Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:20:41 (28655): wrapper (7.7.26015): starting
22:20:41 (28655): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 22:20:41] Arguments: --nthreads 8
[2025-12-14 22:20:41] Threads: 8
[2025-12-14 22:20:41] Checking for CVMFS
[2025-12-14 22:20:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 22:20:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 22:20:42] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 22:20:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 22:20:43] 2.11.2.0 31726 311660 141964 154008 0 244 15778793 25165825 3775 130560 9 152629413 99.870 86000529 2576 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-14 22:20:43] CVMFS is ok
[2025-12-14 22:20:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 22:20:43] Checking for apptainer binary...
[2025-12-14 22:20:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 22:20:43] Running /usr/bin/apptainer --version
[2025-12-14 22:20:43] apptainer version 1.3.2-1.el7
[2025-12-14 22:20:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 22:20:46] cg-vwn427.simple-grid.lan
[2025-12-14 22:20:46] apptainer works
[2025-12-14 22:20:46] Set ATHENA_PROC_NUMBER=8
[2025-12-14 22:20:46] Set ATHENA_CORE_NUMBER=8
[2025-12-14 22:20:46] Starting ATLAS job with PandaID=6929334891
[2025-12-14 22:20:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 04:20:44]  *** The last 200 lines of the pilot log: ***
[2025-12-15 04:20:45] 2025-12-15 03:19:54,241 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 04:20:45] 2025-12-15 03:19:54,870 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-15 04:20:45] 2025-12-15 03:19:54,871 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-15 04:20:45] 2025-12-15 03:19:54,877 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6929334891/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 04:20:45] 2025-12-15 03:19:54,877 | INFO     | extracted standard info from prmon json
[2025-12-15 04:20:45] 2025-12-15 03:19:54,877 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 04:20:45] 2025-12-15 03:19:54,878 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 04:20:45] 2025-12-15 03:19:54,878 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 04:20:45] 2025-12-15 03:19:54,878 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 04:20:45] 2025-12-15 03:19:54,885 | INFO     | fitting pss+swap vs Time
[2025-12-15 04:20:45] 2025-12-15 03:19:54,886 | INFO     | sum of square deviations: 12403750705.5
[2025-12-15 04:20:45] 2025-12-15 03:19:54,893 | INFO     | sum of deviations: 53209564553.5
[2025-12-15 04:20:45] 2025-12-15 03:19:54,894 | INFO     | mean x: 1765758269.5
[2025-12-15 04:20:45] 2025-12-15 03:19:54,894 | INFO     | mean y: 2482935.0555555555
[2025-12-15 04:20:45] 2025-12-15 03:19:54,894 | INFO     | intersect: -7572260451.6505
[2025-12-15 04:20:45] 2025-12-15 03:19:54,894 | INFO     | chi2: 5.186910883588979
[2025-12-15 04:20:45] 2025-12-15 03:19:54,895 | INFO     | sum of square deviations: 11867638328.0
[2025-12-15 04:20:45] 2025-12-15 03:19:54,899 | INFO     | sum of deviations: 74935203498.99998
[2025-12-15 04:20:45] 2025-12-15 03:19:54,899 | INFO     | mean x: 1765758117.0
[2025-12-15 04:20:45] 2025-12-15 03:19:54,899 | INFO     | mean y: 2489039.3679525224
