18:39] -rw-r--r-- 1 boinc boinc      6440 Dec 15 01:23 init_data.xml
[2025-12-15 03:18:39] -rw-r--r-- 1 boinc boinc         0 Dec 15 01:23 boinc_lockfile
[2025-12-15 03:18:39] -rw-r--r-- 1 boinc boinc      2504 Dec 15 01:23 pandaJob.out
[2025-12-15 03:18:39] -rw------- 1 boinc boinc    991024 Dec 15 01:23 agis_schedconf.cvmfs.json
[2025-12-15 03:18:39] -rw------- 1 boinc boinc   1516240 Dec 15 01:23 agis_ddmendpoints.agis.ALL.json
[2025-12-15 03:18:39] drwx------ 5 boinc boinc      4096 Dec 15 01:23 pilot3
[2025-12-15 03:18:39] -rw------- 1 boinc boinc 219653692 Dec 15 03:17 HITS.47898763._004458.pool.root.1
[2025-12-15 03:18:39] -rw-r--r-- 1 boinc boinc       529 Dec 15 03:17 boinc_task_state.xml
[2025-12-15 03:18:39] -rw------- 1 boinc boinc      1021 Dec 15 03:17 memory_monitor_summary.json
[2025-12-15 03:18:39] -rw------- 1 boinc boinc        95 Dec 15 03:17 pilot_heartbeat.json
[2025-12-15 03:18:39] -rw------- 1 boinc boinc    277124 Dec 15 03:18 log.47898763._004458.job.log.tgz.1
[2025-12-15 03:18:39] -rw------- 1 boinc boinc      7758 Dec 15 03:18 heartbeat.json
[2025-12-15 03:18:39] -rw-r--r-- 1 boinc boinc      8192 Dec 15 03:18 boinc_mmap_file
[2025-12-15 03:18:39] -rw-r--r-- 1 boinc boinc        27 Dec 15 03:18 wrapper_checkpoint.txt
[2025-12-15 03:18:39] -rw------- 1 boinc boinc       746 Dec 15 03:18 pilotlog.txt
[2025-12-15 03:18:39] -rw------- 1 boinc boinc    991615 Dec 15 03:18 log.47898763._004458.job.log.1
[2025-12-15 03:18:39] -rw------- 1 boinc boinc       357 Dec 15 03:18 output.list
[2025-12-15 03:18:39] -rw-r--r-- 1 boinc boinc       620 Dec 15 03:18 runtime_log
[2025-12-15 03:18:39] -rw------- 1 boinc boinc   1290240 Dec 15 03:18 result.tar.gz
[2025-12-15 03:18:39] -rw-r--r-- 1 boinc boinc      8902 Dec 15 03:18 runtime_log.err
[2025-12-15 03:18:39] -rw------- 1 boinc boinc       660 Dec 15 03:18 FwfMDmF7co8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdBPKDm4QJgIo.diag
[2025-12-15 03:18:39] -rw-r--r-- 1 boinc boinc      9845 Dec 15 03:18 stderr.txt
[2025-12-15 03:18:39] HITS file was successfully produced:
[2025-12-15 03:18:39] -rw------- 1 boinc boinc 219653692 Dec 15 03:17 shared/HITS.pool.root.1
[2025-12-15 03:18:39]  *** Contents of shared directory: ***
[2025-12-15 03:18:39] total 434788
[2025-12-15 03:18:39] -rw-r--r-- 2 boinc boinc 223655531 Dec 15 01:23 ATLAS.root_0
[2025-12-15 03:18:39] -rw-r--r-- 2 boinc boinc    592399 Dec 15 01:23 input.tar.gz
[2025-12-15 03:18:39] -rw-r--r-- 2 boinc boinc     15847 Dec 15 01:23 start_atlas.sh
[2025-12-15 03:18:39] -rw------- 1 boinc boinc 219653692 Dec 15 03:17 HITS.pool.root.1
[2025-12-15 03:18:39] -rw------- 1 boinc boinc   1290240 Dec 15 03:18 result.tar.gz
03:18:41 (390023): run_atlas exited; CPU time 19892.887094
03:18:41 (390023): called boinc_finish(0)

</stderr_txt>
]]>

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