[2025-12-15 04:20:45] 2025-12-15 03:19:54,899 | INFO     | intersect: -11146944417.432117
[2025-12-15 04:20:45] 2025-12-15 03:19:54,903 | INFO     | chi2: 4.446768023202567
[2025-12-15 04:20:45] 2025-12-15 03:19:54,903 | INFO     | current chi2=4.446768023202567 (change=14.269434678898616 %)
[2025-12-15 04:20:45] 2025-12-15 03:19:54,903 | INFO     | right removable region: 336
[2025-12-15 04:20:45] 2025-12-15 03:19:54,904 | INFO     | sum of square deviations: 11867638328.0
[2025-12-15 04:20:45] 2025-12-15 03:19:54,907 | INFO     | sum of deviations: -54666736183.0
[2025-12-15 04:20:45] 2025-12-15 03:19:54,908 | INFO     | mean x: 1765758422.0
[2025-12-15 04:20:45] 2025-12-15 03:19:54,908 | INFO     | mean y: 2513590.4332344215
[2025-12-15 04:20:45] 2025-12-15 03:19:54,908 | INFO     | intersect: 8136250661.830139
[2025-12-15 04:20:45] 2025-12-15 03:19:54,909 | INFO     | chi2: 1.455589266629297
[2025-12-15 04:20:45] 2025-12-15 03:19:54,909 | INFO     | current chi2=1.455589266629297 (change=71.93726093820739 %)
[2025-12-15 04:20:45] 2025-12-15 03:19:54,909 | INFO     | sum of square deviations: 11347200663.0
[2025-12-15 04:20:45] 2025-12-15 03:19:54,913 | INFO     | sum of deviations: -82710345056.0
[2025-12-15 04:20:45] 2025-12-15 03:19:54,913 | INFO     | mean x: 1765758574.5
[2025-12-15 04:20:45] 2025-12-15 03:19:54,913 | INFO     | mean y: 2521752.93373494
[2025-12-15 04:20:45] 2025-12-15 03:19:54,913 | INFO     | intersect: 12873229279.830818
[2025-12-15 04:20:45] 2025-12-15 03:19:54,914 | INFO     | chi2: 0.9961142896170139
[2025-12-15 04:20:45] 2025-12-15 03:19:54,914 | INFO     | current chi2=0.9961142896170139 (change=31.56625207028957 %)
[2025-12-15 04:20:45] 2025-12-15 03:19:54,915 | INFO     | sum of square deviations: 10842205148.0
[2025-12-15 04:20:45] 2025-12-15 03:19:54,918 | INFO     | sum of deviations: -77632152091.0
[2025-12-15 04:20:45] 2025-12-15 03:19:54,919 | INFO     | mean x: 1765758727.0
[2025-12-15 04:20:45] 2025-12-15 03:19:54,919 | INFO     | mean y: 2520206.5351681956
[2025-12-15 04:20:45] 2025-12-15 03:19:54,919 | INFO     | intersect: 12645672423.200323
[2025-12-15 04:20:45] 2025-12-15 03:19:54,920 | INFO     | chi2: 0.9858484675232914
[2025-12-15 04:20:45] 2025-12-15 03:19:54,920 | INFO     | current chi2=0.9858484675232914 (change=1.0305867710892405 %)
[2025-12-15 04:20:45] 2025-12-15 03:19:54,920 | INFO     | left removable region: 30
[2025-12-15 04:20:45] 2025-12-15 03:19:54,920 | INFO     | sum of square deviations: 8884603792.5
[2025-12-15 04:20:45] 2025-12-15 03:19:54,928 | INFO     | sum of deviations: -22775912545.500008
[2025-12-15 04:20:45] 2025-12-15 03:19:54,928 | INFO     | mean x: 1765759001.5
[2025-12-15 04:20:45] 2025-12-15 03:19:54,928 | INFO     | mean y: 2516517.133986928
[2025-12-15 04:20:45] 2025-12-15 03:19:54,928 | INFO     | intersect: 4529085572.305887
[2025-12-15 04:20:45] 2025-12-15 03:19:54,929 | INFO     | chi2: 0.12980707550880324
[2025-12-15 04:20:45] 2025-12-15 03:19:54,929 | INFO     | current memory leak: -2.56 B/s (using 306 data points, chi2=0.13)
[2025-12-15 04:20:45] 2025-12-15 03:19:54,930 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2025-12-15 04:20:45] 2025-12-15 03:19:54,930 | INFO     | ..............................
[2025-12-15 04:20:45] 2025-12-15 03:19:54,930 | INFO     | . Timing measurements:
[2025-12-15 04:20:45] 2025-12-15 03:19:54,930 | INFO     | . get job = 0 s
[2025-12-15 04:20:45] 2025-12-15 03:19:54,930 | INFO     | . initial setup = 5 s
[2025-12-15 04:20:45] 2025-12-15 03:19:54,930 | INFO     | . payload setup = 139 s
[2025-12-15 04:20:45] 2025-12-15 03:19:54,930 | INFO     | . stage-in = 0 s
[2025-12-15 04:20:45] 2025-12-15 03:19:54,930 | INFO     | . payload execution = 20968 s
[2025-12-15 04:20:45] 2025-12-15 03:19:54,930 | INFO     | . stage-out = 3 s
[2025-12-15 04:20:45] 2025-12-15 03:19:54,931 | INFO     | . log creation = 1 s
[2025-12-15 04:20:45] 2025-12-15 03:19:54,931 | INFO     | ..............................
[2025-12-15 04:20:45] 2025-12-15 03:19:55,054 | INFO     | 
[2025-12-15 04:20:45] 2025-12-15 03:19:55,055 | INFO     | job summary report
[2025-12-15 04:20:45] 2025-12-15 03:19:55,055 | INFO     | --------------------------------------------------
[2025-12-15 04:20:45] 2025-12-15 03:19:55,055 | INFO     | PanDA job id: 6929334891
[2025-12-15 04:20:45] 2025-12-15 03:19:55,055 | INFO     | task id: 47898763
[2025-12-15 04:20:45] 2025-12-15 03:19:55,055 | INFO     | errors: (none)
[2025-12-15 04:20:45] 2025-12-15 03:19:55,055 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 04:20:45] 2025-12-15 03:19:55,055 | INFO     | pilot state: finished 
[2025-12-15 04:20:45] 2025-12-15 03:19:55,055 | INFO     | transexitcode: 0
[2025-12-15 04:20:45] 2025-12-15 03:19:55,055 | INFO     | exeerrorcode: 0
[2025-12-15 04:20:45] 2025-12-15 03:19:55,056 | INFO     | exeerrordiag: 
[2025-12-15 04:20:45] 2025-12-15 03:19:55,056 | INFO     | exitcode: 0
[2025-12-15 04:20:45] 2025-12-15 03:19:55,056 | INFO     | exitmsg: OK
[2025-12-15 04:20:45] 2025-12-15 03:19:55,056 | INFO     | cpuconsumptiontime: 80676 s
[2025-12-15 04:20:45] 2025-12-15 03:19:55,056 | INFO     | nevents: 400
[2025-12-15 04:20:45] 2025-12-15 03:19:55,056 | INFO     | neventsw: 0
[2025-12-15 04:20:45] 2025-12-15 03:19:55,056 | INFO     | pid: 6618
[2025-12-15 04:20:45] 2025-12-15 03:19:55,056 | INFO     | pgrp: 6618
[2025-12-15 04:20:45] 2025-12-15 03:19:55,056 | INFO     | corecount: 8
[2025-12-15 04:20:45] 2025-12-15 03:19:55,056 | INFO     | event service: False
[2025-12-15 04:20:45] 2025-12-15 03:19:55,057 | INFO     | sizes: {0: 2283125, 1: 2283982, 2: 2284010, 13: 2284010, 23: 2284066, 34: 2284094, 45: 2284250, 56: 2284278, 66: 2284306, 77: 2284334, 88: 2284390, 99: 2284698, 10
[2025-12-15 04:20:45] 2025-12-15 03:19:55,057 | INFO     | --------------------------------------------------
[2025-12-15 04:20:45] 2025-12-15 03:19:55,057 | INFO     | 
[2025-12-15 04:20:45] 2025-12-15 03:19:55,057 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-12-15 04:20:45] 2025-12-15 03:19:55,202 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 04:20:45] 2025-12-15 03:19:55,203 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 04:20:45] 2025-12-15 03:19:55,203 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 04:20:45] 2025-12-15 03:19:55,203 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 04:20:45] 2025-12-15 03:19:55,203 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 04:20:45] 2025-12-15 03:19:55,203 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 04:20:45] 2025-12-15 03:19:55,203 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 04:20:45] 2025-12-15 03:19:55,203 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 04:20:45] 2025-12-15 03:19:55,203 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 04:20:45] 2025-12-15 03:19:55,203 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 04:20:45] 2025-12-15 03:19:55,203 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 04:20:45] 2025-12-15 03:19:55,204 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 04:20:45] 2025-12-15 03:19:55,204 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 04:20:45] 2025-12-15 03:19:55,204 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 04:20:45] 2025-12-15 03:19:55,204 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 04:20:45] 2025-12-15 03:19:55,204 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 04:20:45] 2025-12-15 03:19:55,204 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 04:20:45] 2025-12-15 03:19:55,204 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 04:20:45] 2025-12-15 03:19:55,204 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 04:20:45] 2025-12-15 03:19:55,204 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 04:20:45] 2025-12-15 03:19:55,205 | INFO     | job 6929334891 has completed (purged errors)
[2025-12-15 04:20:45] 2025-12-15 03:19:55,205 | INFO     | overall cleanup function is called
[2025-12-15 04:20:45] 2025-12-15 03:19:56,213 | INFO     | --- collectZombieJob: --- 10, [6618]
[2025-12-15 04:20:45] 2025-12-15 03:19:56,214 | INFO     | zombie collector waiting for pid 6618
[2025-12-15 04:20:45] 2025-12-15 03:19:56,214 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 04:20:45] 2025-12-15 03:19:56,214 | INFO     | collected zombie processes
[2025-12-15 04:20:45] 2025-12-15 03:19:56,214 | INFO     | will attempt to kill all subprocesses of pid=6618
[2025-12-15 04:20:45] 2025-12-15 03:19:56,325 | INFO     | process IDs to be killed: [6618] (in reverse order)
[2025-12-15 04:20:45] 2025-12-15 03:19:56,980 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 04:20:45] 2025-12-15 03:19:56,980 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 04:20:45] 2025-12-15 03:19:56,983 | INFO     | did not find any defunct processes belonging to 6618
[2025-12-15 04:20:45] 2025-12-15 03:19:56,986 | INFO     | did not find any defunct processes belonging to 6618
[2025-12-15 04:20:45] 2025-12-15 03:19:56,987 | INFO     | ready for new job
[2025-12-15 04:20:45] 2025-12-15 03:19:56,987 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 04:20:45] 2025-12-15 03:19:56,989 | INFO     | ***************************************
[2025-12-15 04:20:45] 2025-12-15 03:19:56,989 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 04:20:45] 2025-12-15 03:19:56,989 | INFO     | ***************************************
[2025-12-15 04:20:45] 2025-12-15 03:19:56,989 | INFO     | 
[2025-12-15 04:20:45] 2025-12-15 03:19:56,990 | INFO     | pilot is running in a VM
[2025-12-15 04:20:45] 2025-12-15 03:19:56,990 | INFO     | architecture information:
[2025-12-15 04:20:45] 2025-12-15 03:19:56,993 | INFO     | executing command: cat /etc/os-release
[2025-12-15 04:20:45] 2025-12-15 03:19:57,184 | INFO     | cat /etc/os-release:
[2025-12-15 04:20:45] NAME="CentOS Linux"
[2025-12-15 04:20:45] VERSION="7 (Core)"
[2025-12-15 04:20:45] ID="centos"
[2025-12-15 04:20:45] ID_LIKE="rhel fedora"
[2025-12-15 04:20:45] VERSION_ID="7"
[2025-12-15 04:20:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 04:20:45] ANSI_COLOR="0;31"
[2025-12-15 04:20:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 04:20:45] HOME_URL="https://www.centos.org/"
[2025-12-15 04:20:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 04:20:45] 
[2025-12-15 04:20:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 04:20:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 04:20:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 04:20:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 04:20:45] 
[2025-12-15 04:20:45] 2025-12-15 03:19:57,184 | INFO     | ***************************************
[2025-12-15 04:20:45] 2025-12-15 03:19:57,688 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-12-15 04:20:45] 2025-12-15 03:19:57,958 | INFO     | sufficient remaining disk space (491286167552 B)
[2025-12-15 04:20:45] 2025-12-15 03:19:57,958 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 04:20:45] 2025-12-15 03:19:57,959 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 04:20:45] 2025-12-15 03:19:57,959 | INFO     | update_server=False
[2025-12-15 04:20:45] 2025-12-15 03:19:57,959 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 04:20:45] 2025-12-15 03:19:57,959 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 04:20:45] 2025-12-15 03:19:57,959 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 04:20:45] 2025-12-15 03:19:57,959 | INFO     | aborting loop
[2025-12-15 04:20:45] 2025-12-15 03:19:58,005 | INFO     | all payload control threads have been joined
[2025-12-15 04:20:45] 2025-12-15 03:19:58,197 | INFO     | all data control threads have been joined
[2025-12-15 04:20:45] 2025-12-15 03:19:58,502 | INFO     | all job control threads have been joined
[2025-12-15 04:20:45] 2025-12-15 03:19:58,965 | INFO     | [job] retrieve thread has finished
[2025-12-15 04:20:45] 2025-12-15 03:19:58,965 | INFO     | [job] job monitor thread has finished
[2025-12-15 04:20:45] 2025-12-15 03:19:59,012 | INFO     | [payload] control thread has finished
[2025-12-15 04:20:45] 2025-12-15 03:19:59,094 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 04:20:45] 2025-12-15 03:19:59,204 | INFO     | [data] control thread has finished
[2025-12-15 04:20:45] 2025-12-15 03:19:59,452 | INFO     | [job] validate thread has finished
[2025-12-15 04:20:45] 2025-12-15 03:19:59,457 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 04:20:45] 2025-12-15 03:19:59,509 | INFO     | [job] control thread has finished
[2025-12-15 04:20:45] 2025-12-15 03:19:59,511 | INFO     | [payload] validate_post thread has finished
[2025-12-15 04:20:45] 2025-12-15 03:19:59,550 | INFO     | [data] copytool_in thread has finished
[2025-12-15 04:20:45] 2025-12-15 03:19:59,603 | INFO     | [payload] failed_post thread has finished
[2025-12-15 04:20:45] 2025-12-15 03:19:59,966 | INFO     | [data] copytool_out thread has finished
[2025-12-15 04:20:45] 2025-12-15 03:20:00,069 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 04:20:45] 2025-12-15 03:20:00,101 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 04:20:45] 2025-12-15 03:20:00,370 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 04:20:45] 2025-12-15 03:20:00,461 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 04:20:45] 2025-12-15 03:20:01,075 | INFO     | [job] queue monitor thread has finished
[2025-12-15 04:20:45] 2025-12-15 03:20:03,103 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 04:20:45] 2025-12-15 03:20:26,534 | INFO     | PID=32444 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-15 04:20:45] 2025-12-15 03:20:26,534 | INFO     | .. there are 9 such processes running
[2025-12-15 04:20:45] 2025-12-15 03:20:26,535 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 04:20:45] 2025-12-15 03:20:26,535 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 04:20:45] 2025-12-15 03:20:26,535 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 04:20:45] 2025-12-15 03:20:35,201 | INFO     | [monitor] cgroup control has ended
[2025-12-15 04:20:45] 2025-12-15 03:20:35,844 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139901683447616)>', '<ExcThread(monitor, started 139900976363264)>']
[2025-12-15 04:20:45] 2025-12-15 03:20:36,593 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 04:20:45] 2025-12-15 03:20:36,594 | INFO     | [monitor] control thread has ended
[2025-12-15 04:20:45] 2025-12-15 03:20:40,869 | INFO     | all workflow threads have been joined
[2025-12-15 04:20:45] 2025-12-15 03:20:40,870 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 04:20:45] 2025-12-15 03:20:40,870 | INFO     | traces error code: 0
[2025-12-15 04:20:45] 2025-12-15 03:20:40,870 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 04:20:45] 2025-12-15 03:20:41,218 [wrapper] ==== pilot stdout END ====
[2025-12-15 04:20:45] 2025-12-15 03:20:41,310 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 04:20:45] 2025-12-15 03:20:41,396 [wrapper] pilotpid: 32444
[2025-12-15 04:20:45] 2025-12-15 03:20:41,487 [wrapper] Pilot exit status: 0
[2025-12-15 04:20:45] 2025-12-15 03:20:41,800 [wrapper] pandaids: 6929334891
[2025-12-15 04:20:45] 2025-12-15 03:20:42,272 [wrapper] cleanup supervisor_pilot  7735 32445
[2025-12-15 04:20:45] 2025-12-15 03:20:42,276 [wrapper] Test setup, not cleaning
[2025-12-15 04:20:45] 2025-12-15 03:20:42,312 [wrapper] apfmon messages muted
[2025-12-15 04:20:45] 2025-12-15 03:20:42,389 [wrapper] ==== wrapper stdout END ====
[2025-12-15 04:20:45] 2025-12-15 03:20:42,475 [wrapper] ==== wrapper stderr END ====
[2025-12-15 04:20:45]  *** Error codes and diagnostics ***
[2025-12-15 04:20:45]     "exeErrorCode": 0,
[2025-12-15 04:20:45]     "exeErrorDiag": "",
[2025-12-15 04:20:45]     "pilotErrorCode": 0,
[2025-12-15 04:20:45]     "pilotErrorDiag": "",
[2025-12-15 04:20:45]  *** Listing of results directory ***
[2025-12-15 04:20:45] total 443584
[2025-12-15 04:20:45] -rw-r--r--. 1 boinc boinc    579449 Dec 13 18:18 pilot3.tar.gz
[2025-12-15 04:20:45] -rwx------. 1 boinc boinc     36322 Dec 13 18:20 runpilot2-wrapper.sh
[2025-12-15 04:20:45] -rw-r--r--. 1 boinc boinc      5112 Dec 13 18:21 queuedata.json
[2025-12-15 04:20:45] -rw-r--r--. 1 boinc boinc       100 Dec 14 22:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 04:20:45] -rwxr-xr-x. 1 boinc boinc      7986 Dec 14 22:20 run_atlas
[2025-12-15 04:20:45] -rw-r--r--. 1 boinc boinc       105 Dec 14 22:20 job.xml
[2025-12-15 04:20:45] -rw-r--r--. 1 boinc boinc      6392 Dec 14 22:20 init_data.xml
[2025-12-15 04:20:45] -rw-r--r--. 2 boinc boinc 225792729 Dec 14 22:20 EVNT.47898761._000292.pool.root.1
[2025-12-15 04:20:45] -rw-r--r--. 2 boinc boinc     15847 Dec 14 22:20 start_atlas.sh
[2025-12-15 04:20:45] drwxrwx--x. 2 boinc boinc        68 Dec 14 22:20 shared
[2025-12-15 04:20:45] -rw-r--r--. 2 boinc boinc    592399 Dec 14 22:20 input.tar.gz
[2025-12-15 04:20:45] -rw-r--r--. 1 boinc boinc         0 Dec 14 22:20 boinc_lockfile
[2025-12-15 04:20:45] -rw-r--r--. 1 boinc boinc      2505 Dec 14 22:20 pandaJob.out
[2025-12-15 04:20:45] -rw-------. 1 boinc boinc    991024 Dec 14 22:22 agis_schedconf.cvmfs.json
[2025-12-15 04:20:45] drwx------. 5 boinc boinc      4096 Dec 14 22:22 pilot3
[2025-12-15 04:20:45] -rw-------. 1 boinc boinc 217717579 Dec 15 04:16 HITS.47898763._006050.pool.root.1
[2025-12-15 04:20:45] -rw-r--r--. 1 boinc boinc       531 Dec 15 04:17 boinc_task_state.xml
[2025-12-15 04:20:45] -rw-------. 1 boinc boinc      1021 Dec 15 04:18 memory_monitor_summary.json
[2025-12-15 04:20:45] -rw-------. 1 boinc boinc   1516240 Dec 15 04:18 agis_ddmendpoints.agis.ALL.json
[2025-12-15 04:20:45] -rw-------. 1 boinc boinc    562615 Dec 15 04:18 log.47898763._006050.job.log.tgz.1
[2025-12-15 04:20:45] -rw-------. 1 boinc boinc      7776 Dec 15 04:19 heartbeat.json
[2025-12-15 04:20:45] -rw-------. 1 boinc boinc        95 Dec 15 04:20 pilot_heartbeat.json
[2025-12-15 04:20:45] -rw-r--r--. 1 boinc boinc        28 Dec 15 04:20 wrapper_checkpoint.txt
[2025-12-15 04:20:45] -rw-r--r--. 1 boinc boinc      8192 Dec 15 04:20 boinc_mmap_file
[2025-12-15 04:20:45] -rw-------. 1 boinc boinc      4885 Dec 15 04:20 pilotlog.txt
[2025-12-15 04:20:45] -rw-------. 1 boinc boinc   2845827 Dec 15 04:20 log.47898763._006050.job.log.1
[2025-12-15 04:20:45] -rw-------. 1 boinc boinc       357 Dec 15 04:20 output.list
[2025-12-15 04:20:45] -rw-r--r--. 1 boinc boinc       620 Dec 15 04:20 runtime_log
[2025-12-15 04:20:45] -rw-------. 1 boinc boinc   3430400 Dec 15 04:20 result.tar.gz
[2025-12-15 04:20:45] -rw-r--r--. 1 boinc boinc      8833 Dec 15 04:20 runtime_log.err
[2025-12-15 04:20:45] -rw-------. 1 boinc boinc       658 Dec 15 04:20 dxOLDmSTio8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDuPKDm9UbRvm.diag
[2025-12-15 04:20:45] -rw-r--r--. 1 boinc boinc     20786 Dec 15 04:20 stderr.txt
[2025-12-15 04:20:45] HITS file was successfully produced:
[2025-12-15 04:20:45] -rw-------. 1 boinc boinc 217717579 Dec 15 04:16 shared/HITS.pool.root.1
[2025-12-15 04:20:45]  *** Contents of shared directory: ***
[2025-12-15 04:20:45] total 437068
[2025-12-15 04:20:45] -rw-r--r--. 2 boinc boinc 225792729 Dec 14 22:20 ATLAS.root_0
[2025-12-15 04:20:45] -rw-r--r--. 2 boinc boinc     15847 Dec 14 22:20 start_atlas.sh
[2025-12-15 04:20:45] -rw-r--r--. 2 boinc boinc    592399 Dec 14 22:20 input.tar.gz
[2025-12-15 04:20:45] -rw-------. 1 boinc boinc 217717579 Dec 15 04:16 HITS.pool.root.1
[2025-12-15 04:20:45] -rw-------. 1 boinc boinc   3430400 Dec 15 04:20 result.tar.gz
04:20:46 (28655): run_atlas exited; CPU time 80966.503109
04:20:46 (28655): called boinc_finish(0)

</stderr_txt>
]]>

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